Metagenome / Metatranscriptome Family F094145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094145
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	122 residues
Representative Sequence	CVAPEKGSPRSWPKGALAVARKGGGFKVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLEA
Number of Associated Samples	77
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.06 %
% of genes near scaffold ends (potentially truncated)	85.85 %
% of genes from short scaffolds (< 2000 bps)	85.85 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (94.340 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.245 % of family members)
Environment Ontology (ENVO)	Unclassified (39.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.528 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.25% β-sheet: 9.59% Coil/Unstructured: 56.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF05685	Uma2	2.83
PF04079	SMC_ScpB	1.89
PF03796	DnaB_C	0.94
PF04545	Sigma70_r4	0.94
PF13474	SnoaL_3	0.94
PF01526	DDE_Tnp_Tn3	0.94
PF00589	Phage_integrase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	2.83
COG1386	Chromosome segregation and condensation protein ScpB	Transcription [K]	1.89
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.94
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.94
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
All Organisms	root	All Organisms	5.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
cellular organisms	root	All Organisms → cellular organisms	5.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.34 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig50348	Not Available	856	Open in IMG/M
3300001593\|JGI12635J15846_10712075	Not Available	578	Open in IMG/M
3300003219\|JGI26341J46601_10035103	Not Available	1617	Open in IMG/M
3300003219\|JGI26341J46601_10081674	Not Available	965	Open in IMG/M
3300003219\|JGI26341J46601_10183374	Not Available	573	Open in IMG/M
3300003368\|JGI26340J50214_10077115	Not Available	878	Open in IMG/M
3300003368\|JGI26340J50214_10127499	Not Available	643	Open in IMG/M
3300004092\|Ga0062389_102039404	Not Available	750	Open in IMG/M
3300005181\|Ga0066678_10548357	Not Available	768	Open in IMG/M
3300005437\|Ga0070710_10945027	Not Available	625	Open in IMG/M
3300005437\|Ga0070710_11479428	Not Available	510	Open in IMG/M
3300005439\|Ga0070711_101828662	Not Available	533	Open in IMG/M
3300005536\|Ga0070697_100339826	Not Available	1295	Open in IMG/M
3300005610\|Ga0070763_10119883	Not Available	1346	Open in IMG/M
3300005764\|Ga0066903_102514873	Not Available	997	Open in IMG/M
3300005921\|Ga0070766_10837566	Not Available	628	Open in IMG/M
3300006176\|Ga0070765_101365760	Not Available	668	Open in IMG/M
3300006176\|Ga0070765_101816686	Not Available	572	Open in IMG/M
3300006893\|Ga0073928_10932002	Not Available	594	Open in IMG/M
3300010339\|Ga0074046_10080432	Not Available	2118	Open in IMG/M
3300010339\|Ga0074046_10822250	Not Available	543	Open in IMG/M
3300010341\|Ga0074045_10218998	Not Available	1269	Open in IMG/M
3300010341\|Ga0074045_10471940	Not Available	808	Open in IMG/M
3300010343\|Ga0074044_10021672	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	4635	Open in IMG/M
3300010343\|Ga0074044_10481891	Not Available	811	Open in IMG/M
3300010343\|Ga0074044_10931784	Not Available	568	Open in IMG/M
3300010379\|Ga0136449_100942072	Not Available	1400	Open in IMG/M
3300012202\|Ga0137363_11753603	Not Available	513	Open in IMG/M
3300012361\|Ga0137360_10509263	Not Available	1025	Open in IMG/M
3300012361\|Ga0137360_11057027	Not Available	701	Open in IMG/M
3300012362\|Ga0137361_11817783	Not Available	527	Open in IMG/M
3300012923\|Ga0137359_10144059	Not Available	2123	Open in IMG/M
3300012923\|Ga0137359_11750362	Not Available	509	Open in IMG/M
3300012960\|Ga0164301_10915078	Not Available	682	Open in IMG/M
3300012984\|Ga0164309_10667250	Not Available	821	Open in IMG/M
3300016319\|Ga0182033_10500374	Not Available	1044	Open in IMG/M
3300016357\|Ga0182032_10103885	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300016357\|Ga0182032_10923492	Not Available	743	Open in IMG/M
3300016371\|Ga0182034_10603976	Not Available	926	Open in IMG/M
3300016387\|Ga0182040_10065745	Not Available	2328	Open in IMG/M
3300016404\|Ga0182037_10246778	Not Available	1411	Open in IMG/M
3300016404\|Ga0182037_11406268	Not Available	617	Open in IMG/M
3300016422\|Ga0182039_10963496	Not Available	764	Open in IMG/M
3300020581\|Ga0210399_10873686	Not Available	731	Open in IMG/M
3300020583\|Ga0210401_10505964	Not Available	1071	Open in IMG/M
3300021088\|Ga0210404_10672891	Not Available	590	Open in IMG/M
3300021168\|Ga0210406_10951466	Not Available	643	Open in IMG/M
3300021168\|Ga0210406_11304874	Not Available	523	Open in IMG/M
3300021168\|Ga0210406_11377359	Not Available	505	Open in IMG/M
3300021171\|Ga0210405_10410973	Not Available	1065	Open in IMG/M
3300021171\|Ga0210405_10534684	Not Available	917	Open in IMG/M
3300021171\|Ga0210405_10664258	Not Available	808	Open in IMG/M
3300021171\|Ga0210405_10857555	Not Available	693	Open in IMG/M
3300021180\|Ga0210396_10677808	Not Available	892	Open in IMG/M
3300021402\|Ga0210385_10813581	Not Available	717	Open in IMG/M
3300021405\|Ga0210387_11713027	Not Available	532	Open in IMG/M
3300021406\|Ga0210386_10420775	Not Available	1153	Open in IMG/M
3300021406\|Ga0210386_11767946	Not Available	509	Open in IMG/M
3300021407\|Ga0210383_11063057	Not Available	684	Open in IMG/M
3300021432\|Ga0210384_10323632	Not Available	1389	Open in IMG/M
3300021474\|Ga0210390_10495416	Not Available	1029	Open in IMG/M
3300021474\|Ga0210390_10750838	Not Available	811	Open in IMG/M
3300021560\|Ga0126371_10912167	Not Available	1022	Open in IMG/M
3300025910\|Ga0207684_10325063	Not Available	1325	Open in IMG/M
3300025922\|Ga0207646_11435679	Not Available	599	Open in IMG/M
3300026514\|Ga0257168_1078387	Not Available	732	Open in IMG/M
3300026551\|Ga0209648_10546437	Not Available	649	Open in IMG/M
3300027069\|Ga0208859_1046755	Not Available	507	Open in IMG/M
3300027521\|Ga0209524_1123680	Not Available	539	Open in IMG/M
3300027537\|Ga0209419_1125254	Not Available	513	Open in IMG/M
3300027603\|Ga0209331_1012561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2208	Open in IMG/M
3300027698\|Ga0209446_1130905	Not Available	647	Open in IMG/M
3300027812\|Ga0209656_10128650	Not Available	1295	Open in IMG/M
3300027824\|Ga0209040_10004004	Not Available	11199	Open in IMG/M
3300027824\|Ga0209040_10247789	Not Available	895	Open in IMG/M
3300027824\|Ga0209040_10407281	Not Available	630	Open in IMG/M
3300027825\|Ga0209039_10075445	Not Available	1483	Open in IMG/M
3300027825\|Ga0209039_10184946	Not Available	853	Open in IMG/M
3300027825\|Ga0209039_10212786	Not Available	782	Open in IMG/M
3300028047\|Ga0209526_10802400	Not Available	583	Open in IMG/M
3300029636\|Ga0222749_10195321	Not Available	1009	Open in IMG/M
3300031573\|Ga0310915_10749464	Not Available	688	Open in IMG/M
3300031708\|Ga0310686_107995931	Not Available	743	Open in IMG/M
3300031718\|Ga0307474_10204819	Not Available	1503	Open in IMG/M
3300031719\|Ga0306917_10713005	Not Available	788	Open in IMG/M
3300031744\|Ga0306918_10978212	Not Available	658	Open in IMG/M
3300031754\|Ga0307475_10473168	Not Available	1006	Open in IMG/M
3300031833\|Ga0310917_10168515	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300031833\|Ga0310917_11053756	Not Available	544	Open in IMG/M
3300031890\|Ga0306925_10104767	All Organisms → cellular organisms → Bacteria	3013	Open in IMG/M
3300031946\|Ga0310910_10520005	Not Available	945	Open in IMG/M
3300031954\|Ga0306926_10722484	Not Available	1206	Open in IMG/M
3300032001\|Ga0306922_10374039	Not Available	1527	Open in IMG/M
3300032035\|Ga0310911_10507336	Not Available	699	Open in IMG/M
3300032059\|Ga0318533_10158054	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300032076\|Ga0306924_10306904	Not Available	1821	Open in IMG/M
3300032180\|Ga0307471_100399372	Not Available	1502	Open in IMG/M
3300032828\|Ga0335080_10427628	Not Available	1417	Open in IMG/M
3300033289\|Ga0310914_10942672	Not Available	763	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.11%
Host-Associated	Host-Associated	0.94%
Engineered	Engineered	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.02%
Aquatic	Environmental → Aquatic	15.09%
Plants	Host-Associated → Plants	0.94%
Modeled	Engineered → Modeled	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.02%
Freshwater	Environmental → Aquatic → Freshwater	14.15%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.49%
Loam	Environmental → Terrestrial → Soil → Loam	16.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.55%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.28%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	14.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.21%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0348.00003530	2166559005	Simulated	VGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLNA
JGI12635J15846_107120751	3300001593	Forest Soil	MLACLCVAPEKGSPRSWPKGALVIARKGGGFEVKLWDKPVDTPGLSLALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSKGEALGKQAIHDALSRLSVQSEGQVRLTPELIRQAFLQLKA*
JGIcombinedJ26739_1014268031	3300002245	Forest Soil	PIRAWVIDRIEKETKATRKALHFIRRDLAMLACLCVAPEKGSPRNWPKGALAVVRKGGGCEVKLWDKPVEAQGLALALLYWHTWRDRLDRPEQSRLHRKEWAYSXLLFPNSKGEALKKQSMHDALSRLSVQGEGRVRLTPEMIRQAFLQLNP*
JGI26341J46601_100351032	3300003219	Bog Forest Soil	MATFLEFLESKLPANVRDSPDLEPVRTWMLERIEAETKAARKVSILIRRDLAMLAALCIAPERNSPRRWPKSALAVTRHQSGGFKIMLWDQEVESEGLSLALLYWHFWRERLGRPEQSRLYRKACAYSNLLFPNSKGKALEKQVLHDALSRLSVRFEGPLRLTPGLIRRAFIQLKA*
JGI26341J46601_100816741	3300003219	Bog Forest Soil	WPKGALTIARKGGGFKVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQAEGGVRLTPELIRQAFLRA*
JGI26341J46601_101833742	3300003219	Bog Forest Soil	PKQQGGGLEVILWDKPIDKPGLTLALLYWHRWRERLDRPEQSRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGIQAEGGVRLTPELVRKAFLQLEA*
JGI26340J50214_100771151	3300003368	Bog Forest Soil	PKAALTVARKGGEFEVKLWEKPVDAAGLALTLLYWHSWRERLDRPEQSRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGIQAEGGVRLTPELVRKAFLQLEA*
JGI26340J50214_101274991	3300003368	Bog Forest Soil	IDRIEKGTKATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKTWAYSNLLFPNSKGKVLGKQAIHDALSRLSVQSEGQDRLTPELIRQAFLQVKA*
Ga0062389_1020394041	3300004092	Bog Forest Soil	RDLAILAGLCAAPEKGSPRRWPKSALEVTRQGGAFQVTLWNKTVRRSALALALLYWDTWRKRLDRPEQSRFFRKAWAYSPLLFPNSNGDALTKHSTRNALRRLTVRGEGRVRLTPSEIRRAFLQEEVPRSNREKAGSDQI*
Ga0066678_105483572	3300005181	Soil	TKATRKALHFIRRDLAMLACLCIAPEKGSPRSWPKGALAVVAREGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLRREA*
Ga0070710_109450271	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	KSTRKALHFIRRDLAMVACLCIASEKGSPRRWPKTALVVTRKGGGRFEVKLWDKPVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVQELGVRLTPELVRKAFLQLKA*
Ga0070710_114794281	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	CVAPEKGSPRSWPKGALAVARKGGGFKVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLEA*
Ga0070711_1018286621	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EKGSPRRWAKTALTVTRKRVGDFEVKLWDKPVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA*
Ga0070697_1003398261	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	METKATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFKVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRQAFLQLEA*
Ga0070763_101198831	3300005610	Soil	VKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQLKA*
Ga0066903_1025148732	3300005764	Tropical Forest Soil	KAALTVTRQGGGYLVKLWDKPVEAPGLALALLYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLQLAA*
Ga0070766_108375661	3300005921	Soil	ATRKALHFIRRDLAMLACLCVAPEQGSPRRWPKGALAIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQLKA*
Ga0070765_1013657602	3300006176	Soil	AVKLWDKAVEPPGLALALLYWHSWRERLDRPEQSRLHRKAWALSDLLFPNSKGKTLKKQAMHDALSRLSVQGEGRVRLTPGRVREVFLHLRA*
Ga0070765_1018166861	3300006176	Soil	AMLACLCVAPEQGSPRRWPKGALSIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQLKA*
Ga0073928_109320022	3300006893	Iron-Sulfur Acid Spring	KETKATRKALHFVRRDLAMLACLCVAPEKGSPRSWPKGALAIARMGGGFEVKLWDKLVDTPGLGLALLYWHTWRERLDRPEQSRLHRKAWACSDLLFPNSKGEVLGKQAIHDALSRLGAQSEGRVRLTPELIRQAFLQLKT*
Ga0074046_100804321	3300010339	Bog Forest Soil	IDRVDKETRTTRKALHFIRRDLAMLACLCVAPEKGSPRRWPKTSLTVARKGGGFEVKLWDKPVDTPGLALALLYWHSWRDRLDRPEQSRIHRKAWAYSDLLFPNSRGQVLEKQALHNALARLGVQPADSVHLTPELVRQAFLQLGA*
Ga0074046_108222501	3300010339	Bog Forest Soil	IDRVDKETRTTRKALHFIRRDLAMLACLCVAPEKGSPRRWPKTSLTVARKGGGFEVKLWDKPVDTPGLALALVYWHSWRDRLDRPEQSRIHRKAWAYSDLLFPNSRGQVLEKQALHNALARLGVQPADSVHLTPELVRQAFLQLGA*
Ga0074045_102189982	3300010341	Bog Forest Soil	VAPEQGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKTWAYSNLLFPNSKGKVLGKQAIHDALSRLSVQSEGQDRLTPELIRQAFLQVKA*
Ga0074045_104719401	3300010341	Bog Forest Soil	GALSIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLRVQAEGGVRLTPELIRQAFLRA*
Ga0074044_100216728	3300010343	Bog Forest Soil	LCIAPGQGSPRRWPKSALVVTRQGGGFHVKLWNRKVKTHGLALALVYWHSWRERLDRPEQSRIYRKAWAYSDLLFPNSKGEALTKHAMRNALLRLTVRGEGRVRLTPGEIRQAFMQLDG*
Ga0074044_104818911	3300010343	Bog Forest Soil	LWDKPVDTPGLALALLYWHTWRERLDRPEESRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGIEAEGVRLTPEALRKAFLQFEA*
Ga0074044_109317841	3300010343	Bog Forest Soil	IEKGTKATRKALHFIRRDLAMLACLCVAPEQGSPRSWPKGALAVARKGGGFEVKLWDKPVHTPGLALALLYWHTWRERLDRPEQSRLHRKTWAYSNLLFPNSKGKVLGKQAIHDALSRLSVQSEGQVRLTPELIRQAFLQVKA*
Ga0136449_1009420722	3300010379	Peatlands Soil	PERGSPRRWPKTALIVAPKQQGGGFEVKLWEKPVETPGLALALLYWHSWRERLDRPEQSRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGIQAEGGVRLTPELVRKAFLQLEA*
Ga0137363_117536031	3300012202	Vadose Zone Soil	RDLAMLACLCVAPERGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPDQSSLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELIRKAFLQLQA*
Ga0137360_105092632	3300012361	Vadose Zone Soil	LAVTRQGFEVKLWDKPVKAQGLALALLYWQTWRERLDRPEESRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLER*
Ga0137360_110570271	3300012361	Vadose Zone Soil	MLACLCVAPEKGSPRSWPKGVLAVARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSEPLFPNSQGEVLGKQAIHDALSRLRVQGEGRVRLTPELIRQAFLQA*
Ga0137361_118177831	3300012362	Vadose Zone Soil	GGGFEVKLWDKPVESRSLVLTLLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSKGEVLGRQAILDALSRLVQGEGRVRLTPELIRQAFLQIKA*
Ga0137359_101440591	3300012923	Vadose Zone Soil	VKLWDRAVETQGLALALLYWHTWRERLDRPEQSRIYRKAWAYSDLLFPNSKGEALTKYAMRNALSRLSVRGEGRIRLTPGMVRQAFLQLEE*
Ga0137359_117503621	3300012923	Vadose Zone Soil	RIEKETKATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLEA*
Ga0164301_109150782	3300012960	Soil	RKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRQAFLQLEA*
Ga0164309_106672501	3300012984	Soil	RRWAKTALTVSRKRVGDFEVKLWDKAVEAPGLALALLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGETLKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA*
Ga0182033_105003741	3300016319	Soil	DRIEEETKATRKASHFIRRDLAMLACLCAAPAEGSLRSWPKAALTVTRQGGGYLVKLWDKPVEAPGLALALLYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLQLAA
Ga0182032_101038853	3300016357	Soil	KGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAHSDLLFPNSRGEALKKQAMHDALSRLGIQVECSVRVTPELVRKAFLQPEA
Ga0182032_109234922	3300016357	Soil	VRSWVMDRIEEETKTTRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0182034_106039762	3300016371	Soil	VLAVSPKAGGLDVELWDKPVDTPGRAPALLNWHTRRQRLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0182040_100657453	3300016387	Soil	LAMLACLCVAPEKGSPRSWPKGALAVARKAGGFEVKLWDKPVDTQGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0182037_102467781	3300016404	Soil	VEIPDLGPVRSWVMDRIEEETKATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKAGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0182037_114062681	3300016404	Soil	ACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSRGETLTKHAMRNALSRLGIRADGGVRLTPELVRKAFLQLE
Ga0182039_109634962	3300016422	Soil	ARKAGGFEVKLWDKPVDTQGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0210399_108736861	3300020581	Soil	LWDKPVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0210401_105059641	3300020583	Soil	PDYGPIRAWVIDHIEKETRETRKALHFIRRDLAMLACLCVAPEQGSPRRWPKGALAIARKGGGFKVKVWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQAEGGVRLTPELIRQAFLQRKA
Ga0215015_109982731	3300021046	Soil	DYGPIRVWVIDQIEKETRETRKAFHFIRRDLAMLDCLCVAPEQGSPRRWPKGALTIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLNRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQLKA
Ga0210404_106728911	3300021088	Soil	IEKETKATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGVLAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDLPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRQAFLQLEA
Ga0210404_107725771	3300021088	Soil	IRNWVLDSIEKETKANRKALHFVRRDLAMLACLCVAPEKGSPRRWAKTALTVTWKRVGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGETLKKQAMHDALQRLGVPELGVRLTPELGPEGVFTA
Ga0210406_109514662	3300021168	Soil	PRSWPKGALAVARKGGGFKVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRQAFLQLEA
Ga0210406_113048741	3300021168	Soil	SPRNWPKGALVIARNGGGFGVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWACSDLLFPNSKGEVLGKQSMHDALSRLSVQSQGPVRLTPELIRQAFLQLKA
Ga0210406_113773591	3300021168	Soil	RVTLWDKEVQTPSLALALLYWDKWRKRLDRPEQSRFFRKSWAYSPLLFPNSKGEALTKHSTRNALLRLKVPGEGRVRLTPGDIRRAFLQEGGSGR
Ga0210405_104109732	3300021171	Soil	PEQGSPRGWPKGALSIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPVLIRQAFLQLKA
Ga0210405_105346842	3300021171	Soil	MLACLCVAPEKGSPRRWAKTALTVTRKRVGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0210405_106642582	3300021171	Soil	WDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWACSDLLFPNSKGEVLGKQSMHDALSRLSVQSQGPVRLTPELIRQAFLQLKA
Ga0210405_108575552	3300021171	Soil	LRFKLWDRAVETQGLALALLYWHTWRERLDRPEQSRIYRKAWAYSDLLFPNSKGEALTKCAMRNALSRLSVRGEGRIRLTPGMVRQAFLQLEE
Ga0210396_106778081	3300021180	Soil	DLAILAGLCAAPEKGSPRRWPKSTLVVTRQGGVFRVTLWDKEVQTPSLALALLYWDKWRKRLDRPEQSRFFRKSWAHSPLLFPNSKGEALTKHSTRNALLRLKVPGEGRVRLTPGDIRRAFLQEGGSGR
Ga0210396_107291642	3300021180	Soil	NWVLDSIEKETKANRKALHFVRRDLAMLACLCVAPEKGSPRRWAKTALTVTRKRVGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0213873_101350341	3300021358	Rhizosphere	PKKPEDIPDYGSIRAWVIDRIEKGTKATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGVRAEGGVRLTPELVRKAFLQLEA
Ga0210385_108135811	3300021402	Soil	RRDLAMLACLCVAPEKGSPRSWPKGALVIARKGGGFGVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWACSDLLFPNSKGEVLGKQSMHDALSRLSVQSEGPVRLTPELIRQAFLQLKA
Ga0210387_117130271	3300021405	Soil	EKGSPRSWPKDALAVVRKAGRFEVKLWDKRVEAPGLALALLYWHTWRQRLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGKQAIHDALSRLSVQSEGGFRLTPELIRQAFLQLKA
Ga0210386_104207752	3300021406	Soil	RKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQLKA
Ga0210386_117679461	3300021406	Soil	ERLKRGSPRRWAKTALTVTRKRVGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0210383_110630572	3300021407	Soil	RKRVGDFEVKLWDKPVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0210384_103236322	3300021432	Soil	LTVTRKRVGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQRSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0210390_104954161	3300021474	Soil	MLACLCVAPEKGSPRSWPKGALAVVRKAGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWACSDLLFPNSKGEVLGKQSMHDALSRLSVQSEGPVRLTPELIRQAFLQLKA
Ga0210390_107508381	3300021474	Soil	MLACLCVAPEKGSPRRWAKTALTVTRKRVGDFEVKLWDKAVETPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELG
Ga0126371_109121671	3300021560	Tropical Forest Soil	TVEIPDLGPVRSWVMDRIEEETKTTRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVAREGGGFEVKLWDKPVETPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAECSVRLTPELVRKAFLQPEA
Ga0207684_103250632	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLEA
Ga0207646_114356791	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RRWPKGALAVARKGGGFKVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRQAFLQLEA
Ga0257168_10783871	3300026514	Soil	IDQIEKETRETRKALHFIRRDLAMLACLCVAPEQGSPRSWPKGALTIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQAEGGVRLTPELIRQAFLQRKA
Ga0209648_105464371	3300026551	Grasslands Soil	WSKDALSIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQIKA
Ga0208859_10467551	3300027069	Forest Soil	CVAPEQGSPRRWPKGALAIARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWACSNLLFPNSKGEVLGKQAIHDALSRLGVQSEGRVRLTPELIRQAFLRA
Ga0209524_11236801	3300027521	Forest Soil	ALTVTRKRVGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0209419_11252541	3300027537	Forest Soil	KALHFIRRDLAMVACLCIVPKKGSPRSWPKTALAVTRKGGGRFEVKLWDKPVEAPGLALTLLYWHSWRERLDRPEQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0209331_10125613	3300027603	Forest Soil	ARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQLKA
Ga0209446_11309051	3300027698	Bog Forest Soil	ALVVTRQGGGFHVKLWNRKVKTHCLALALLYWHSWRERLDRPEQSRIYRKAWAYSDLLFPNSKGEALTKHAIRNALLRLTVPGEGRVRLTPGEIRQAFMQLDV
Ga0209656_101286502	3300027812	Bog Forest Soil	ATRKALHFVRRDLAMLACLCVAPEKGSPRRWPKGALAIARKGGGFEVKLWDKPVEAPGLGLALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSKGEVLGKQAIHDALSRLRVQSEGRVRLTPELIRQAFLQLKA
Ga0209040_1000400413	3300027824	Bog Forest Soil	MATFLEFLESKLPANVRDSPDLEPVRTWMLERIEAETKAARKVSILIRRDLAMLAALCIAPERNSPRRWPKSALAVTRHQSGGFKIMLWDQEVESEGLSLALLYWHFWRERLGRPEQSRLYRKACAYSNLLFPNSKGKALEKQVLHDALSRLSVRFEGPLRLTPGLIRRAFIQLKA
Ga0209040_102477892	3300027824	Bog Forest Soil	FEVKLWDKPVETRGLVLTLLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGETLTKHAMRNALARLGIQAEGGVRLTPELIRQAFLELKA
Ga0209040_104072811	3300027824	Bog Forest Soil	HFIRRDLAMLACLCVAPEKGSPRRWPKGALAVARKAGGFEVRLWDKPVDTPGLALALLYWHTWRERLDRPEESRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGIEAEGVRLTPEALRKAFLQFEA
Ga0209040_105534511	3300027824	Bog Forest Soil	RAWVIDQIEKETRETRKAVHFIRRDLAMLACLCAAPERGSPRSWPKTALIVAPKQQGGGLEVILWDKPIDKPGLTLALLYWHSWRERLDRPEQSRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGIQAEGGVRLTPELVRKAFLQLEA
Ga0209039_100754452	3300027825	Bog Forest Soil	FIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKTWAYSNLLFPNSKGKVLGKQAIHDALSRLSVQSEGQDRLTPELIRQAFLQVKA
Ga0209039_101849461	3300027825	Bog Forest Soil	WPKTALIVAPKQQGGGLEVILWDKPIDKPGLTLALLCWHSWRERLDRPEQSRLHRKAWAYSDLLFPNSRGETLTKHAMRNALSRLGIQAEGGVRLTPELVRKAFLQLEA
Ga0209039_102127861	3300027825	Bog Forest Soil	LAPGRAAPRTWPKSALAVTRQGGGFEVKLWDKPVEAQGLALALLYWQTWRERLDRPEESRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLER
Ga0209526_108024001	3300028047	Forest Soil	ETKANRKALHFVRRDLAMLACLCVAPEKGSPRRWAKTALTVTRTRVGDFEVKLWDKAVETPGLALTLLYWHSWRERMDRPEQSRLHRKSWAYSQLLFPNSKGQALKKQAMHDALSRLGVPELGVRLTPELVRKAFLQLKA
Ga0222749_101953211	3300029636	Soil	RSWPKGALSIARKGGGFEVKLWDKPVEAPGLALALLYWHTWRERLDRPEQSRLHRKGWAYSDLLFPNSKGEVLGRQAIHDALSRLSVQGEGGVRLTPELIRQAFLQLKA
Ga0310915_107494641	3300031573	Soil	AMLACLCVAPEKGSPRSWPKGALAVARKAGGFEVKLWDKPVETPGPALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0310686_1079959311	3300031708	Soil	ALHFIRRDLAMLACLCVAPEQGSPRRWPKGALTIVRKGGGFEVKLWDKPVETPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSKGEVLGKQAIHDALSRLSVQGEGRVRLTPELIRQAFLELKA
Ga0307474_102048191	3300031718	Hardwood Forest Soil	KANRKALHFVRRDLAMLACLCVAPEKGSPRRWAKTALTVTRKRVGDFEVKLWDKAVEAPGLALTLLYWHSWRERLDRPQQSRLHRKAWAYSELLFPNSKGEALKKQAMHDALQRLGVPELGVRLTPELVRKAFLQLKA
Ga0306917_107130052	3300031719	Soil	RDLAMLACLCAAPGEGSLRSWPKAALSVTRQGGGYLVKLWDKPVEAPGLALALLYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEAFTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLQLAA
Ga0306918_109782121	3300031744	Soil	LACLCVAPEKGSPRSWPKGALAVARKAGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGTVRLTPELVRKAFLQLEA
Ga0307475_104731681	3300031754	Hardwood Forest Soil	IAMETKATRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFKVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLEA
Ga0310917_101685153	3300031833	Soil	TRQGGGYLVKLWDKPVEAPGLALALLYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLGLREGSCDKT
Ga0310917_110537561	3300031833	Soil	STRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVDTQGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGTVRLTPELVRKAFLQLEA
Ga0306925_101047674	3300031890	Soil	KMPKSTVEIPDLAPVRSWVMDRIEEETKTTRKALHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKAGGFEVKLWDKPVDTQGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0310910_105200052	3300031946	Soil	SWPKGALAVARKGGGFEVKLWDKPVETPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAECSVRLTPELVRKAFLQPEA
Ga0306926_107224841	3300031954	Soil	RSWPKAALSVTRQGGGYLVKLWDKPVEAPGLALALLYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVAGEGRVRLTPGLIRKAFLQLAA
Ga0306922_103740393	3300032001	Soil	GGYLVKLWDKPVEAPGLALALLYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLQLAA
Ga0310911_105073362	3300032035	Soil	KAALSVTRQGGGYLVKLWDKPVEAPGLALALLYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLQLAA
Ga0318533_101580543	3300032059	Soil	AGYLVKLWDKPVEAPGLALALVYWHTWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLGLREGSCDKT
Ga0306924_103069042	3300032076	Soil	LHFIRRDLAMLACLCVAPEKGSPRSWPKGALAVARKGGGFEVKLWDKPVETPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAECSVRLTPELVRKAFLQPEA
Ga0307471_1003993721	3300032180	Hardwood Forest Soil	CVAPEKGSPRSWPKGALAVARKGGGFKVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEALKKQAMHDALSRLGIQAEGSVRLTPELVRKAFLQLEA
Ga0335080_104276281	3300032828	Soil	LVVKRQKPGGFEVKLWDRTVENQELALTLLYWHTWRERLDRPEQSRIHRKAWAYSDLLFPNSKGEALTKYAMRNALSRLSVRGEGRVRLTPGMIRRAFLQV
Ga0310914_109426722	3300033289	Soil	LACLCVAPEKGSPRSWPKGALAVARKAGGFEVKLWDKPVDTPGLALALLYWHTWRERLDRPEQSRLHRKAWAYSDLLFPNSRGEVLKKQAMHDALSRLGFQAEGSVRLTPELVRKAFLQLEA
Ga0310914_117034441	3300033289	Soil	DLGPVRSWVMDRIEEETKATRKASHFIRRDLAMLACLCAAPGEGSLRSWPKAALTVTRQGGGYLVKLWDKPVEAPGLALALLYWHRWRERLDRPDQSRLHRKAWAYSGLLFPNSKGEALTKHALRNAVSRLSVPGEGRVRLTPGLIRKAFLQLAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094145

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences