Metagenome / Metatranscriptome Family F093738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093738
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	45 residues
Representative Sequence	MMYNDTKIKISIPFHEDLFLRSSLSIDMWTEDYYELLELIGDDYE
Number of Associated Samples	67
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	51.89 %
% of genes near scaffold ends (potentially truncated)	22.64 %
% of genes from short scaffolds (< 2000 bps)	83.96 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (33.019 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (40.566 % of family members)
Environment Ontology (ENVO)	Unclassified (69.811 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.88% β-sheet: 5.48% Coil/Unstructured: 61.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13619	KTSC	3.77
PF00589	Phage_integrase	1.89
PF14700	RPOL_N	1.89
PF02511	Thy1	0.94
PF00145	DNA_methylase	0.94
PF12705	PDDEXK_1	0.94
PF04724	Glyco_transf_17	0.94
PF01503	PRA-PH	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.94
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.58 %
Unclassified	root	N/A	26.42 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	59.43 %
Unclassified	root	N/A	26.42 %
cellular organisms	root	All Organisms → cellular organisms	14.15 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	33.02 %
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.15 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	33.02 %
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.43 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	33.02 %
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.83 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1.89 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	33.02 %
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	4.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.83 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1.89 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	32.08 %
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
Gammaproteobacteria bacterium TMED234	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	4.72 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.83 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1.89 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.94 %

Name	Rank	Taxonomy	Distribution
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	31.13 %
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
Gammaproteobacteria bacterium TMED234	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	4.72 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	2.83 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1.89 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
Sednavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus	9.43 %
Kajamvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus	5.66 %
Ashivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus	4.72 %
Gammaproteobacteria bacterium TMED234	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	4.72 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.83 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1.89 %
unclassified Autographiviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae	0.94 %
Powvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Powvirus	0.94 %
Poseidonvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus	0.94 %
Pekhitvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pekhitvirus	0.94 %
Igirivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Igirivirus	0.94 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	23.58 %
Synechococcus virus SRIP2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	9.43 %
Synechococcus virus SRIP1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	5.66 %
Ashivirus S45C4	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus → Ashivirus S45C4	4.72 %
Gammaproteobacteria bacterium TMED234	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	4.72 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2.83 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1.89 %
Synechococcus virus SCBP4	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	0.94 %
Synechococcus phage S-SRP01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	0.94 %
Pekhitvirus S04C24	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pekhitvirus → Pekhitvirus S04C24	0.94 %
Powvirus S08C41	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Powvirus → Powvirus S08C41	0.94 %
Igirivirus STIP37	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Igirivirus → Igirivirus STIP37	0.94 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001833\|ACM24_1070427	Not Available	918	Open in IMG/M
3300001944\|GOS2251_1002982	All Organisms → Viruses → Predicted Viral	1919	Open in IMG/M
3300001944\|GOS2251_1034588	All Organisms → Viruses → Predicted Viral	1621	Open in IMG/M
3300001955\|GOS2237_1006496	Not Available	821	Open in IMG/M
3300002231\|KVRMV2_100343244	Not Available	526	Open in IMG/M
3300005512\|Ga0074648_1006001	Not Available	9152	Open in IMG/M
3300005512\|Ga0074648_1040733	All Organisms → Viruses → Predicted Viral	2161	Open in IMG/M
3300005512\|Ga0074648_1199488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	559	Open in IMG/M
3300006025\|Ga0075474_10140741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	761	Open in IMG/M
3300006734\|Ga0098073_1016814	All Organisms → Viruses → Predicted Viral	1136	Open in IMG/M
3300006734\|Ga0098073_1021607	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	959	Open in IMG/M
3300006790\|Ga0098074_1137179	Not Available	632	Open in IMG/M
3300006790\|Ga0098074_1179401	Not Available	532	Open in IMG/M
3300006802\|Ga0070749_10111670	All Organisms → Viruses → Predicted Viral	1610	Open in IMG/M
3300006802\|Ga0070749_10294827	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	910	Open in IMG/M
3300006802\|Ga0070749_10532665	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	638	Open in IMG/M
3300006810\|Ga0070754_10106590	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	1378	Open in IMG/M
3300006810\|Ga0070754_10200489	All Organisms → Viruses	930	Open in IMG/M
3300006810\|Ga0070754_10386665	Not Available	614	Open in IMG/M
3300006810\|Ga0070754_10488785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	531	Open in IMG/M
3300006870\|Ga0075479_10318234	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Poseidonvirus → Synechococcus virus SCBP4	608	Open in IMG/M
3300006919\|Ga0070746_10049457	All Organisms → Viruses → Predicted Viral	2197	Open in IMG/M
3300006919\|Ga0070746_10404216	Not Available	611	Open in IMG/M
3300006919\|Ga0070746_10413966	Not Available	602	Open in IMG/M
3300007344\|Ga0070745_1182996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	781	Open in IMG/M
3300007344\|Ga0070745_1284794	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus → Ashivirus S45C4	591	Open in IMG/M
3300007345\|Ga0070752_1050841	All Organisms → Viruses → Predicted Viral	1903	Open in IMG/M
3300007345\|Ga0070752_1061623	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	1685	Open in IMG/M
3300007346\|Ga0070753_1100007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	1133	Open in IMG/M
3300007346\|Ga0070753_1341732	Not Available	529	Open in IMG/M
3300007539\|Ga0099849_1006888	Not Available	5154	Open in IMG/M
3300007539\|Ga0099849_1117810	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300007539\|Ga0099849_1211883	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	725	Open in IMG/M
3300007539\|Ga0099849_1228778	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Igirivirus → Igirivirus STIP37	690	Open in IMG/M
3300007539\|Ga0099849_1333340	Not Available	542	Open in IMG/M
3300007640\|Ga0070751_1382934	Not Available	509	Open in IMG/M
3300009216\|Ga0103842_1022069	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	660	Open in IMG/M
3300009593\|Ga0115011_10023819	All Organisms → Viruses → Predicted Viral	4093	Open in IMG/M
3300009703\|Ga0114933_10591838	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus → Ashivirus S45C4	715	Open in IMG/M
3300009790\|Ga0115012_10025987	All Organisms → Viruses → Predicted Viral	3745	Open in IMG/M
3300009790\|Ga0115012_11289677	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	618	Open in IMG/M
3300010296\|Ga0129348_1033069	All Organisms → Viruses → Predicted Viral	1881	Open in IMG/M
3300010296\|Ga0129348_1120615	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	917	Open in IMG/M
3300010297\|Ga0129345_1229065	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	653	Open in IMG/M
3300010300\|Ga0129351_1399302	Not Available	513	Open in IMG/M
3300012920\|Ga0160423_10408282	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300012920\|Ga0160423_10654575	Not Available	710	Open in IMG/M
3300013195\|Ga0116815_1031326	Not Available	710	Open in IMG/M
3300013230\|Ga0116814_1006185	All Organisms → Viruses → Predicted Viral	1208	Open in IMG/M
3300013230\|Ga0116814_1033131	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pekhitvirus → Pekhitvirus S04C24	633	Open in IMG/M
3300014030\|Ga0116816_1014017	Not Available	838	Open in IMG/M
3300017725\|Ga0181398_1088082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Powvirus → Powvirus S08C41	742	Open in IMG/M
3300017738\|Ga0181428_1061180	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus → Ashivirus S45C4	878	Open in IMG/M
3300017818\|Ga0181565_10534006	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	759	Open in IMG/M
3300017951\|Ga0181577_10148063	All Organisms → Viruses → Predicted Viral	1598	Open in IMG/M
3300017951\|Ga0181577_10157082	Not Available	1544	Open in IMG/M
3300017951\|Ga0181577_10546032	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	720	Open in IMG/M
3300017951\|Ga0181577_10677085	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	630	Open in IMG/M
3300017951\|Ga0181577_10970275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	502	Open in IMG/M
3300017956\|Ga0181580_10798477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	594	Open in IMG/M
3300017958\|Ga0181582_10641274	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	645	Open in IMG/M
3300017967\|Ga0181590_10310158	All Organisms → Viruses → Predicted Viral	1145	Open in IMG/M
3300017969\|Ga0181585_10899374	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	568	Open in IMG/M
3300018421\|Ga0181592_10199972	All Organisms → Viruses → Predicted Viral	1494	Open in IMG/M
3300018421\|Ga0181592_10540867	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → unclassified Autographiviridae → Synechococcus phage S-SRP01	799	Open in IMG/M
3300018421\|Ga0181592_10743099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	651	Open in IMG/M
3300018423\|Ga0181593_10497347	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	893	Open in IMG/M
3300019765\|Ga0194024_1046448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	959	Open in IMG/M
3300020252\|Ga0211696_1000547	All Organisms → cellular organisms → Bacteria	4748	Open in IMG/M
3300020371\|Ga0211500_1030106	All Organisms → Viruses → Predicted Viral	1747	Open in IMG/M
3300020417\|Ga0211528_10022989	All Organisms → Viruses → Predicted Viral	3065	Open in IMG/M
3300020438\|Ga0211576_10001883	All Organisms → Viruses	15516	Open in IMG/M
3300020442\|Ga0211559_10096113	All Organisms → Viruses → Predicted Viral	1429	Open in IMG/M
3300020442\|Ga0211559_10098037	Not Available	1413	Open in IMG/M
3300020442\|Ga0211559_10142237	All Organisms → Viruses → Predicted Viral	1145	Open in IMG/M
3300020463\|Ga0211676_10011169	Not Available	7653	Open in IMG/M
3300021356\|Ga0213858_10011939	All Organisms → Viruses → Predicted Viral	4105	Open in IMG/M
3300021356\|Ga0213858_10352052	Not Available	696	Open in IMG/M
3300021368\|Ga0213860_10352803	Not Available	640	Open in IMG/M
3300021958\|Ga0222718_10320477	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	798	Open in IMG/M
3300021961\|Ga0222714_10386264	Not Available	743	Open in IMG/M
3300022069\|Ga0212026_1064277	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	556	Open in IMG/M
3300022158\|Ga0196897_1031871	Not Available	635	Open in IMG/M
3300022187\|Ga0196899_1083655	Not Available	972	Open in IMG/M
3300022187\|Ga0196899_1116249	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	775	Open in IMG/M
3300023180\|Ga0255768_10428931	All Organisms → Viruses	691	Open in IMG/M
3300025093\|Ga0208794_1002685	Not Available	6534	Open in IMG/M
3300025093\|Ga0208794_1035635	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	955	Open in IMG/M
3300025132\|Ga0209232_1137784	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300025543\|Ga0208303_1000166	All Organisms → cellular organisms → Bacteria	27327	Open in IMG/M
3300025671\|Ga0208898_1013531	All Organisms → cellular organisms → Bacteria	3919	Open in IMG/M
3300025671\|Ga0208898_1023006	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Kajamvirus → Synechococcus virus SRIP1	2701	Open in IMG/M
3300025671\|Ga0208898_1153704	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Sednavirus → Synechococcus virus SRIP2	618	Open in IMG/M
3300025671\|Ga0208898_1173506	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus → Ashivirus S45C4	553	Open in IMG/M
3300025674\|Ga0208162_1050318	All Organisms → Viruses → Predicted Viral	1402	Open in IMG/M
3300025674\|Ga0208162_1077693	All Organisms → Viruses → Predicted Viral	1034	Open in IMG/M
3300025751\|Ga0208150_1103071	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	932	Open in IMG/M
3300025759\|Ga0208899_1122651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	931	Open in IMG/M
3300025759\|Ga0208899_1141226	Not Available	837	Open in IMG/M
3300025769\|Ga0208767_1047347	All Organisms → Viruses → Predicted Viral	2040	Open in IMG/M
3300025828\|Ga0208547_1167262	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	615	Open in IMG/M
3300025840\|Ga0208917_1128669	Not Available	899	Open in IMG/M
3300025853\|Ga0208645_1168705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED234	810	Open in IMG/M
3300025889\|Ga0208644_1076959	All Organisms → Viruses → Predicted Viral	1724	Open in IMG/M
3300027906\|Ga0209404_10644943	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Ashivirus → Ashivirus S45C4	711	Open in IMG/M
3300029448\|Ga0183755_1011653	All Organisms → Viruses → Predicted Viral	3394	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.28%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.83%
Freshwater	Environmental → Aquatic → Freshwater	1.89%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	47.17%
Oceanic	Environmental → Aquatic → Marine → Oceanic	16.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.38%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.83%
Strait	Environmental → Aquatic → Marine → Strait	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.94%
River	Environmental → Aquatic → Freshwater → River	0.94%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.94%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	47.17%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	15.09%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	14.15%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.38%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.83%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	2.83%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.89%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.94%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.94%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	40.57%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	14.15%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	14.15%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.49%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.77%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.83%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.83%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	2.83%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.89%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.89%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.94%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.94%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.94%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.94%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001833	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM24, ROCA_DNA012_0.2um_2l	Environmental	Open in IMG/M
3300001944	Marine microbial communities from Cabo Marshall, Isabella Island, Equador - GS036	Environmental	Open in IMG/M
3300001955	Marine microbial communities from Gulf of Panama, Panama - GS021	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300009216	Microbial communities of water from the North Atlantic ocean - ACM47	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300013195	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_Metagenome	Environmental	Open in IMG/M
3300013230	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station5_GOM_Metagenome	Environmental	Open in IMG/M
3300014030	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 11m_Station1_GOM_Metagenome	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020252	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_078 - TARA_B100000524 (ERX555968-ERR599022)	Environmental	Open in IMG/M
3300020371	Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555978-ERR598991)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022069	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025093	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025828	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACM24_10704274	3300001833	Marine Plankton	MMYNDTKIKVAVPFHEDLFCCAGAGSLSIDMWTSDYYELLELIGDDYE*
GOS2251_10029821	3300001944	Marine	MMYNDTKIKISIPFHEDLFLRSSLSIDMWTEDYYQLLELIGDDYE*
GOS2251_10345882	3300001944	Marine	MMYNDTKIKISIPFHEDLFLRSSLSIDMWTEDYYELLELIGDDYE*
GOS2237_10064962	3300001955	Marine	MMYNNTKVQISVPFHEDLFLSSYLSTEMWTEDYYELLELIGDDYE*
KVRMV2_1003432443	3300002231	Marine Sediment	MMYNNTKIKIAVPFHEDLFCCPNAGSLSIDMWTSDYYELLELIGDDYE*
Ga0074648_100600111	3300005512	Saline Water And Sediment	MYYNDTKIKIAVPFHEDLFCCPGAGSLSIDMWTSDYYELLELIGDDYE*
Ga0074648_10407332	3300005512	Saline Water And Sediment	MYYNNTKIKIAVPFHEDLFCCPNAGSLSIDMWTSDYYELLELIGDDYE*
Ga0074648_11994882	3300005512	Saline Water And Sediment	MYYNNTKIKIAVPFHEDLFCCPKSGSQSIDMWTSDYYELLELIGDDYE*
Ga0075474_101407413	3300006025	Aqueous	MMYNDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLELIGDDYE*
Ga0098073_10168143	3300006734	Marine	LIPMMYNNTKVQIAVPFHEDLFCCPDAGSLSIDMWTSDYYELLELIGDDYE*
Ga0098073_10216072	3300006734	Marine	MMYNNTKVPISIPFHEDLYLTNAINTWIWQQDYYELLELIGDDYE*
Ga0098074_11371793	3300006790	Marine	MMYNNTKVQISVPFHEDLFTCPKSGSLSIDMWTDDYYELLEIIGDDYE*
Ga0098074_11794012	3300006790	Marine	LIPMMYNNTKVQIAVPFHEDLFCCPKSGSLSIDMWTSDYYELLELIGDEYE*
Ga0070749_101116702	3300006802	Aqueous	MNYNDNRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE*
Ga0070749_102948272	3300006802	Aqueous	MMYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIADDYE*
Ga0070749_105326653	3300006802	Aqueous	MKYNNTKIEIQLPFHEGLFCNSTLAVDMWTEDYYELLSIIGDDYE*
Ga0070754_101065902	3300006810	Aqueous	MMYNNTKIEIQLPFHEGLFCDSTLAIDMWTENYYELLSIIGDDYE*
Ga0070754_102004892	3300006810	Aqueous	MLYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIGDDYE*
Ga0070754_103866652	3300006810	Aqueous	MTYNDNRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE*
Ga0070754_104887851	3300006810	Aqueous	MMYNNTKIQIELPFHEGLFCSSTLAIDMWTEDYYELLSIIEDDYE*
Ga0075479_103182343	3300006870	Aqueous	QLMMYNDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLELIGDDYE*
Ga0070746_100494574	3300006919	Aqueous	MYNDTKIKIAVPFHEDLFCCPGAGSLSIDMWTSDYYELLELIGDDYE*
Ga0070746_104042161	3300006919	Aqueous	LIPMMYNNTKVQIAVPFHEDLFCCPKSGSLSIDMWTSDYYELLELIGDDYE*
Ga0070746_104139661	3300006919	Aqueous	MMYNDTKIKIAVPFHEDLFCCPGAGSLSIDMWTSDYYELLELIGD
Ga0070745_11829962	3300007344	Aqueous	MNYNDTKFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE*
Ga0070745_12847943	3300007344	Aqueous	MYNNTKIEIYVPHHEALFCSSTLAIDMWSEDYYELLSIIGDDYE*
Ga0070752_10508416	3300007345	Aqueous	IMNYNDNRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE*
Ga0070752_10616232	3300007345	Aqueous	MYNNTKIEIQLPFHEGLFCDSTLAIDMWTENYYELLSIIGDDYE*
Ga0070753_11000072	3300007346	Aqueous	MNYNDTKIKISIPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE*
Ga0070753_13417323	3300007346	Aqueous	MISIPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE*
Ga0099849_10068883	3300007539	Aqueous	MLYNDTKVRVSVPFHEDLFGGSSLSIDMWTEDFYELLEQIGDDNEESF*
Ga0099849_11178103	3300007539	Aqueous	MLYNNTKVPISIPFHEDLYCSSWLAIEMWTEHYYELLELIGDDYE*
Ga0099849_12118833	3300007539	Aqueous	MKYNNTKIKIQFPFHEGLFCDSTLAVDMWTEEYYELLSIIGDDYE*
Ga0099849_12287781	3300007539	Aqueous	MMYNDTKVKISIPFHEDLFLRSSLSIDMWTEDYYELLELIGDDYE*
Ga0099849_13333403	3300007539	Aqueous	MMYNDTKIKIAIPFHENLFCDSYLATEMWNKDYYELLELIGDDYE*
Ga0070751_13829341	3300007640	Aqueous	RFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE*
Ga0103842_10220692	3300009216	River Water	MMYNDTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIGDDYE*
Ga0115011_100238198	3300009593	Marine	MMYNNTKVQIAVPFHEDLFCCPNAGSLSIDMWTSDYYELLELIGDDYE*
Ga0114933_105918382	3300009703	Deep Subsurface	MMYNNTKIKISLPFHEDLFCCPNAGSLSIDMWTSSYYELLELIGDDYE*
Ga0115012_100259879	3300009790	Marine	MYSNDTKFQISIPFHEDLFCSSTLSIDMWTEDYYELLELIGDDDAN*
Ga0115012_112896771	3300009790	Marine	MYYNNTKFQISVPFHEDLFGSSTLAIDMWTEDYYELLELIGDDYAY*
Ga0129348_10330694	3300010296	Freshwater To Marine Saline Gradient	MYNDTKIKISIPFHEDLFLRSSLSIDMWTSDYYELLELIGDDYE*
Ga0129348_11206154	3300010296	Freshwater To Marine Saline Gradient	TKIKIQFPFHEGLFCDSTLAVDMWTEEYYELLSIIGDDYE*
Ga0129345_12290651	3300010297	Freshwater To Marine Saline Gradient	MKYNNTKIEIQLPFHEGLFCDSTLAVDMWTENYYELL
Ga0129351_13993022	3300010300	Freshwater To Marine Saline Gradient	FHEDLFGGSSLSIDMWTEDFYELLEQIGDDNEESF*
Ga0160423_104082822	3300012920	Surface Seawater	MMYNNTKVQISVPFHEDLFGQSTLSIDMWTSDFYELLEQIGDDYE*
Ga0160423_106545752	3300012920	Surface Seawater	MIMYYNDTKIKISIPFHEDLFLRSTLSVDMWTEDYYELLELIGDDYE*
Ga0116815_10313261	3300013195	Marine	GGIRLMYYNDTKIKIAVPFHEDLFCCAGAGSLSIDMWTSDYYELLELIGDDYE*
Ga0116814_10061854	3300013230	Marine	MYYNDTKIKIAVPFHEDLFCCAGAGSLSIDMWTSDYYELLELIGDDYE*
Ga0116814_10331312	3300013230	Marine	MMYNDTKIKISVPFHEDLFLRSSLSIDMWTEDYYELLEIIGDDYE*
Ga0116816_10140173	3300014030	Marine	MYYNDTKIKIAVPFHEDLFCCPNAGSLSIDMWTSDYYELLELIGDDYE*
Ga0181398_10880822	3300017725	Seawater	MMYNDTKVLISVPFHEDLFGQCPLSIDMWTSDYYELLEQIADDYE
Ga0181428_10611802	3300017738	Seawater	MYYNNTKIKIAVPFHEDLFCCPRAGSLSIDMWTSDYYELLELIGDDYE
Ga0181565_105340063	3300017818	Salt Marsh	MMYNNTKVQISVPFHEDLFCGSYLSTEMWPVDYYELLELIGDDYE
Ga0181577_101480632	3300017951	Salt Marsh	MMYNDTKIKIAVPFHEDLFCCAGAGSLSIDMWTSDYYELLELIGDDYE
Ga0181577_101570824	3300017951	Salt Marsh	MYYNDTKIKIAVPFHEDLFCCAGAGSLSIDMWTSDYYELLELIGDDYE
Ga0181577_105460323	3300017951	Salt Marsh	MMYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIADDYE
Ga0181577_106770852	3300017951	Salt Marsh	MYNNTKVQISVPFHENLFCGSYLSTEMWTEDYYELLELIAD
Ga0181577_109702751	3300017951	Salt Marsh	MMYSDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLELIGD
Ga0181580_107984771	3300017956	Salt Marsh	MNYNDNRFMISVPFHEDLFLRSNLAINMWTEDYYELLELI
Ga0181582_106412742	3300017958	Salt Marsh	MMYNNTKVQISIPFHENLYCNSSLAIEMWTEDYYELLELIGDDYE
Ga0181590_103101585	3300017967	Salt Marsh	MMYNDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLELIGDDYE
Ga0181585_108993742	3300017969	Salt Marsh	FTKDAQMMYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIADDYE
Ga0181592_101999721	3300018421	Salt Marsh	MMYNDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLE
Ga0181592_105408671	3300018421	Salt Marsh	QLMMYNDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLELIGDDYE
Ga0181592_107430993	3300018421	Salt Marsh	MKYNNTKIEIYVPHHEALFCSSTLAIDMWSEDYYELLSIIGDDYE
Ga0181593_104973472	3300018423	Salt Marsh	MLYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIGDDYE
Ga0194024_10464484	3300019765	Freshwater	MYNDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLELIGDDYE
Ga0211696_10005477	3300020252	Marine	MYYNNTKIKIAVPFHEDLFCCAGAGSLSIDMWTSDYYELLELIGDDYE
Ga0211500_10301063	3300020371	Marine	MNYNDTKIKISVPFHEDLFLRSSLSIDMWTEDYYELLELIGDDYE
Ga0211528_100229896	3300020417	Marine	MMYNNTKVKISIPFHEDLFGQCSLSIDMWTTDFYELLEQIGDDYE
Ga0211576_1000188324	3300020438	Marine	MMYNNTKVQISVPFHEDLFGGSTLSIDMWTSDYYELLEQIGDDYE
Ga0211559_100961135	3300020442	Marine	MMYNNTKVQISVPFHEDLFLSSYLSTEMWPEDYYELLELIGDDYE
Ga0211559_100980373	3300020442	Marine	MFYNDTKVRVSVPFHEDLFGGSSLSIDMWTEDFYELLEQIGDDNEESF
Ga0211559_101422375	3300020442	Marine	KVRVSVPFHEDLFGGSSLSIDMWTEDFYELLEQIGDDNEESF
Ga0211676_1001116910	3300020463	Marine	MNYNDTKFQISVSFHENLFCGSTLSIDMWTADYYELLELIGDDYE
Ga0213858_100119399	3300021356	Seawater	MMYNDTKIKVAVPFHEDLFCCAGAGSLSIDMWTSDYYELLELIGDDYE
Ga0213858_103520522	3300021356	Seawater	MYYNDTKIKIAVPFHEDLFCCPGAGSLSIDMWTSDYYELLELIGDDYE
Ga0213860_103528031	3300021368	Seawater	MMYNDTKVQISVPFHEDLFLTNLLSTWMWSDDYYEFLSIIGDDYE
Ga0222718_103204771	3300021958	Estuarine Water	MLYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLEL
Ga0222714_103862642	3300021961	Estuarine Water	MMYNNTKVQISVPFHEDLFGDSWLAREMWPEHYYELLELIGDDYE
Ga0212026_10642771	3300022069	Aqueous	MYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIADDYE
Ga0196897_10318711	3300022158	Aqueous	LLELIMNYNDNRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE
Ga0196899_10836551	3300022187	Aqueous	NRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE
Ga0196899_11162493	3300022187	Aqueous	MMYNNTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIADDYEXLNLTSSSQSLAA
Ga0255768_104289311	3300023180	Salt Marsh	TKVQISVPFHEDLFCGSYLSTEMWPVDYYELLELIGDDYE
Ga0208794_10026853	3300025093	Marine	MMYNNTKVPISIPFHEDLYLTNAINTWIWQQDYYELLELIGDDYE
Ga0208794_10356354	3300025093	Marine	MMYNNTKVQIAVPFHEDLFCCPDAGSLSIDMWTSDYYELLELIGDDYE
Ga0209232_11377843	3300025132	Marine	MMYNNTKVQISVPFHEDLFGGSTLSIDMWTTDFYELLEQIGDDYE
Ga0208303_100016639	3300025543	Aqueous	MNYNDNRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE
Ga0208898_101353112	3300025671	Aqueous	MYYNDTRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE
Ga0208898_10230063	3300025671	Aqueous	MMYNNTKIEIQLPFHEGLFCDSTLAIDMWTENYYELLSIIGDDYE
Ga0208898_11537043	3300025671	Aqueous	MLYNSTKVQISVPFHEDLFCGSYLSTEMWTEDYYELLELIGDDYE
Ga0208898_11735062	3300025671	Aqueous	MYNNTKIEIYVPHHEALFCSSTLAIDMWSEDYYELLSIIGDDYE
Ga0208162_10503183	3300025674	Aqueous	MKYNNTKIKIQFPFHEGLFCDSTLAVDMWTEEYYKLLSIIGDDYE
Ga0208162_10776933	3300025674	Aqueous	MLYNNTKVPISIPFHEDLYCSSWLAIEMWTEHYYELLELIGDDYE
Ga0208150_11030713	3300025751	Aqueous	MMYNDTKIKIAIPFHENLFCDSYLATEMWNEDYYELLEL
Ga0208899_11226513	3300025759	Aqueous	MNYNDNRFMISVPFHEDLFLRSNLAIDMWTEDYYELLELIG
Ga0208899_11412262	3300025759	Aqueous	MYYNNTKIKIAVPFHEDLFCCPNAGSLSIDMWTSDYYELLELIGDDYE
Ga0208767_10473475	3300025769	Aqueous	MMYNDTKIKIAVPFHEDLFCCPGAGSLSIDMWTSDYYELLELIGDDYE
Ga0208547_11672622	3300025828	Aqueous	MYNNTKIEIQLPFHEGLFCDSTLAIDMWTENYYELLSIIGDDYE
Ga0208917_11286694	3300025840	Aqueous	SVPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE
Ga0208645_11687052	3300025853	Aqueous	MYYNDTRFMISIPFHEDLFLRSNLAIDMWTEDYYELLELIGDDYE
Ga0208644_10769592	3300025889	Aqueous	MKYNNTKIEIQLPFHEGLFCNSTLAVDMWTEDYYELLSIIGDDYE
Ga0209404_106449432	3300027906	Marine	MYYNDTKIKIAVPFHEDLFCCPNAGSLSIDMWTSDYYELLELIGDDYE
Ga0183755_10116535	3300029448	Marine	MHYNNTKVQIAIPFHEDLFLGEGGLLSIGMWTSDYYELLELISEDYE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093738

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences