NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F094201

Metagenome / Metatranscriptome Family F094201

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094201
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 79 residues
Representative Sequence MSELARLRDDVIPPPDLVARVMTRVSEPRLPSVWQWLNRPFLIEIRISPIVLIGLALALGTAFVYVGATIR
Number of Associated Samples 81
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 50.94 %
% of genes near scaffold ends (potentially truncated) 26.42 %
% of genes from short scaffolds (< 2000 bps) 79.25 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (86.792 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(16.981 % of family members)
Environment Ontology (ENVO) Unclassified
(25.472 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.660 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.58%    β-sheet: 0.00%    Coil/Unstructured: 42.42%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF08281Sigma70_r4_2 57.55
PF00563EAL 14.15
PF01712dNK 3.77
PF02518HATPase_c 1.89
PF00986DNA_gyraseB_C 0.94
PF01751Toprim 0.94
PF07635PSCyt1 0.94
PF10282Lactonase 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 14.15
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 14.15
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 14.15
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 14.15
COG1428Deoxyadenosine/deoxycytidine kinaseNucleotide transport and metabolism [F] 3.77
COG0187DNA gyrase/topoisomerase IV, subunit BReplication, recombination and repair [L] 0.94

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.79 %
UnclassifiedrootN/A13.21 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459002|F0B48LX02H3VUANot Available501Open in IMG/M
3300002568|C688J35102_118424225All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300002568|C688J35102_120908767All Organisms → cellular organisms → Bacteria2217Open in IMG/M
3300003323|rootH1_10205726All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300005329|Ga0070683_100222910All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1792Open in IMG/M
3300005336|Ga0070680_101182547All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium661Open in IMG/M
3300005338|Ga0068868_100791303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes855Open in IMG/M
3300005341|Ga0070691_10306875All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300005436|Ga0070713_101637093All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300005533|Ga0070734_10005347All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales11415Open in IMG/M
3300005541|Ga0070733_10074482All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2143Open in IMG/M
3300005541|Ga0070733_10626943All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300005563|Ga0068855_100014234All Organisms → cellular organisms → Bacteria → Proteobacteria9582Open in IMG/M
3300005591|Ga0070761_10813698All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium588Open in IMG/M
3300005602|Ga0070762_10280752All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300005602|Ga0070762_10354780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes936Open in IMG/M
3300005602|Ga0070762_10998121Not Available574Open in IMG/M
3300005610|Ga0070763_10523718All Organisms → cellular organisms → Bacteria → Caldiserica/Cryosericota group → Caldiserica → environmental samples → Caldiserica bacterium enrichment culture clone B31168680Open in IMG/M
3300005614|Ga0068856_100048045All Organisms → cellular organisms → Bacteria4204Open in IMG/M
3300005614|Ga0068856_100314107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1585Open in IMG/M
3300005614|Ga0068856_100336692All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1527Open in IMG/M
3300005616|Ga0068852_100783872Not Available967Open in IMG/M
3300005712|Ga0070764_11080928Not Available508Open in IMG/M
3300005944|Ga0066788_10022513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1402Open in IMG/M
3300005993|Ga0080027_10003501All Organisms → cellular organisms → Bacteria5923Open in IMG/M
3300005993|Ga0080027_10189446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes800Open in IMG/M
3300005993|Ga0080027_10213387All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium755Open in IMG/M
3300005994|Ga0066789_10000044All Organisms → cellular organisms → Bacteria → Proteobacteria32238Open in IMG/M
3300006175|Ga0070712_100778336All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300006176|Ga0070765_101705397All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium592Open in IMG/M
3300006176|Ga0070765_101775360Not Available579Open in IMG/M
3300006638|Ga0075522_10009526All Organisms → cellular organisms → Bacteria → Proteobacteria6544Open in IMG/M
3300009093|Ga0105240_11880749All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium623Open in IMG/M
3300009551|Ga0105238_10453640Not Available1279Open in IMG/M
3300009551|Ga0105238_11399150All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium727Open in IMG/M
3300010371|Ga0134125_10004645All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria15691Open in IMG/M
3300010373|Ga0134128_10117911All Organisms → cellular organisms → Bacteria3012Open in IMG/M
3300010398|Ga0126383_11492155All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium766Open in IMG/M
3300010401|Ga0134121_11018143Not Available814Open in IMG/M
3300010869|Ga0126359_1002819All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300010869|Ga0126359_1134337All Organisms → cellular organisms → Bacteria1401Open in IMG/M
3300012984|Ga0164309_10547574All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300013105|Ga0157369_11375032All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium719Open in IMG/M
3300014968|Ga0157379_10394710All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300020021|Ga0193726_1272903All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300020070|Ga0206356_10645253All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium565Open in IMG/M
3300020081|Ga0206354_11120011All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300020582|Ga0210395_10622133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes810Open in IMG/M
3300021180|Ga0210396_10500358All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300021181|Ga0210388_10004409All Organisms → cellular organisms → Bacteria → Proteobacteria11027Open in IMG/M
3300021181|Ga0210388_10215924All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300021181|Ga0210388_11288534All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300021377|Ga0213874_10161274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes788Open in IMG/M
3300021401|Ga0210393_10699907All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium826Open in IMG/M
3300021401|Ga0210393_10877195All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300021402|Ga0210385_10022260All Organisms → cellular organisms → Bacteria4030Open in IMG/M
3300021402|Ga0210385_10252667All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300021403|Ga0210397_10589322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes849Open in IMG/M
3300021404|Ga0210389_10009285All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales7603Open in IMG/M
3300021405|Ga0210387_10015637All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5876Open in IMG/M
3300021405|Ga0210387_11720943All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium530Open in IMG/M
3300021474|Ga0210390_11298061All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300021475|Ga0210392_10678334All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300021478|Ga0210402_11380137All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300022714|Ga0242671_1067426All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300025494|Ga0207928_1037503All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300025627|Ga0208220_1030653All Organisms → cellular organisms → Bacteria1667Open in IMG/M
3300025917|Ga0207660_11037249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes669Open in IMG/M
3300025921|Ga0207652_10148131Not Available2101Open in IMG/M
3300025924|Ga0207694_10792712All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium800Open in IMG/M
3300025928|Ga0207700_11679238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes561Open in IMG/M
3300025944|Ga0207661_10125656All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2190Open in IMG/M
3300026078|Ga0207702_10138459All Organisms → cellular organisms → Bacteria2199Open in IMG/M
3300026078|Ga0207702_10292853All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1543Open in IMG/M
3300026078|Ga0207702_11239779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes740Open in IMG/M
3300026078|Ga0207702_11608032All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium643Open in IMG/M
3300026281|Ga0209863_10001478All Organisms → cellular organisms → Bacteria9085Open in IMG/M
3300026291|Ga0209890_10000168All Organisms → cellular organisms → Bacteria → Proteobacteria30946Open in IMG/M
3300027826|Ga0209060_10004590All Organisms → cellular organisms → Bacteria → Proteobacteria10652Open in IMG/M
3300027879|Ga0209169_10339653All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300027879|Ga0209169_10523122All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300027884|Ga0209275_10118550All Organisms → cellular organisms → Bacteria1374Open in IMG/M
3300027884|Ga0209275_10146299All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300027905|Ga0209415_10356557Not Available1213Open in IMG/M
3300028563|Ga0265319_1042199All Organisms → cellular organisms → Bacteria1535Open in IMG/M
3300028563|Ga0265319_1248319All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300028577|Ga0265318_10117166All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium979Open in IMG/M
3300028906|Ga0308309_10593606Not Available961Open in IMG/M
3300028906|Ga0308309_10913876All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium762Open in IMG/M
3300029984|Ga0311332_10664284All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium826Open in IMG/M
3300030114|Ga0311333_10254919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1382Open in IMG/M
3300031057|Ga0170834_108649975All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300031128|Ga0170823_13343065All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300031249|Ga0265339_10152100All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300031595|Ga0265313_10084725All Organisms → cellular organisms → Bacteria1433Open in IMG/M
3300031595|Ga0265313_10437614Not Available509Open in IMG/M
3300031680|Ga0318574_10900867All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300031938|Ga0308175_103006535Not Available525Open in IMG/M
3300031939|Ga0308174_10342573All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300032074|Ga0308173_11624846Not Available608Open in IMG/M
3300032770|Ga0335085_11682624All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300032893|Ga0335069_11264673All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium805Open in IMG/M
3300032896|Ga0335075_10248968All Organisms → cellular organisms → Bacteria2050Open in IMG/M
3300032896|Ga0335075_11578309Not Available541Open in IMG/M
3300032954|Ga0335083_10003648All Organisms → cellular organisms → Bacteria19861Open in IMG/M
3300034130|Ga0370494_074304All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium857Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil16.98%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil13.21%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.49%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere5.66%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.72%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.77%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil3.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.83%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.89%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.89%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.94%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.94%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.94%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.94%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.94%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010869Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025494Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025627Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028563Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaGHost-AssociatedOpen in IMG/M
3300028577Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaGHost-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031595Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaGHost-AssociatedOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300034130Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E1_025182402170459002Grass SoilVSGAEQQRRTTDRMTELRRLRDDVTPPHDLVARVMTRVSEPRMPSFWQWLNRPVQLELRLSPVFLIGLALALAAGFIYVGATLR
C688J35102_11842422523300002568SoilMSELARLRDDVIPPPDLVARVMTRVSQPRLPSFWQWLNRPFVIEIRMSPIVLIGLALALGTAFVYVGATIR*
C688J35102_12090876723300002568SoilMSELARLRDDVIPPPDLVARVMTRVSEPRLPSVWQWLNRPFLIEIRLSPIVIIGLALALGTAFVYVGATIR*
rootH1_1020572623300003323Sugarcane Root And Bulk SoilVNADPRAQEPGRLADLAALCDVDPPPNLVARVMTRVSSEPRLPSVWQWLRRPFVIEVRISPLVLIGMALALGAAFVYVGATLK*
Ga0070683_10022291023300005329Corn RhizosphereMSELAHLRDDVIPPPDLVARVMTRVSEPRLPSVWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR*
Ga0070680_10118254723300005336Corn RhizosphereVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLCRPFVIEVRISPLVLIGMALALGAAFVYVGATLR*
Ga0068868_10079130323300005338Miscanthus RhizosphereMSELARLRDDVIPPPDLVARVMTRVSQPRLPSVWQWLNRPFLIEIRISPIVLIGLALALGTAFVYVGATIR*
Ga0070691_1030687523300005341Corn, Switchgrass And Miscanthus RhizosphereMVELARLRDDVIPPPDLVARVMTRVSQPRLPSVWQWLNRPFLIEIRISPIVLIGLALALGTAFVYVGATIR*
Ga0070713_10163709323300005436Corn, Switchgrass And Miscanthus RhizosphereVSSEAPDQGRVAELARLREVDLPPNLVARVMTRVSEPRLPSVWQWLHRPFVIEVRISPLLLIAIALALGIAFVYVGATLK*
Ga0070734_1000534723300005533Surface SoilVSTVEQPPAARGRMPELRRLRDDVTPPPDLVARVMTRVSEPRLPSIWQWLNRPVLLELRISPLVMIGLAMALGAAFVYVGATLR*
Ga0070733_1007448233300005541Surface SoilVNVEPRNNRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR*
Ga0070733_1062694323300005541Surface SoilVSGAEPRRVSDRRMTELRRLRDDVAPPPDLVARVMTKVSEPRVPSFWQWMNRPVQFELRLSPIFLIGLALVLTAGFIYVGATLR*
Ga0068855_10001423433300005563Corn RhizosphereVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLRRPFVIEVRISPLVLIGMALALGAAFVYVGATLR*
Ga0070761_1081369823300005591SoilMTELARLRDDVAPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRITPIVIIGLALALGTAFVYVGATIK*
Ga0070762_1028075213300005602SoilDRTRGGHIVNPATGRPPAMIEILEQPISELAHLREVDPPANLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALIGLGLVVIAAFVFVGATLR*
Ga0070762_1035478023300005602SoilMTELARLRDEVTPPPDLVARVMTRVSEPRLPSVWQWLRRPFLIEIRISPILLIGLAMALGAAFVYVGATLR*
Ga0070762_1099812113300005602SoilVNVESRNNRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK*
Ga0070763_1052371823300005610SoilMIEILEQPISELAHLREVDPPANLVARVMTRLSEPRLPSLWQWLRRPFCIEIRISPLALIGLGLVVIAAFVFVGATLR*
Ga0068856_10004804543300005614Corn RhizosphereVTSAGDPGRLDDLAGLREVDPPANLVARVMTRVSEPRLPSVWQWLRRPFVIEVRISPLLLIGIAMALGAAFVYVGATLK*
Ga0068856_10031410723300005614Corn RhizosphereRLREVDLPPNLVARVMTRVSEPRLPSVWQWLRRPFVIEVRISPLLLIAIALALGVAFVYVGATLK*
Ga0068856_10033669213300005614Corn RhizosphereRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLRRPFVIEVRISPLVLIGMALALGAAFVYVGATLR*
Ga0068852_10078387223300005616Corn RhizosphereVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLCRPFVIEVRISPLVLIGMA
Ga0070764_1108092813300005712SoilRPRHAARPDRTRGGHIVNPATGRPPAMIEILEQPISELAHLREVDPPANLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALIGLGLVVIAAFVFVGATLR*
Ga0066788_1002251323300005944SoilVSRAAERPPAMIEILEQPISELADLREVDPPANLVARVMTRLSEPRLPSLWQWLRRPFRLEIRLSPLTLIVLALVLAAGFVLVGATLR*
Ga0080027_1000350123300005993Prmafrost SoilVSRAAERSPAMVEILEQPISELADLREVDPPANLVARVMTRLSEPRLPSLWQWLRHPFCIEIRLSPLALIGLALVLTAAFVLVGATLR*
Ga0080027_1018944623300005993Prmafrost SoilLAELASLREVIPPANLVARVMIRLSEPQTPSVWQWLRRPFRIEIRLSPLALIGLALALAAAFVLVGATLR*
Ga0080027_1021338723300005993Prmafrost SoilVNVESPNRRISELARLRDDVTPPPDLVARVLTRVSEPRLPSVWQWLLRPFLIEIRLSPLLLIGLALALGAAFVYVGATLR*
Ga0066789_1000004483300005994SoilMSELARLRDDVTPPHDLVARVMTRVSEPRLPSLWQWLNRPFLIELRISPIVLIGLALALGTAFVYVGATIK*
Ga0070712_10077833613300006175Corn, Switchgrass And Miscanthus RhizosphereVTPPADLVARVMTRVSEPRMPSFWQWLSRPVQLELRLSPIILIGLALALAAAFIYVGATLR*
Ga0070765_10170539713300006176SoilMSELARLREDINPPPDLVARVMTRVSEPRLPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATMR*
Ga0070765_10177536013300006176SoilVSPATGGPPAMIEILEQPISELAHLREVDPPVNLVARVMTRLSEPRLPSLWQWLRRPFCIEIRISPLALIGLGLVVIAAFVFVGATLR*
Ga0075522_1000952623300006638Arctic Peat SoilVSPATERPPAVIEILEQPISELAHLREVDPPVNLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALVGLGLVVIAAFVFVGATLR*
Ga0105240_1188074923300009093Corn RhizosphereVNGVEQPRAPGGRIPELRRLRDEATPPPDLVARVMTRVSEPRLPSIWQWLRRPILVELRLSPLILIGLALALGAAFVYVGATIK*
Ga0105238_1045364023300009551Corn RhizosphereMTPEAPDHGRVAELARLREVDLPPNLVARVMTRVSEPRLPSVWQWLRRPFVIEVRISPLLLIAIALALGVAFVYVGATLK*
Ga0105238_1139915023300009551Corn RhizosphereMSELAHLRDDVIPPPDLVARVMTRVSEPRLPSLWQWLNRPFLIEIRISPIVLIGLALALGTAFVYVGATIR*
Ga0134125_10004645103300010371Terrestrial SoilVNGVDQPRAAGGRIPELRRLRDEATPPPDLVARVMTRVSEPRLPSIWQWLRRPILVELRLSPLILIGLALALGAAFIYVGATIK*
Ga0134128_1011791123300010373Terrestrial SoilVNGVEQPRAPGGRIPELRRLRDEATPPPDLVARVMTRVSEPRLPSIWQWLRRPILVELRLSPMILIGLALALGAAFVYVGATIK*
Ga0126383_1149215513300010398Tropical Forest SoilVSSGAQQRRATERMSELRRLRDDVTPPPDLVARVMTRVSEPRTPSFWQWMNRPVQFELRLSPIFLVGLAMALAAGFIYVGATLR*
Ga0134121_1101814313300010401Terrestrial SoilVSGAEHRRPTERMTELRRLQDDVRPPPDLVARVMTRVSEPRMPSFWQWLNRPVQLEMRLSPIFLIGLALAL
Ga0126359_100281913300010869Boreal Forest SoilMPSMIDILEQPISELAHLREVDPPANLVARVMTRLSEPRLPSLWQWLRRPFCIEIRLSPLAVIGLALVLTAAFVFVGATLR*
Ga0126359_113433723300010869Boreal Forest SoilMSELARLRDDVTPPPDLVARVMTRVSEPRLPSLWQWLNRPLLIEIRISPIVIIGLALALGTAFVYVGATIR*
Ga0164309_1054757423300012984SoilMSELARLRDDVIPPPDLVARVMTRVSEPRLPSVWQWLNRPFLIEIRISPIVLIGLALALGTAFVYVGATIR*
Ga0157369_1137503213300013105Corn RhizosphereVSGAEHRRAAERIPELRRLRDDVAPPPDLVARVMTRVSEPRMPSFWQWLNRPVQLELRLSPIFLIGLALALAAGFIYVG
Ga0157379_1039471023300014968Switchgrass RhizosphereVIPPPDLVARVMTRVSEPRLPSVWQWLNRPFLIEIRISPIVLIGLALALGTAFVYVGATIR*
Ga0193726_127290313300020021SoilVSPATDRPPAMIDILEQPISELAHLRDVVPPPNLVARVMTRLAEPRLPSLWQWLRHPFCIEIRLSPLALIGLALVLAAAFVFVGATLK
Ga0206356_1064525313300020070Corn, Switchgrass And Miscanthus RhizosphereVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLRRPFVIEVRISPLVLIGMALALGAAFVYVGATLR
Ga0206354_1112001123300020081Corn, Switchgrass And Miscanthus RhizosphereLVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLCRPFVIEVRISPLVLIGMALALGAAFVYVGATLR
Ga0210395_1062213323300020582SoilMTELARLRDDVAPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0210396_1050035823300021180SoilVWGDLVNVESPNNRISELARLRDDVTPPPDLVARVMTRVSQPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0210388_1000440933300021181SoilVNVESPNNRISELARLRDDVSPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0210388_1021592423300021181SoilMTELARLRDDVAPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRITPIVIIGLALALGTAFVYVGATIK
Ga0210388_1128853413300021181SoilRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0213874_1016127423300021377Plant RootsVTAHPQEPGRLADLARLAEVDPPPNLVARVMTRVSEPRLPSIWDWLRRPFVIEVRISPLVLIGIALALGAAFVYVGATLK
Ga0210393_1069990723300021401SoilMIEILEQPISELAHLRDVDPPANLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALIGLGLVVIGAFVFVGATL
Ga0210393_1087719523300021401SoilVNVESPNNRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0210385_1002226023300021402SoilVSPATGGPPAMIEILEQPISELAHLRELDPPVNLVARVMTRLSEPRLPSLWQWLRRPFCIEIRISPLALIGLGLVVIAAFVFVGATLR
Ga0210385_1025266723300021402SoilVNVESRNNRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0210397_1058932223300021403SoilVNGVDHPRAAGGRIPELRRLRDEATPPPDLVARVMTRVSEPRLPSIWQWLRRPVLLELRLSPLVLIGLALALGAAFIYVGATIK
Ga0210389_1000928533300021404SoilVNVESPNNRMSELARLRDDVTPPADLVARVMTRVSQPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0210387_1001563733300021405SoilVWGHLVNVESPNNRMSELARLRDDVAPPADLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0210387_1172094323300021405SoilVNVESRNNRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWMNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0210390_1129806113300021474SoilNVESPNNRISELARLRDDVSPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0210392_1067833423300021475SoilVNVESPNNRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0210402_1138013713300021478SoilARLRDDVTPPPDLVARVMTRVSEPRLPSLWQWLHRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0242671_106742623300022714SoilVNVESRNNRISELARLRDDVSPPPDLVARVMTRVSEPRFPSLWQWLNRPFLIEIRITPIVIIGLALALGTAFVYVGATIK
Ga0207928_103750323300025494Arctic Peat SoilMSELARLRDDVTPPPDLVARVMTRVSEPRLPSVWQWLLRPFLIEIRLSPLLLIGLALALGAAFVYVGATLR
Ga0208220_103065323300025627Arctic Peat SoilVSPATERPPAVIEILEQPISELAHLREVDPPVNLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALVGLGLVVIAAFVFVGATLR
Ga0207660_1103724923300025917Corn RhizosphereVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLCRPFVIEVRISPLVLIGMALALGAAFVYVGATLR
Ga0207652_1014813113300025921Corn RhizosphereVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLLRPFVIEVRISPLVLIGMALALGAAFVYVGATLR
Ga0207694_1079271223300025924Corn RhizosphereMTPEAPDHGRVAELARLREVDLPPNLVARVMTRVSEPRLPSVWQWLRRPFVIEVRISPLLLIAIALALGVAFVYVGATLK
Ga0207700_1167923823300025928Corn, Switchgrass And Miscanthus RhizosphereVSGAEHRRAAERIPELRRLRDDVAPPPDLVARVMTRVSEPRMPSFWQWLNRPVQLELRLSPIFLVGLALALAAGFIYVGATLR
Ga0207661_1012565623300025944Corn RhizosphereMSELAHLRDDVIPPPDLVARVMTRVSEPRLPSVWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0207702_1013845923300026078Corn RhizosphereVTSAGDPGRLDDLAGLREVDPPANLVARVMTRVSEPRLPSVWQWLRRPFVIEVRISPLLLIGIAMALGAAFVYVGATLK
Ga0207702_1029285313300026078Corn RhizosphereARSASRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLRRPFVIEVRISPLVLIGMALALGAAFVYVGATLR
Ga0207702_1123977923300026078Corn RhizosphereVTGAGDPGRLDDLAGLREVEPPANLVARVMTRVSEPRLPSVWQWLRRPFVIEVRISPLLLIGIAMALGAAFVYVGATLK
Ga0207702_1160803213300026078Corn RhizosphereVNADPRAQEPGRLADLAALGDVDPPPNLVARVMTRVSSEPRLPSLWQWLCRPFVIEVRISPLVLIGMALALGAA
Ga0209863_1000147863300026281Prmafrost SoilMVEILEQPISELADLREVDPPANLVARVMTRLSEPRLPSLWQWLRHPFCIEIRLSPLALIGLALVLTAAFVLVGATLR
Ga0209890_10000168143300026291SoilMSELARLRDDVTPPHDLVARVMTRVSEPRLPSLWQWLNRPFLIELRISPIVLIGLALALGTAFVYVGATIK
Ga0209060_1000459073300027826Surface SoilVSTVEQPPAARGRMPELRRLRDDVTPPPDLVARVMTRVSEPRLPSIWQWLNRPVLLELRISPLVMIGLAMALGAAFVYVGATLR
Ga0209169_1033965323300027879SoilVNPATGRPPAMIEILEQPISELAHLREVDPPANLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALIGLVAPFIFKYAA
Ga0209169_1052312213300027879SoilRDEVTPPPDLVARVMTRVSEPRLPSVWQWLRRPFLIEIRISPILLIGLAMALGAAFVYVGATLR
Ga0209275_1011855023300027884SoilMIEILEQPISELAHLREVDPPANLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALIGLGLVVIAAFVFVGATLR
Ga0209275_1014629923300027884SoilMTELARLRDEVTPPPDLVARVMTRVSEPRLPSVWQWLRRPFLIEIRISPILLIGLAMALGAAFVYVGATLR
Ga0209415_1035655713300027905Peatlands SoilVNGVGQPRATGRDVRISELRRLRDDVTPPPDLVARVMTRVSEPRTPSFWQWLNRPVQLEFRLSPMILIGLALALAAAFIYVGAT
Ga0265319_104219923300028563RhizosphereVSRAAERSPAMVEILEQPISELADLREVDPPANLVARVMTRLSEPRLPSLWQWLRRPFCIEIRLSPLALIGLGLVLTAAFVFVGATLR
Ga0265319_124831913300028563RhizosphereVNVESPNNRISELARLRDDVTLPPDLVARVMTRVSEPRLPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0265318_1011716613300028577RhizosphereVNVESRNKRISELARLRDDVTLPPDLVARVMTRVSEPRFPSLWQWMNRPFVIEIRISPIVLIGLALALGTAFVYVGATIR
Ga0308309_1059360623300028906SoilMIEILEQPISELAHLREVDPPVNLVARVMTRLSEPRLPSLWQWLRRPFCIEIRISPLALIGLGLVVIAAFVFVGATLR
Ga0308309_1091387613300028906SoilMSELARLREDINPPPDLVARVMTRVSEPRLPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIK
Ga0311332_1066428413300029984FenVNVESPNNRISELAHLRDEVAPPPDLVARVMTRVSEPRLPSLWQWLNRPFLIEIRISPVVIIALALALGAAFVYVGATIR
Ga0311333_1025491923300030114FenVNVESPNNRISELAHLRDDVTPPPDLVARVMTRVSEPRLPSLWQWLNRPFLIELRISPIVIIALALALGAAFVYVGATIR
Ga0170834_10864997523300031057Forest SoilVNVESRNNRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWMNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0170823_1334306513300031128Forest SoilRISELARLRDDVTPPPDLVARVMTRVSEPRFPSLWQWMNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0265339_1015210023300031249RhizosphereVESPNHRISELARLRDDVAPPPDLVARVMTRVSEPRLPSLWQWLNRPFLIEIRISPIVIIGLALALGTAFVYVGATIR
Ga0265313_1008472523300031595RhizosphereLNPAADRPPAMIEILEQPISELAHLREVDPPANLVARVMTRLSEPRLPSVWQWLRRPFCIEIRISPLALIGLGLVAIAAFVFVGATLR
Ga0265313_1043761423300031595RhizosphereVPAAPDGRIAELARLREVKPPPDLVARVMTRLSEPRLPSVWQWLRRPFLIEIRISPLVLIGLALGVGAAFVYVGATLR
Ga0318574_1090086713300031680SoilVTPDRRIDELARLREVEPPPNLVARVMTRVSEPRLPSLWQWLRRPFVIEVRISPLLLIAIAFALGVAFV
Ga0308175_10300653513300031938SoilGAHGGDVVSGAEQRRAAERSELRRLRDDVTPPPDLVARVMTRVSEPRMPSFWQWLNRPVQLELRLSPIFLVGLALALAAGFIYVGATLR
Ga0308174_1034257323300031939SoilVNGVDQPRAAGGRIPELRRLRDEATPPPDLVARVMTRVSEPRLPSIWQWLRRPILVELRLSPLILIGLALALGAAFVYVGATIK
Ga0308173_1162484613300032074SoilVSGAEQRRAAERSELRRLRDDVTPPPDLVARVMTRVSEPRMPSFWQWLNRPVQLELRLSPIFLVGLALALAAGFIYVGATLR
Ga0335085_1168262423300032770SoilVSGAEPGRLHDQRIAELRRLRDDVTPPPDLVARVMTRVSEPRVPSFWQWLNRPVQLELRLSPIFLIGLAMALAAAFIYVGATLR
Ga0335069_1126467323300032893SoilLSGAEQRRATERMPELRRLRDDVTPPPDLVARVMTRVSEPRMPSFWQWLNRPVQLELRLSPILLIGLALALTAAFIYVGATLR
Ga0335075_1024896823300032896SoilVRVERPGPTVEAADGQIAELARLREVNPPPDLVARVMTRLSEPRLPSLWQWLRRPFLIEIRISPLVLIGLALGLGAAFVYVGATLR
Ga0335075_1157830923300032896SoilPERRFVELARLREVEPPPNLVARVMTRVSEPRLPSLWQWLRRPFVIEVRISPLLVIAVALAVGVAFVYVGATLK
Ga0335083_10003648133300032954SoilVTPDRRIDELARLREVEPPPNLVARVMTRVSEPRLPSLWQWLRRPFVIEVRISPLLLIAIAFALGVAFVYVGATLR
Ga0370494_074304_548_7633300034130Untreated Peat SoilMSELARLRDDVTPPHDLVARVMTRVSEPRLPSLWQWLNRPFLIEIRISPIVLIGLALALGAAFVYVGATIK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.