Metagenome / Metatranscriptome Family F094154

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094154
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	70 residues
Representative Sequence	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Number of Associated Samples	76
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.10 %
% of genes near scaffold ends (potentially truncated)	29.25 %
% of genes from short scaffolds (< 2000 bps)	67.92 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.660 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.189 % of family members)
Environment Ontology (ENVO)	Unclassified (39.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.698 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 87.32% β-sheet: 0.00% Coil/Unstructured: 12.68%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00487	FA_desaturase	16.04
PF13188	PAS_8	7.55
PF01261	AP_endonuc_2	5.66
PF00196	GerE	4.72
PF00144	Beta-lactamase	4.72
PF13349	DUF4097	3.77
PF08668	HDOD	2.83
PF01904	DUF72	2.83
PF00005	ABC_tran	1.89
PF14026	DUF4242	1.89
PF00072	Response_reg	0.94
PF13609	Porin_4	0.94
PF07617	DUF1579	0.94
PF00873	ACR_tran	0.94
PF01145	Band_7	0.94
PF00892	EamA	0.94
PF07080	DUF1348	0.94
PF13657	Couple_hipA	0.94
PF13560	HTH_31	0.94
PF00990	GGDEF	0.94
PF00082	Peptidase_S8	0.94
PF13505	OMP_b-brl	0.94
PF08530	PepX_C	0.94
PF00326	Peptidase_S9	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	16.04
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	16.04
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	4.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	4.72
COG2367	Beta-lactamase class A	Defense mechanisms [V]	4.72
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.83
COG2936	Predicted acyl esterase	General function prediction only [R]	0.94
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
All Organisms	root	All Organisms	44.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
cellular organisms	root	All Organisms → cellular organisms	44.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.49 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	4.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	4.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	3.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	3.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.66 %
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	3.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10131656	Not Available	1748	Open in IMG/M
3300002245\|JGIcombinedJ26739_100052517	All Organisms → cellular organisms → Bacteria	3713	Open in IMG/M
3300002245\|JGIcombinedJ26739_101188670	Not Available	651	Open in IMG/M
3300002917\|JGI25616J43925_10218094	Not Available	728	Open in IMG/M
3300004091\|Ga0062387_101119432	Not Available	611	Open in IMG/M
3300005534\|Ga0070735_10738240	Not Available	581	Open in IMG/M
3300005602\|Ga0070762_10000446	All Organisms → cellular organisms → Bacteria → Proteobacteria	17290	Open in IMG/M
3300005602\|Ga0070762_10003212	All Organisms → cellular organisms → Bacteria → Proteobacteria	7808	Open in IMG/M
3300005712\|Ga0070764_10132132	Not Available	1359	Open in IMG/M
3300005994\|Ga0066789_10337081	Not Available	630	Open in IMG/M
3300006176\|Ga0070765_101173998	Not Available	725	Open in IMG/M
3300009633\|Ga0116129_1046321	Not Available	1363	Open in IMG/M
3300011269\|Ga0137392_11128264	Not Available	642	Open in IMG/M
3300012683\|Ga0137398_10289034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1100	Open in IMG/M
3300012929\|Ga0137404_10786860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	864	Open in IMG/M
3300014501\|Ga0182024_10046920	All Organisms → cellular organisms → Bacteria	6939	Open in IMG/M
3300014838\|Ga0182030_10000374	All Organisms → cellular organisms → Bacteria → Proteobacteria	80880	Open in IMG/M
3300015160\|Ga0167642_1025753	Not Available	973	Open in IMG/M
3300015206\|Ga0167644_1080264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1036	Open in IMG/M
3300019999\|Ga0193718_1023848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1359	Open in IMG/M
3300020021\|Ga0193726_1000005	All Organisms → cellular organisms → Bacteria → Proteobacteria	784561	Open in IMG/M
3300020021\|Ga0193726_1232711	Not Available	757	Open in IMG/M
3300020027\|Ga0193752_1098061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	1202	Open in IMG/M
3300020034\|Ga0193753_10000442	All Organisms → cellular organisms → Bacteria → Proteobacteria	40970	Open in IMG/M
3300020034\|Ga0193753_10066131	Not Available	1885	Open in IMG/M
3300020579\|Ga0210407_10627081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300020579\|Ga0210407_11262880	Not Available	553	Open in IMG/M
3300020580\|Ga0210403_10000013	All Organisms → cellular organisms → Bacteria → Proteobacteria	211522	Open in IMG/M
3300020580\|Ga0210403_10071080	All Organisms → cellular organisms → Bacteria	2795	Open in IMG/M
3300020580\|Ga0210403_10180856	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300020581\|Ga0210399_11242022	Not Available	590	Open in IMG/M
3300020582\|Ga0210395_10784500	Not Available	711	Open in IMG/M
3300020583\|Ga0210401_10000695	All Organisms → cellular organisms → Bacteria → Proteobacteria	40813	Open in IMG/M
3300020583\|Ga0210401_11057623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300021168\|Ga0210406_10585191	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300021170\|Ga0210400_10383560	Not Available	1158	Open in IMG/M
3300021170\|Ga0210400_11516530	Not Available	531	Open in IMG/M
3300021178\|Ga0210408_11233187	Not Available	570	Open in IMG/M
3300021180\|Ga0210396_10255577	Not Available	1557	Open in IMG/M
3300021180\|Ga0210396_11459304	Not Available	564	Open in IMG/M
3300021181\|Ga0210388_10010593	All Organisms → cellular organisms → Bacteria → Proteobacteria	7330	Open in IMG/M
3300021181\|Ga0210388_10015731	All Organisms → cellular organisms → Bacteria → Proteobacteria	6059	Open in IMG/M
3300021181\|Ga0210388_11119203	Not Available	671	Open in IMG/M
3300021181\|Ga0210388_11406797	Not Available	585	Open in IMG/M
3300021401\|Ga0210393_10005109	All Organisms → cellular organisms → Bacteria	10351	Open in IMG/M
3300021403\|Ga0210397_11170101	Not Available	598	Open in IMG/M
3300021405\|Ga0210387_10381142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1248	Open in IMG/M
3300021407\|Ga0210383_10005849	All Organisms → cellular organisms → Bacteria	10770	Open in IMG/M
3300021407\|Ga0210383_10916551	Not Available	746	Open in IMG/M
3300021475\|Ga0210392_10056074	All Organisms → cellular organisms → Bacteria → Proteobacteria	2448	Open in IMG/M
3300021475\|Ga0210392_10820265	Not Available	695	Open in IMG/M
3300021475\|Ga0210392_11079031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	601	Open in IMG/M
3300021477\|Ga0210398_10009065	All Organisms → cellular organisms → Bacteria → Proteobacteria	8929	Open in IMG/M
3300021478\|Ga0210402_10042839	All Organisms → cellular organisms → Bacteria	3939	Open in IMG/M
3300022714\|Ga0242671_1033552	Not Available	788	Open in IMG/M
3300023259\|Ga0224551_1013316	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300025627\|Ga0208220_1033014	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300025633\|Ga0208480_1002425	All Organisms → cellular organisms → Bacteria → Proteobacteria	6580	Open in IMG/M
3300025633\|Ga0208480_1017322	All Organisms → cellular organisms → Bacteria → Proteobacteria	2197	Open in IMG/M
3300026215\|Ga0209849_1091301	Not Available	538	Open in IMG/M
3300026294\|Ga0209839_10281782	Not Available	514	Open in IMG/M
3300026490\|Ga0257153_1125535	Not Available	502	Open in IMG/M
3300027117\|Ga0209732_1007223	Not Available	1840	Open in IMG/M
3300027528\|Ga0208985_1041008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300027545\|Ga0209008_1117589	Not Available	590	Open in IMG/M
3300027590\|Ga0209116_1100066	Not Available	636	Open in IMG/M
3300027676\|Ga0209333_1129165	Not Available	683	Open in IMG/M
3300027701\|Ga0209447_10112262	Not Available	749	Open in IMG/M
3300027895\|Ga0209624_10391623	Not Available	926	Open in IMG/M
3300027908\|Ga0209006_10971838	Not Available	677	Open in IMG/M
3300027908\|Ga0209006_11019445	Not Available	657	Open in IMG/M
3300027908\|Ga0209006_11021588	Not Available	657	Open in IMG/M
3300027986\|Ga0209168_10574890	Not Available	540	Open in IMG/M
3300028016\|Ga0265354_1001051	All Organisms → cellular organisms → Bacteria	4269	Open in IMG/M
3300028773\|Ga0302234_10065321	Not Available	1626	Open in IMG/M
3300028780\|Ga0302225_10124754	Not Available	1253	Open in IMG/M
3300029882\|Ga0311368_10615865	Not Available	763	Open in IMG/M
3300030053\|Ga0302177_10298527	Not Available	860	Open in IMG/M
3300030399\|Ga0311353_10251082	Not Available	1639	Open in IMG/M
3300030524\|Ga0311357_10082782	All Organisms → cellular organisms → Bacteria	3230	Open in IMG/M
3300030580\|Ga0311355_10090744	All Organisms → cellular organisms → Bacteria	3430	Open in IMG/M
3300030739\|Ga0302311_10077034	Not Available	2762	Open in IMG/M
3300030763\|Ga0265763_1001814	Not Available	1576	Open in IMG/M
3300030879\|Ga0265765_1017957	Not Available	838	Open in IMG/M
3300031022\|Ga0138301_1745801	Not Available	514	Open in IMG/M
3300031057\|Ga0170834_101299291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1367	Open in IMG/M
3300031057\|Ga0170834_110039853	Not Available	736	Open in IMG/M
3300031231\|Ga0170824_110609154	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300031233\|Ga0302307_10113688	Not Available	1413	Open in IMG/M
3300031474\|Ga0170818_104049976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	2477	Open in IMG/M
3300031708\|Ga0310686_101516626	All Organisms → cellular organisms → Bacteria	9633	Open in IMG/M
3300031708\|Ga0310686_104818285	All Organisms → cellular organisms → Bacteria	20096	Open in IMG/M
3300031708\|Ga0310686_104878123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	750	Open in IMG/M
3300031708\|Ga0310686_107912556	All Organisms → cellular organisms → Bacteria → Proteobacteria	5500	Open in IMG/M
3300031708\|Ga0310686_109951035	Not Available	1393	Open in IMG/M
3300031708\|Ga0310686_119276769	All Organisms → cellular organisms → Bacteria → Proteobacteria	9020	Open in IMG/M
3300031715\|Ga0307476_10115981	Not Available	1903	Open in IMG/M
3300031715\|Ga0307476_10640684	Not Available	788	Open in IMG/M
3300031718\|Ga0307474_10011485	All Organisms → cellular organisms → Bacteria → Proteobacteria	6418	Open in IMG/M
3300031718\|Ga0307474_10016487	All Organisms → cellular organisms → Bacteria → Proteobacteria	5354	Open in IMG/M
3300031823\|Ga0307478_10068931	All Organisms → cellular organisms → Bacteria → Proteobacteria	2670	Open in IMG/M
3300032174\|Ga0307470_10575048	Not Available	837	Open in IMG/M
3300032515\|Ga0348332_12352758	Not Available	663	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.23%
Aquatic	Environmental → Aquatic	2.83%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.85%
Peat	Environmental → Terrestrial → Peat	9.43%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.09%
Loam	Environmental → Terrestrial → Soil → Loam	16.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.43%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.26%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.66%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.94%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_101316563	3300001593	Forest Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESEMDVLAENSDRRYILELEIVALREEASRINARIADVLERDLQR*
JGIcombinedJ26739_1000525173	3300002245	Forest Soil	MPIGAQDXLEGLYGRQRLLSDEASRLESERDVLGQNSDRRYILEVEIVALREEATRISARIADVLERDLQR*
JGIcombinedJ26739_1011886702	3300002245	Forest Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDRLGQNSDRRYILEVEIVALREEASRISARIAD
JGI25616J43925_102180942	3300002917	Grasslands Soil	MPIGAQDHLEGLYGRQRLLSQEASRLESEQELLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR*
Ga0062387_1011194322	3300004091	Bog Forest Soil	MPIGAQDHLEGLYARQRLLSAEASRLESERDVLGQNSDRRYILEIEIVALREDASRINARIADVLERDLQR*
Ga0070735_107382401	3300005534	Surface Soil	MPIGARDHLESLYARQRLLSAEAARLESERDALDDDSNRSYILELEITALREEATRISARIADVIERDLQR*
Ga0070762_100004464	3300005602	Soil	VPIGAQDHLEGLYGRQRLLSEEAARLECERDLPGQNSDRRYILELEIVALREEASRISARIADVLERDLQR*
Ga0070762_100032122	3300005602	Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDRLGQNSDRRYILEVEIVALREEASRISARIADVLERDLQR*
Ga0070764_101321322	3300005712	Soil	MPIGAQDHLDVLYGRQRLLSEEATRLETERDLSEKNSDLRYILEVEIVALREEASRISARIADVLERDLQR*
Ga0066789_103370812	3300005994	Soil	VAYSSKMPIGAQDHLDGLYGRQRLLSAEASRLESERDLLGKNSDRRYILELEIVALREEASRINARIADVLERDLQR*
Ga0070765_1011739982	3300006176	Soil	RQRLLSEEASRLESERDLLGKNSDRRYILDVEIVALREEASRISARIADVLERDLQR*
Ga0116129_10463211	3300009633	Peatland	MPIGAQDHLEGLYGRQRLLSDEATRLESERDLLGQNSDRRYILEVEIVALREEASRISARIADVLERDLQR*
Ga0137392_111282642	3300011269	Vadose Zone Soil	MPIGAQDHLEGLYGRQRVLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR*
Ga0137398_102890342	3300012683	Vadose Zone Soil	MPIGAQDHLDSLYASQRVLSAEATRLESERDTLEADSNRYYILEVEITALREEATRISARIADILERDLQR*
Ga0137404_107868601	3300012929	Vadose Zone Soil	MPIGAQDHLESLYARQRVLSAEATRLESERDTLEADSNRYYILEVEITALREEATRISARIADILERDLQR*
Ga0182024_100469208	3300014501	Permafrost	MPIGAQDHLEVLYGRQRLLSGEASRLESERDQLSENSDRCYILELEIVALREEASRISARIADVLERDLQR*
Ga0182030_1000037451	3300014838	Bog	MPTGAHDRLNNLYVRQKLLFDEVARLEVERDALDPSSDRVYILELEIVALREEATRYSARIGDVLERDLER*
Ga0167642_10257532	3300015160	Glacier Forefield Soil	MPIGAQDHLEALYGRQRLLSDEATRLETDRDLSEKNSDRRYILELEIVALREEASRISARIADVLERDLQR*
Ga0167644_10802642	3300015206	Glacier Forefield Soil	MPIGAQDHLEVLYGRQRLLSDEATRLETERDLSEKNSDQRYILEIEIVALREEASRISARIADVLERDLQR*
Ga0193718_10238482	3300019999	Soil	MPIGAQDHLDSLYARQRILSAEATRLESERDTLETDSNRYYILEVEITALREEATRINARIADVLERDLQR
Ga0193726_1000005368	3300020021	Soil	MPIGAQDHLDVLYGRQRLLSDEATRLETERDLSEKNSDLRYILEIEIVALREEASRISARIADVLERDLQR
Ga0193726_12327112	3300020021	Soil	MPIGAQDHLESLYARQRVLSAEATRLESEREALEVDSTRYYILDVEITALREEATRISARIADIIERDLQR
Ga0193752_10980612	3300020027	Soil	MPIGAQDHLDSLYARQRVLSAEATLLESERDTLETDSNRYYILEVEITALREEATRINARIADILERDLQR
Ga0193753_100004423	3300020034	Soil	MPIGAQDHLESLYARQRVLSDEATRLESERDTLETGSNRYYILEVEITALREEATRISARIADVLERDLQR
Ga0193753_100661312	3300020034	Soil	MPIGAQDHLEALYGRQRLLSDEATRLETERDLSEKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210407_106270812	3300020579	Soil	MPIGAQDHLEGLYGRQRLLSAEASRLETERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210407_112628802	3300020579	Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGKNSDRRYILDVEIVALREEASRISARIADVLERDLQR
Ga0210403_1000001327	3300020580	Soil	MPIGAQDHLDGLYGRQRLLSAEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210403_100710802	3300020580	Soil	MPIGAQDHLEVLYGRQRLLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210403_101808562	3300020580	Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210399_112420222	3300020581	Soil	TTATRVSRVEYSSTMPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGKNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0210395_107845002	3300020582	Soil	VPIGAQDHLEGLYGRQRLLSEEAARLECERDLPGQNSDRRYILELEIVALREEASRISARIADVLERD
Ga0210401_1000069523	3300020583	Soil	MPIGAQDHLEGLYGRQRLLSQEASRLESERDLLGKNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0210401_110576231	3300020583	Soil	GAQDHLEVLYGRQRLLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210406_105851912	3300021168	Soil	MPIGAQDHLDGLYGRQRLLTDEATRLETERDLSEKNSDRRYILDLEIVALREEASRISARIADVLERDLQR
Ga0210400_103835601	3300021170	Soil	MPIGAQDHLEVLYGRQRLLSEEASRLESEQDLLGRNSDRRYILELEIVALREEASRISAR
Ga0210400_115165302	3300021170	Soil	MPIGAQDHLEGLYGRQRLLSEEATHLECERDLPGQTSDRRYILELEIVALREE
Ga0210408_112331871	3300021178	Soil	MPIGAQDHLEGLYGRQRLLSAEASRLESERDLLGQNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0210396_102555771	3300021180	Soil	RQRLLSDEASRLESERDRLGQNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0210396_114593042	3300021180	Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDRLGQNSDRRYILEVEIVALREEASRISARIADVL
Ga0210388_100105935	3300021181	Soil	VPIGAQDHLEGLYGRQRLLSEEAARLECERDLPGQNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210388_100157312	3300021181	Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDRLGQNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0210388_111192031	3300021181	Soil	MPIGAQDHLDVLYGRQRLLSEEATRLETERDLSEKNSDLRYILEVEIVALREEASRISARIADVLERDLQR
Ga0210388_114067972	3300021181	Soil	MPIGAQDHLEVLYARQRLLSDEATRLETERDLSQKNSDQHYILEIEIVALREEASRISARIADVLERDLQR
Ga0210393_100051092	3300021401	Soil	MPIGAQDHLEGLYGRQRLLSEEATHLECERDLPGQTSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0210397_111701012	3300021403	Soil	MPIGAQDHLEGLYGRQRLLSQEASRLESERDLLGKNSDRRYILDVEIVALREEASRISARIADVLERDLQR
Ga0210387_103811422	3300021405	Soil	MPIGAQDHLEVLYGRQRLLSDEATRLETERDLSEKNSDLRYILEIEIVALREEASRISARIADVLERDLQR
Ga0210383_100058495	3300021407	Soil	MPIGAQDHLEGLYGRQRLLSQEASRLESERDVLGKNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0210383_109165512	3300021407	Soil	HLEGLYGRQRLLSEEASRLESERDLLGKNSDRRYILDVEIVALREEASRISARIADVLERDLQR
Ga0210392_100560742	3300021475	Soil	MPIGAQDHLEALYGRQRLLSDEAMRLETERDLSEKNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0210392_108202651	3300021475	Soil	YGRQRLLSEEAARLEVEQDLSEKNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0210392_110790311	3300021475	Soil	MILLADVNIKQTMPIGAQDHLESLYARQRVVSAEATRLESELDALEEDSDRSYILELEITALREEATRIGARIADVIERDLQR
Ga0210398_100090654	3300021477	Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERELLGQNCDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0210402_100428392	3300021478	Soil	MLKMRSPTPAGDSHARPPVAYSSVMPIGAQDHLEGLYGRQRLLSAEASRLESERDLLGKNSDRRYILDLEIVALREEASRISARIADVLERDLQR
Ga0242671_10335523	3300022714	Soil	QDHLEGLYGRQRLLSEEAARLECERDLPGQNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0224551_10133162	3300023259	Soil	MPIGAQDHLEVLYGRQRLLSGEASRLESERDQLSENSDRCYILELEIVALREEASRISARIADVLERDLQR
Ga0208220_10330143	3300025627	Arctic Peat Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERDQLGQNSDRRYILEIEIVALREEASRISARIADVLE
Ga0208480_10024253	3300025633	Arctic Peat Soil	MPIGAQDHLEGLYGRQRLFSEEASRLESERDQLGQNSDRRFILEIEIIALREEASRISARIADVLERDLQR
Ga0208480_10173223	3300025633	Arctic Peat Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERDQLGQNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0209849_10913012	3300026215	Soil	RQRLLSAEASRLESERDLLGKNSDRRYILELEIVALREEASRINARIADVLERDLQR
Ga0209839_102817822	3300026294	Soil	DGLYGRQRLLSAEASRLESERDLLGKNSDRRYILELEIVALREEASRINARIADVLERDLQR
Ga0257153_11255351	3300026490	Soil	MPIGAQDHLEGLYGRQRVLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0209732_10072232	3300027117	Forest Soil	MPIGAQDHLEGLYGRQRLLSDEATRLESERDLLGQNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0208985_10410082	3300027528	Forest Soil	MPIGAQDHLDVLYGRQRLLSDEATRLETERDLSEKNSDLRYILEIEIVALREEASRISARIADVLERDLQ
Ga0209008_11175892	3300027545	Forest Soil	MGPPARRPISLAPQDHLEGLYGRQRLLSDEASRLESERDVLGQNSDRRYILEVEIVALREEATRISARIADVLERDLQR
Ga0209116_11000662	3300027590	Forest Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERNLLSQNSDRRYILEVEIVALREEATR
Ga0209333_11291651	3300027676	Forest Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESEMDVLAENSDRRYILELEIVALREEASRINARIADVLERDLQR
Ga0209447_101122622	3300027701	Bog Forest Soil	DHLEGLYARQRLLSAEASRLEAERDLLGQNSDRRYILEIEIVALREEATRISARIADVLERDLQR
Ga0209624_103190173	3300027895	Forest Soil	MPIGAHDHLDALYAKQRLLIEEATRLENEHDALGSEGHEADRRYILDLEVTALREESTRISSRIADVLERDLQR
Ga0209624_103916232	3300027895	Forest Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDVLGQNSDRRYILEVEIVALREEATRISARIADVLERDLQR
Ga0209006_109718381	3300027908	Forest Soil	MPIGAQDRLEGLYGRQRLLSDEASRLESERDVLGQNSDRRYILEVEIVALREEATRISARIADVLERDLQR
Ga0209006_110194452	3300027908	Forest Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDRLGQNSDRRYILEVEIVALREEASRISARIADV
Ga0209006_110215881	3300027908	Forest Soil	MPIGAQDHLEGLYGRQRLLSDEATRLESERDLLGQNSDRRYILEVEIVALREEASRISARIADV
Ga0209168_105748901	3300027986	Surface Soil	MPIGARDHLESLYARQRLLSAEAARLESERDALDDDSNRSYILELEITALREEATRISARIADVIERDLQR
Ga0265354_10010513	3300028016	Rhizosphere	MPIGAQDHLEGLYARQRLLSAEASRLESERDLLGQNSDRRYILEIEIIALREEASRISARIADVLERDLQR
Ga0302234_100653211	3300028773	Palsa	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLSQNSDRRYILELEIVALREAATRISAR
Ga0302225_101247542	3300028780	Palsa	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLSQNSDRRYILELEIVALREAATRISARIADVLERDLQR
Ga0311368_106158652	3300029882	Palsa	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLSQNSDRRYILELEIVALREAATRISARIADVLERDLQ
Ga0302177_102985272	3300030053	Palsa	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLSQNSDRRYLLELEIVALREAATRISARIADVLERDLQR
Ga0311353_102510821	3300030399	Palsa	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLSQNSDRRYILELEIVALREAATRISARIADVLERD
Ga0311357_100827821	3300030524	Palsa	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLSQNSDRRYILELEIVALREAATRISARIADVL
Ga0311355_100907442	3300030580	Palsa	MPIGAQDHLEGPYGRQRLLSEEASRLESERDLLSQNSDRRYILELEIVALREAATRISARIADVLERDLQR
Ga0302311_100770343	3300030739	Palsa	MPIGAQDHLEGLYGRQRLLSEEASERDLLSQNSDRRYILELEIVALREAATRISARIADVLERDLQR
Ga0265763_10018142	3300030763	Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERELPGQNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0265765_10179572	3300030879	Soil	MPIGAQDHLEGLYARQRLLSAEASRLESERDLLGQNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0138301_17458011	3300031022	Soil	QLHMPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGKHSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0170834_1012992913	3300031057	Forest Soil	YSWGMPIGAQDHLDVLYGRQRLLTDEATRLETERDACERNSDRRYILDLEIVALREEASRISARIADVLERDLQR
Ga0170834_1067261192	3300031057	Forest Soil	MVSRFFAVAMRIYVIYQLHMPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0170834_1100398532	3300031057	Forest Soil	MRIYVIYQLHMPIGAQDHLEGLYGRQRVLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0170824_1106091542	3300031231	Forest Soil	MPIGAQDHLDSLYASQRVLSAEASRLETERDTLAAHSDRYYILDVEITALREEATRISARIADILERDLQR
Ga0170824_1190316212	3300031231	Forest Soil	VVSRSFAVAMRIYVIYQLHMPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGKNSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0302307_101136881	3300031233	Palsa	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLSQNSDRRYILELEIVALREAATRISARIADVLERDL
Ga0170818_1040499762	3300031474	Forest Soil	MLMQSSAPGAYSYVMPIGAQDHLESLYARQRVLSAEATHLESERDTLESDSTRYYILEVEITALREESTRISARIADIIERDLQR
Ga0310686_1015166262	3300031708	Soil	MPIGAQDHLESMYARQRLLSEEASRLESERDLLGQNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0310686_10481828513	3300031708	Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERDLLGQNSDRRYILEIEIVALREEATRISARIADVLERDLQR
Ga0310686_1048781232	3300031708	Soil	VPTGAHDSVDKLYGLQNLLFDEVARLEAERDALDANSERVYILELEIAALREEATRHSARIADILERDLER
Ga0310686_1079125562	3300031708	Soil	MPIGAQDHLEGLYGRRRLLSEEASRLESERDLLGQNSDRRYILEVEIVALREEASRINARIADVLERDLQR
Ga0310686_1099510352	3300031708	Soil	MPIGAQDHLEGLYGRQRLLSEEASRLESERDRLGQNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0310686_1192767694	3300031708	Soil	MPIGAQDHLEGLYARQRLLSAEASRLESERDLLGQNSDGRYILEIEIVALREEASRISARIADVLERDLQR
Ga0307476_101159812	3300031715	Hardwood Forest Soil	MWRATAARDSRVAYSSEMPIGAQDHLEGLYGRQRLLSEEASRLESERDLVGLSSDRRYILELEIVALREEASRISARIADVLERDLQR
Ga0307476_106406842	3300031715	Hardwood Forest Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDLPGQNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0307474_100114851	3300031718	Hardwood Forest Soil	MPIGAQDHLEGLYGRQRLLSDEASRLESERDLLGRNSDRRYILEVEIVALREEASRISARIADVLERDLQR
Ga0307474_100164875	3300031718	Hardwood Forest Soil	MPIGAQDHLEVLYGRQRLLSDEATRLETERDLSEKNSDRRYILEIEVVALREEASRISARIADVLERDLQR
Ga0307478_100689312	3300031823	Hardwood Forest Soil	MPIGAQDHLESLYARQRLLSAEAARLESERDLLGQNSDRRYILEIEIVALREEASRISARIADVLERDLQR
Ga0307470_105750481	3300032174	Hardwood Forest Soil	MPIGAQDHLEALYGRQRLLSEEAARLESERDLGKDSDRRYILEVEIVALREEASRISARIADVLER
Ga0348332_123527582	3300032515	Plant Litter	HLEGLYARQRLLSAEASRLESERDLLGQNSDGRYILEIEIVALREEASRISARIADVLERDLQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094154

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences