Metagenome / Metatranscriptome Family F093611

Basic Information
Family ID	F093611
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	48 residues
Representative Sequence	REGSSQVGVVQARVREEFTRWFAKGYAAVALRTAPGNRAYLLTPWSDF
Number of Associated Samples	87
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.623 % of family members)
Environment Ontology (ENVO)	Unclassified (37.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.170 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.89% β-sheet: 22.37% Coil/Unstructured: 44.74%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13378	MR_MLE_C	48.11
PF02746	MR_MLE_N	43.40
PF00892	EamA	3.77
PF14559	TPR_19	0.94
PF01694	Rhomboid	0.94
PF05746	DALR_1	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	86.79
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.94
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.94

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.28%
Aquatic	Environmental → Aquatic	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.34%
Freshwater	Environmental → Aquatic → Freshwater	3.77%
Sediment	Environmental → Aquatic → Sediment	0.94%
Cave	Environmental → Terrestrial → Cave	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.62%
Loam	Environmental → Terrestrial → Soil → Loam	4.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_102221841	3300002908	Grasslands Soil	DLERWQREDSSQVGIVQARVREEFEKWFAKGYAAVALRTAPGNRAYLLTPWSDF*
JGI25616J43925_103409761	3300002917	Grasslands Soil	LPAELERWQREDSSQVGAVQARVRDEFTKWFAKGYAAVAFRSAPGNRAYLLAPWSDF*
Ga0066672_103659011	3300005167	Soil	REDSPQVGAVQKRLREEFTKWFAKGYAAVALRTGPGNQAYLLAPWSDF*
Ga0066680_103421151	3300005174	Soil	DVQARLREEFTRWFAKGYAAVALRTAPGNRAYLLAPWSDF*
Ga0066690_104650532	3300005177	Soil	VVQKRLREEFTRWFAKGYAAIALRTGPGNRAYLLAPWSDF*
Ga0066685_103530161	3300005180	Soil	ENAPEIRKVQARMREEFMKWFAKGYAAVGLRTGKGNPAYFLAPWSDF*
Ga0066675_100672333	3300005187	Soil	KVQARLREEFAHWFAKGYAAVALRGGPGSRAYLLAPWSDF*
Ga0008090_144192822	3300005363	Tropical Rainforest Soil	ELEQWQRETAPEIKKVQARLREEFTRWFARGYAAVALRTGPGNRAYCLIPWSDF*
Ga0070697_1015451602	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AVQTEVREEFTKWFARGYAAVAVRAGEKSTEYLLAPWSDF*
Ga0066695_105838632	3300005553	Soil	PEVKKEQARMREEFTKWFAKGYAAVGLRAGPGNRAYLLTPWSDF*
Ga0066706_104241691	3300005598	Soil	QARVREEFARWFAKGYAAVGLRTTGASRAYLLTPWSDF*
Ga0075019_107540971	3300006086	Watersheds	VQARLREEFTKWFAKGYAAVALRTGPGNRAYLLTPWSDF*
Ga0066658_105339511	3300006794	Soil	RWQRENSPQVSVVQARLRNEFTKWFAKGYAAVALRTAPGNRAYLLTPWSDF*
Ga0079220_109958061	3300006806	Agricultural Soil	ELERWQREDSPQVGAVQKRLREEFTKWFAKGYAAFALRSGPGNQAYLLAPWSDF*
Ga0079219_103976572	3300006954	Agricultural Soil	PEVQKVQARMREEFTKWFAKRYAAVGLRTGRGNPAYFLAPWSDF*
Ga0099791_105598732	3300007255	Vadose Zone Soil	RVEMPPDMERWQREGSPEVGKVQARVREEFARWFARGYAAVGLRTTGASRAYLLTPWSDF
Ga0066710_1005754661	3300009012	Grasslands Soil	ELERWQREDSPQVGAVQKRLREEFTKWFAKGYAAVALRTGPGNQAYLLAPWSDF
Ga0099829_107883701	3300009038	Vadose Zone Soil	DSSRVGDVQARLREEFTRWFAKGYAAVALRTAAGNRAYLLTPWSDF*
Ga0099829_117461251	3300009038	Vadose Zone Soil	PQVGVVQARVREEFTRWFARGYAAIAFRTAPGNRAYLLAPWSDF*
Ga0099830_107749812	3300009088	Vadose Zone Soil	EDSSQVGAVQARVREEFTRWFAKGYAAIAFRTAPGNRAYLLAPWSDF*
Ga0099830_116557342	3300009088	Vadose Zone Soil	AVIEMPAELERWQREESPEVGLVQARVREEFTRWFAKGYAAVGLRTGPGSRAYLLAPWSDF*
Ga0099828_107381141	3300009089	Vadose Zone Soil	RWQHEGSSEVGALQARVREEFTRWFAKGYAAVALRTAPGNPAYLLTPWSDF*
Ga0126382_103890252	3300010047	Tropical Forest Soil	ATLERWQQENAPEILTVQARMREEFTKWFAKGYAAIGLRTGKGNPAYFLAPWSDF*
Ga0099796_102998531	3300010159	Vadose Zone Soil	GSPEVGAVQARIRGQFRKWFGKGYAAVALRTAPGSRAYLLTPWSDF*
Ga0134088_103767321	3300010304	Grasslands Soil	WQRENSSQIGDVQARLREEFTRWFAKGYAAVALRTATGNRAYLLAPWSDF*
Ga0134063_100388231	3300010335	Grasslands Soil	ESGQEVQKVQARMREEFTKWFAKGYAAVALRTGPRNRAYCLTPWSDF*
Ga0134063_100970983	3300010335	Grasslands Soil	REEFTKWFAKGYAAVALRTGPGNQAYLLAPWSDF*
Ga0134062_102517601	3300010337	Grasslands Soil	APEIRKVQARMREEFMKWFAKGYAAVGLRTGKGNPAYFLAPWSDF*
Ga0126376_115427732	3300010359	Tropical Forest Soil	PAELERWQSENSPEVGKVQAHLREEFTEWFAKGYAAVGLRAGSSKRAYLLAPWSDF*
Ga0136449_1010011961	3300010379	Peatlands Soil	AVQARLRAEFTKWFAKGYAAVGLRRSPGKPAYLLTPWSDF*
Ga0137392_111980482	3300011269	Vadose Zone Soil	RVREEFTKWFAKGYAAVALRTAGGNRAYLLTPWSDF*
Ga0137393_105333402	3300011271	Vadose Zone Soil	ARVREEFTRWFAKGYAAVALRSGPGNSAYLLAPWSDF*
Ga0137389_105668282	3300012096	Vadose Zone Soil	RWLEESGPEVQKAQAGLREEFTKWFARGYAAVALRIGPGNRAYFLTPWSDF*
Ga0137389_107580421	3300012096	Vadose Zone Soil	AELERWQREESPEVGLVQARVREEFTRWFAKGYAAVGLRTGPGNRAYLLAPWSDF*
Ga0137389_117018852	3300012096	Vadose Zone Soil	RWQREGSSELGVVQDRVREEFTRWFAKGYAAVALRTAPGNPAYLLTPWSDF*
Ga0137388_108161602	3300012189	Vadose Zone Soil	ERWQREDSPQVGVVQARVREEFTRWFARGYAAIAFRTAPGNRAYLLAPWSDF*
Ga0137363_103546762	3300012202	Vadose Zone Soil	IELPPDLERWQREGSPEVGRVQARVREEFARWFAKGYAAVGLRTTGASRAYLLTPWSDF*
Ga0137363_114203051	3300012202	Vadose Zone Soil	AEVGKVQARLREEFTKWFAKGYAAVGLRTSAASRAYLLVPWSDF*
Ga0137399_115456281	3300012203	Vadose Zone Soil	VREEFEKWFAKGYAAVALRTAPGNRAYLLTPWSDF*
Ga0137362_101177591	3300012205	Vadose Zone Soil	VAAVQARVREEFTRWFAKGYAAVALRPGPGNSAYLLAPWSDF*
Ga0137381_105857982	3300012207	Vadose Zone Soil	ELERWQREDSPQVAAVQARVREEFTGWFAKGYAAVGLRTGPGSRAYLLAPWSDF*
Ga0137379_113562052	3300012209	Vadose Zone Soil	GELERWLEENSPEIGKLQARLREEFMMWFAKGYAAVALRTTPGARAYLLTPWSDF*
Ga0137377_109494202	3300012211	Vadose Zone Soil	WQQENAPEIQKVQARMREEFTKWFAKGYAAIGLRTGRGNPAYFLAPWSDF*
Ga0137386_108520632	3300012351	Vadose Zone Soil	GVVQARLREEFTRWFAKGYAAVALRPGSENRAYLLAPWSDF*
Ga0137385_112142842	3300012359	Vadose Zone Soil	ELERWLEENSPEIGKLQARLREEFMMWFAKGYAAVALRTTRGARGYLLTPWSDF*
Ga0137360_100912911	3300012361	Vadose Zone Soil	QVRLREEFTGWFAKGYAAVGLRTTGASKAYLVAPWSDF*
Ga0137360_107122342	3300012361	Vadose Zone Soil	AELERWQREDSSQVGLVQKRLREEFTKWFAKGYAAIALRTGQGNRAYLLAPWSDF*
Ga0137390_1000234511	3300012363	Vadose Zone Soil	PSELERWQREDSSQVGIVQARVREEFTRWFAKGYAAVALRTAPGNRAYLLTPWSDF*
Ga0137390_119757221	3300012363	Vadose Zone Soil	RVREEFTRWFAKGYAAVALRTAPGIPAYLLTPWSDF*
Ga0137398_103603101	3300012683	Vadose Zone Soil	VGVVQARVREEFTKWFAKGYAAVALRTLPGSRAYLLTPWSDF*
Ga0137396_105008672	3300012918	Vadose Zone Soil	WQREGSSQVGIVQARVREEFEKWFAKGYAAVALRTAPGNRAYLLTPWSDF*
Ga0137394_101623431	3300012922	Vadose Zone Soil	VGKVQARLREECTRWFAKGYAAVGLRTTGASRAYLLTPWSDF*
Ga0137394_104053631	3300012922	Vadose Zone Soil	WQREGSPEVGRVQARVREEFARWFAKGYAAVGLRTTGASRAYLLTPWSDF*
Ga0137404_101659923	3300012929	Vadose Zone Soil	SPEVGAVQARVREQFAKWFAKGYAAIALRTGPGSRAYLLTPWSDF*
Ga0126369_115534732	3300012971	Tropical Forest Soil	ERWQQENGPEVKKVQARIREEFTKWFAKGYAAVGLRTGPDSRAYVLTPWSDF*
Ga0137420_10429552	3300015054	Vadose Zone Soil	LEDWQREGSSEVGALQARVRGEFTRWFAKGYAAVGFRTAQGNRAYLLAPWSDF*
Ga0137420_12334951	3300015054	Vadose Zone Soil	PAELDIELPAELERWQREGSSQVGDVQTRVREEFTKWFAKGYAAVALRAAGGNRAYLLTPWSDF*
Ga0137420_13511271	3300015054	Vadose Zone Soil	RALAARSWQREGSSQVGIVQARVREEFEKWFAKGYAAVALRTASGNRAYLLTPWSDF*
Ga0134073_102239981	3300015356	Grasslands Soil	ELERWQREGAREVGVVQARLREEFTRWFAKGYAAVALRPGPENRAYLLAPWSDF*
Ga0187802_100883572	3300017822	Freshwater Sediment	PLVGETQSRIRDEFTKWFAKGYAAVALRTSPGNPAYLLTPWSDF
Ga0187819_101748952	3300017943	Freshwater Sediment	AAIELPADLERLQQEDSPLVGQTQSRIRAEFTKWFAKGYAAVALRTGSGNPAYLLTPWSD
Ga0187817_102111661	3300017955	Freshwater Sediment	RIREEFTKWFAKGYAAVALRTDPRNPAYLLTPWSDF
Ga0187804_101331692	3300018006	Freshwater Sediment	DLERLQQEDSALVGQTQSRIRDEFTKWFAKGYAAVALRTSPGNPAYLLTPWSDF
Ga0066669_100244054	3300018482	Grasslands Soil	ERWQREDSPQVGAVQKRLREEFTKWFAKGYAAVALRTGPGNQAYLLAPWSDF
Ga0179592_100086165	3300020199	Vadose Zone Soil	QREGSSEVGALQARVRGEFTRWFAKGYAAVGFRTAPGNRAYLLAPWSDF
Ga0179592_104757441	3300020199	Vadose Zone Soil	SQAGAVQARVREEFTGWFARGYAAVGLRTAPGKLAYLLTPWSDF
Ga0179596_101528891	3300021086	Vadose Zone Soil	VREEFTRWFARGYAVIAFRTAPGNRAYLLAPWSDF
Ga0179596_106029971	3300021086	Vadose Zone Soil	QTRVREEFTEWFAKGYAAVALRTAGGNRAYLLTPWSDF
Ga0210404_101951071	3300021088	Soil	EGSSLGGIVQARVREEFTRWFDKGYAAIALRTAPGNRAYLLTPWSDF
Ga0210404_105554172	3300021088	Soil	IEMPAELERWQREDSPEVGRVQARIRGEFTSWFAKGYAAIGLRNIPGNRAYLLGPWSDF
Ga0210408_109809131	3300021178	Soil	EVGALQARVRGEFTKWFAKGYAAVGFRTAPGKRAYLLAPWSDF
Ga0210386_102651671	3300021406	Soil	ESWQREGSSQVRAVQARLREEFARWFAKGYAAVALRTAPGNRAYLLTPWSDF
Ga0187846_103962302	3300021476	Biofilm	PTELERWQSEDSPEVGKVQARLREEFTKWFAKGYAAVALRTTPGNRAYLLAPWSDF
Ga0210409_107793501	3300021559	Soil	ELASELERWQREGSPEVGKVQARLREEFTKWFAKGYATVALRTGPGDRAYLLTPWSDF
Ga0210409_110669072	3300021559	Soil	QVGATQTRVREEFTKWFAKGYAAVALRSLPEGWAYLLHPWSDF
Ga0209055_12179971	3300026309	Soil	IELPAELDRWQREGSSQVGIVQARVREEFAKWFAKGYAAVALRTAPGNRAYLLTPWSDF
Ga0209239_13353991	3300026310	Grasslands Soil	ERWQREDSSQVGIVQARVREEFEKWFAKGYAAVALRTAPGNRAYLLTPWSDF
Ga0209761_11708882	3300026313	Grasslands Soil	GADSPEVGKVQTRLREEFTKWFHKGYAAIALRTGPGNRAYLLTPWSDF
Ga0209155_10603963	3300026316	Soil	PQVGAVQKRLREEFTKWFAKGYAAVALRTGPGNQAYLLAPWSDF
Ga0209131_11836572	3300026320	Grasslands Soil	VQARVREEFTKWFARGYAAVAVRAGEKSSEYLLAPWSDF
Ga0209375_12458822	3300026329	Soil	GVPAELEHWQQTNAPEVKKEQARMREEFTKWFAKGYAAVGLRAGPGNRAYLLTPWSDF
Ga0209267_11984711	3300026331	Soil	VQKVQARMREEFTKWFAKGYAAVALRTGPRNRAYCLTPWSDF
Ga0209377_10135181	3300026334	Soil	ERWQREDSPQVGVVQKRLREELTKWFAKGYAAIALRTGQGNRAYLLSPWSDF
Ga0209156_103368762	3300026547	Soil	KVQARLREEFAHWFAKGYAAVALRGGPGSRAYLLAPWSDF
Ga0209474_105928271	3300026550	Soil	TELERWQREDSPQVGAVQKRLREEFTKWFAKGYAAVALRTGPGNQAYLLAPWSDF
Ga0209648_100101558	3300026551	Grasslands Soil	AVIEMPAELDRWQREGSSQVGVVQARLREEFARWFAKGYAAVALRTAPGNRAYLLTPWSD
Ga0209648_101987192	3300026551	Grasslands Soil	WQREDSPQVGVVQARVREEFTRWFAKGYAAIAFRTARGNRAYLLAPWSDF
Ga0209577_107935392	3300026552	Soil	AELQRWQREDSPQVGAVQKRLREEFTKWFAKGYAAVALRTGPGNQAYLLAPWSDF
Ga0209735_10442312	3300027562	Forest Soil	ESFSEVGIAQARIREEFIKWFAKGYAAIALRTVSGNRAYLLTPWSDF
Ga0209177_101659072	3300027775	Agricultural Soil	PEVQKVQARMREEFTKWFAKRYAAVGLRTGRGNPAYFLAPWSDF
Ga0209074_105391572	3300027787	Agricultural Soil	IQEVQARMREEFTKWFAKGYAAVGLRKGKSNAAYFLAPWSDF
Ga0209180_103884532	3300027846	Vadose Zone Soil	SSGVGVVQTRVREEFTKWFAKGYAAVALRTAGGNRAYLLTPWSDF
Ga0209180_106010572	3300027846	Vadose Zone Soil	ARVRDEFTKWFAKGYAAVAFRTAPGNRAYLLAPWSDF
Ga0209180_107487182	3300027846	Vadose Zone Soil	REGSSQVGVVQARVREEFTRWFAKGYAAVALRTAPGNRAYLLTPWSDF
Ga0209693_101486313	3300027855	Soil	VGKVQARLREEFTKWFAKGYAAVALKTGPGNRSYLLAPWSDF
Ga0209283_104902771	3300027875	Vadose Zone Soil	AELERWQREGSSELGVVQDRVREEFTRWFAKGYAAVALRTAPGNPAYLLTPWSDF
Ga0209526_104461851	3300028047	Forest Soil	MPAELDGWQREGSSQVRAVQARVREQFARWFAKGYAAVALRTAPGNRAYLLTPWSDF
Ga0222749_106842692	3300029636	Soil	WQKENPAKVGEVQSRLRGEFTKWFAKGYAAVALRTAPGNRAYLLTPWSDF
Ga0073994_123887892	3300030991	Soil	LERWQREGSSQVGIVQARVREEFSRWFAKGYAAVALRTAPGNRAYLLTPWSDF
Ga0318560_104708771	3300031682	Soil	ENAPEVKKVQSRVREEFTRWFAKGYAAVALRTAPGNRAYCLTPWSDF
Ga0307477_111420671	3300031753	Hardwood Forest Soil	GVVQARVREEFTKWFAKGYAAVGLRTTPGNRAYLLTPWSDF
Ga0307475_103901682	3300031754	Hardwood Forest Soil	VRKVQGRVREEFTKWFAKGYAAVALRTTAGSQAYLLTPWSDF
Ga0307475_104812451	3300031754	Hardwood Forest Soil	SSRIGAVQDRVREEFTRWFAKGYAAVGLRTAAGNRAYLLAPWSDF
Ga0311301_108670821	3300032160	Peatlands Soil	QVSAVQARLRAEFTKWFAKGYAAVGLRRSPGKPAYLLTPWSDF
Ga0307471_1018125371	3300032180	Hardwood Forest Soil	AELEQWQKENAPEIQKVQARMREEFTKWFARGYAAIGLRTGRGNPAYFLVPWSDF
Ga0307472_1008884351	3300032205	Hardwood Forest Soil	VGKVQARLREEFTQWFAKGYAAVGLRTTGASKAYLLTPWSDF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093611

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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