Metagenome / Metatranscriptome Family F094429

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094429
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	121 residues
Representative Sequence	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR
Number of Associated Samples	82
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.77 %
% of genes near scaffold ends (potentially truncated)	36.79 %
% of genes from short scaffolds (< 2000 bps)	86.79 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.132 % of family members)
Environment Ontology (ENVO)	Unclassified (32.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 2.01% β-sheet: 41.61% Coil/Unstructured: 56.38%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF03741	TerC	6.60
PF07077	DUF1345	3.77
PF02515	CoA_transf_3	2.83
PF13409	GST_N_2	1.89
PF03631	Virul_fac_BrkB	1.89
PF00072	Response_reg	0.94
PF00496	SBP_bac_5	0.94
PF04357	TamB	0.94
PF13610	DDE_Tnp_IS240	0.94
PF13701	DDE_Tnp_1_4	0.94
PF02826	2-Hacid_dh_C	0.94
PF00672	HAMP	0.94
PF01027	Bax1-I	0.94
PF13416	SBP_bac_8	0.94
PF01757	Acyl_transf_3	0.94
PF02796	HTH_7	0.94
PF12969	DUF3857	0.94
PF03682	UPF0158	0.94
PF02308	MgtC	0.94
PF07519	Tannase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	6.60
COG4291	Uncharacterized membrane protein	Function unknown [S]	3.77
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.83
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.89
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.94
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.28 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	69.81 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	10.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.81 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	3.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.81 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	3.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	69.81 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	2.83 %
Azospirillum baldaniorum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10088952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1279	Open in IMG/M
3300002245\|JGIcombinedJ26739_100239297	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300005175\|Ga0066673_10759164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	556	Open in IMG/M
3300005177\|Ga0066690_10445170	All Organisms → cellular organisms → Bacteria → Proteobacteria	877	Open in IMG/M
3300005178\|Ga0066688_10206689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1248	Open in IMG/M
3300005179\|Ga0066684_10295189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1075	Open in IMG/M
3300005434\|Ga0070709_10092804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1994	Open in IMG/M
3300005434\|Ga0070709_11200512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300005435\|Ga0070714_100069680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3038	Open in IMG/M
3300005436\|Ga0070713_100130607	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300005436\|Ga0070713_100665195	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300005437\|Ga0070710_10114914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1622	Open in IMG/M
3300005437\|Ga0070710_10395027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300005439\|Ga0070711_100119106	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300005439\|Ga0070711_101969558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	514	Open in IMG/M
3300005471\|Ga0070698_100083400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3185	Open in IMG/M
3300005546\|Ga0070696_100756436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum baldaniorum	797	Open in IMG/M
3300005559\|Ga0066700_10661331	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300005575\|Ga0066702_10268938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300005575\|Ga0066702_10711968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	598	Open in IMG/M
3300005983\|Ga0081540_1059350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1837	Open in IMG/M
3300006028\|Ga0070717_10845942	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300006032\|Ga0066696_10418950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300006032\|Ga0066696_10503810	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300006163\|Ga0070715_11081841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300006173\|Ga0070716_101211722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300006173\|Ga0070716_101212055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300006175\|Ga0070712_100018042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4577	Open in IMG/M
3300006175\|Ga0070712_100179315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1649	Open in IMG/M
3300006175\|Ga0070712_100515823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
3300006176\|Ga0070765_100761836	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300006804\|Ga0079221_11267776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	577	Open in IMG/M
3300006806\|Ga0079220_10608066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300006871\|Ga0075434_102232964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300007788\|Ga0099795_10080920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1243	Open in IMG/M
3300009137\|Ga0066709_100493440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1723	Open in IMG/M
3300009143\|Ga0099792_10123427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1394	Open in IMG/M
3300010046\|Ga0126384_11175179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300010047\|Ga0126382_10661048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300010154\|Ga0127503_10172079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300010362\|Ga0126377_10859801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300010398\|Ga0126383_11842487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300010401\|Ga0134121_12123789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300012212\|Ga0150985_116394678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300012362\|Ga0137361_11351166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300012948\|Ga0126375_11183972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300012951\|Ga0164300_10627854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300012957\|Ga0164303_10413482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300012957\|Ga0164303_10756250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300012961\|Ga0164302_10808578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300012985\|Ga0164308_10828183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300018433\|Ga0066667_11843587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300018468\|Ga0066662_11147177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300020579\|Ga0210407_10085572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2381	Open in IMG/M
3300020579\|Ga0210407_10265760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1337	Open in IMG/M
3300020579\|Ga0210407_10900869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300020580\|Ga0210403_10030484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4309	Open in IMG/M
3300020580\|Ga0210403_10084600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2560	Open in IMG/M
3300020580\|Ga0210403_10535902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	949	Open in IMG/M
3300020580\|Ga0210403_11441305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300020581\|Ga0210399_10677574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300020582\|Ga0210395_11439855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300020583\|Ga0210401_10080089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3074	Open in IMG/M
3300020583\|Ga0210401_10181189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1962	Open in IMG/M
3300021168\|Ga0210406_11106874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300021171\|Ga0210405_10749343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300021171\|Ga0210405_11147618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300021171\|Ga0210405_11345430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300021171\|Ga0210405_11433092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300021178\|Ga0210408_10286402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1313	Open in IMG/M
3300021178\|Ga0210408_11282653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300021180\|Ga0210396_10162019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2006	Open in IMG/M
3300021374\|Ga0213881_10142643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1047	Open in IMG/M
3300021401\|Ga0210393_11564198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300021402\|Ga0210385_10430036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300021403\|Ga0210397_10659186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300021420\|Ga0210394_11311681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300021432\|Ga0210384_10868325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300021432\|Ga0210384_11110171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300021433\|Ga0210391_11167832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300021475\|Ga0210392_11464520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300021479\|Ga0210410_10105604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2489	Open in IMG/M
3300022512\|Ga0242676_1032410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300022533\|Ga0242662_10178241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300022720\|Ga0242672_1108230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300025320\|Ga0209171_10600515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300025906\|Ga0207699_11106845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300025915\|Ga0207693_10048816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3324	Open in IMG/M
3300025915\|Ga0207693_10056293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3083	Open in IMG/M
3300025929\|Ga0207664_10082312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2621	Open in IMG/M
3300025939\|Ga0207665_10146411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1688	Open in IMG/M
3300026490\|Ga0257153_1104986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300027174\|Ga0207948_1043343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300027605\|Ga0209329_1055630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300027903\|Ga0209488_10655054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300028047\|Ga0209526_10073555	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300028047\|Ga0209526_10306882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300029636\|Ga0222749_10641930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031092\|Ga0308204_10090088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300031753\|Ga0307477_10452888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300031754\|Ga0307475_10262396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1385	Open in IMG/M
3300031754\|Ga0307475_11378668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031820\|Ga0307473_10815232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031823\|Ga0307478_11585079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300032180\|Ga0307471_100818618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1098	Open in IMG/M
3300032205\|Ga0307472_101216751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.17%
Host-Associated	Host-Associated	2.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.28%
Plants	Host-Associated → Plants	2.83%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.94%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.09%
Loam	Environmental → Terrestrial → Soil → Loam	29.25%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.94%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	19.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_100889522	3300001867	Forest Soil	WRSSCRLPIRIGGVLIAAAAFGQALAQPDDVNAIIPGGPGVLTKCRGWVVTSSCRTYHHISLPSQIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGDRHRMDKINVAPCYRADEGR*
JGIcombinedJ26739_1002392973	3300002245	Forest Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0066673_107591641	3300005175	Soil	LISSGNLGPAAADQPDTVKAVTPEALGVLTKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKINVPRCYRADEGH*
Ga0066690_104451701	3300005177	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKGDRCTIFSEATGERHRRDKIDITPCYPAGPAS*
Ga0066688_102066891	3300005178	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPLRIAVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATAERHRRDKIDITPCYPAGPAS*
Ga0066684_102951892	3300005179	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPLRIAVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATGERHRRDKISITPCYPAEPAS*
Ga0070709_100928043	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDNVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGNRHRMDKINVAPCYPAEEGR*
Ga0070709_112005122	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RRRLMPLRVRIDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR*
Ga0070714_1000696805	3300005435	Agricultural Soil	MPLRVRIAGLLIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR*
Ga0070713_1001306073	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGAGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDEHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070713_1006651952	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIVVGDTITISFGSHPKEFGFSIARIELKGQHCAIFSKAEGDRNRMDKINITPCYRADEGR*
Ga0070710_101149143	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIARLLIAAGSFGAVAADQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR*
Ga0070710_103950272	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGAGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGGHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070711_1001191063	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070711_1019695581	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPAAANQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR*
Ga0070698_1000834003	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVLIAGLVIAAGGFGPAAADQPDTVNAVTPGGLGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTIAISFGSHPKEYGFSVVRIALKDDHCTIFSDADEDRQKMDKINVAPCSRADEGR*
Ga0070696_1007564361	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRIRIAGILIAAGAFGPAAAARPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKPDGNRHRMDKINVAPCYRADEGR*
Ga0066700_106613311	3300005559	Soil	VVELHRGFLVRLKGCDGGGRFTTWDADRRRLMLSRAWIAGLLLAASIVGPTTARESDNVEAVEPGGPGVLTKCRNWLVASSCNTYQHISLPPRIAVGDTIPVSFGSHPKEFRFFVARIALKGDHCAIFSEAHGDRHQMDKINVAPCRRAEAGR*
Ga0066702_102689382	3300005575	Soil	MPRFRIRIVGFLIAVSSLRAVAADRPDDAKVVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGQHCAIFSKANGDRHRMDNINIAPCYRAEEGR*
Ga0066702_107119681	3300005575	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKGDRCTIFSEATREKRHRRDKIDITPCYPAGPVS*
Ga0081540_10593502	3300005983	Tabebuia Heterophylla Rhizosphere	MSCCTPIVASRWPGQCRLSIRIGGILIATGAFGPAVAQSDNINAIIPGGPGVLTKCRGWVVTNTCRTYNHISLPSRIAVGDTITVSFGSHPKEVKFYVARIDLKRQHCALFSKAYGDRHRMDKINVAPCYWADKGR*
Ga0070717_108459422	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVLIAGLVIAAGGFGPAAADQPDTVNAVTPGGLGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTIAISFGSHPKEYGFSVVRIALKDDHCTIFSDA
Ga0066696_104189502	3300006032	Soil	MPRFHIRIVGFLIAVSSFGAVAADRPDDAKPVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGQHCAIFSKANGDRHRMDKINIAPCYRAGEER*
Ga0066696_105038102	3300006032	Soil	MPFRTWMAGLVIAAGTIDPAAGQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPLRIAVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATGERHRRDKIDITPCYPAGPAS*
Ga0070715_110818412	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAE
Ga0070716_1012117221	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR*
Ga0070716_1012120552	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0070712_1000180428	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR*
Ga0070712_1001793151	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGAGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR*
Ga0070712_1005158232	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIVAGDTITISFGSHPKEFGFSIARIELKGQHCAIFSKAEGDRNRMDKINITPCYRADEGR*
Ga0070765_1007618362	3300006176	Soil	RRPMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDRCTIVSDADEDRQKIDKINVAPCYRADEGR*
Ga0079221_112677761	3300006804	Agricultural Soil	YCTSIVASRWRSSCRLPIRIGGVLIAAAAFGQALAQPDDVNAIIPGGPGVLTKCRGWVVTSSCRTYHHISLPSQIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGDRHQMDKINVAPCYRADEDADAPQRFGVWR*
Ga0079220_106080662	3300006806	Agricultural Soil	MRLIPLRFWIAGLLISSGNLGPAAADQPDTVKAVTPEALGVLTKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDLYHTDKIKVPRCYRADEVH*
Ga0075434_1022329642	3300006871	Populus Rhizosphere	MAGLLIALGSFGPAAADEPDAVKAVTPEGPGVLTKCRGWLVTSTCRTYRQISLPSRIAVGDTITISFGSHPKEFRFPVARIDLKAQHCAIFSKADGDRHRMDKINVAPCYRAD*
Ga0099795_100809201	3300007788	Vadose Zone Soil	LIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCTIFSKAEGDHHLDRINVAPCYRADE
Ga0066709_1004934402	3300009137	Grasslands Soil	MPFRTWMAGLVIAAGTIDPAASQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKSDRCTIFSEATGERHRRDKIDITPCYPAGPAS*
Ga0099792_101234271	3300009143	Vadose Zone Soil	MRLIPLRFWIAGLLISSGNLGPAAADQPNTVKAVTPEALGVLSKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKIKVRRCYQADEVH*
Ga0126384_111751791	3300010046	Tropical Forest Soil	MLEGRDGGITFQSVASLARLMPLRMPIAGILIAAGAVGPAAFAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGNTFTVSFGSHPKEFRFYVARIDLKRLSGPVV*
Ga0126382_106610482	3300010047	Tropical Forest Soil	MTLPIGIAGILIAAGAVGPAAAAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRAGEGR*
Ga0127503_101720792	3300010154	Soil	MPPRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0126377_108598012	3300010362	Tropical Forest Soil	MTLPIGIAGILIAAGAVGPAAAAQADNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRAGEGR*
Ga0126383_118424872	3300010398	Tropical Forest Soil	WMLEGRDGGITFQSVASLARLMPLRMPIAGILIAAGAVGPAAFAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRAGEGR*
Ga0134121_121237891	3300010401	Terrestrial Soil	LLIAAGSFGSAAADQPDTVKAVTPGGPGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAKADRHRMDKINIAPCYRSDKGR*
Ga0150985_1163946781	3300012212	Avena Fatua Rhizosphere	MRLIPLRFWIAGLLISSGNLGPAAADQPDTVKAVTPEALGVLTKCRGWLVTRSCRTYHHIRLPSRIAVGDTITVLFGSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKIKVPRCYRADEVH*
Ga0137361_113511661	3300012362	Vadose Zone Soil	MPLRVRIAGLLIAAGNFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRPD
Ga0126375_111839721	3300012948	Tropical Forest Soil	AGILIAAGAVGPAAAAQPDNVNAIIPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVLFGSHPKEFRFYVARIDFKRQHCALFSKADGNRHRMDKINVAPCYRADEGR*
Ga0164300_106278541	3300012951	Soil	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDNVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCA
Ga0164303_104134822	3300012957	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCHRADEGR*
Ga0164303_107562501	3300012957	Soil	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDNVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGNRHRMDKINVAPC
Ga0164302_108085781	3300012961	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTSGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR*
Ga0164308_108281832	3300012985	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDEHCAIFSEAEGDRHRMDKINISPSYRADEGR*
Ga0066667_118435872	3300018433	Grasslands Soil	MPFRTWMAGLVIAAGTIDPAASQPDTVEAVEPAGLGVLTKCRGWLVASSCRTYHHIRLPSRIVVGDELPISFGSHPKEFKFFVARIALKGDRCTIFSEATGERHRRDKI
Ga0066662_111471771	3300018468	Grasslands Soil	MRLIPLRFWIAGLLISSGNLGPAAADQPNTVKAVTPEALGVLSKCRGWLVTRSCRTYHHIRLPSRIAVGDTITILFNSHPKEYRFSVARIALEDDHCTILSEANGDRYHTDKINVPRCYRADEGH
Ga0210407_100855721	3300020579	Soil	FGPVAAGQPDTVEAVTPGGPGVLTKCRSWLVTTSCRTYRHINLPSQIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEGDRHRMDKINIAPCYRSDEGR
Ga0210407_102657602	3300020579	Soil	LKGRDGEGRLQHVALDWRRPMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEGR
Ga0210407_109008691	3300020579	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR
Ga0210403_100304843	3300020580	Soil	MPLRVRIAGLLIAAGGFGPAAADQPDTANAVIPGGAGVLPKCRGWLVTSSCQTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDLCTIVSDADEDRQKIDKINVAPCYRADEGR
Ga0210403_100846004	3300020580	Soil	MPLRVRIAGLLIAVGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCEIFSKAEGDRHLDKINVAPCYGADEG
Ga0210403_105359021	3300020580	Soil	MPPRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEG
Ga0210403_114413051	3300020580	Soil	AADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR
Ga0210399_106775742	3300020581	Soil	MSHSIARRLMPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0210395_114398551	3300020582	Soil	DQPDDVKAAIPGGPGVLTKCRGWLMTTSCRTYHHISLPSRIAVGDTITITFGNDPKEFGFFVARIDLTGQHCAIFSKADGDRHRMDKINVAPCSRADEGR
Ga0210401_100800892	3300020583	Soil	MPLPIRITGLLIAAGSFGPAAADQPDIVEAVIPGGSGVLTKCRGWLVTTSCRSYHHIRLPSRIAVGDTITMLFASHPKQFGFSVARIELKGQHCAILSGADGDRHRMDKIDVAPCYRADEER
Ga0210401_101811893	3300020583	Soil	MPLRVRIAGLLIAAGGFGPAAADQPDTANAVIPGGAGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDLCTIVSDADEDRQKSDKINVAPCYRADEGR
Ga0210406_111068741	3300021168	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEG
Ga0210405_107493431	3300021171	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCEIFSKAEGDRHLDKINVAPCYGADEG
Ga0210405_111476182	3300021171	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0210405_113454301	3300021171	Soil	VRLAHGLDGHRTPVVATRGAERDRRRLMPLRVRIAGLLIAAGGFGPAAADQPDTANAVIPGGAGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEYRFSVARIALKDDLCTIVSDADEDRQKSDKINVAPCYRADEGR
Ga0210405_114330921	3300021171	Soil	MLLCVRIASLLIAAGSFGPVAAGQPDTVEAVTPGGPGVLTKCRSWLVTTSCRTYRHINLPSQIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEGDRHRMDKINIAPCYRSDEGR
Ga0210408_102864021	3300021178	Soil	MPRFHIRIVGFLIAVSSFGAVAADQPDDAKAVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGHHCAIFSKANGDRHRMDKINIAQCNRAEEGR
Ga0210408_112826531	3300021178	Soil	MPLRIRIAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMTRST
Ga0210396_101620191	3300021180	Soil	IRIAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMDKIDVAPCHPADEGR
Ga0213881_101426431	3300021374	Exposed Rock	MARADPMRGAGSAKVMPLRIQIVGLWISASICGAAAADQSKVVKAVTLEGPGILTKCRGWLVTTSCRTYHHITLPSRIAVGDTIRISFGSHPKEFGFHVARIDFNGQQCAIFSEAEGDRQLTDKINVAPCYSADKGR
Ga0210393_115641981	3300021401	Soil	AAGSFGPAAGDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0210385_104300362	3300021402	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKISVARVT
Ga0210397_106591862	3300021403	Soil	MPRFHIRIVGFLIAVSSFGAVAADQPDDAKAVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVAQIDLKGPHCAIFSKANGDRHRMDKINIAQCNRAEEGR
Ga0210394_113116811	3300021420	Soil	RIAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMDKIDVAPCHPADEGR
Ga0210384_108683252	3300021432	Soil	AVAADQPDDAKAVIPGGPGVLTKCRGWVVTTSCRTYHHIALPSRIAVGDTITISFGSHPKEFAFSVARIDLKGHHCAIFSKANGDRHRMDKINIAQCNRAEEGR
Ga0210384_111101711	3300021432	Soil	RDLSLDWLKGRDGEGRFNMSHYRRRLMPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR
Ga0210391_111678321	3300021433	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYWADEG
Ga0210392_114645202	3300021475	Soil	TLRVRIAGLLIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCSVR
Ga0210410_101056041	3300021479	Soil	LIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCSVR
Ga0242676_10324101	3300022512	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLNGQDCAIFSKAEGDRHRMDKINVAPCYQTDEGR
Ga0242662_101782411	3300022533	Soil	MPPRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHRMDKINIAPCYRSDEGR
Ga0242672_11082301	3300022720	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLSSRIAVGDTITISFGGHPKEFGFSAARIDLKGQHCAIFSKAEGDRHLDKINVAPCYR
Ga0209171_106005152	3300025320	Iron-Sulfur Acid Spring	VRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADKER
Ga0207699_111068451	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQSDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKDEHCAIFSEAEGDRHRMDKINISPCYRADEG
Ga0207693_100488164	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLEGRDGGIRFQYVASLARLMPLRIRIAGILIAAGAFGPAAAAQPDKVNAVTPGGPGVLTKCRGWVVASSCRTYHHISLPSRIAVGDTITVSFGSHPKEFRFYVARIDLKRQHCALFSKADGNRHRMDKINVAPCYPAEEGR
Ga0207693_100562933	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRVRIAGLLIAAASFWPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIVAGDTITISFGSHPKEFGFSIARIELKGQHCAIFSKAEGDRNRMDKINITPCYRADEG
Ga0207664_100823123	3300025929	Agricultural Soil	MPLRVRIAGLLIAAGSFGAVAPDQPDTIKAVAPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR
Ga0207665_101464111	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRVRIAGLLIAAGSFGPVAADQPDVKAVTPGGPGVLTKCRGWLVTTSCRTYRHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKG
Ga0257153_11049861	3300026490	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKSVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGD
Ga0207948_10433431	3300027174	Forest Soil	MPLRVRIAGLLIAAGSFGPAAGDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCYRADEGR
Ga0209329_10556302	3300027605	Forest Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCEIFSKAEGDRHLDKINVAPCYRADEG
Ga0209488_106550541	3300027903	Vadose Zone Soil	MPLRVRIGGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDRINVAPCYRADEG
Ga0209526_100735554	3300028047	Forest Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDRINVAPCYRADEG
Ga0209526_103068821	3300028047	Forest Soil	MARQIQHVALDRRRVMALRVRIAGLLIAAGSFSPASADQPDTVKAVTPGGPGVLTKCRGWLVTSSCRTYHHISLPSRIAVGDAITILFGSHPKEYRFAVTRIALKDDHCTIFSDPDEDRHQMDKIDVAPCYRADKGR
Ga0222749_106419301	3300029636	Soil	MPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGAGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGSPPKEFGFSVARIDLKGQHCAIFSKAEGDRHLDKINVAPCYRADEG
Ga0308204_100900881	3300031092	Soil	MSLRVRMAGLLIALGSFGPAAADEPDAVKAVTPGGPGVLTKCRGWLVTSTCRTYRQISLPSRIAVGDTITIRFGSHPKEFRFPVARIDLKAQHCAIFSKADGDRHRMDKINVAPCYRAD
Ga0307477_104528882	3300031753	Hardwood Forest Soil	IAGFLIAAGSLGPGAADQPDTVKAVTPGGPGVLTKCRGWLVTTTCRTYSHISLPSRIAVGDTITILFGSHPKEFGFFVARIDLKGQHCAIFSEAEGDRHRMDKIDVAPCHPADEGR
Ga0307475_102623962	3300031754	Hardwood Forest Soil	MPLRVRIAGLLIAVGSFAPAAADRPDTVNAVTPGGPGVLTKCRGWLVTTSCRTDHHISLPSRIAVGDTITISFGSHPKEFGLWVARIDLKGEHCAIFSNAAGDRHRMDKINVAPCYRAHEGR
Ga0307475_113786681	3300031754	Hardwood Forest Soil	MPLCARIAGLLITAGSLGAVAADQPDTIEAVTPGGPGVLTKCRSWLVTTSCRTYRHISLPSRIAVGNTITISFGSHPKEFGFHVARIDLKGQHCAIFSKAEGDRHRMDKINVAPC
Ga0307473_108152321	3300031820	Hardwood Forest Soil	TLAGPHWLKGRDGEGRLQHVAFDRRKPMPLRVRIAGLLIAAGSFGPAAADQPDTVKAVTPGGPGVLTKCRGWVVTSSCRTYHHISLPSRIAVGDTITISFGGHPKEFGFSVARIDLKDQHCAIFSEAEGDRHRMDKINISPCYRADEGR
Ga0307478_115850792	3300031823	Hardwood Forest Soil	RSNDRRRLMPLRVRIAGLLIAVGSFAPAAADRPDTVNAVTPGGPGVLTKCRGWLVTTSCRTDHHISLPSRIAVGDTITISFGSHPKEFGLWVARIDLKGEHCAIFSNAAGDRHRMDKINVAPCYRAHEGR
Ga0307471_1008186183	3300032180	Hardwood Forest Soil	LCVRIASLLIAAGSFGPVAAGQPDTVEAVTPGGPGVLTKCRSWLVTTSCRTHRHISLPSRIAVGDTITISFGSHPKEFGFYVARIDLKGQHCAIFSKAEADRHRMDKINIAPCYRSDKGR
Ga0307472_1012167511	3300032205	Hardwood Forest Soil	MPLRVRIDQPDAVKAVTPGGPGVLTKCRGWLVTTSCRTYQHISLPSRIAVGDTITISFGSHPKEFGFSVARIDLKGQDCAIFSKAEGDRHRMDKINVAPCSRADEGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094429

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences