NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F093665

Metagenome / Metatranscriptome Family F093665

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F093665
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 114 residues
Representative Sequence LSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSMMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Number of Associated Samples 84
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 95.28 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (87.736 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(33.019 % of family members)
Environment Ontology (ENVO) Unclassified
(43.396 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.491 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 45.21%    β-sheet: 0.00%    Coil/Unstructured: 54.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00188CAP 27.36
PF13472Lipase_GDSL_2 8.49
PF07883Cupin_2 3.77
PF04324Fer2_BFD 1.89
PF13417GST_N_3 0.94
PF04392ABC_sub_bind 0.94
PF02308MgtC 0.94
PF16694Cytochrome_P460 0.94
PF06742DUF1214 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG2340Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domainCell cycle control, cell division, chromosome partitioning [D] 27.36
COG1285Magnesium uptake protein YhiD/SapB, involved in acid resistanceInorganic ion transport and metabolism [P] 0.94
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.94
COG3174Membrane component of predicted Mg2+ transport system, contains DUF4010 domainInorganic ion transport and metabolism [P] 0.94
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 0.94
COG5402Uncharacterized protein, contains DUF1214 domainFunction unknown [S] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.74 %
UnclassifiedrootN/A12.26 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000597|AF_2010_repII_A1DRAFT_10014129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2195Open in IMG/M
3300004633|Ga0066395_11014170Not Available507Open in IMG/M
3300005161|Ga0066807_1029688All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300005169|Ga0066810_10178381All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005172|Ga0066683_10127928All Organisms → cellular organisms → Bacteria1552Open in IMG/M
3300005332|Ga0066388_101317682All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300005332|Ga0066388_103177472All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium839Open in IMG/M
3300005332|Ga0066388_106561572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium586Open in IMG/M
3300005355|Ga0070671_101952783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria522Open in IMG/M
3300005363|Ga0008090_10184462Not Available501Open in IMG/M
3300005557|Ga0066704_10711395All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005559|Ga0066700_10929853All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005713|Ga0066905_100798511Not Available818Open in IMG/M
3300005713|Ga0066905_100974530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria746Open in IMG/M
3300005713|Ga0066905_102324092All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005764|Ga0066903_103451601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium852Open in IMG/M
3300005764|Ga0066903_106924963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium588Open in IMG/M
3300005764|Ga0066903_107370234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium568Open in IMG/M
3300005764|Ga0066903_108258345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium532Open in IMG/M
3300005764|Ga0066903_108525889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium522Open in IMG/M
3300006755|Ga0079222_12308495Not Available537Open in IMG/M
3300009012|Ga0066710_102845834All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300009094|Ga0111539_11413567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria807Open in IMG/M
3300009147|Ga0114129_11590685All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium800Open in IMG/M
3300010043|Ga0126380_12073956All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300010359|Ga0126376_13025942All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010360|Ga0126372_10363975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1303Open in IMG/M
3300010360|Ga0126372_12340014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium584Open in IMG/M
3300010361|Ga0126378_10174750All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2209Open in IMG/M
3300010362|Ga0126377_12764114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium565Open in IMG/M
3300010366|Ga0126379_12526062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium612Open in IMG/M
3300010376|Ga0126381_101115900All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1139Open in IMG/M
3300010376|Ga0126381_102033220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium828Open in IMG/M
3300010376|Ga0126381_102392788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium758Open in IMG/M
3300010376|Ga0126381_103691049All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium599Open in IMG/M
3300010401|Ga0134121_10968057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria832Open in IMG/M
3300012202|Ga0137363_11205117All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012356|Ga0137371_10924565All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300012951|Ga0164300_10331582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria809Open in IMG/M
3300012957|Ga0164303_10617118All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300012971|Ga0126369_12696234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium581Open in IMG/M
3300012986|Ga0164304_11183281All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300014325|Ga0163163_10176038All Organisms → cellular organisms → Bacteria2186Open in IMG/M
3300014325|Ga0163163_10843931Not Available979Open in IMG/M
3300016270|Ga0182036_10189127All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1500Open in IMG/M
3300016294|Ga0182041_11935435All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300016341|Ga0182035_10834751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium810Open in IMG/M
3300016404|Ga0182037_10190665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1582Open in IMG/M
3300016404|Ga0182037_10735882All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium846Open in IMG/M
3300016404|Ga0182037_11533866Not Available591Open in IMG/M
3300016422|Ga0182039_10345494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1248Open in IMG/M
3300016422|Ga0182039_10356022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1230Open in IMG/M
3300016445|Ga0182038_10338671All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1242Open in IMG/M
3300016445|Ga0182038_11067219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria717Open in IMG/M
3300018067|Ga0184611_1323128Not Available533Open in IMG/M
3300021168|Ga0210406_11324760Not Available517Open in IMG/M
3300022720|Ga0242672_1111486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria549Open in IMG/M
3300025915|Ga0207693_10277975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1312Open in IMG/M
3300025931|Ga0207644_11709679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria527Open in IMG/M
3300026361|Ga0257176_1046401All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300026490|Ga0257153_1062422All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300027882|Ga0209590_10949714Not Available539Open in IMG/M
3300027907|Ga0207428_11266017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria512Open in IMG/M
3300028755|Ga0307316_10056679All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1323Open in IMG/M
3300028787|Ga0307323_10060787All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1338Open in IMG/M
3300028787|Ga0307323_10248171Not Available641Open in IMG/M
3300028796|Ga0307287_10049809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1536Open in IMG/M
3300028802|Ga0307503_10396152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria720Open in IMG/M
3300028810|Ga0307294_10178943All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300031474|Ga0170818_100312849All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300031544|Ga0318534_10050329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2330Open in IMG/M
3300031544|Ga0318534_10172144All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1251Open in IMG/M
3300031544|Ga0318534_10617116All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300031546|Ga0318538_10706318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria547Open in IMG/M
3300031561|Ga0318528_10370749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium769Open in IMG/M
3300031573|Ga0310915_10507542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium856Open in IMG/M
3300031640|Ga0318555_10331961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium823Open in IMG/M
3300031668|Ga0318542_10451017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium667Open in IMG/M
3300031679|Ga0318561_10255086All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium956Open in IMG/M
3300031719|Ga0306917_10380331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1100Open in IMG/M
3300031723|Ga0318493_10204282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1043Open in IMG/M
3300031724|Ga0318500_10098713All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1325Open in IMG/M
3300031736|Ga0318501_10094110All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1485Open in IMG/M
3300031736|Ga0318501_10439558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium707Open in IMG/M
3300031751|Ga0318494_10702289Not Available592Open in IMG/M
3300031770|Ga0318521_10444704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium775Open in IMG/M
3300031778|Ga0318498_10204834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium894Open in IMG/M
3300031780|Ga0318508_1016595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1743Open in IMG/M
3300031798|Ga0318523_10439135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria647Open in IMG/M
3300031845|Ga0318511_10043016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1782Open in IMG/M
3300031846|Ga0318512_10157844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1097Open in IMG/M
3300031879|Ga0306919_10834840All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium707Open in IMG/M
3300031896|Ga0318551_10049497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2113Open in IMG/M
3300031897|Ga0318520_10545173Not Available718Open in IMG/M
3300031910|Ga0306923_10264745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1966Open in IMG/M
3300031941|Ga0310912_10583091All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium870Open in IMG/M
3300031954|Ga0306926_11482879All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria783Open in IMG/M
3300031959|Ga0318530_10210987All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium797Open in IMG/M
3300032001|Ga0306922_11288977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium739Open in IMG/M
3300032044|Ga0318558_10232519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium904Open in IMG/M
3300032052|Ga0318506_10203934All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium873Open in IMG/M
3300032052|Ga0318506_10297517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium715Open in IMG/M
3300032059|Ga0318533_11356086Not Available519Open in IMG/M
3300032060|Ga0318505_10270023All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium801Open in IMG/M
3300032094|Ga0318540_10258617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium840Open in IMG/M
3300033290|Ga0318519_10091338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1621Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil33.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil11.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.49%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.89%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.94%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005161Soil and rhizosphere microbial communities from Laval, Canada - mgLPAEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300022720Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A1DRAFT_1001412913300000597Forest SoilATGTVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTGAQPSAMNRAHALQIAAPLSLRKSPIVLWPGTSRRVREIYPARQSYPRVAVAQSGQDWREDDRHRSLDVSS*
Ga0066395_1101417013300004633Tropical Forest SoilLVETRSEDFSHTLAFGAAIVFGGILIHYLVARGLAAWSDKSRAQQSMTDRAHALPMAVPLFLRKSPSILWSGTSRGVSHIWPFPKPYRRVAVVQSGRDRRDQDRHRSLDVSS*
Ga0066807_102968813300005161SoilGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQMAAPLSLWKSPIVLWSGTSRPVSHICPSQESYPRVAVVQSGQDWCDDDRHRSLDLTS*
Ga0066810_1017838113300005169SoilVFATGTVLSAMGEVVETRSEAFSHEVALGAAMVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQMAAPLSLRKSPIVLWSGTSRPVSHICPSQESYPRVAVVQSGQDWCDDDRHRSLDLTS*
Ga0066683_1012792813300005172SoilETRSEAFSHEVAFGAAIVVGGILVHYLVARGLVAWRDKSRAQQSMMNRAHTLQMAAPLSLRKSPIVLWSGTSRPISYICPSRKSYPRVAVVQSGQDWCDDDRHRSLDLSS*
Ga0066388_10131768213300005332Tropical Forest SoilETGSEDLTHQVAFGAAIVVGGIIIHYLVARGLAAWRDKSRARQSMMNRAHTSRVGSPLSSQKPAIVLWSGTSPPLSPVYSSQESHPRVAEMQSGQDWRDDDRHRSLDLSS*
Ga0066388_10317747223300005332Tropical Forest SoilLVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKSRAQPSMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS*
Ga0066388_10656157223300005332Tropical Forest SoilLVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSLRKSPIVLWSGASRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0070671_10195278313300005355Switchgrass RhizosphereLSAMGEVVETHSEALSHQMAFGIAIVVGGILVHYLVARGLAAWRDKSRVQQSMTNRARALPMAALSTLRKSPSILWSGTSRGVSDIWPSPKSYRRVAVVQAGQDWRADDRRRSLDVSS*
Ga0008090_1018446213300005363Tropical Rainforest SoilVETRAEDFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0066704_1071139513300005557SoilGTVLSAMGEVVETRAEAFSHEVAFGAAIVGGGILMHYLVARGLAVWREQSRAQQSMMNRAHTLRMAAPLSLRKSPIVLWSGTSRPVSQIGPSRKTYPRVAVVQSGQDWCDNHRHRSLDVSS*
Ga0066700_1092985313300005559SoilVLSAMGEVVETRAEAFSHEVAFGAAIVGGGILMHYLVARGLAVWREQSRAQQSMMNRAHTLRMAAPLSLRKSPIVLWSGTSRPVSQIGPSRKTYPRVAVVQSGQDWCDDDRHRSLDLSS*
Ga0066905_10079851123300005713Tropical Forest SoilATGTVLSAMGELVETRSEAFSHEVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAYTLQMVAPLSLRKSPIVFWSGTSRPVSHLWPSRKSYPRVAVVHSGQDWCDDDRHRSLDVSS*
Ga0066905_10097453023300005713Tropical Forest SoilINCLLAPLSECKLAGNHISNSGPNAVLSAMGELVETRSEAFSHEVVFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQMAAPLSLRKSAIVLWSGTSRPVTHICPSRKSYPRVAVMQSGQDWCDDDRHRSLDVSS*
Ga0066905_10232409213300005713Tropical Forest SoilAIVVGGILMHYLVARGLAALRDKSVAQQSMMNRAHTLQMASPLSLRKSPIVLWSGTSRPVSHICPSRKSYPRVAVMQSGQDWCDDDRHRSLDVSS*
Ga0066903_10345160123300005764Tropical Forest SoilRYGLPVFATGTVLSAMSELVETRAEAFSHQLGFGVAIVVVGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPVSLRKSPIVLWSGASRPVSHVYPARQPYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0066903_10692496313300005764Tropical Forest SoilVLSAMGELVETRAEAFSHQLGFGVAIVVGGILMHYLVARGLAAWRDKSRAQPSMMNRAHALQMAAPLSLRKSPIVWWSGASLPVSHIYPARQSYQRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0066903_10737023413300005764Tropical Forest SoilEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSLRKSPIVLWSGASRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0066903_10825834523300005764Tropical Forest SoilLVETRAEDFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKARAQPSAMNRAHALQMAAPLSLRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0066903_10852588923300005764Tropical Forest SoilEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSMANRAHALQMAAPLSLRKSPIVLWSGASRPVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0079222_1230849513300006755Agricultural SoilATGTILSAMGELVETRSEDFSHTLAFGAAIVFGGILMHYLVARGLDAWRDKSRAQQSMANRAHALPTAVPLALRKSPSILWSETSRGVSDIWPLPKSYQRVAVVQSRRDRRDEDRHRSLDVSS*
Ga0066710_10284583413300009012Grasslands SoilSAMGEVVETRSEAFSHEVAFGAAIVVGGILVHYLVARGLVAWRDKSRAQQSMMNRAHTLQMAAPLSLRKSPIVLWSGTSRPISYICPSRKSYPRVAVVQSGQDWCDDDRHRSLDLSS
Ga0111539_1141356723300009094Populus RhizosphereTRSEDFSHTLAFGAAIVFGGILMHYLVARGLAAWRDKSRARQSMTNRAHALPTAAPLALRKSPSISWSETSRAVSDIWPLPKSYQRVAVVPSRRDRRDEDRHRSLDVSS*
Ga0114129_1159068523300009147Populus RhizosphereVFATGTVLSAVGEVMETRSEAFSHEVAFGAAMVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLRMAAPLSSRQSPIVSWSGTSRPVSHICLSRKSYPRVAVVQSGQDWCDDDRHRSLDLSS*
Ga0126380_1207395613300010043Tropical Forest SoilRYGLPVFATGTVLSAMSELVETRSEALSHQVAFGAAIVVVGILMHYLVARGLAARRDQKSMMNRAHAVQMAAPLSLRKSPMVLWSGTSWPISHIRPSPKSYPPVAVVPSGQDWRDNDHHRHRSLDVSS*
Ga0126376_1302594223300010359Tropical Forest SoilVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQMAAPLSLRKSPIVLWSGTSRRVGEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0126372_1036397513300010360Tropical Forest SoilGLPVFATGTVLSAMSELVETRSEALSHELAFGVTIVVGGILMHYLVARGLAAWRDKSRAKQSMMNRAHAVQMAAPLSLRKSPIVLWSGTSWPVSHIRPSPKSYPRVTVVPSGQDWRDNDHHRHRSLDVSS*
Ga0126372_1234001413300010360Tropical Forest SoilLSAMGEVIETRSEAFSHQLGFGVAIVGGGICMHYLVARGLAAWRDRSRAQQSMMNRAHALQIAAPLSLWKSPIVLWSGTSQPVSQIYPARQSYPRVAVVQSRQDWRDDDRHRSLDVSS*
Ga0126378_1017475013300010361Tropical Forest SoilTGTILSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMSRAHAVQMAAPLSLRKSPIVVWSGTSWPVSHIRPSPKSYPRVTVAPSGQDWRDNDHHRHRSLDVSS*
Ga0126377_1276411423300010362Tropical Forest SoilTVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDKSRAQPSMVNRAHGLQMAAPLSLRKSPIVLWSGASLPVSHIYPARQSYPRVAVAQSGQDWCDDDRHRSLDVSS
Ga0126379_1252606223300010366Tropical Forest SoilLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTGAQPSAMNRAHALQIAAPLSLRKSPIVLWPGTSRRVREIYPARQSYPRVAVAQSGQDWREDDRHRSLDVSS*
Ga0126381_10111590013300010376Tropical Forest SoilGRYGLPVFATGTVLSAMSELVETRSEALSHQLAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHAVQMAAPLSLRKSPMVLWSETSWPVSHIRPSPKSYPRVTVVPSGQDWLDNDHHRHRSLDVSS*
Ga0126381_10203322023300010376Tropical Forest SoilELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSLRKSPIVLWSGASRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0126381_10239278823300010376Tropical Forest SoilLPVFATGTVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTGAQPSAMNRAHALQIAAPLSLRKSPIVLWPGTSRRVREIYPARQSYPRVAVAQSGQDWREDDRHRSLDVSS*
Ga0126381_10369104923300010376Tropical Forest SoilMGRYGLPVFATGTVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDKSRAQPSMMNRAHALQMAAPLSLRKSPIVLRSRTSRPVSQIYPARQSYARVAVVRSGQDRFDDDRHRSPTA*
Ga0134121_1096805713300010401Terrestrial SoilHYLVARGLAAWRDKSRVQQGMTNRARALPMAALSTLRKSPSILWSGTSRGVSDIWPSPKSYRRVAVVQAGQDWRADDRRRSLDVSS*
Ga0137363_1120511723300012202Vadose Zone SoilGLPVFATGTVLSAMGEVVETRSEAFSHEVALGAAIVAGGILMHYLVARGLAAWRDKSRARQSMMNRAHTLQMASPLSLRKSPIVLWSGTSRPVSHISPSRKSYPRVAVMQSGQDWYDDDRPRSLDVSS*
Ga0137371_1092456513300012356Vadose Zone SoilSAMGEVVETRSEAFSHEVAFGAAIVVGGILVHYLVARGLVAWRDKSRAQQSMMNRAHTLQMAAPLSLRKSPIVLWSGTSRPISYICPSRKSYPRVAVVQSGQDWCDDDRHRSLDLSS*
Ga0164300_1033158213300012951SoilHQMAFGIAIVVGGILVHYLVARGLAAWRDKSRVQQGMTNRARALPMAALSTLRKSPSILWSGTSRGVSDIWPSPKSYRRVAVVQAGQDWRADDRRRSLDVSS*
Ga0164303_1061711813300012957SoilSAMGEVIETRSEAFNNQVVLGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNWAHTLRMAAPLSLRKSPIVLWSGTSRPVQIGPSRKSYPRVAVVQSEQDWSDNYRHRSLDVSS*
Ga0126369_1269623423300012971Tropical Forest SoilGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSLRKSPIVLWSGASRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS*
Ga0164304_1118328113300012986SoilVAFGAVMVVAGIFMHYLVARGLAAWRDKSRAQQSMMNWAHTLRMAAPLSLRKSPIVLWSGTSRPVQIGPSRKSYPRVAVMQSGQDWYDNHRHRSLDVSS*
Ga0163163_1017603833300014325Switchgrass RhizosphereRYGLPVFATGTVLTAMGEVVETRSEAFSHEVAFGAAIVVGGILVHYLVARGLAAWRDKSRAQQSMMNRAHTLQMAAPLSLRKSPIVLWSGTSRPVSHICPSQESYPRVAVVQSGQDWCDDDRHRSLDLTS*
Ga0163163_1084393113300014325Switchgrass RhizosphereTRSEAFSHEVAFGAAIVVVGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQMAAPLPLRKTPIVLWSGTSRPVSHICPSEESYPPVAVVQSGQDWCDDDCHRSLDLTS*
Ga0182036_1018912713300016270SoilVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAARRDQKSIMNRAHAVQMAAPLSLRKSPIVLWSGTSWPISHIRPSPKSYPPVAVVPSGQDWRDNDHHRHRSLDAPS
Ga0182041_1193543513300016294SoilTAMGEVIETRSEAFNHQVALGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNWAHTLRMAAPLSLRKSPIVLWSGTSRPVQIGPSRKSYPRVAVVQSEQDWCDNHRHRSLDVSS
Ga0182035_1083475113300016341SoilAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0182037_1019066523300016404SoilSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAARRDQKSIMNRAHAVQMAAPLSLRKSPIVLWSGTSWPISHIRPSPKSYPPVAVVPSGQDWRDNDHHRHRSLDAPS
Ga0182037_1073588223300016404SoilFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSMMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0182037_1153386613300016404SoilSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHAVQMAAPLSLRKSPIVLWSETSWPVSHIRPSPKSYPRVTVVPSGQDWLDNDHHRHRSLDLSS
Ga0182039_1034549423300016422SoilETRSEALSHQVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHAVQMAAPLSLRKSPIVLWSETSWPVSHIRPSPKSYPRVTVVPSGQDWLDNDHHRHRSLDLSS
Ga0182039_1035602213300016422SoilAMGEVVETRSEAFTHQLGFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNPAHTLQMAAPLSLRKSAIVLRPGTSRPVSQIYPARQSYARVAVMQSGQDWRDDDRHRSLDVSS
Ga0182038_1033867113300016445SoilTRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKSRAQPRMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS
Ga0182038_1106721923300016445SoilFATGTVLSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAARRDQKSIMNRAHAVQMAAPLSLRKSPIVLWSGTSWPISHIRPSPKSYPPVAVVPSGQDWRDNDHHRHRSLDAPS
Ga0184611_132312823300018067Groundwater SedimentAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNPAHTLQMAAPLSLRKSPIVLWSETSRPVSHICPSQKSYSRVAVVQSGQDWCDDDRHRSLDLSS
Ga0210406_1132476013300021168SoilGIVLSAMGEVIDTRSEAFNDQVALGAAIVGGGILMHYLVARGLAAWRDKSRAQQSMMNWAYTLRMAAPLSLRKSPIVLWSITSRPVQIGPSRKSYPRVAAMQSGQDWSDNHRHRSLDVSS
Ga0242672_111148613300022720SoilTHSEALSHQMAFGIAIVVGGILVHYLVARGLAAWRDKSRVQQSMTNRARALPMAALSTLRKSPSILWSGTSRGVSDIWPSPKSYRRVAVVQAGQDWRADDRRRSLDVSS
Ga0207693_1027797523300025915Corn, Switchgrass And Miscanthus RhizosphereVVETHSEALSHQMAFGIAIVVGGILVHYLVARGLAAWRDKSRVQQSMTNRARALPMAALSTLRKSPSILWSGTSRGVSDIWPSPKSYRRVAVVQAGQDWRADDRRRSLDVSS
Ga0207644_1170967923300025931Switchgrass RhizosphereTVLSAMGEVVETHSEALSHQMAFGIAIVVGGILVHYLVARGLAAWRDKSRVQQSMTNRARALPMAALSTLRKSPSILWSGTSRGVSDIWPSPKSYRRVAVVQAGQDWRADDRRRSLDVSS
Ga0257176_104640133300026361SoilTGTVLSAMGEVVETRSEAFSHDVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMLNRAHTLQMASPLSLRKSAIVLWSGTSRPLSHICPSRKSYPRVAVMQSGQDWCDDDRPRSLDVSS
Ga0257153_106242233300026490SoilVETRSETFSHDVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAYTLQMASPLSLRKSAIVLWSGTSRPLSHICPSRKSYPRVAVMQSGQDWCDDDRPRSLDVSS
Ga0209590_1094971423300027882Vadose Zone SoilMGEVIETRSEAFNHQVALWAAIVSGGILLHYLVARGLAAWRDKSGARQSMMNRAHTLQMASPLSLRKSAIVLWSGTSRPLSHICPSRKSYPSVAVMQSGQDWCDDDRPRSLDVSS
Ga0207428_1126601713300027907Populus RhizosphereVHYLVARGLAAWRDKSRVQQSMTNRARALPMAALSTLRKSPSILWSGTSRGVSDIWPSPKSYRRVAVVQAGQDWRADDRRRSLDVSS
Ga0307316_1005667933300028755SoilSAMGEVVETRSEAFSHEVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNPAHTLQMAAPLSLRKSPIVLWSETSRPVSHICPSQKSYSRVAVVQSGQDWCDDDRHRSLDLSS
Ga0307323_1006078733300028787SoilFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNPAHTLQMAAPLSLRKSPIVLWSETSRPVSHICPSQKSYSRVAVVQSGQDWCDDDRHRSLDLSS
Ga0307323_1024817113300028787SoilGIPTLCLIGRYGLRVFATGTVLSAMGEVVETRSEAFSHEAAASLCILSSPAARAQQSMNRAHTLQMAAPLSSRKSPIVLWSGTSRPVGHICPSQESYPRVAVMQSGQGWCDDDRHRLWGR
Ga0307287_1004980933300028796SoilSAMGEVVETRSEAFSHDVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNPAHTLQMAAPLSLRKSPIVLWSETSRPVSHICPSQKSYSRVAVVQSGQDWCDDDRHRSLDLSS
Ga0307503_1039615223300028802SoilSHDVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQMAAPLSLWKSPIVLWSGTSRPVSHICPSQESYPRVAVVQSGQDWRDDDRHRSLDLTS
Ga0307294_1017894323300028810SoilETRSEAFSHEVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQMAAPLSLRKSPIVLWSGTSRPVSHICPSQESYPRVAVVQSGQDWCDDDRHRSLDLTS
Ga0170818_10031284913300031474Forest SoilVLSAMGEVVETRSEAFSHDVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAYTLQIASPLSLRKSAIVLWSGTSRPLSHICPSRKSYPRDSDAVRTRLV
Ga0318534_1005032943300031544SoilTVLSAMGELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDRSRAQQRMMNRAHTVQMDAPLSLRKSPIVLWSGTSRPVGQTYPARQSCPRVAVVQSGQDWCDDDRHRSLDVSS
Ga0318534_1017214433300031544SoilGTVLSAMSELVETRAEAFSHQLGFGVAIVVGGILMHYLVARGLAAWRDKSRAQPSMMNRAHALQMAAPLSLRKSPIVLRPGTSRPVSQIYPARQSYARVAVVRSGQDWRDDDRHRSLDVS
Ga0318534_1061711613300031544SoilGTVLSAMAELVETRSEALSHQVAFGAAIVLGGILIHYLVARGLAAWRDKSRAQQSMMNRAQALPMAAPLSLRKSPIVSWSGTGWPVSHIRPSPKSYPRVAVVPSGQGWRDNDRHRHRSLDVSS
Ga0318538_1070631823300031546SoilLVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDRSRAQQRMMNRAHTVQMDAPLSLRKSPIVLWSGTSRPVGQTYPARQSCPRVAVVQSGQDWCDDDRHRSLDVSSQRGVFAQPLRPQAGR
Ga0318528_1037074913300031561SoilRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0310915_1050754223300031573SoilRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSMMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318555_1033196113300031640SoilGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318542_1045101723300031668SoilVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318561_1025508623300031679SoilGFGVAIVVGGIWMHYLVARGLAAWKDKTRAQPSMMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0306917_1038033133300031719SoilLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSMMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318493_1020428223300031723SoilGRYGLPVFATGTVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKSRAQPSMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS
Ga0318500_1009871313300031724SoilRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKSRAQPRMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS
Ga0318501_1009411033300031736SoilTVLSAMSELVETRAEAFSHQLGFGVAIVVGGILMHYLVARGLAAWRDKSRAQPSMMNRAHALQMAAPLSLRKSPIVLRPGTSRPVSQIYPARQSYARVAVVRSGQDWRDDDRHRSLDVSS
Ga0318501_1043955813300031736SoilVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDRSRAQQRMMNRAHTVQMDAPLSLRKSPIVLWSGTSRPVGQTYPARQSCPRVAVVQSGQDWCDDDRHRSLDVSS
Ga0318494_1070228913300031751SoilALSHEVAFGAAIVGGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQTAAPLSLRKSATVLWPGTSPPISPIFPSQKSHPSVAVMQSGQDWCDDDRRRSLDVSS
Ga0318521_1044470423300031770SoilYGLPVFATGTVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKSRAQPSMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS
Ga0318498_1020483413300031778SoilHYLVARGLAAWKDKSRAQPSMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS
Ga0318508_101659543300031780SoilVLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKSRAQPSMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS
Ga0318523_1043913523300031798SoilLSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHAVQMAAPLSLRKSPIVLWSETSWPVSHIRPSPKSYPRVTVVPSGQDWLDNDHHRHRSLDLSS
Ga0318511_1004301643300031845SoilLSAMSELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSMMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318512_1015784423300031846SoilILSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAARRDQKSIMNRAHAVQMAAPLSLRKSPIVLWSGTSWPISHIRPSPKSYPPVAVVPSGQDWRDNDHHRHRSLDAPS
Ga0306919_1083484023300031879SoilGRYGLPVFATGTVLSAMGELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDRSRAQQRMMNRAHTVQMDAPLSLRKSPIVLWSGTSRPVGQTYPARQSCPRVAVVQSGQDWCDDDRHRSLDVSS
Ga0318551_1004949743300031896SoilELVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318520_1054517313300031897SoilGTVLSAMTELVETRSEALSHEVAFGAAIVGGGILMHYLVARGLAAWRDKSRAQQSMMNRAHTLQTAAPLSLRKSATVLWSGTSPPISPIFPSQKSHPSVAVMQSGQDWCDDDRRRSLDVS
Ga0306923_1026474513300031910SoilLSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAARRDQKSIMNRAHAVQMAAPLSLRKSPIVLWSGTSWPISHIRPSPKSYPPVAVVPSGQDWRDNDHHRHRSLDAPS
Ga0310912_1058309113300031941SoilQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0306926_1148287923300031954SoilFATGTVLSAMSELVETRSEALSHQVAFGAAIVVGGILMHYLVARGLAAWRDKSRAQQSMMNRAHAVQMAAPLSLRKSPIVLWSETSWPVSHIRPSPKSYPRVTVVPSGQDWLDNDHHRHRSLDLSS
Ga0318530_1021098723300031959SoilAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSMMNRAHALQMAAPLSWRKSPIVLWSGTSRRVSEIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0306922_1128897723300032001SoilLVETRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDRSRAQQRMMNRAHTVQMDAPLSLRKSPIVLWSGTSRPVGQTYPARQSCPRVAVVQSGQDWCDDDRHRSLDVSS
Ga0318558_1023251923300032044SoilRAEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKSRAQPSMVNRTPALQMAAPLSLRKSPIVLWSAASRRVSEIYPARQSYARVAVAQSGQDWRDDDRHRSLDVSS
Ga0318506_1020393423300032052SoilVPVAKTGTVLSAMGEVVETRSEAFSHQLGFGVAIVVGGICMHYLVARGLAAWRDRSRIRQSTMNRAHALQMAAPLSLRKSPIVLWSGTSRPVSQINPARQSYARVAVVQSRQDWRDDDRHRSLDVSS
Ga0318506_1029751713300032052SoilLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318533_1135608613300032059SoilGTVLSAMAELVETRSEALSHQVAFGAAIVVGGICMHYLVARGLAAWRDKSRMQPSMMNRAQALPMAAPLSLRKSPIVSWSGTGWPVSHIRPSPKSYPRVAVVPSGQGWRDNDRHRHRSLDVSS
Ga0318505_1027002323300032060SoilGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318540_1025861723300032094SoilEAFSHQLGFGVAIVVGGICMHYLVARGLAAWKDKTRAQPSAMNRAHALQIAAPLSWRKSPIVLWSGTSRRVSQIYPARQSYPRVAVAQSGQDWRDDDRHRSLDVSS
Ga0318519_1009133813300033290SoilGTVLSAMAELVETRSEALSHQVAFGAAIVLGGILIHYLVARGLAAWRDKSRAQQSMMNRAQALQMAAPLSLRKSPIVSWSGTGWPVSHIRPSPKSYPRVAVVPSGQGWRDNDRHRHRSLDVSS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.