Metagenome Family F094359

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094359
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	78 residues
Representative Sequence	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP
Number of Associated Samples	87
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.86 %
% of genes near scaffold ends (potentially truncated)	34.91 %
% of genes from short scaffolds (< 2000 bps)	68.87 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.849 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.868 % of family members)
Environment Ontology (ENVO)	Unclassified (45.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (77.358 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.82% β-sheet: 7.27% Coil/Unstructured: 40.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00561	Abhydrolase_1	14.15
PF00903	Glyoxalase	4.72
PF12681	Glyoxalase_2	4.72
PF12697	Abhydrolase_6	4.72
PF12867	DinB_2	4.72
PF01963	TraB_PrgY_gumN	2.83
PF03932	CutC	2.83
PF12704	MacB_PCD	1.89
PF08241	Methyltransf_11	1.89
PF12847	Methyltransf_18	0.94
PF03551	PadR	0.94
PF12971	NAGLU_N	0.94
PF06983	3-dmu-9_3-mt	0.94
PF01073	3Beta_HSD	0.94
PF02633	Creatininase	0.94
PF05199	GMC_oxred_C	0.94
PF13414	TPR_11	0.94
PF09601	DUF2459	0.94
PF01053	Cys_Met_Meta_PP	0.94
PF02518	HATPase_c	0.94
PF06037	DUF922	0.94
PF13924	Lipocalin_5	0.94
PF00710	Asparaginase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1916	Pheromone shutdown protein TraB, contains GTxH motif (function unknown)	Function unknown [S]	2.83
COG3142	Copper homeostasis protein CutC	Inorganic ion transport and metabolism [P]	2.83
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.89
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.94
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.94
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.94
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.94
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.94
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.94
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.94
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.94
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.94
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.94
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.94
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.94
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.94
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.94
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.94
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.94
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.94
COG5661	Predicted secreted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG5664	Predicted secreted Zn-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.94

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.85 %
Unclassified	root	N/A	14.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.85 %
Unclassified	root	N/A	14.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.85 %
Unclassified	root	N/A	14.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.64 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.15 %
Unclassified	root	N/A	14.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	21.70 %
Unclassified	root	N/A	14.15 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	13.21 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.70 %
Unclassified	root	N/A	14.15 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	7.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.83 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.70 %
Unclassified	root	N/A	14.15 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	7.55 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.70 %
Unclassified	root	N/A	14.15 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6.60 %
Tistrella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella	2.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.70 %
Unclassified	root	N/A	14.15 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	6.60 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	2.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21.70 %
Unclassified	root	N/A	14.15 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6.60 %
Tistrella mobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	2.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_10128452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300000559\|F14TC_108328003	Not Available	512	Open in IMG/M
3300000956\|JGI10216J12902_106437940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300003324\|soilH2_10031803	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6745	Open in IMG/M
3300004156\|Ga0062589_100531926	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300004479\|Ga0062595_100005635	All Organisms → cellular organisms → Bacteria	3622	Open in IMG/M
3300004480\|Ga0062592_102308402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	538	Open in IMG/M
3300005329\|Ga0070683_100023900	All Organisms → cellular organisms → Bacteria	5471	Open in IMG/M
3300005331\|Ga0070670_100767531	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300005336\|Ga0070680_101198733	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005339\|Ga0070660_100958714	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005339\|Ga0070660_101713214	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005344\|Ga0070661_101386562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300005347\|Ga0070668_102229986	Not Available	506	Open in IMG/M
3300005355\|Ga0070671_100125791	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300005355\|Ga0070671_102096501	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005356\|Ga0070674_100393379	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300005356\|Ga0070674_101619291	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005365\|Ga0070688_100099113	Not Available	1918	Open in IMG/M
3300005366\|Ga0070659_100013260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6130	Open in IMG/M
3300005437\|Ga0070710_10707712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	711	Open in IMG/M
3300005439\|Ga0070711_100061631	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300005455\|Ga0070663_100461624	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005456\|Ga0070678_101789203	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005459\|Ga0068867_100063842	All Organisms → cellular organisms → Bacteria	2737	Open in IMG/M
3300005507\|Ga0074259_11354206	Not Available	503	Open in IMG/M
3300005545\|Ga0070695_101229634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300005564\|Ga0070664_101578204	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005578\|Ga0068854_101078199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	715	Open in IMG/M
3300005764\|Ga0066903_102360310	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005764\|Ga0066903_104870495	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005840\|Ga0068870_11405078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	511	Open in IMG/M
3300006049\|Ga0075417_10664622	Not Available	533	Open in IMG/M
3300006169\|Ga0082029_1604754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2445	Open in IMG/M
3300006196\|Ga0075422_10134308	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300006844\|Ga0075428_100107160	All Organisms → cellular organisms → Bacteria	3046	Open in IMG/M
3300006845\|Ga0075421_100008912	All Organisms → cellular organisms → Bacteria	12360	Open in IMG/M
3300006845\|Ga0075421_100540307	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300006845\|Ga0075421_101993493	Not Available	619	Open in IMG/M
3300006846\|Ga0075430_100113567	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300006852\|Ga0075433_10094215	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300006880\|Ga0075429_100066522	All Organisms → cellular organisms → Bacteria	3138	Open in IMG/M
3300006880\|Ga0075429_101538683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Tistrella → Tistrella mobilis	578	Open in IMG/M
3300009094\|Ga0111539_10411250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1576	Open in IMG/M
3300009098\|Ga0105245_10117124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2485	Open in IMG/M
3300009100\|Ga0075418_11310501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300009147\|Ga0114129_10005549	All Organisms → cellular organisms → Bacteria	17842	Open in IMG/M
3300009147\|Ga0114129_10221112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2554	Open in IMG/M
3300009147\|Ga0114129_10989011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1060	Open in IMG/M
3300009156\|Ga0111538_10086970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3975	Open in IMG/M
3300009162\|Ga0075423_10201565	All Organisms → cellular organisms → Bacteria	2087	Open in IMG/M
3300009176\|Ga0105242_10049274	All Organisms → cellular organisms → Bacteria	3427	Open in IMG/M
3300009176\|Ga0105242_10926691	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300009177\|Ga0105248_10143691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2692	Open in IMG/M
3300009177\|Ga0105248_10344936	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1677	Open in IMG/M
3300012514\|Ga0157330_1016446	Not Available	796	Open in IMG/M
3300012958\|Ga0164299_11497397	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012985\|Ga0164308_10998104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012986\|Ga0164304_10173641	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300012987\|Ga0164307_11615840	Not Available	549	Open in IMG/M
3300013297\|Ga0157378_10463217	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300013297\|Ga0157378_11783439	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300013306\|Ga0163162_10080910	All Organisms → cellular organisms → Bacteria	3318	Open in IMG/M
3300014326\|Ga0157380_10820240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	949	Open in IMG/M
3300015262\|Ga0182007_10098623	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300015371\|Ga0132258_10037637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	10929	Open in IMG/M
3300015371\|Ga0132258_10195535	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4902	Open in IMG/M
3300015372\|Ga0132256_100008904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8657	Open in IMG/M
3300015372\|Ga0132256_100047551	All Organisms → cellular organisms → Bacteria	3971	Open in IMG/M
3300015372\|Ga0132256_103546155	Not Available	525	Open in IMG/M
3300015373\|Ga0132257_102042568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	740	Open in IMG/M
3300017792\|Ga0163161_10553448	Not Available	943	Open in IMG/M
3300019356\|Ga0173481_10614708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300025315\|Ga0207697_10010831	All Organisms → cellular organisms → Bacteria	3879	Open in IMG/M
3300025899\|Ga0207642_10223650	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300025903\|Ga0207680_10286951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300025912\|Ga0207707_10899887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300025918\|Ga0207662_10006239	All Organisms → cellular organisms → Bacteria	6418	Open in IMG/M
3300025925\|Ga0207650_10492178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300025932\|Ga0207690_10561789	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300025934\|Ga0207686_10866524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300025936\|Ga0207670_10298267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300025937\|Ga0207669_10273511	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300025940\|Ga0207691_11248340	Not Available	615	Open in IMG/M
3300026035\|Ga0207703_11624756	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300026067\|Ga0207678_10233812	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300026078\|Ga0207702_11788380	Not Available	607	Open in IMG/M
3300026089\|Ga0207648_10015214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7078	Open in IMG/M
3300026089\|Ga0207648_10538781	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300026089\|Ga0207648_10885261	Not Available	833	Open in IMG/M
3300026116\|Ga0207674_10149356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2294	Open in IMG/M
3300026121\|Ga0207683_10751619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	905	Open in IMG/M
3300026142\|Ga0207698_12027982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300027907\|Ga0207428_10540409	Not Available	843	Open in IMG/M
3300027909\|Ga0209382_10022134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7701	Open in IMG/M
3300027909\|Ga0209382_11342115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300028587\|Ga0247828_10505325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300031548\|Ga0307408_100029400	All Organisms → cellular organisms → Bacteria	3807	Open in IMG/M
3300031740\|Ga0307468_101449339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300031901\|Ga0307406_10111907	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300031938\|Ga0308175_100030796	All Organisms → cellular organisms → Bacteria → Acidobacteria	4431	Open in IMG/M
3300031938\|Ga0308175_100321015	All Organisms → cellular organisms → Bacteria → FCB group	1588	Open in IMG/M
3300031944\|Ga0310884_10912943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300032000\|Ga0310903_10666150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300032180\|Ga0307471_101181218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	69.81%
Environmental	Environmental	30.19%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	69.81%
Terrestrial	Environmental → Terrestrial	30.19%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	50.00%
Soil	Environmental → Terrestrial → Soil	30.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	30.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.21%
Loam	Environmental → Terrestrial → Soil → Loam	11.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	30.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.94%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0752.00001060	2162886012	Miscanthus Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
F14TC_1083280031	3300000559	Soil	MSQRTANLGPGLRVLLGVIGGPALGSGVVVAATELSAASRGSPLLPTLLASVVAGLAVLGGVLLIRGAVLGRI
JGI10216J12902_1064379402	3300000956	Soil	VLLGIVGTAAVGSGVVVTATELRSAYLGSPLVPTLLASLVAGLAALGGGLILRGAIRGRIAVRDPRGRT*
soilH2_100318032	3300003324	Sugarcane Root And Bulk Soil	MMERVLGPGLRGLFGIVGVAALIAGIVVAATEVRLLFVGSPPIPTLLAAIVAGVAALGGGLVLRGAVRGRVAVRSPRGRRN
Ga0062589_1005319262	3300004156	Soil	MAERVLPSGLRVLVGLIGAAALGAGFVVAATELRYAYLGSPLLPTLLASVVASVVALGGAVLLRGAVRGRIAVRSPRRHRR*
Ga0062595_1000056352	3300004479	Soil	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0062592_1023084021	3300004480	Soil	VAERVLPSGLRVLVGLIGAAALGAGFVVAATELRYAYLGSPLLPTLLASVVASVVALGGAVLLRGAVRGRIAVRSPRRHRS*
Ga0070683_1000239007	3300005329	Corn Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070670_1007675311	3300005331	Switchgrass Rhizosphere	LGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070680_1011987332	3300005336	Corn Rhizosphere	LSDEPHPPVPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP*
Ga0070660_1009587142	3300005339	Corn Rhizosphere	VPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP*
Ga0070660_1017132142	3300005339	Corn Rhizosphere	VPQRITSLGLGLRVLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR*
Ga0070661_1013865621	3300005344	Corn Rhizosphere	ARSSNADCFRLSDEPHPPVPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP*
Ga0070668_1022299861	3300005347	Switchgrass Rhizosphere	VVERDLGSGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLIASLVAGLAALGGALLIRGAFRGRIAVRSPRRGRRQADGR*
Ga0070671_1001257914	3300005355	Switchgrass Rhizosphere	MPQRITSLGPGLRALLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLASGVAGLVTLGGVLLLRGAIRGRIAVRD
Ga0070671_1020965012	3300005355	Switchgrass Rhizosphere	VPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGR
Ga0070674_1003933793	3300005356	Miscanthus Rhizosphere	VPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0070674_1016192912	3300005356	Miscanthus Rhizosphere	MPQRITSLGPGLRVLLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRIAVRDPRGRR*
Ga0070688_1000991134	3300005365	Switchgrass Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRV
Ga0070659_1000132601	3300005366	Corn Rhizosphere	LGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070710_107077122	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPQRTVDLGPGLRIVLAMIGVAALVSGIVVAATGLRSAHLGSPLVPTLLAALVAGLAAVGGGLLLRGAILGRIAVRDPRGRT*
Ga0070711_1000616313	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPQRTVDLGPGLRIVLAIIGVAALVSGIVVAATGLRSAHLGSPLVPTLLAALVAGLAAVGGGLLLRGAILGRIAVRDPRGRT*
Ga0070663_1004616241	3300005455	Corn Rhizosphere	RVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070678_1017892031	3300005456	Miscanthus Rhizosphere	VVERDLGFGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLVASLVAGLAALGGALLIRGAFRGRIAVRSPRR
Ga0068867_1000638424	3300005459	Miscanthus Rhizosphere	VPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0074259_113542061	3300005507	Arabidopsis Rhizosphere	RTANLGPGLRVLLGIIGTAALGSGVVVTATELRSAYGGAPLVPTVLAALVAGLAALGGGLILRGAIRGRIAVRDPRGRR*
Ga0070695_1012296342	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVGGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0070664_1015782041	3300005564	Corn Rhizosphere	GIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0068854_1010781992	3300005578	Corn Rhizosphere	SGVVVAATQIRSGSLSSAPLRTSLVVLVAGLAAVGGGLLLRGAIRGRIPVRDPRGRR*
Ga0066903_1023603102	3300005764	Tropical Forest Soil	MPPRATSLGPGLRVLLAIIGMAALGSGIIVAATELRYAHRGSPLVPTLLATGVAGLAAVGGVLLLRGAIRGRIPVRDPRGRT*
Ga0066903_1048704952	3300005764	Tropical Forest Soil	VPQRITSLGPGLRVLLAVIGTVALGSGIVVAATELRSAYLGSPLLPTLLASAVAGFAAVGGVLLLRGAIRGRIAVRDPTGRT*
Ga0068870_114050781	3300005840	Miscanthus Rhizosphere	SRVVERDLGSGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPLVPTLAASLVASLAALGGALLIRGAFRGRIAVRSPRRGRRQADER*
Ga0075417_106646221	3300006049	Populus Rhizosphere	VLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGLAVLGGVLLIRGAVLG
Ga0082029_16047541	3300006169	Termite Nest	MERPLSRGLRVLLAIVGAAALGSGLVVGATELRLAYLGSPVVPTLFVVVVAGLAAIGGSLLIRGAVRGRIAVRT
Ga0075422_101343082	3300006196	Populus Rhizosphere	VLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVASLAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0075428_1001071604	3300006844	Populus Rhizosphere	MSQRTANLGPGLRVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR*
Ga0075421_1000089123	3300006845	Populus Rhizosphere	MRERVLGSGLRVLIGVVGAAALGAGLIVGATELRYVYLGSPAVPAVLASLFAGVVALGGGVLLRGAIRGRIAVRSPRRDRA*
Ga0075421_1005403072	3300006845	Populus Rhizosphere	VLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR*
Ga0075421_1019934932	3300006845	Populus Rhizosphere	MPLRTANLGPGLRVLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAAFAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0075430_1001135673	3300006846	Populus Rhizosphere	LIGVVGAAALGAGLIVGATELRYVYLGSPAVPAVLASLFAGVVALGGGVLLRGAIRGRIAVRSPRRDRA*
Ga0075433_100942152	3300006852	Populus Rhizosphere	VADRSLGPGLRLLIGIVGLSAIGAGLLVCVTELRLAYGGSPRVPTLIAAIVAGLAAVGGGLIVRGAIRGRIAVRDPRGKRHPTDSTTPRT*
Ga0075429_1000665223	3300006880	Populus Rhizosphere	MSQRTANLGPGLRVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGLAVLGGVLLIRGAVLGRIAVRDPRGRR*
Ga0075429_1015386831	3300006880	Populus Rhizosphere	MRERVLGSGLRVLVGVVGAAALGAGLIVGATELRYVYLGSPAVPAVLASLFAGVVALGGGVLLRGAIRGRIAVRSPRRDRA*
Ga0111539_104112502	3300009094	Populus Rhizosphere	VLLGIIGTAALGSGAVVTATELRSAYRGSPLVPTLLASLVAGLAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0105245_101171241	3300009098	Miscanthus Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGFVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0075418_113105012	3300009100	Populus Rhizosphere	MPQHIANLGPGLRVLLGVIGTAALGSGAVVTATELRSAYRGSPLVPTLLASLVAGLAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0114129_1000554914	3300009147	Populus Rhizosphere	VADRSLGPGLRLLIGIVGLSAIGAGLLVCVTELRLAYLGSPRIPTLIAAMVAGMAAVGGGLIVRGAIRGRIAVRDPRGKRHPTDSTTPRT*
Ga0114129_102211122	3300009147	Populus Rhizosphere	VLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0114129_109890112	3300009147	Populus Rhizosphere	VLVGLIGAAALGAGLVVGATELRYAYLGLPLLPTLLASVVAAVVALGGGVLLRGAARGRITVRSPRRDRG*
Ga0111538_100869702	3300009156	Populus Rhizosphere	VLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAAFAALGGGLILRGAIRGRIAVRDPRGRK*
Ga0075423_102015651	3300009162	Populus Rhizosphere	VLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPR
Ga0105242_100492743	3300009176	Miscanthus Rhizosphere	VPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0105242_109266912	3300009176	Miscanthus Rhizosphere	VLLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRIAVRDPRGRR*
Ga0105248_101436911	3300009177	Switchgrass Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRITVRDPRGHRWDENA*
Ga0105248_103449364	3300009177	Switchgrass Rhizosphere	VLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR*
Ga0157330_10164462	3300012514	Soil	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGPRWDENA*
Ga0164299_114973972	3300012958	Soil	VPQRITSLGPGLRVLLAVIGTAALGSGIIVAATELRYAYGGSPLVPTLLASGAAGLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0164302_104506602	3300012961	Soil	LLIGLIGAAALGAGLLVAATELRSAYHGSPPLPTVLAALVAGVVALGGGVLLRGAFRGRIAVRSPPGGGGHPHAH*
Ga0164308_109981042	3300012985	Soil	VLLGIIGTAALGSGVVVSATELRSAYLGARLVPTLLASLVAGLAALGGGLILRGVIRGRIAVRDPRGRR*
Ga0164304_101736412	3300012986	Soil	VPQRITSLGPGLRVLLAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGAAGLAALGGVLLLRGAIRGRIAVRDPRGRT*
Ga0164307_116158402	3300012987	Soil	VPQRITSLGPGLRVLLAVIGTAALGSGIIVAATELRYAYGGSPLVPTLLASGAAGLAALGGVLLLRGAIRGRIAVRDPRGRT*
Ga0157378_104632172	3300013297	Miscanthus Rhizosphere	VPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP*
Ga0157378_117834391	3300013297	Miscanthus Rhizosphere	MPQRITSLGPGLRVLLAIIGLAALASGIVVAATELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRI
Ga0163162_100809105	3300013306	Switchgrass Rhizosphere	MSQRTAYLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0157380_108202401	3300014326	Switchgrass Rhizosphere	VVERDLGSGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLIASLVAGLAALGGALLIRGASRGRIAVRSPRRGRRQADGR*
Ga0182007_100986232	3300015262	Rhizosphere	VLIAIIGTAALGSGIVIAVTQIRSPYLGSAPVRTSLVLLVAGLAAFGGGLLVRGAIRGRILVRDPRGRT*
Ga0132258_1003763710	3300015371	Arabidopsis Rhizosphere	VLLGIIGTAALGSGVVVTATELRSAYGGAPLVPTVLAALVAGLAALGGGLILRGAIRGRIAVRDPRGRR*
Ga0132258_101955357	3300015371	Arabidopsis Rhizosphere	VLLAVIGVAALGSGVVVVATELGAASRGSPLLPTLLASIVAGLAALGGVLLIRGAVRGRIAVRDPRGRR*
Ga0132256_1000089042	3300015372	Arabidopsis Rhizosphere	MSPRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA*
Ga0132256_1000475514	3300015372	Arabidopsis Rhizosphere	VLIGVVGSAALGAGLIVGATELRDAYVGSAAVPTILASLVAGVVALGGAVLLRGAWRGRISVRSPRHDRR*
Ga0132256_1035461551	3300015372	Arabidopsis Rhizosphere	VLLGVIGTAALGSGIIVAAMELRAASHGSPLAPTLLASIVAGLAALGGVLLIRGAVRGR
Ga0132257_1020425683	3300015373	Arabidopsis Rhizosphere	MSQRTAILGPGLRVLLGVIGTAALGSGIIVAAMELRAASHGSPLAPTLLASIVAGLAALGGVLLIRGAV
Ga0163161_105534481	3300017792	Switchgrass Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRD
Ga0173481_106147081	3300019356	Soil	NLGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207697_100108316	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207642_102236502	3300025899	Miscanthus Rhizosphere	VPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207680_102869513	3300025903	Switchgrass Rhizosphere	LGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207707_108998872	3300025912	Corn Rhizosphere	VPQRITSLGPGLRILLAIIGTAAVGSGIVVAATELRWAYLGSPVVPTLLASLVAGLAAVGGGLLIRGAIRGRIAVRDPRGRP
Ga0207662_100062397	3300025918	Switchgrass Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRITVRDPRGHRWDEN
Ga0207650_104921781	3300025925	Switchgrass Rhizosphere	LGPGLRVLLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207690_105617893	3300025932	Corn Rhizosphere	VLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR
Ga0207686_108665242	3300025934	Miscanthus Rhizosphere	VPQRITSIGPGLRVILAVIGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207670_102982672	3300025936	Switchgrass Rhizosphere	AALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207669_102735111	3300025937	Miscanthus Rhizosphere	MPQRITSLGPGLRVLLAIIGLAALASGIVVATTELRYAYLGSPLMPTLLVSGVAGLVTLGGVLLLRGAIRGRIAVRDPRGRR
Ga0207691_112483401	3300025940	Miscanthus Rhizosphere	VPQRITSLGLGLRVLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRGRIPVRDPRGRR
Ga0207703_116247563	3300026035	Switchgrass Rhizosphere	VLLAIIGAAALGSGVVVAATEIRYAYLGSPLVPTLLASGVAGLVTLGGVLLLRGAIRG
Ga0207678_102338121	3300026067	Corn Rhizosphere	LLGIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207702_117883802	3300026078	Corn Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELRYAYRGSPLVPTLFASGVAGLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207648_100152145	3300026089	Miscanthus Rhizosphere	VPQRITSLGPGLRVLLALTGTAALGSGIVVAATELRYAYGGSPLVPTLLASGVASLAALGGVLLLRGAIRGRIAVRDPRGRP
Ga0207648_105387814	3300026089	Miscanthus Rhizosphere	LGSGLRVLLGVVGAVALGAGLVVAGIELRYAYLGSPLVPTLAASLVASLAALGGALLIRGALRGRIAVRSPRRGRRAADGR
Ga0207648_108852611	3300026089	Miscanthus Rhizosphere	MSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRV
Ga0207674_101493564	3300026116	Corn Rhizosphere	GIIGTAALGSGIVVAATELRSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0207683_107516192	3300026121	Miscanthus Rhizosphere	VVERDLGFGLRVLLGVVGAAALGAGLVVAGIELRYAYLGSPRVPTLIASLVAGLAALGGALLIRGASRGRIAVRSPRRGRRQADGR
Ga0207698_120279823	3300026142	Corn Rhizosphere	VLLAIIGAAALGSGVVVAATQIRSGSLSSAPLRTSLVVLVAGLAAVGGGLLLRGAIRGRIPVRDPRGRR
Ga0207428_105404091	3300027907	Populus Rhizosphere	MSQRTANLGPGLRVLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR
Ga0209382_100221347	3300027909	Populus Rhizosphere	VLLGVIGVAALGSGVVVAATELSAASRGSPLLPTLLASVVAGVAVLGGVLLIRGAVLGRIAVRDPRGRR
Ga0209382_113421151	3300027909	Populus Rhizosphere	MPLRTANLGPGLRVLLGIIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAAFAALGGGLILRGAIRGRIAVRDPRGRK
Ga0247828_105053251	3300028587	Soil	ASMSQRTANLGPGLRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0307408_1000294005	3300031548	Rhizosphere	MPQHIANLGPGLRVLLGVIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAGFAALGGGLILRGAIRGRIAVRDPRGRR
Ga0307468_1014493392	3300031740	Hardwood Forest Soil	MPLRTANLGPGLRVLLGIIGTAALGSGVVVTATELRSAYVGAPLVPTLLAALVAGLAALGGGLILRGAIRGRIAVRDPRGRT
Ga0307406_101119073	3300031901	Rhizosphere	MPQHIANLGPGLRVLLGVIGTAALGSGAVVTATELRSAYLGSPLVPTLLASLVAGFAALGGGLILRGAIRGQIAV
Ga0308175_1000307961	3300031938	Soil	MPLRTTNLGPVLRVLLGVIGTAALGSGVVVTATELRLAYLGSPLLPTLLAALVAGLAALGGGLVLRGAIQGRIAVRDPRGRT
Ga0308175_1003210152	3300031938	Soil	MNEERVLGIGLRVLLAVIGIAALGAGLVVAATELRSAHLGSPPLPTMLASVVALVAAFGGALLIRGALRGRIAVRPIRRDR
Ga0310884_109129431	3300031944	Soil	LRVLLGIIGTAALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0310903_106661502	3300032000	Soil	ALGSGIVVAATELHSAYLGSPLLPTLLASLVAGIAALGGALILRGAVRGRVTVRDPRGHRWDENA
Ga0307471_1011812182	3300032180	Hardwood Forest Soil	SSTFESSIEMPLRTANLGPGLRVLLGIIGTAALGSGVVVTATELRSAYVGAPLVPTLLAALVAGLAALGGGLILRGAIRGRIAVRDPRGGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094359

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences