Metagenome / Metatranscriptome Family F094485

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094485
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	149 residues
Representative Sequence	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.81 %
% of genes near scaffold ends (potentially truncated)	66.04 %
% of genes from short scaffolds (< 2000 bps)	88.68 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.226 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.868 % of family members)
Environment Ontology (ENVO)	Unclassified (39.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.660 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.75% β-sheet: 32.26% Coil/Unstructured: 56.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.24.1.0: automated matches	d3njea_	3nje	0.70659
d.24.1.5: EpsJ-like	d3cfib_	3cfi	0.69805
d.24.1.5: EpsJ-like	d3ci0j1	3ci0	0.60323
c.52.1.4: Restriction endonuclease BglI	d1dmua_	1dmu	0.5249
e.7.1.1: Inositol monophosphatase/fructose-1,6-bisphosphatase-like	d1ka1a_	1ka1	0.51806

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00801	PKD	3.77
PF06750	DiS_P_DiS	2.83
PF13633	Obsolete Pfam Family	1.89
PF13400	Tad	0.94
PF07963	N_methyl	0.94
PF12728	HTH_17	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	Cell motility [N]	8.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.17 %
Unclassified	root	N/A	2.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.23 %
Unclassified	root	N/A	2.83 %
Viruses	superkingdom	All Organisms → Viruses	0.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.23 %
Unclassified	root	N/A	2.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.51 %
Unclassified	root	N/A	2.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.51 %
Unclassified	root	N/A	2.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	90.57 %
Unclassified	root	N/A	2.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	89.62 %
Unclassified	root	N/A	2.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	89.62 %
Unclassified	root	N/A	2.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11256796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300000956\|JGI10216J12902_120197045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300001686\|C688J18823_10003583	All Organisms → cellular organisms → Bacteria	9817	Open in IMG/M
3300003267\|soilL1_10052088	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300003324\|soilH2_10342816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2879	Open in IMG/M
3300003995\|Ga0055438_10121646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300004081\|Ga0063454_100400476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300004114\|Ga0062593_100327974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1323	Open in IMG/M
3300004153\|Ga0063455_100669477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300004153\|Ga0063455_101187668	Not Available	571	Open in IMG/M
3300004156\|Ga0062589_100772789	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300004463\|Ga0063356_100093770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3227	Open in IMG/M
3300004479\|Ga0062595_102092457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300005093\|Ga0062594_102344114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300005328\|Ga0070676_10214415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1268	Open in IMG/M
3300005328\|Ga0070676_10979750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300005331\|Ga0070670_100695547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300005332\|Ga0066388_104339078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300005334\|Ga0068869_100153496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1787	Open in IMG/M
3300005338\|Ga0068868_100940449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300005341\|Ga0070691_10142238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300005364\|Ga0070673_100870975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300005365\|Ga0070688_100308195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1146	Open in IMG/M
3300005437\|Ga0070710_10097871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1742	Open in IMG/M
3300005439\|Ga0070711_100181690	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300005440\|Ga0070705_100545939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300005466\|Ga0070685_10105528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1727	Open in IMG/M
3300005518\|Ga0070699_100372819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1288	Open in IMG/M
3300005530\|Ga0070679_101116654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300005546\|Ga0070696_100687467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300005547\|Ga0070693_100532047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300005549\|Ga0070704_100851192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300005564\|Ga0070664_100378179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1292	Open in IMG/M
3300005615\|Ga0070702_100450211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300005764\|Ga0066903_104819110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300005844\|Ga0068862_100849880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	894	Open in IMG/M
3300005844\|Ga0068862_102447372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300006163\|Ga0070715_10108380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1306	Open in IMG/M
3300006755\|Ga0079222_11281731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300009094\|Ga0111539_12025473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300009098\|Ga0105245_11558511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300009098\|Ga0105245_11735650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300009098\|Ga0105245_13223328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300009148\|Ga0105243_10684987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300009174\|Ga0105241_10559322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300009551\|Ga0105238_10454798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1278	Open in IMG/M
3300010044\|Ga0126310_10291536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300010371\|Ga0134125_10736689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300010375\|Ga0105239_10967200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300010399\|Ga0134127_10876544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300011443\|Ga0137457_1152504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300012469\|Ga0150984_103513404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3839	Open in IMG/M
3300012469\|Ga0150984_104037103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2524	Open in IMG/M
3300012469\|Ga0150984_115853990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300012895\|Ga0157309_10245937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300012907\|Ga0157283_10131193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300012911\|Ga0157301_10090219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	881	Open in IMG/M
3300012958\|Ga0164299_10183994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300012960\|Ga0164301_10176132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1338	Open in IMG/M
3300012961\|Ga0164302_10166328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1318	Open in IMG/M
3300012984\|Ga0164309_10154870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1528	Open in IMG/M
3300012984\|Ga0164309_10350446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300012985\|Ga0164308_11112157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300012987\|Ga0164307_11150437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300013306\|Ga0163162_11494523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300013307\|Ga0157372_11703899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300014301\|Ga0075323_1119225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300014325\|Ga0163163_12420032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300014326\|Ga0157380_13428187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300015077\|Ga0173483_10268772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300015200\|Ga0173480_10844250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300015371\|Ga0132258_13629741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300015371\|Ga0132258_13682503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300017792\|Ga0163161_11351053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300019356\|Ga0173481_10034175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1655	Open in IMG/M
3300022886\|Ga0247746_1070449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300025899\|Ga0207642_10151624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300025900\|Ga0207710_10155921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1110	Open in IMG/M
3300025907\|Ga0207645_10053152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2588	Open in IMG/M
3300025916\|Ga0207663_10009700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5094	Open in IMG/M
3300025917\|Ga0207660_11041556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300025921\|Ga0207652_10888070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300025924\|Ga0207694_10330503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1259	Open in IMG/M
3300025927\|Ga0207687_10860399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300025935\|Ga0207709_10786034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300025945\|Ga0207679_10426435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300025961\|Ga0207712_11182181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300025981\|Ga0207640_10596649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300026023\|Ga0207677_11241312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300026075\|Ga0207708_10484862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300026095\|Ga0207676_10595413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300026142\|Ga0207698_11182729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300028380\|Ga0268265_10343169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1361	Open in IMG/M
3300028381\|Ga0268264_12074734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300028802\|Ga0307503_10016185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2346	Open in IMG/M
3300028810\|Ga0307294_10093291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	944	Open in IMG/M
3300028811\|Ga0307292_10264735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300028876\|Ga0307286_10165724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300031099\|Ga0308181_1168301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300031366\|Ga0307506_10018786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1685	Open in IMG/M
3300031366\|Ga0307506_10079364	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300031740\|Ga0307468_100049135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2188	Open in IMG/M
3300031997\|Ga0315278_11696206	Not Available	601	Open in IMG/M
3300032275\|Ga0315270_10448774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300032401\|Ga0315275_10238691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2029	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.38%
Host-Associated	Host-Associated	39.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.66%
Plants	Host-Associated → Plants	39.62%
Aquatic	Environmental → Aquatic	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.09%
Freshwater	Environmental → Aquatic → Freshwater	2.83%
Marine	Environmental → Aquatic → Marine	0.94%
Sediment	Environmental → Aquatic → Sediment	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.02%
Loam	Environmental → Terrestrial → Soil → Loam	21.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.43%
Lake	Environmental → Aquatic → Freshwater → Lake	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.49%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_112567961	3300000891	Soil	TTATITNRRDVLADGRVAIDQMSKQLRQAESVDVASSSQSTVTFDTYIDGTAATVIWRVTGTAAPYTLEQSRDGGAHFAALVSPLLCKTSTDPGCSLHPPFTLVSHAGVIDQVTIDLTFQTTTSSVDLISDVQLRNVES*
JGI10216J12902_1201970451	3300000956	Soil	TNTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTAADTGCSTDPFTYVQHAGVVDQVTIDLTFETSTSTVDLVSDVQLRNADNSDG*
C688J18823_1000358310	3300001686	Soil	MAVMSIVATAMMAVAMRSFTTTNTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTETTIEWRLTGSSPPYTLEQSRDADSXTPHFAPLVSPILCRTASDAGCSADPFTYVQHAGVVDQVTIDLTFETSTSTVDLISDVQLRNAESDG*
soilL1_100520883	3300003267	Sugarcane Root And Bulk Soil	ELVVTMAVMSIVATAMMAVAMRSFTTTSTITNRRDVLVDGRVAIDQMTKQLRQGESVDLTASDASTLKFSGYIDGTETTIVWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTSSDTGCSADPFTYIQHAGVVDQVTIDLTFQTNTSTVDLVSDVQLRNVET*
soilH2_103428162	3300003324	Sugarcane Root And Bulk Soil	MAVMSIVATAMMAVAMRSFTTTNTITNRRDVLVDGRVAIDQMTKQLRQAESIDASSTESLLKFDTYIDGTATTIVWRVTGSSPPYTLEQSRDGGAHFAPLVSPLLCKTSADTGCADHPPFTQSPPGGPVDRITIDLTFLNSTSTVDLISDVQLRNVESEDS*
soilH2_104331762	3300003324	Sugarcane Root And Bulk Soil	AIDQMTKQLRQGESVDQAESSASQLTFDTYINGEAAVVTWRVVGSQAPYTLEQSRDILSLVGDGGFAPLVSPLLCKTASDPGCAADPFTYTTHGSVVDQVTIDLTFQTNTSSIDLISDVQLRNAEEDG*
Ga0055438_101216462	3300003995	Natural And Restored Wetlands	RRDVLTDGRVAIDQMSKQLRQGESVDPSSSASTMTFDTYIDGVATTIVWRVTGSAAPYTLEQSRDGGTTFAPLVSPIMCKTATDPGCSADPFTYTSHGGVVDQVTIDLTFQTNTSSIDLISDVELRNVQES*
Ga0063454_1004004762	3300004081	Soil	MAVMSIVATAMMAVAMRSFTTTNTITNRRDVLADGRIAIDQMTKQLRQAESVDLTDSNAYTLKFSGYIDGTQTTIEWRVTGTGVPYTLEQSRDAGAATPHFAPLVSPILCKASTDAGCSADPFTLVQHAGVVDQVTIDLTFQTDTSTVDLVSDVQLRNVES*
Ga0062593_1003279741	3300004114	Soil	VVTMAVMSVVATAMMAVAFRSFTTTATITNRRDVLADGRVAIDQMSKQLRQAESVDVASSSQSTVTFDTYIDGTAATVIWRVTGTAAPYTLEQSRDGGAHFAALVSPLLCKTSTDPGCSLHPPFTLVSHAGVIDQVTIDLTFQTTTSSVDLISDVQLRNVES*
Ga0063455_1006694771	3300004153	Soil	VVTMAVMSIVATSMMAVAMRSFTTTNTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSDASTLKFSGYIDGTQTTIVWRLTGTGAPYTLEQSRDGGAHYAPLVSPILCKTASDAGCSADPFTYVEHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0063455_1011876682	3300004153	Soil	RDVLTDGRIAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTETTIEWRLTGSSPPYTLEQSRDADSATPHFAPLVSPILCRTASDAGCSADPFTYVQHAGVVDQVTIDLTFETSTSTVDLVSDVQLRNAESDG*
Ga0062589_1007727892	3300004156	Soil	VLTDGRTAIDQMTKELRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIQCKTAADTGCSADPFTYVQHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNAESSDG*
Ga0063356_1000937701	3300004463	Arabidopsis Thaliana Rhizosphere	MAVMSIVATAMIAVGMQAFTTTATITDRRDVLSDGRVAIDQMSKQLRQGESVDTTVSTASMLKFSTYIDGTAATVIWRVTGSSAPYTLEQSRDNGAHYAPLVSPLQCKAAGTGCSAPFTYVSHGGVVDQVTIDLTFQTTTSTIDLVSDVQLRNADS*
Ga0062595_1020924571	3300004479	Soil	ATSVMSVAFRLFTTTNTVTNRRDVLTDGRQAIDQMTKQLRQGIAVDQANSSASQLAFTTYIDGKAAPVVWRVTGTKAPYTLEQSRDIASIAGDGNFAPLVSPLLCKTKSDAGCTADPFTYTSHGGVVDQVTIDLTFQTDTSSIDLISDVDLRNASDEDT*
Ga0062594_1023441142	3300005093	Soil	TTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQVASSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTASDAGCSAHPPFTYVAHGGVVDQVTIDLTFQTTTSTIDLISDVQLRNVES*
Ga0070676_102144152	3300005328	Miscanthus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTVSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQ
Ga0070676_109797502	3300005328	Miscanthus Rhizosphere	MRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSEDPFTLIQHAGVVDQVTIDLTFQTNTSTVDLISDVQLRNVET*
Ga0070670_1006955472	3300005331	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0066388_1043390782	3300005332	Tropical Forest Soil	MAVMSIVATAMMAVAMRSFTTTNTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQTTIVWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNAESDS*
Ga0068869_1001534962	3300005334	Miscanthus Rhizosphere	ATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET*
Ga0068868_1009404491	3300005338	Miscanthus Rhizosphere	TSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTVSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET*
Ga0070691_101422382	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSEDPFTLIQHAGVVDQVTIDLTFQTNTSTVDLISDVQLRNVET*
Ga0070673_1008709751	3300005364	Switchgrass Rhizosphere	RSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0070688_1003081952	3300005365	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0070710_100978712	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAVMSIVATSMMLVAMRSFTTTNTITNRRDVLTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIMCKTAADTGCSADPFTYIQHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNADSSDS*
Ga0070711_1001816902	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAVMSIVATSMMLVAMRSFTTTNTITNRRDVLTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIMCKTAADTGCSADPFTYIEHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNADSSDS*
Ga0070705_1005459391	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VVTMAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0070685_101055282	3300005466	Switchgrass Rhizosphere	LVVTMAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTVSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0070699_1003728192	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAVMSIVATAMIAVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQAASSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTTSDAGCSAHPPFTYVTHGGVVDQVTIDLTFQTTTSTIDLISDVQLRNVES*
Ga0070679_1011166541	3300005530	Corn Rhizosphere	MAVMSIVATAMIAVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQVASSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTASDAGCSAHPPFTYVTHGGVVDQVTIDLTFQTTTSTIDLISDVQLRNVES*
Ga0070696_1006874671	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDL
Ga0070693_1005320472	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVD
Ga0070704_1008511921	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AMIAVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQAASSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTTSDAGCSAHPPFTYVTHGGVVDQVTIDLTFQTTTSTIDLISDVQLRNVES*
Ga0070664_1003781792	3300005564	Corn Rhizosphere	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRVAIDQMTKQLRQGESVDQSVSDGSTITFDSYIDGVPATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCRFATDPGCSADPFSYTVYEGVVDEVTIDLTFLTDTSSFDLISDVHLRNS*
Ga0070702_1004502112	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0066903_1048191101	3300005764	Tropical Forest Soil	TAMMAVAMRSFTTTNTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTASNASTLKFSGYIDGTQTTIVWQVTGTAAPYTLEQSRDGGAHFAPLVSPVLCKTASDPGCSTDPFTYVQHAGVVDQVTIDLTFETSTSTVDLVSDMQLRNADSSDS*
Ga0068862_1008498802	3300005844	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET*
Ga0068862_1024473722	3300005844	Switchgrass Rhizosphere	MAVAFRTMTTTSTITNRRDVLTDGRIAIDQMTKQLRQGESVDLSASNASTLTFDTYIDGVPATIVWRVTGSYPYTLEQSRDGGAHFAPLVSPIKCIVKNVLNGCAADPFTLTQHGGVVDQVTIDLTFLTNTSSIDLISDVQLRNAEE*
Ga0070715_101083802	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RSFTTTNTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTVSNASTLKFSGYIDGTQSIIEWRVTGSKAPYTLEQSRDGGAHFAPLVSPILCKTASDPGCSVDPFTYIQQAGVVNQVTIDLTFVTDTSTVDLVSDVQLRNVDTSGG*
Ga0079222_112817312	3300006755	Agricultural Soil	TTNTITNRRDVLTDGRTAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGSQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIMCKTAADTGCSSDPFTYVQHAGVVDQVTIDLTFETSTSTVDLVSDVQLRNADTDS*
Ga0111539_120254732	3300009094	Populus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTAADTGCSEDPFTMIQHAGVVDQVTIDLTFETNTSTVDLIS
Ga0105245_115585112	3300009098	Miscanthus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLVDGRVAIDQMTKQLRQGESVDLTASDGSTLKFTGYIDGTDTTIVWRVTGSSAPYTLEQSRDGGAHFAPLVSPVLCQTSADTGCSADPFTYVQHAGVVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0105245_117356501	3300009098	Miscanthus Rhizosphere	MAVMSIVATSMMLVAMRSFTTTNTITNRRDVLTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGVHFAPLVSPILCKTAADAGCSADPFTYVQHAGV
Ga0105245_132233282	3300009098	Miscanthus Rhizosphere	ITNRRDVLADGRIAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET*
Ga0105243_106849872	3300009148	Miscanthus Rhizosphere	AVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQAASSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTASDAGCSAHPPFTYVTHGGVVDQVTIDLTFQTTTSTIDLISDVQLRNVES*
Ga0105241_105593222	3300009174	Corn Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPIRCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0105238_104547982	3300009551	Corn Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGRAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET*
Ga0126310_102915362	3300010044	Serpentine Soil	SVMSVAFRLFTTTSTVTNRRDVLTDGRQAIDQMTKQLRQGESVDQTASSASTMTFDTYIDGVAATIVWRVTGVEAPYTLEQSRDGEANFAPLVSPILCKTAADPGCSADPFTFTSHGGLIDQVTIDLTFQTNTSSIDLISDVQLRNAEQS*
Ga0134125_107366892	3300010371	Terrestrial Soil	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGVVDQVTIDLTFDTNTSSVDLISDVQLRNVET*
Ga0105239_109672002	3300010375	Corn Rhizosphere	LADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSEDPFTLIQHAGVVDQVTIDLTFQTNTSTVDLISDVQLRNVET*
Ga0134127_108765441	3300010399	Terrestrial Soil	MAVMSIVATAMIAVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQAVSSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTASDAGCSAHPPFTYVTHGGVVDQVTIDLTF
Ga0137457_11525041	3300011443	Soil	MGVMSIVATSVMAVAFRTFTTTSTITNRRDVLTDGRQAIDQMTKQLRQGESVDQSVSTGSTLTFDTYIDGVAATVVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCKTASDDGCSADPFTYTSHGGVVDQVTIDLTFLTTTSSFDLISDVQLRNAEE*
Ga0150984_1035134042	3300012469	Avena Fatua Rhizosphere	MAVMSIVATAMMAVAMRSFTTTNTITNRRDVLADGRIAIDQMTKQLRQAESVDLTASNAYTLKFSGYIDGTQTTIEWRVAGTGAPYTLEQSRDAGAATPHFAPLVSPILCKASTDAGCSADPFTLVQHAGVVDQVTIDLTFQTDTSTVDLVSDVQLRNVES*
Ga0150984_1040371031	3300012469	Avena Fatua Rhizosphere	MAVMSIVATAMMAVAMRSFTTTNTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTETTIEWRLTGSSPPYTLEQSRDADSATPHFAPLVSPILCRTASDAGCSADPFTYVQHAGVVDQVTID
Ga0150984_1158539902	3300012469	Avena Fatua Rhizosphere	MAVMSIVATSMMAVAMRSFTTTNTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSDASTLKFSGYIDGTQTTIVWRLTGTAAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVEHAGIVDQVTIDLTFETST
Ga0157309_102459371	3300012895	Soil	VLADGRVAIDQMSKQLRQAESVDVASSSQSTVTFDTYIDGTAATVIWRVTGTAAPYTLEQSRDGGAHFAALVSPLLCKTSTDPGCSLHPPFTLVSHAGVIDQVTIDLTFQTPTSSVDLISDVQLRNVES*
Ga0157283_101311932	3300012907	Soil	MAVMSIVATAMMAVAMRSFTTTNTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTASNASTLKFSGYIDGTQTTIVWRVTGTGAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGVVDQVTIDLTFQTNTSTVDLVSDVQLRNVES*
Ga0157301_100902192	3300012911	Soil	RDVLADGRVAIDQMSKQLRQAESVDVASSSQSTVTFDTYIDGTAATVIWRVTGTAAPYTLEQSRDGGAHFAALVSPLLCKTSTDPGCSLHPPFTLVSHAGVIDQVTIDLTFQTTTSSVDLISDVQLRNVES*
Ga0164299_101839941	3300012958	Soil	MAVAMRSFTTTNTITNRRDVISDGRVAIDQMTKQLRQGESVDLTASNASTLKFSGYIDGTQTTIVWQVTGTTAPYTLEQSRDGGAHFAPLVSPVLCKTAADTGCSADPFTYVQHGGVVDQVTIDLTFETSTSTVDLVSDVQLRNADNLDS*
Ga0164301_101761321	3300012960	Soil	RDVLTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIMCKTAADTGCSADPFTYIEHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNADSSDS*
Ga0164302_101663282	3300012961	Soil	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLVDGRVAIDQMTKQLRQGESVDLTASDASTLKFSGYIDGTDTTIVWRVTGTSAPYTLEQSRDGGAHFAPLVSPVLCQTASDTGCSADPFTYVQHAGVVDQVTIDLTFETNTSTVDLVSDVQLRNVES*
Ga0164309_101548702	3300012984	Soil	MAVMSVVATAMMAVAMRSFTTTNTITNRRDVLSDGRVAIDQMTKQLRQGESVDLTASNASTLKFSGYIDGTQTTIVWQVTGTTAPYTLEQSRDGGAHFAPLVSPVLCKTAADTGCSADPFTYVQHGGVVDQVTIDLTFETSTSTVDLVSDVQLRNADNSDS*
Ga0164309_103504461	3300012984	Soil	MLVAMRSFTTTNTITNRRDVLTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSPDGGAHVAPLVSPIMCKTAADTGCSADPFTYIQHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNADSSAS*
Ga0164308_111121572	3300012985	Soil	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLVDGRVAIDQMTKQLRQGESVDLTASNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTLIQHAGVVDQVTIDLTFETNTSTVDLVS
Ga0164307_111504372	3300012987	Soil	MAVMSIVATSMMLVAMRSFTTTNTITNRRDVLTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIMCKTAADTGCSADPFTYIQHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNANSSDG*
Ga0163162_114945231	3300013306	Switchgrass Rhizosphere	RDVLTDGRIAIDQMTKQLRQGESVDLTVSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0157372_117038992	3300013307	Corn Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGVAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0075323_11192251	3300014301	Natural And Restored Wetlands	LVELVVTMAVMSIVATSVMSVAFRLFTTTNTVTNRRDVLTDGRQAIDQMTKQLRQAESVDMVASNDYTLTFDSYIDGTPVTIVWRVTGSAPPYTLEQSRDGGANFAPLVSPLLCKADLSSPGCQTTESDGVTYDHLPFTYTSHGGVVDQVTIDLAFQTNTSSIDLISDVQLRNAEES*
Ga0163163_124200322	3300014325	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFET
Ga0157380_134281871	3300014326	Switchgrass Rhizosphere	RRDVLADGRIAIDQMTKQLWQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET*
Ga0173483_102687721	3300015077	Soil	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTASNASTLKFSGYIDGTQTTIVWRVTGTGAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGVVDQVTIDLTFQTNTSTVDLVSDVQLRNVES*
Ga0173480_108442502	3300015200	Soil	SFTTTNTITNRRDVFTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIMCKTAADTGCSADPFTYIEHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNADSSDS*
Ga0132258_136297412	3300015371	Arabidopsis Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLVDGRVAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGVHFAPLVSPILCKTASDTGCSADPFTYVQHAGVVDQVTIDLTFQTNTSTVDLVSDVQLRNVET*
Ga0132258_136825032	3300015371	Arabidopsis Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLVDGRVAIDQMTKQLRQGESVDLAASNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTLIQHAGVVDQVTIDLTFETNTSTVDLISDVQLRNVET*
Ga0163161_113510531	3300017792	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVT
Ga0173481_100341752	3300019356	Soil	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRVAIDQMTKQLRQGESVDQSVSDGSTITFDSYIDGVPATIVWRVTGSYPYTLKQSRDGGANFAPLVSPIKCRFATDPGCSADPFSYTVYEGVVDEVTIDLTFLTDTSSFDLISDVHLRNS
Ga0247746_10704492	3300022886	Soil	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRVAIDQMTKQLRQGESVDQSVSDGSTITFDSYIDGVPATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCRFATDPGCSADPFSYTVYEGVVDEVTIDL
Ga0207642_101516242	3300025899	Miscanthus Rhizosphere	TSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET
Ga0207710_101559212	3300025900	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET
Ga0207645_100531522	3300025907	Miscanthus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET
Ga0207663_100097007	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RDVLTDGRVAIDQMTKQLRQGESVDLTTSNASTLKFSGYIDGTQATIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPIMCKTAADTGCSADPFTYIEHAGVVDQVTIDLTFQTSTSTVDLVSDVQLRNADSSDS
Ga0207660_110415561	3300025917	Corn Rhizosphere	MAVMSIVATAMIAVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDLTVSDGSTITFDSYIDGVPATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCRFATDTGCSADPFSYTVYEGVVDEVTIDLTFLTD
Ga0207652_108880702	3300025921	Corn Rhizosphere	MAVMSIVATAMIAVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQVASSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTASDAGCSAHPPFTYVTHGGVVDQVTIDLTFQTTTSTIDLISDVQLRNVES
Ga0207694_103305032	3300025924	Corn Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGRAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNVET
Ga0207687_108603992	3300025927	Miscanthus Rhizosphere	NRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSEDPFTLIQHAGVVDQVTIDLTFQTNTSTVDLISDVQLRNVET
Ga0207709_107860342	3300025935	Miscanthus Rhizosphere	MAVMSIVATAMIAVAMRAFTTTGTIINRRDVLADGRVAIDQMSKQLRQGESVDQAVSSASTLKFSTYIDGTATTVVWRVTGTSAPYTLEQSRDGGAHYAPLVSPLVCKTTSDTGCSAHPPFTYVTHGGV
Ga0207679_104264352	3300025945	Corn Rhizosphere	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRVAIDQMTKQLRQGESVDQSVSDGSTITFDSYIDGVPATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCRFATDPGCSADPFSYTVYEGVVDEVTIDLTFLTDTSSFDLISDVHLRNS
Ga0207712_111821812	3300025961	Switchgrass Rhizosphere	TLVELMVTMAVMSIVATSVMAVAFRTMTTTSTITNRRDVLTDGRIAIDQMTKQLRQGESVDLSASNASTLTFDTYIDGVPATIVWRVTGSYPYTLEQSRDGGAHFAPLVSPIKCIVKNVLNGCAADPFTLTQHGGVVDQVTIDLTFLTNTSSIDLISDVQLRNAEE
Ga0207640_105966491	3300025981	Corn Rhizosphere	AVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSEDPFTLIQHAGVVDQVTIDLTFQTNTSTVDLISDVQLRNVET
Ga0207677_112413121	3300026023	Miscanthus Rhizosphere	TSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTVSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET
Ga0207708_104848622	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLTDGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTASDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLVSDVQLRNVET
Ga0207676_105954132	3300026095	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLRNV
Ga0207698_111827291	3300026142	Corn Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETSTSTVDLISDVQLR
Ga0268265_103431692	3300028380	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGSSAPYTLEQSRDGGAHFAPLVSPILCKTATDTGCSADPFTYVQHAGIVDQVTIDLTFETNTSTVDLISDVQLRNVET
Ga0268264_120747342	3300028381	Switchgrass Rhizosphere	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLADGRIAIDQMTKQLRQGESVDLTTSNAYTLKFSGYIDGTQSTIEWRVTGTSAPYTLEQSRDGGAHFAPLVSPILCKTASNTGCSADPFTYVQHAGIVD
Ga0307503_100161852	3300028802	Soil	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRTAIDQMTKQLRQGESVDQAASDGSTITFDTYIDGVPATIVWRVTGTYPYTLEQSRDGGANFAPLVSPIKCKLATDAGCSADPFTYTIYGGYVDQVTIDLTFLTDTSSFDLISDVHLRNAQQ
Ga0307294_100932911	3300028810	Soil	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRTAIDQMTKQLRQGESVDQTVSDGSTITFDSYIDGVPATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCRFATDPDCSADPFSYTVYEGVVDEVTIDLTFLTDTSSFDLISDVHLR
Ga0307292_102647351	3300028811	Soil	MMVMGIVATAVMAVAMRSVLTTSTITNRRDVLSDGRVAIDQMTKQLRQGEEIDAAGSSASQLTFSSYLNGVPTTIVWRVTGASAPYTLEQSRDGGATFAPLVSPLVCKTASDPGCTHDPFTQTVHGGVVDQVTIQLKFQTNTSTVELISDVQLRNADT
Ga0307286_101657241	3300028876	Soil	VAFRSFTTTSTITNRRDVLTDGRTAIDQMTKQLRQGESVDQTVSDGSTITFDSYIDGVPATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCRFATDPDCSADPFSYTVYEGVVDEVTIDLTFLTDTSSFDLISDVHLRNAQT
Ga0308181_11683011	3300031099	Soil	IVATSVMAVAFRSFTTTSTITNRRDVLTDGRTAIDQMTKQLRQGESVDQTVSDGSTITFDSFIDGVPATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCRFATDPDCSADPFSYTVYEGVVDEVTIDLTFLTDTSSFDLISDVHLRNAQT
Ga0307506_100187861	3300031366	Soil	AVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRQAIDQMTKQLRQGESVDQAVSTGSTLTFDTYIDGVAATIVWRVTGSYPYTLEQSRDGGATFAPLVSPIKCKLATDAGCSVDPFTYTSHGGVVDQVTIDLTFLTTTSSFDLISDVQLRNAEE
Ga0307506_100793641	3300031366	Soil	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRQAIDQMTKQLRQGESVDQAVSTGSTLTFDTYIDGVAATIVWRVSGSYPYTLEQSRDGGATFAPLVSPIKCKLATDAGCSVDPFTYTSHGGVVDQVTIDLTFLTSTSSFDLI
Ga0307468_1000491352	3300031740	Hardwood Forest Soil	MAVMSIVATAMMAVAMRSFTTTSTITNRRDVLVDGRVAIDQMTKQLRQGESVDLAASDASTLKFTGYIDGTDTTIVGRVTGSSAPYTLEQSRDGGAHFAPLVSPVLCQTSADTGCSADPFTYVQHAGVVDQVTIDLTFQTNTSTVDLVSDVQLRNVES
Ga0315278_116962062	3300031997	Sediment	VTNRRDVLTDGRTAIDQMTKQLRQAESVDVANDGSSMTMHTYIDGVDAMIAWQVTGSAPPYTLEQSRTGTPPFAPLVSPLACKTVSDAGCEAHPPFTATPHGGIVDQVTIDLTFVTNTSTIDLISDVQLRNVES
Ga0315270_104487741	3300032275	Sediment	MAVMSIVATSVMAVAFRSFTTTSTITNRRDVLTDGRQAIDQMTKQLRQGESVDQAVSTGSTLTFDTYIDGVAATIVWRVTGSYPYTLEQSRDGGANFAPLVSPIKCKLGTDSGCSVDPFTYTSHGGVVDQVTIDLTFLTT
Ga0315275_102386911	3300032401	Sediment	TSTITNRRDVLTDGRVAIDQMTKQLRQGESVDQAVSSGSTLTFDTYIDGVAATVVWRVTGAYPYTLEQSRDGGANFAPLVSPIKCKTATDPGCSVAPFTYTSHGGVVDQVTIDLTFVTTTSTIDLISDVQLRNAES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094485

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences