Metagenome Family F094273

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094273
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	75 residues
Representative Sequence	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSG
Number of Associated Samples	80
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.70 %
% of genes near scaffold ends (potentially truncated)	36.79 %
% of genes from short scaffolds (< 2000 bps)	90.57 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.887 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.924 % of family members)
Environment Ontology (ENVO)	Unclassified (31.132 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.434 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.55% β-sheet: 28.43% Coil/Unstructured: 49.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
d.296.1.2: PF0168-like	d1yb3a1	1yb3	0.67633
d.3.1.10: Avirulence protein Avrpph3	d1ukfa1	1ukf	0.67138
f.69.1.1: Perfringolysin N-terminal-like	d3hvna3	3hvn	0.61834
d.134.1.1: Nitrite and sulphite reductase 4Fe-4S domain-like	d3c7bb5	3c7b	0.60995
d.134.1.0: automated matches	d6c3ma2	6c3m	0.60864

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01068	DNA_ligase_A_M	10.38
PF02735	Ku	3.77
PF12773	DZR	2.83
PF01035	DNA_binding_1	1.89
PF11799	IMS_C	1.89
PF00313	CSD	1.89
PF11953	DUF3470	1.89
PF13191	AAA_16	0.94
PF05627	AvrRpt-cleavage	0.94
PF00293	NUDIX	0.94
PF03781	FGE-sulfatase	0.94
PF13586	DDE_Tnp_1_2	0.94
PF00805	Pentapeptide	0.94
PF13518	HTH_28	0.94
PF02357	NusG	0.94
PF13683	rve_3	0.94
PF05876	GpA_ATPase	0.94
PF04311	DUF459	0.94
PF11185	DUF2971	0.94
PF03733	YccF	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	10.38
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	10.38
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	3.77
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.89
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	1.89
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.94
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.94
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	0.94
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.83 %
Unclassified	root	N/A	47.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.89 %
Unclassified	root	N/A	47.17 %
Viruses	superkingdom	All Organisms → Viruses	0.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.89 %
Unclassified	root	N/A	47.17 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.77 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.08 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.77 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	22.64 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.94 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %
Parvularculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.92 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.72 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.89 %
Chelatococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae	0.94 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.94 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %
Parvularculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae	0.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.92 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.89 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Chelatococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus	0.94 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.94 %
Parvularcula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.92 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.89 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.94 %
Chelatococcus daeguensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	0.94 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.94 %
unclassified Parvularcula	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula	0.94 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	17.92 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.72 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.89 %
Parvularcula sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	0.94 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.94 %
Chelatococcus daeguensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	0.94 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.94 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13601585	Not Available	658	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101765702	Not Available	637	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1031105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10100552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1037471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300000789\|JGI1027J11758_13057801	Not Available	576	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10112847	Not Available	570	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10129344	Not Available	526	Open in IMG/M
3300000955\|JGI1027J12803_102150885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300000956\|JGI10216J12902_106523116	Not Available	688	Open in IMG/M
3300000956\|JGI10216J12902_107169143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	749	Open in IMG/M
3300000956\|JGI10216J12902_108734954	Not Available	684	Open in IMG/M
3300000956\|JGI10216J12902_112080310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300005172\|Ga0066683_10795942	Not Available	550	Open in IMG/M
3300005332\|Ga0066388_100649253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → unclassified Parvularcula → Parvularcula sp.	1670	Open in IMG/M
3300005332\|Ga0066388_102155811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1004	Open in IMG/M
3300005332\|Ga0066388_102633251	Not Available	916	Open in IMG/M
3300005332\|Ga0066388_106452766	Not Available	591	Open in IMG/M
3300005468\|Ga0070707_100708292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300005713\|Ga0066905_100252869	All Organisms → cellular organisms → Bacteria → Proteobacteria	1355	Open in IMG/M
3300005713\|Ga0066905_101187465	Not Available	681	Open in IMG/M
3300005713\|Ga0066905_101727328	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005764\|Ga0066903_100813583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1674	Open in IMG/M
3300005764\|Ga0066903_101005091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1525	Open in IMG/M
3300005764\|Ga0066903_101104683	Not Available	1462	Open in IMG/M
3300005764\|Ga0066903_102131962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1079	Open in IMG/M
3300005764\|Ga0066903_105135500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300006173\|Ga0070716_100965545	Not Available	672	Open in IMG/M
3300006173\|Ga0070716_101217949	Not Available	605	Open in IMG/M
3300006175\|Ga0070712_100272301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Chelatococcaceae → Chelatococcus → Chelatococcus daeguensis	1361	Open in IMG/M
3300006791\|Ga0066653_10670436	Not Available	533	Open in IMG/M
3300006797\|Ga0066659_10781730	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	788	Open in IMG/M
3300006844\|Ga0075428_102699372	Not Available	506	Open in IMG/M
3300006854\|Ga0075425_102541176	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009012\|Ga0066710_100120747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3568	Open in IMG/M
3300009098\|Ga0105245_13240433	Not Available	504	Open in IMG/M
3300009100\|Ga0075418_10607253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1177	Open in IMG/M
3300009137\|Ga0066709_102294448	Not Available	740	Open in IMG/M
3300010038\|Ga0126315_10567602	Not Available	730	Open in IMG/M
3300010046\|Ga0126384_11577167	Not Available	617	Open in IMG/M
3300010048\|Ga0126373_11025677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300010358\|Ga0126370_11398546	Not Available	660	Open in IMG/M
3300010360\|Ga0126372_10628863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1035	Open in IMG/M
3300010361\|Ga0126378_11315444	Not Available	817	Open in IMG/M
3300010366\|Ga0126379_11444830	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010366\|Ga0126379_12018846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	679	Open in IMG/M
3300010375\|Ga0105239_13317747	Not Available	524	Open in IMG/M
3300010376\|Ga0126381_100293300	Not Available	2224	Open in IMG/M
3300010399\|Ga0134127_11950073	Not Available	665	Open in IMG/M
3300012022\|Ga0120191_10062226	Not Available	682	Open in IMG/M
3300012022\|Ga0120191_10087224	Not Available	621	Open in IMG/M
3300012198\|Ga0137364_11078123	Not Available	605	Open in IMG/M
3300012198\|Ga0137364_11154143	Not Available	582	Open in IMG/M
3300012204\|Ga0137374_10108041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2600	Open in IMG/M
3300012204\|Ga0137374_10452476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1008	Open in IMG/M
3300012208\|Ga0137376_11316280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	613	Open in IMG/M
3300012353\|Ga0137367_10875739	Not Available	620	Open in IMG/M
3300012355\|Ga0137369_10016097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7194	Open in IMG/M
3300012355\|Ga0137369_10530593	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300012355\|Ga0137369_10983351	Not Available	561	Open in IMG/M
3300012358\|Ga0137368_10328244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300012925\|Ga0137419_10759389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	791	Open in IMG/M
3300012929\|Ga0137404_11657245	Not Available	594	Open in IMG/M
3300012930\|Ga0137407_12100140	Not Available	539	Open in IMG/M
3300012971\|Ga0126369_11782265	Not Available	704	Open in IMG/M
3300012971\|Ga0126369_12654346	Not Available	585	Open in IMG/M
3300016294\|Ga0182041_10603121	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300016319\|Ga0182033_10537672	Not Available	1008	Open in IMG/M
3300016387\|Ga0182040_10477723	Not Available	992	Open in IMG/M
3300016404\|Ga0182037_10943282	Not Available	750	Open in IMG/M
3300016445\|Ga0182038_11600532	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300021560\|Ga0126371_11920206	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	711	Open in IMG/M
3300025915\|Ga0207693_10376238	Not Available	1111	Open in IMG/M
3300025916\|Ga0207663_11504507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300026310\|Ga0209239_1005632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	7068	Open in IMG/M
3300026310\|Ga0209239_1283008	Not Available	572	Open in IMG/M
3300026331\|Ga0209267_1207633	Not Available	742	Open in IMG/M
3300028878\|Ga0307278_10245269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300031544\|Ga0318534_10064796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2062	Open in IMG/M
3300031545\|Ga0318541_10055323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2048	Open in IMG/M
3300031561\|Ga0318528_10362656	Not Available	778	Open in IMG/M
3300031640\|Ga0318555_10428397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031719\|Ga0306917_10411696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056	Open in IMG/M
3300031723\|Ga0318493_10285572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	888	Open in IMG/M
3300031724\|Ga0318500_10316774	Not Available	766	Open in IMG/M
3300031747\|Ga0318502_10324801	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031771\|Ga0318546_10941167	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031781\|Ga0318547_10333862	Not Available	924	Open in IMG/M
3300031805\|Ga0318497_10069100	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300031845\|Ga0318511_10605455	Not Available	511	Open in IMG/M
3300031879\|Ga0306919_10628378	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300031890\|Ga0306925_10106829	All Organisms → cellular organisms → Bacteria	2983	Open in IMG/M
3300031890\|Ga0306925_10208899	All Organisms → cellular organisms → Bacteria → Proteobacteria	2106	Open in IMG/M
3300031912\|Ga0306921_10884348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1015	Open in IMG/M
3300031941\|Ga0310912_10964413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300031945\|Ga0310913_10358618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300031947\|Ga0310909_10591353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300031947\|Ga0310909_11382669	Not Available	564	Open in IMG/M
3300032044\|Ga0318558_10177129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1034	Open in IMG/M
3300032052\|Ga0318506_10315404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300032059\|Ga0318533_10227172	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M
3300032076\|Ga0306924_11778045	Not Available	643	Open in IMG/M
3300032261\|Ga0306920_100274134	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300032261\|Ga0306920_102716318	Not Available	676	Open in IMG/M
3300032261\|Ga0306920_104096917	Not Available	527	Open in IMG/M
3300033289\|Ga0310914_11344371	Not Available	617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.28%
Host-Associated	Host-Associated	4.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.28%
Plants	Host-Associated → Plants	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.30%
Loam	Environmental → Terrestrial → Soil → Loam	16.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.83%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_136015851	3300000363	Soil	MTNDRPWRLADLKFVPSGNGREKATINGIRIVREDGRYWILTPNGPLWSNIDERGVDPALNYLFGKRKQEQSSQ*
INPhiseqgaiiFebDRAFT_1017657021	3300000364	Soil	MTNDRPWRLADLTFVPLGDGRERATINGEIEIVRQNGRYWIMTPNGPQWHNIGREGVDPALNFLFIERER*
AF_2010_repII_A01DRAFT_10311052	3300000580	Forest Soil	VTNDRPWRLANLSFVPSGNGRERAIINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ*
AF_2010_repII_A1DRAFT_101005522	3300000597	Forest Soil	VTNDRPWRLANLSFVPSGNGRERATINGVEIVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ*
AF_2010_repII_A100DRAFT_10374712	3300000655	Forest Soil	VTNDRPWRLANLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ*
JGI1027J11758_130578012	3300000789	Soil	MTNDRPWRLADLTFVPLGDGRERAAINGMVEIVRQNGRYWIRTPNGPQWHNIGKEGVDPALNFLFLEREG*
AF_2010_repII_A001DRAFT_101128472	3300000793	Forest Soil	VTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPLWSNVDERGADPALNYLFEKRKQERQSSQ*
AF_2010_repII_A001DRAFT_101293441	3300000793	Forest Soil	VTNDCPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSG
JGI1027J12803_1021508852	3300000955	Soil	VTNRRPWRLADLTFLPAGEGRERAEINGVKIFRRNGRYWIMTNDGPQWSDIDDQSVDPALDYLFQR*
JGI10216J12902_1065231162	3300000956	Soil	MSTRPSNRARRLADLTFVPFGDGGERATIDGGEVVRENGRYWVMTVNGPQWFDIDEREVDPALSGL*
JGI10216J12902_1071691432	3300000956	Soil	VEVTNDRPWRLAELSFIPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ*
JGI10216J12902_1087349543	3300000956	Soil	VTDDRPWRLSDLTFVPAEVGRERATLENVEVVRENGRYWIITPNGPLWSNIDERGVDPAL
JGI10216J12902_1120803103	3300000956	Soil	VSSDQPWRLADLTFVPLGDGTERATINGVEVIRENGRYWVITPNGPIWSNIDERGVDPALNYLFGQKRQQQEQSSQ*
Ga0066683_107959422	3300005172	Soil	GQEAVTNDRPWRLTDLTFVLAGDGRDRATINGVEVIRENGRYWIITPSGPIWSNIDERGVDPALQYLFGKKQQQEQSS*
Ga0066388_1006492533	3300005332	Tropical Forest Soil	MRKTEVAVTNERPWRLADLTFVPLGDGRERAAINGEVEIVRQNGRYWIMTPNGPQWHNIGREGVDPALNFLFIERER*
Ga0066388_1021558111	3300005332	Tropical Forest Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNDPLWSNIDERGVDPALNYLF*
Ga0066388_1026332511	3300005332	Tropical Forest Soil	MEVTNERPWRLADLSFVASGNGREKATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFGKRKQEQSSQ*
Ga0066388_1064527662	3300005332	Tropical Forest Soil	VTNDRPWRLADLSFVPSGNGREKATINGVEVVKENGRYWIVTPNGPLWSNIDERGVDPALNYLFEKRRQERQS*
Ga0070707_1007082922	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTNDRPWRLADLTFVPSGEGRERATINGVEVVRENGRYWIVTPNGPLWSNIDERGVDPALNYLFGKRKQEQSSQ*
Ga0066905_1002528693	3300005713	Tropical Forest Soil	VTNDRPWRLADLTFVPSRGGREKATINGVRVVRQNGRYWIMTRNGPQWSNIDEQAVDPALNYLFGERERWR*
Ga0066905_1011874651	3300005713	Tropical Forest Soil	VTNDRPWRLADLSFVPSGNGREKATINGVEVVKENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEGQSGQ*
Ga0066905_1017273281	3300005713	Tropical Forest Soil	TNDRPWRLADLSFVPSGNGREKATINGVEVVKENGRYWIITANGPLWSNIDERGVDPALNYLFGKRKQEQSTR*
Ga0066903_1008135831	3300005764	Tropical Forest Soil	MTDDRPWRLTDLTFVPMGDGRERATINGEVEIVRQNGRYWITTPNGPQWHDIGREGVDPALNFLFIERER*
Ga0066903_1010050912	3300005764	Tropical Forest Soil	VTNDRPWRLADLTFVPAEAGRERATLEGVEVVRENGRYWIITANGPLWSNIDERGVDPALNYLFGKRQQEQSSR*
Ga0066903_1011046834	3300005764	Tropical Forest Soil	VTNDRPWRLADLTFVPSGGGRERATINGVRVVRQNGRYWIMTRNGPQWSNIDEQAVDPALHYLFGERERWR*
Ga0066903_1021319623	3300005764	Tropical Forest Soil	VTNDRPWRLADLSFVPSGNGREKATINGVEIVKENGRYWIITANGPLWTNIDERGVDPALNYLFEKRRQERQSGQ*
Ga0066903_1051355002	3300005764	Tropical Forest Soil	VTNDRPWRLEDLTFVPSGDGRERATINGVEVVRRNKRYWISSPVRQYSDIAEKDVNAALNYLFGERERWR*
Ga0070716_1009655451	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AVTNDRPWRLTDLTFVPVGDGRERATIDSVEVIRENGRYWIITPSGPIWSNIDERGVDPALNYLFGKKRQQQEQSSQ*
Ga0070716_1012179492	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LADLSFVPSGNGRETATINGVEVVKENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQERQSGQ*
Ga0070712_1002723014	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTDEKPWRLADLTFVPLGDGRERATINGVEIVRLNGRYWIRAQNGPLWDDIDERGVDPALHYLFGERERWR*
Ga0066653_106704362	3300006791	Soil	VTNDRPWCLAGLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDERGVDPALNYLFGNRKQEQQSSQ*
Ga0066659_107817301	3300006797	Soil	VTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPSGPIWSNIDERGVNPALNYLFEKREQEQQSSQ*
Ga0075428_1026993721	3300006844	Populus Rhizosphere	MTNDRPWRLADLTFVPSGQGRERATINGVEVVKENGRYWITTPNGPLWSNIDERGVDPALTYLFGKRKQEQSGQ*
Ga0075425_1025411761	3300006854	Populus Rhizosphere	SGRGLGLGQVAVTNDRPWRLTDLTFVPAGDGRERAAINGVEVIRENGRYWIITPSGPIWSNIDERGVDPALNYLFGKKRQQQEQSSQ*
Ga0066710_1001207474	3300009012	Grasslands Soil	VTNDRPWRLAELSFIPSGNGRESATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0105245_132404331	3300009098	Miscanthus Rhizosphere	RLVGFSADQGEVIAGRQVAVTNDRPWRLTDLTFVPAGNGRERATINGVEVIRENGRYWIITPSGPIWSNIDERGVDPALNYLFGKKRQQQEQSSQ*
Ga0075418_106072533	3300009100	Populus Rhizosphere	VSPDPNDRPWRLTDLTFVPAGNGRERATINGVEVIRENGRYWIITPSGPIWSNIDERGVDPALNYLFGKKQQQQEQSSQ*
Ga0066709_1022944481	3300009137	Grasslands Soil	VEVKNDRPWRLAELSFIPSGNGRESATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ*
Ga0126315_105676021	3300010038	Serpentine Soil	VTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDERGVDPALNYLFGKRKQEQQSSQ*
Ga0126384_115771671	3300010046	Tropical Forest Soil	MQGRGDDGSVTNDRPWRLADLSFVPSGNGREKATINGVEVVKENGRYWIVTPNGPLWSNIDERGVDPALNYLFEKRRQERQS*
Ga0126373_110256771	3300010048	Tropical Forest Soil	RLGSPYRSGRSRHWIKTKNQSEVEVTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ*
Ga0126370_113985462	3300010358	Tropical Forest Soil	MEVTNERPWRLADLSFVPSGNGREKATINGVEVVKENGRYWIITPNGPLWSNIDERGVDPALNYLFEKQRQERQSGQ*
Ga0126372_106288631	3300010360	Tropical Forest Soil	PARSIFSEAEEDWEVEVTNDCPWRLAELSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNVDERGVDPALNYLFEKRRHEQQSGQ*
Ga0126378_113154441	3300010361	Tropical Forest Soil	VTNDRPWRLAELSFVPSGNGREKATINGVEVVKENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQERQSGQ*
Ga0126379_114448302	3300010366	Tropical Forest Soil	VAVTNDRPWRLADLTFVPSGGGRERATINGVEVVRRNKRYWISSPVRQYSDIAEKDVNAALNYLFGERERWR*
Ga0126379_120188462	3300010366	Tropical Forest Soil	VTNDRPWRLANLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRKQERQSSP*
Ga0105239_133177471	3300010375	Corn Rhizosphere	QVAVTNDRPWRLTDLTFVPAGNGRERATINGVEVIRENGRYWIITPSGPIWSNIDERGVDPALNYLFGKKRQQQEQSSQ*
Ga0126381_1002933005	3300010376	Tropical Forest Soil	VTNDRPWRLADLTFVPSGSGRERATINGVRVVRQNGRYWIMTRNGPQWSNIDEQAVNPALNYLFGERERWR*
Ga0134127_119500732	3300010399	Terrestrial Soil	VGFSADQGEVIAGRQVAVTNDRPWRLTDLTFVPAGNGRERATINGVEVIRENGRYWIITPSGPIWSNIDERGVDPALNYLFGKKRQQQEQSSQ*
Ga0120191_100622261	3300012022	Terrestrial	VTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPSGPIWSNIDERGVDPALNYLFEKRKQEQQSSQ*
Ga0120191_100872242	3300012022	Terrestrial	MINDRPWRLADLKFVPSGNGREKATINGVRIVRENGRYWILTPNGPLWSNIDERGVDPALNYLFGKRK*
Ga0137364_110781231	3300012198	Vadose Zone Soil	MTNDRPWRLADLTFVPLGDGRERATINGEVEIVRQNGRYWITTPNGPQWHDIGREGVDPALNFLFIERER*
Ga0137364_111541431	3300012198	Vadose Zone Soil	VTNDRPWCLAGLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDELGVDPALNYLFEKRKQEQQSSQ*
Ga0137374_101080414	3300012204	Vadose Zone Soil	MNDCPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDERGVDPALNYLFEKRKQEQQSSQ*
Ga0137374_104524761	3300012204	Vadose Zone Soil	MTNDRPWRLADLKFVPSGNGREKATINGVRIVRENGRYWILTPNGPLWSNIDERGVDPALNYLFGKRKQEQSSQ*
Ga0137376_113162802	3300012208	Vadose Zone Soil	VEVTNDRPWRLAELSFIPSGNGRESATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ*
Ga0137367_108757392	3300012353	Vadose Zone Soil	GTGLDQQEPEVTNDRPWRLADLSFVPSGNGRERATINGVDFVRENGRYWITTPNGPLWSNIDERGVDPALNYLFEKRRQERQSDQ*
Ga0137369_100160971	3300012355	Vadose Zone Soil	EVEMTNDRPWRLADLKFVPSGNGREKATINGVRIVRENGRYWILTPNGPLWSNIDERGVDPALNYLFGKRKQEQSSQ*
Ga0137369_105305933	3300012355	Vadose Zone Soil	EVEMTNDRPWRLADLKFVPSGNGREKATINGVRIVRENGRYWILTPNGPLWSNIDERGVDPALNYLFGKRKQEQSGQ*
Ga0137369_109833512	3300012355	Vadose Zone Soil	RGRGHCFGFAVGTGLDQQEPEVTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWITTPNGPLWSNIDERGVDPALNYLFEKRRQERQSDQ*
Ga0137368_103282443	3300012358	Vadose Zone Soil	VTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDERGVDPALNYLFEKRKQEQQSSQ*
Ga0137419_107593891	3300012925	Vadose Zone Soil	MTNDRPWRLADLTFVPLGDGRERAAINGIEVIRENGRYWIITRNGPVWSNIDERGVDPALNYLFLKK
Ga0137404_116572452	3300012929	Vadose Zone Soil	VTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDERGVDPALNYLFEKRRQEQQSGQ*
Ga0137407_121001401	3300012930	Vadose Zone Soil	MTNDRPWRLADLTFVPSGEGRETATIDGVEVVRENGRYWIMTPNGPLWSNIDERGVDPALNYLFGKRKQEQSNQ*
Ga0126369_117822651	3300012971	Tropical Forest Soil	LGLTEVEVTNDRPWRLADLTFVPAEAGRERATLEGVEVVRENGRYWIITANGPLWSNIDERGVDPALNYLFGKRQQEQSSR*
Ga0126369_126543462	3300012971	Tropical Forest Soil	MTDDRPWRLTDLTFVPMGDGRERATINGEVEIVRQNGRYWITTSNGPQWHDIGREGVDPAFNFLFIERER*
Ga0182041_106031213	3300016294	Soil	LEGEVEVTNDRPWRLADLSFAPSGNGRERATINGAEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRKQERQSSQ
Ga0182033_105376721	3300016319	Soil	QSEVEVTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALYYLFEKRRQEQQSGQ
Ga0182040_104777231	3300016387	Soil	LGLTEVEVTNDRPWRLADLTFVPAEAGRERATLEGVEVVRENGRYWIITTNGPLWSNIDERGVDPALNYLFGKRQQEQSSR
Ga0182037_109432822	3300016404	Soil	GLGEREVAVTNDRPWRLADLTFVPSGSGRGRATINGVRVVRQNGRYWIMTRNGPQWSNIDEQAVDPALNYLFGERERWR
Ga0182038_116005321	3300016445	Soil	MIDRSARPASPAASRHWVKSKNQSEVEVTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0126371_119202061	3300021560	Tropical Forest Soil	VTNDCPWRLADLSFVPSGNGRERATIDGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0207693_103762382	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTDEKPWRLADLTFVPLGDGRERATINGVEIVRLNGRYWIRAQNGPLWDDIDERGVDPALHYLFGERERWR
Ga0207663_115045071	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VTDDQSWRLANLTFVPSGDGKETATINGVEVIRENGRYWIVTPAGPIWSNIDERGVDPALNYLFEKKREQQSSQ
Ga0209239_100563210	3300026310	Grasslands Soil	VTNDRPWRLAELSFIPSGNGRESAAINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0209239_12830082	3300026310	Grasslands Soil	VTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDERGVDPALNYLFGKRKQEQSRG
Ga0209267_12076333	3300026331	Soil	ELSFIPSGNGRESAAINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0307278_102452692	3300028878	Soil	VEVTNDRPWRLADLSFAPSGNGRERATINGVEVVRENGRYWITTPNGPIWSNIDERGVDPALNYLFEKRKQEQQSNQ
Ga0318534_100647962	3300031544	Soil	VTNDCPWRLADVSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0318541_100553231	3300031545	Soil	VTNDCPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0318528_103626561	3300031561	Soil	LGLTEVEVTNDRPWRLADLTFVPAEAGRERATLEGVEVVRENGRYWIITANGPLWSNIDERGVDPALNYLFGKRQQEQSSR
Ga0318555_104283971	3300031640	Soil	LGEREVAVTNDRPWRLEDLTFVPSGDGRERATINGVEVVRRNKRYWISSPVRQYSDIAEKDVNAALNYLFGERGQWR
Ga0306917_104116962	3300031719	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0318493_102855721	3300031723	Soil	HWVKSKNQSEVEVTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALYYLFEKRRQEQQSGQ
Ga0318500_103167742	3300031724	Soil	VTNDRPWRLADLTFVPAEAGRERATLEGVEVVRENGRYWIITANGPLWSNIDERGVDPAL
Ga0318502_103248012	3300031747	Soil	MIDRSARPASPAASRHWVKSKNQSEVEVTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALYYLFEKRRQEQQSGQ
Ga0318546_109411671	3300031771	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWITSPNGPLWNNIDERGVDPALNYLFEKRRQE
Ga0318547_103338622	3300031781	Soil	VTNDRPWRLADLTFVPAEAGRERATLEGVEVVRENGRYWIITANGPLWSNIDERGVDPALNYLFGKRQQEQSSR
Ga0318497_100691002	3300031805	Soil	VTNDCPWRLADLSFVPSGNGRERAKINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNY
Ga0318511_106054551	3300031845	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWITSPNGPLWNNIDERGVDPALNYLFEKRALSAQPR
Ga0306919_106283782	3300031879	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQEQQSG
Ga0306925_101068295	3300031890	Soil	VTNDRPWRLADLTFVPSGSGRGRATINGVRVVRQNGRYWIMTRNGPQWSNIDEQAVDPALNYLFGERERWR
Ga0306925_102088992	3300031890	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWITSPNGPLWNNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0306921_108843481	3300031912	Soil	DRPWRLADLSFVPSGNGREKATINGVEVVKENGRYWIITPNGPLWSNIDERGVDPALNYLFEKRRQERQS
Ga0310912_109644132	3300031941	Soil	VAVTNDRPWRLEDLTFVPSGDGRERATINGVEVVRRNKRYWISSPVRQYSDIAEKDVNAALNYLFGERERWR
Ga0310913_103586182	3300031945	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALYYLFEKRRQEQQSGQ
Ga0310909_105913531	3300031947	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWITSPNGPLWNNIDERGVDPALNYLFEK
Ga0310909_113826691	3300031947	Soil	VAVTNDRPWRLADLTFVPSGGGRERVTINGVLVVRQNGRYWIMTRNGPQWNIDEQAVDPALNYLFGERERWR
Ga0318558_101771291	3300032044	Soil	VTNDCPWRLADVSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNY
Ga0318506_103154041	3300032052	Soil	VTNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWITSPNGPLWNNIDERGVDPALNY
Ga0318533_102271722	3300032059	Soil	VTNDCPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVEPALNYLFEKRRQEQQSGQ
Ga0306924_117780451	3300032076	Soil	REVAVTNDRPWRLADLTFVPSGSGRGRATINGVRVVRQNGRYWIMTRNGPQWSNIDEQAVDPALNYLFGERERWR
Ga0306920_1002741347	3300032261	Soil	TNDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWITSPNGPLWNNIDERGVDPALNYLFEKRRQEQQSGQ
Ga0306920_1027163181	3300032261	Soil	VTTDRPWRLADLSFVPSGNGRERATINGVEVVRENGRYWIITPNGPLWSNIDERGVDPALNYLF
Ga0306920_1040969171	3300032261	Soil	LGEREVAVTNDRPWRLEDLTFVPSGDGRERATINGVEVVRRNKRYWISSPVRQYSDIAEKDVNAALNYLFGERERWR
Ga0310914_113443711	3300033289	Soil	MAVTNDRPWRLADLTFVPLGDGRERATINGEVEIVRQNGRYWIMTPNGPQWHDIGKEGVNPALNFLFIERER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094273

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences