NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093822

Metagenome / Metatranscriptome Family F093822

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093822
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 62 residues
Representative Sequence MTTTAVSHELIELAHDLARAVSEHDVTRLEELLADEFTLQGAAGQLDRAEFVEAAAGPYE
Number of Associated Samples 99
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.06 %
% of genes near scaffold ends (potentially truncated) 96.23 %
% of genes from short scaffolds (< 2000 bps) 94.34 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.226 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.207 % of family members)
Environment Ontology (ENVO) Unclassified
(44.340 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.660 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.86%    β-sheet: 0.00%    Coil/Unstructured: 51.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00266Aminotran_5 15.09
PF02347GDC-P 3.77
PF08332CaMKII_AD 1.89
PF01597GCV_H 0.94
PF08669GCV_T_C 0.94
PF12680SnoaL_2 0.94
PF14534DUF4440 0.94
PF08245Mur_ligase_M 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0403Glycine cleavage system protein P (pyridoxal-binding), N-terminal domainAmino acid transport and metabolism [E] 3.77
COG1003Glycine cleavage system protein P (pyridoxal-binding), C-terminal domainAmino acid transport and metabolism [E] 3.77
COG4875Protein kinase association domain CaMKII_AD, NTF2-like superfamilyPosttranslational modification, protein turnover, chaperones [O] 1.89
COG0509Glycine cleavage system protein H (lipoate-binding)Amino acid transport and metabolism [E] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.23 %
UnclassifiedrootN/A3.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2040502000|ACOD_FV90NF402IREOHAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium503Open in IMG/M
3300000956|JGI10216J12902_106187688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300001991|JGI24743J22301_10112461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300003996|Ga0055467_10087980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium866Open in IMG/M
3300004157|Ga0062590_101315343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium713Open in IMG/M
3300004463|Ga0063356_104623309All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300004643|Ga0062591_100659445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium938Open in IMG/M
3300004799|Ga0058863_11493163Not Available655Open in IMG/M
3300005093|Ga0062594_101007600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium802Open in IMG/M
3300005093|Ga0062594_102537056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300005328|Ga0070676_10664948All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300005331|Ga0070670_101722922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300005333|Ga0070677_10931640All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005335|Ga0070666_10211834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1365Open in IMG/M
3300005345|Ga0070692_10297819All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300005347|Ga0070668_100706521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium889Open in IMG/M
3300005353|Ga0070669_100464748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1045Open in IMG/M
3300005354|Ga0070675_100287447Not Available1446Open in IMG/M
3300005366|Ga0070659_100609663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium939Open in IMG/M
3300005441|Ga0070700_100161354Not Available1543Open in IMG/M
3300005445|Ga0070708_101356723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium664Open in IMG/M
3300005455|Ga0070663_100265117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1364Open in IMG/M
3300005459|Ga0068867_100476339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1069Open in IMG/M
3300005535|Ga0070684_101550685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium625Open in IMG/M
3300005543|Ga0070672_100256583All Organisms → cellular organisms → Bacteria1474Open in IMG/M
3300005547|Ga0070693_100536210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium836Open in IMG/M
3300005564|Ga0070664_100600338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1021Open in IMG/M
3300005577|Ga0068857_100460008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1190Open in IMG/M
3300005834|Ga0068851_10752817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300005842|Ga0068858_100618206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1052Open in IMG/M
3300005844|Ga0068862_100795975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium923Open in IMG/M
3300005844|Ga0068862_102495555All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300005888|Ga0075289_1090407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300006058|Ga0075432_10022415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2160Open in IMG/M
3300006576|Ga0074047_11921872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium635Open in IMG/M
3300006845|Ga0075421_101414147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium765Open in IMG/M
3300006917|Ga0075472_10725560All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300007004|Ga0079218_11595775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium714Open in IMG/M
3300009100|Ga0075418_11179313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium830Open in IMG/M
3300009156|Ga0111538_14138292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium501Open in IMG/M
3300009553|Ga0105249_10690023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1080Open in IMG/M
3300009553|Ga0105249_12823042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300012901|Ga0157288_10288102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium569Open in IMG/M
3300012907|Ga0157283_10258208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300012909|Ga0157290_10069161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium965Open in IMG/M
3300012913|Ga0157298_10216848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium625Open in IMG/M
3300012914|Ga0157297_10177520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium718Open in IMG/M
3300012943|Ga0164241_10240886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1294Open in IMG/M
3300012943|Ga0164241_10491297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium883Open in IMG/M
3300012985|Ga0164308_10755334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium844Open in IMG/M
3300012987|Ga0164307_11143050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium642Open in IMG/M
3300012988|Ga0164306_10043125All Organisms → cellular organisms → Bacteria2683Open in IMG/M
3300013096|Ga0157307_1055548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium752Open in IMG/M
3300013100|Ga0157373_11399350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300013102|Ga0157371_10241418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1300Open in IMG/M
3300013105|Ga0157369_10078947All Organisms → cellular organisms → Bacteria3526Open in IMG/M
3300013297|Ga0157378_11085167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium837Open in IMG/M
3300013306|Ga0163162_11614682All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300013307|Ga0157372_11174531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium887Open in IMG/M
3300013308|Ga0157375_10689762All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1175Open in IMG/M
3300014264|Ga0075308_1102996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium615Open in IMG/M
3300014272|Ga0075327_1348793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300014317|Ga0075343_1033682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium963Open in IMG/M
3300014320|Ga0075342_1095266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium770Open in IMG/M
3300014745|Ga0157377_11711222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium508Open in IMG/M
3300015077|Ga0173483_10417275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium693Open in IMG/M
3300015371|Ga0132258_12725072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1233Open in IMG/M
3300018476|Ga0190274_10728835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1040Open in IMG/M
3300021445|Ga0182009_10703907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300022309|Ga0224510_10878207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium506Open in IMG/M
3300024055|Ga0247794_10065126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1027Open in IMG/M
3300025556|Ga0210120_1000051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia31304Open in IMG/M
3300025556|Ga0210120_1071702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium682Open in IMG/M
3300025885|Ga0207653_10045304Not Available1453Open in IMG/M
3300025901|Ga0207688_10113057All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300025901|Ga0207688_10877242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium568Open in IMG/M
3300025908|Ga0207643_10800376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300025917|Ga0207660_11457149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300025927|Ga0207687_11017690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium711Open in IMG/M
3300025932|Ga0207690_11038351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium682Open in IMG/M
3300025933|Ga0207706_10153547All Organisms → cellular organisms → Bacteria2025Open in IMG/M
3300025935|Ga0207709_11463551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium566Open in IMG/M
3300025940|Ga0207691_10037968All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia4458Open in IMG/M
3300025942|Ga0207689_11134828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300025944|Ga0207661_11928074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium536Open in IMG/M
3300025959|Ga0210116_1111412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300026035|Ga0207703_10202098All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300026066|Ga0208290_1003909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1308Open in IMG/M
3300026089|Ga0207648_10221598All Organisms → cellular organisms → Bacteria1681Open in IMG/M
3300026142|Ga0207698_11846029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300027543|Ga0209999_1073022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300028381|Ga0268264_11127201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium793Open in IMG/M
3300028587|Ga0247828_10149977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1167Open in IMG/M
3300028589|Ga0247818_10676320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium714Open in IMG/M
3300028597|Ga0247820_11047784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium584Open in IMG/M
3300028809|Ga0247824_10458868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300031455|Ga0307505_10074306All Organisms → cellular organisms → Bacteria1515Open in IMG/M
3300031547|Ga0310887_10730645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300031854|Ga0310904_11320537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300031908|Ga0310900_10311946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1161Open in IMG/M
3300031908|Ga0310900_10393264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1050Open in IMG/M
3300032003|Ga0310897_10647775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300032013|Ga0310906_10769317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium678Open in IMG/M
3300032075|Ga0310890_10737315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium775Open in IMG/M
3300033550|Ga0247829_10768595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium802Open in IMG/M
3300033551|Ga0247830_11513795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil12.26%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands4.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.72%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.77%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.83%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.89%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.94%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.94%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.94%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.94%
Fungus GardenHost-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden0.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2040502000Fungus garden microbial communities from Atta colombica in Panama - dump bottomHost-AssociatedOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005888Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006917Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014264Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rdEnvironmentalOpen in IMG/M
3300014272Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1EnvironmentalOpen in IMG/M
3300014317Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022309Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025556Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025885Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025959Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026066Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027543Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ACODB_18919002040502000Fungus GardenMTTAVAHELVELSHDLARAVSEHDVDALEQMLAWEFTLQGAAGQLDRDEFLAAAAGPYVIDEFAYEE
JGI10216J12902_10618768823300000956SoilMTVAVAHELVELAHDLAKAVSEHDVDRLEHLLAAEFTLQGAAGQLGRDAFLEAAAGPYEIDEFTYEE
JGI24743J22301_1011246123300001991Corn, Switchgrass And Miscanthus RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGPYEIDEFSYEQI
Ga0055467_1008798013300003996Natural And Restored WetlandsMTTTAVSNELVELAHELAQAVAEHDVERLETMLAGEFTLQGAAGQLDRE
Ga0062590_10131534313300004157SoilMTTAVAHELVELSHDLARAVSEHDVGALDHLLASEFTLQGAAGQLDREAFLEAAAGPYEIDEFAYEEIDPEIY
Ga0063356_10462330913300004463Arabidopsis Thaliana RhizosphereMTTTAVSHELIELAHDLARAVSEHDVPRLEELLADEFTLQGAAGQLDRAEFV
Ga0062591_10065944523300004643SoilMTTTVSHELVELSHDLARAVSEHDVGALEHLLASEFTLQGAAGQLDRGEFLAAAAGPYEIDEFAYEEIDPEIYGNT
Ga0058863_1149316313300004799Host-AssociatedMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGLLPLPVIEHFA*
Ga0062594_10100760023300005093SoilMTAAVSHELVELSHDLARAVSEHDVGALEQMLAAEFTLQGAAGQLDREEFLAAAGGPYEIDEFSYEQIDPEIYG
Ga0062594_10253705623300005093SoilMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGPYEIDEFSYEQIDPEIYG
Ga0070676_1066494823300005328Miscanthus RhizosphereMMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEF
Ga0070670_10172292213300005331Switchgrass RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAG
Ga0070677_1093164023300005333Miscanthus RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYEEID
Ga0070666_1021183413300005335Switchgrass RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYE
Ga0070692_1029781923300005345Corn, Switchgrass And Miscanthus RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGADGQLDRDEFLAAASGPYEID*
Ga0070668_10070652123300005347Switchgrass RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPYEID
Ga0070669_10046474823300005353Switchgrass RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYEEI
Ga0070675_10028744723300005354Miscanthus RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRA
Ga0070659_10060966313300005366Corn RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDR
Ga0070700_10016135413300005441Corn, Switchgrass And Miscanthus RhizosphereMMTTTAVSHELIELAHDLARAVSEHEVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYEEIDPEIY
Ga0070708_10135672323300005445Corn, Switchgrass And Miscanthus RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEA
Ga0070663_10026511713300005455Corn RhizosphereMTTAVSHELVELSHDLARAVSEHDVDALERMLASEFTLQGAAGQLDREEFLAAAA
Ga0068867_10047633923300005459Miscanthus RhizosphereMTVAVAHELVELANDLARAVSEHDVERLEELLASEFTLQGAAGQLDREEFLVAAAGPYEIDEFTYEQIDPEIYGN
Ga0070684_10155068523300005535Corn RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPYEIDEF
Ga0070672_10025658323300005543Miscanthus RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPY
Ga0070693_10053621013300005547Corn, Switchgrass And Miscanthus RhizosphereMTTTAVSHELIELAHDLARAVSEHEVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYEEIDPEIY
Ga0070664_10060033813300005564Corn RhizosphereMTTAVAHELVELSYDLARAVSEHDLGALEHLLASEFTLQGAAGQLDRGEFLAAAAGPYEIDEFAYEEIDPEIYGNT
Ga0068857_10046000823300005577Corn RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDDFAYEE
Ga0068851_1075281713300005834Corn RhizosphereMTAAVSHELVELSHDLARAVSEHDVGALEQMLAAEFTLQGAAGQLDREEFLAAAGGPYEIDEFSYEQIDPEIYGNT
Ga0068858_10061820623300005842Switchgrass RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEA
Ga0068862_10079597523300005844Switchgrass RhizosphereMTTAVSHELVELSHDLARAVSEHDVDALERMLASEFTLQGAAGQLDREE
Ga0068862_10249555523300005844Switchgrass RhizosphereMTTAVAHELVELSHDLARAVSEHDLGALEHLLASEFTLQGAAGQLDRGEFLAAA
Ga0075289_109040723300005888Rice Paddy SoilMTAVVANELIELSFDLARAVSEHDVGSLEDLLAAEFTLQGAAGQLDREEFLAAAAG
Ga0075432_1002241513300006058Populus RhizosphereMTTTAVSHELIELAHDLARAVSEHDVARLEELLADEFTLQGAAGQLDRAEFVEAAAG
Ga0074047_1192187213300006576SoilMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPYEIDEFAYEQ
Ga0075421_10141414713300006845Populus RhizosphereMTTTAVANELVELAHDLARAVSEHDVERLESMLADEFTRQGAAGQLNREAFLEAASGPYEIDEFTYEEIDPEV
Ga0075472_1072556013300006917AqueousMTSAVVHELIDLSNDLIRAVSTSDVARLDELLAPEFTLQGAAGYLDRGQLIEAAGGPYAITSWQYEE
Ga0079218_1159577513300007004Agricultural SoilMTVAVAHELVELAHDLAKAVSEHDVDRLEHLLAAEFTLQGAAGQLDRDAFLEAAAG
Ga0075418_1117931323300009100Populus RhizosphereMTTTVAHELVELSHDLARAVSEHDLEALEHLLASEFTLQGAAGQLDRGEFLAAAAGPYEIDEFAYEEI
Ga0111538_1413829223300009156Populus RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEELLAVEFTLQGAAGQLDRAAFVEAAGGPY
Ga0105249_1069002323300009553Switchgrass RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAG
Ga0105249_1282304223300009553Switchgrass RhizosphereMTTAVAHELVELSHDLARAVSDHDVGALEGMLASEFTLQGAAGQLDRAAFVEAAA
Ga0157288_1028810223300012901SoilMTTAVAHELVELSHDLARAVSEHDLEALEHLLASEFTLQGAAGQLDRGEFLAAAAGPYEIDEV
Ga0157283_1025820823300012907SoilMTTTAVSHELIELAHDLARAVSEHDVTRLEELLADEFTLQGAAGQLDRAEFVEA
Ga0157290_1006916123300012909SoilMTTTAVSHELVELEHELARAVCDHDVERLETMLASEFTLQGAAGQLDRDAFLE
Ga0157298_1021684813300012913SoilMTTTAVSHELIELAHDLARAVSEHDVSRLEELLAVEFTLQGAAGQLDRAAFVEAAGG
Ga0157297_1017752023300012914SoilMTTAVAHELVELSHDLARAVSEHDLEALEHLLASEFTLQGAAGQLDRGEFLAAAAGPYEI
Ga0164241_1024088623300012943SoilMTTTAVSHELIELAHDLARAVSEHDVPRLEELLADEFTLQGAAGQLDRAEFVEAAAGPYEVDEFAY
Ga0164241_1049129713300012943SoilMTTTAVSHELIELAHDLARAVSEHDVPRLEELLADEFTLQGAAGQLDRAEFVEA
Ga0164308_1075533413300012985SoilMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPYEIDEFAYEQIDPEIYGNTA
Ga0164307_1114305013300012987SoilMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGPYEIDEFSYEQIDPE
Ga0164306_1004312533300012988SoilMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGPYEIDEFSY
Ga0157307_105554823300013096SoilMTTTAVSHELIELAHDLARAVSEHDVTRLEELLADEFTLQGAAGQLDRAEFVEAAAGPYE
Ga0157373_1139935013300013100Corn RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEITLQGAAGQLDRDEFL
Ga0157371_1024141813300013102Corn RhizosphereMTAAVSHELVELSHDLARAVSEHDVGALEQMLAAEFTLQGAAGQLDREEFLAAAGGPYEIDEFSYEQIDPE
Ga0157369_1007894713300013105Corn RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGPYGI
Ga0157378_1108516713300013297Miscanthus RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEF
Ga0163162_1161468233300013306Switchgrass RhizosphereMTTTTVSHELIELAHDLARAVSEHEVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEID*
Ga0157372_1117453123300013307Corn RhizosphereMTAAVSHELVELSHDLARAVSEHDVGALEQMLAAEFTLQGAAGQLDREEFLAAAGGPYEIDEFS
Ga0157375_1068976213300013308Miscanthus RhizosphereMTTAAVSHELVELAHDLARAVSEHVLARLDQLLAAEFTLQGAAGQLDRVEFLEA
Ga0075308_110299613300014264Natural And Restored WetlandsMTAGIALELVERSQEVVRAVQEHDVAALERLLAREFTLQGAAGRLRRDEFLAAAAGPYQIDSFSFEEIDPE
Ga0075327_134879313300014272Natural And Restored WetlandsMTVAVAHELVELANDLARAVSEHDVPRLEELLAAEFTLQGAAGQLDRDEFLAAA
Ga0075343_103368233300014317Natural And Restored WetlandsMTVAVAHELVELANDLARAVSEHDVSRLEELLAAEFTLQGAAGQLDRS
Ga0075342_109526623300014320Natural And Restored WetlandsMTVAVAHELVELANDLARAVSEHDVSRLEELLAAEFTLQGAAGQLDRSEFLTAAAGPYEIDEF
Ga0157377_1171122223300014745Miscanthus RhizosphereMTTTAVSHELIELAHDLARAVSEHEVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYEEIDPEI*
Ga0173483_1041727513300015077SoilMTTAVSHELVELSHDLARAVSEHDVGALEHLLASEFTLQGAAGQLDRGE
Ga0132258_1272507223300015371Arabidopsis RhizosphereMTTAVSHELVELSHDLARAVVEHDVGSLEHMLAFEFTLQGAAGQLDRAEFLAAAGGPYEIDEFSYEEIDPEIY
Ga0190274_1072883513300018476SoilMTVAVAHELIELANDLARAVSEHDVERLEGLLASEFTLQGAAGQLDREEFLLAAAGPYQIDEFTYEQIDPEIYGNT
Ga0182009_1070390713300021445SoilMTTTAVSHELIELAHDLARAVSEHDVARLEELLADEFTLQGAAGQLDRAEFVE
Ga0224510_1087820723300022309SedimentMAVVHELIELSNDLIRAVSTSDVARLEELLSPEFTLQGAAGYLDRGQLIE
Ga0247794_1006512613300024055SoilMTTTAVSHELIELAHDLARAVSEHDVPRLEELLADEFTLQGAAGQLDRAEFVEAAAGPYEIDEFAY
Ga0210120_100005113300025556Natural And Restored WetlandsMTAVVANELIELSFDLARAVSEHDVDSLEGMLAAEFTLQGAAGQLDREEFLAAAAGPYDIEEFSYEEIDPEVYG
Ga0210120_107170213300025556Natural And Restored WetlandsMTAVVANELIELSFDLARAVSEHDVGSLEDLLAAEFTLQGAAGQLDREEFLAAAAGPYDIEEFSYEEIDPEVYG
Ga0207653_1004530413300025885Corn, Switchgrass And Miscanthus RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYE
Ga0207688_1011305723300025901Corn, Switchgrass And Miscanthus RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGPYEI
Ga0207688_1087724213300025901Corn, Switchgrass And Miscanthus RhizosphereMTTTVSHELVELSHDLARAVSEHDVGALEHLLASEFTLQGAAGKLDRG
Ga0207643_1080037623300025908Miscanthus RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFLAAASGPYEIDEFSYEQIDPEI
Ga0207660_1145714923300025917Corn RhizosphereMTTTAVSHELIELAHDLARAVSEHDVTRLEELLADEFTLQGAAGQLDRAEFVE
Ga0207687_1101769023300025927Miscanthus RhizosphereMTTAVSHELVELSHDLARAVSEHDVDALERMLASEFTLQGAAGQLDREEFLAAAAGPYAIDEF
Ga0207690_1103835113300025932Corn RhizosphereMTTAVSHELVELSHELARAVSEHDVGALEEMLAAEFTLQGAAGQLDRDEFL
Ga0207706_1015354713300025933Corn RhizosphereMTTTAVSHELVELEHELARAVCDHDVERLETMLASEFTLQGAAGQLDRDAF
Ga0207709_1146355123300025935Miscanthus RhizosphereMTVAVAHELVELANDLARAVSEHDVERLEELLASEFTLQGAAGQLDREEFLVAAAGPYQI
Ga0207691_1003796813300025940Miscanthus RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPYEIDEFAYEQIDPEIYGNT
Ga0207689_1113482813300025942Miscanthus RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGPLDRIEFL
Ga0207661_1192807413300025944Corn RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEF
Ga0210116_111141213300025959Natural And Restored WetlandsMTVAVAHELVELANDLARAVSEHDVSRLEELLAAEFTLQGAAGQLDRSEFLTAAAGPYE
Ga0207703_1020209813300026035Switchgrass RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPYE
Ga0208290_100390913300026066Natural And Restored WetlandsMTAVVANELIELSFDLARAVSEHDVDSLEGMLAAEFTLQGAAGQLDREEFLAAAAGPYDIEEFSYEEI
Ga0207648_1022159823300026089Miscanthus RhizosphereMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRVEFLEAAAGPYEIDEFAYEQIDPEIYGN
Ga0207698_1184602923300026142Corn RhizosphereMTTAVSHELVELSHDLARAVSEHDVDALERMLASEFTLQGAAGQLDREEFLAAAAG
Ga0209999_107302213300027543Arabidopsis Thaliana RhizosphereMTTTVSHELVELSHDLARAVSEHDVGALEHLLASEFTLQGAAGQLDRGE
Ga0268264_1112720113300028381Switchgrass RhizosphereMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYEEIDPEI
Ga0247828_1014997713300028587SoilMTTTAVSHELIELAHDLARAVSEHEVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYE
Ga0247818_1067632023300028589SoilMTTAVSHELVELSHDLARAVSEHDVDALERMLASEFTLQGAAGQLDREEFLAAA
Ga0247820_1104778413300028597SoilMTVAVAHELVELANDLARAVVEHDVERLEELLASEFPLQGAAGQLDREA
Ga0247824_1045886823300028809SoilMTTTAVSHELIELAHDLARAVSEHEVSRLEELLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDEFAYEEIDPEIYGNT
Ga0307505_1007430623300031455SoilMTTTAVSHELIELAHDLARAVSEHDVTRLEELLADEFTLQGAAGQLDRAEFVEAAAGPYEIDEFAYE
Ga0310887_1073064513300031547SoilMTVAVAHELVELAHDLARAVSDHDVARLEELLASEFTLQGAAGQLDRDEFLQAA
Ga0310904_1132053713300031854SoilMTTTAVSHELIELAHDLARAVSEHDVSRLEALLAEEFTLQGAAGQLDRAAFVEAAAGPYEIDE
Ga0310900_1031194613300031908SoilMTTAAVSHELVELAHDLARAVSEHDLERLDQLLAAEFTLQGAAGQLDRIEFLEAAAGPYEIDEFAYEQIDPEIYGN
Ga0310900_1039326423300031908SoilMTTAVSHELVELSHDLARAVSEHDVDALERMLASEFTLQGAAGQLDREEFLAA
Ga0310897_1064777513300032003SoilMTVAVAHELVELANDLARAVSEHDVERLEELLASEFTLQGAAGQLDREEFLVAAA
Ga0310906_1076931713300032013SoilMTVAVAHELVELAHDLARAVSEHDVDRLERLLASEFTLQGAAGQLDRAAFLEAAAG
Ga0310890_1073731513300032075SoilMTVAVAHELVELANDLARAVVEHDVERLEELLASEFTLQGAAGQLDREAFLLAAAGPYQIDDFTYEQIDPEI
Ga0247829_1076859523300033550SoilMTVAVAHELIELAHDLARAVSEHDVERLEELLASEFTLQGAAGQLDREEFLLAAAGTY
Ga0247830_1151379523300033551SoilMTVAVAHELIELANDLARAVSEADVERLEELLASEFTLQGAAGQLDREEFLVAAAGPYQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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