Metagenome Family F094558

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094558
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	106 residues
Representative Sequence	PDPLLPLSDEVVAARHAGTALYHYALAAARHDELTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGQR
Number of Associated Samples	85
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.94 %
% of genes near scaffold ends (potentially truncated)	94.34 %
% of genes from short scaffolds (< 2000 bps)	97.17 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.604 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.528 % of family members)
Environment Ontology (ENVO)	Unclassified (37.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.77% β-sheet: 0.00% Coil/Unstructured: 39.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01545	Cation_efflux	5.66
PF11866	DUF3386	4.72
PF01475	FUR	1.89
PF02817	E3_binding	0.94
PF05643	DUF799	0.94
PF08240	ADH_N	0.94
PF03203	MerC	0.94
PF12269	CpG_bind_C	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	5.66
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	5.66
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	5.66
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	1.89
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.94
COG4380	Uncharacterized conserved protein, DUF799 domain	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.66 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.94 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.89 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.94 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.94 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.89 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.94 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.94 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.94 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.89 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.94 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.94 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.89 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.94 %
Variovorax beijingensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax beijingensis	0.94 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.89 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.94 %
Variovorax beijingensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax beijingensis	0.94 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.94 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.94 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2339859	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100780156	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100781135	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300000789\|JGI1027J11758_12992258	Not Available	685	Open in IMG/M
3300000789\|JGI1027J11758_13002391	Not Available	839	Open in IMG/M
3300000955\|JGI1027J12803_108597441	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300000956\|JGI10216J12902_101868368	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300000956\|JGI10216J12902_113816691	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300001431\|F14TB_100651736	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300004633\|Ga0066395_10602123	Not Available	644	Open in IMG/M
3300004633\|Ga0066395_10774757	Not Available	574	Open in IMG/M
3300005181\|Ga0066678_10269726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1106	Open in IMG/M
3300005332\|Ga0066388_100802108	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300005332\|Ga0066388_103553208	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005332\|Ga0066388_104543652	Not Available	707	Open in IMG/M
3300005365\|Ga0070688_101432972	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005445\|Ga0070708_101240888	Not Available	697	Open in IMG/M
3300005447\|Ga0066689_10628079	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005467\|Ga0070706_100842529	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005467\|Ga0070706_102083734	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005549\|Ga0070704_101176953	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300005557\|Ga0066704_10667310	Not Available	659	Open in IMG/M
3300005713\|Ga0066905_102095070	Not Available	526	Open in IMG/M
3300005713\|Ga0066905_102220308	Not Available	512	Open in IMG/M
3300005719\|Ga0068861_100245187	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300005764\|Ga0066903_100511763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax beijingensis	2039	Open in IMG/M
3300006796\|Ga0066665_10588956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	897	Open in IMG/M
3300006800\|Ga0066660_11002940	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006847\|Ga0075431_100101065	All Organisms → cellular organisms → Bacteria	2975	Open in IMG/M
3300006853\|Ga0075420_101684742	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300006880\|Ga0075429_101267140	Not Available	643	Open in IMG/M
3300006904\|Ga0075424_100815442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	996	Open in IMG/M
3300006969\|Ga0075419_11323213	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300007255\|Ga0099791_10108162	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300009012\|Ga0066710_100863509	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300009012\|Ga0066710_101867231	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300009012\|Ga0066710_102168007	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300009089\|Ga0099828_10393465	Not Available	1250	Open in IMG/M
3300009090\|Ga0099827_10921179	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300009098\|Ga0105245_12510209	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300009143\|Ga0099792_10490067	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300009147\|Ga0114129_10888263	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300009147\|Ga0114129_13434539	Not Available	508	Open in IMG/M
3300009162\|Ga0075423_10327456	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300009162\|Ga0075423_10409473	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300010043\|Ga0126380_10335076	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300010043\|Ga0126380_11189882	Not Available	656	Open in IMG/M
3300010043\|Ga0126380_11923327	Not Available	539	Open in IMG/M
3300010046\|Ga0126384_11271635	Not Available	681	Open in IMG/M
3300010047\|Ga0126382_10731106	Not Available	834	Open in IMG/M
3300010336\|Ga0134071_10745760	Not Available	521	Open in IMG/M
3300010358\|Ga0126370_12288958	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010358\|Ga0126370_12398792	Not Available	524	Open in IMG/M
3300010359\|Ga0126376_11679515	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300010359\|Ga0126376_13145992	Not Available	511	Open in IMG/M
3300010360\|Ga0126372_11533793	Not Available	703	Open in IMG/M
3300010360\|Ga0126372_11593104	Not Available	692	Open in IMG/M
3300010360\|Ga0126372_12606052	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300010362\|Ga0126377_10372512	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1431	Open in IMG/M
3300010362\|Ga0126377_10460199	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300010362\|Ga0126377_10585313	Not Available	1159	Open in IMG/M
3300010366\|Ga0126379_13504149	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300010398\|Ga0126383_12387611	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010400\|Ga0134122_12451460	Not Available	570	Open in IMG/M
3300011119\|Ga0105246_11406813	Not Available	651	Open in IMG/M
3300011270\|Ga0137391_11114764	Not Available	637	Open in IMG/M
3300012096\|Ga0137389_11298154	Not Available	621	Open in IMG/M
3300012204\|Ga0137374_10173130	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1895	Open in IMG/M
3300012206\|Ga0137380_10703957	Not Available	877	Open in IMG/M
3300012211\|Ga0137377_11381281	Not Available	633	Open in IMG/M
3300012349\|Ga0137387_10360242	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300012350\|Ga0137372_10653115	Not Available	766	Open in IMG/M
3300012351\|Ga0137386_10948362	Not Available	614	Open in IMG/M
3300012353\|Ga0137367_10671386	Not Available	723	Open in IMG/M
3300012356\|Ga0137371_11332974	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012357\|Ga0137384_10920740	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300012359\|Ga0137385_10561477	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300012360\|Ga0137375_11062189	Not Available	632	Open in IMG/M
3300012363\|Ga0137390_10499336	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300012918\|Ga0137396_10749501	Not Available	719	Open in IMG/M
3300012923\|Ga0137359_10280590	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1485	Open in IMG/M
3300012925\|Ga0137419_10805164	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300012929\|Ga0137404_12049448	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012930\|Ga0137407_11302163	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012944\|Ga0137410_10106587	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2085	Open in IMG/M
3300012948\|Ga0126375_10353217	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300012971\|Ga0126369_12122005	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300015201\|Ga0173478_10651615	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300015374\|Ga0132255_106168323	Not Available	507	Open in IMG/M
3300016270\|Ga0182036_10683585	Not Available	829	Open in IMG/M
3300018431\|Ga0066655_10841409	Not Available	625	Open in IMG/M
3300018433\|Ga0066667_10637961	Not Available	890	Open in IMG/M
3300018468\|Ga0066662_12660429	Not Available	529	Open in IMG/M
3300025910\|Ga0207684_10693813	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300025910\|Ga0207684_11363794	Not Available	582	Open in IMG/M
3300025927\|Ga0207687_11687795	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300025961\|Ga0207712_10980466	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300026075\|Ga0207708_11492039	Not Available	594	Open in IMG/M
3300027874\|Ga0209465_10424249	Not Available	665	Open in IMG/M
3300027880\|Ga0209481_10593126	Not Available	574	Open in IMG/M
3300027882\|Ga0209590_10760489	Not Available	617	Open in IMG/M
3300027903\|Ga0209488_10459255	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300028878\|Ga0307278_10221250	Not Available	842	Open in IMG/M
3300031941\|Ga0310912_11168516	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031947\|Ga0310909_11180180	Not Available	620	Open in IMG/M
3300033004\|Ga0335084_12404406	Not Available	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.91%
Host-Associated	Host-Associated	15.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.91%
Plants	Host-Associated → Plants	15.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.98%
Loam	Environmental → Terrestrial → Soil → Loam	16.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.49%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23398591	3300000033	Soil	LPLSEELAAARRAGTALYHYALAAARHDDLTAAHLQAEVRTLVPEVILAAESGDPGADLATARQALQGLRAEQEQVRQRLEAMEQRLKEITSSPGGQR*
INPhiseqgaiiFebDRAFT_1007801562	3300000364	Soil	DKDWFTGEXLAAFYDTLEARLKXAPDPLVPLSDEVAAARRAGTALYHYALAAARHDDITAARLQAEVRELVPEVILAAESGDSGVSTAVARQTLQGLRAEQEQVRQRLEDMERRLXEXTSSPGXPR*
INPhiseqgaiiFebDRAFT_1007811351	3300000364	Soil	LPLSDEVVAARRAGTALYHYALAVARHDDMTAARLQAEVRELVPEVILAAESGDPGVSTAAARQALQGLRAEQEQVRQRLEDMERRLXEXTSSPGXPR*
JGI1027J11758_129922581	3300000789	Soil	YHYALAXARHDDLTAAXLQAEVRTLVPEVILAAESGDPGADLATARQALQGLRAEQEQVRQRLEAMEQRLQEITSSPGGQR*
JGI1027J11758_130023912	3300000789	Soil	MTAARLXAEVRELVPEVILAAESGDPGVSTAAARQELQELRAEQEQVRQRLEAMEQRLKAITSSPGGQR*
JGI1027J12803_1085974412	3300000955	Soil	YHHALAAARHDDMTAARLQAEVRELVPEVILAAESGDPGVSTAAARQALQGLRAEQEQVRQRLEDMERRLKEITSSPGGLR*
JGI10216J12902_1018683681	3300000956	Soil	LPLSEEVVAARRAGTALYHYALAVARHDDMTAARLQAEVRELVPEVILAAESGDPGVSTAAARQALQGLRAEQEQVRHRLEDMERRLNEITSSPGGPR*
JGI10216J12902_1138166913	3300000956	Soil	LSDEVAAARRAGTALYHYALAAARHDDMTAARLQAEVRELVPEVILAAESGGPGVSTAAARQELQGLRAEQEQVRQRLENMERRLKEITSSPGAPR*
F14TB_1006517362	3300001431	Soil	EFLAPRLTRMTAAGDKDWFTGESLAAFYDTLETRLRGVPDPLLPLSDEIVAARRAGTALYHYALAAARHDDLTAARLQAEVRELVPEVILAAESGDPGVSTAAARQALQGLRAEQEQVRHRLEDMERRLNEITSSPGGLR*
Ga0066395_106021232	3300004633	Tropical Forest Soil	TAARWQAEVGDLVPDVILAAESGGSAANVGTTRQELQGLRVEQEQVRQRLEAMERRLKEITRSPEGVR*
Ga0066395_107747572	3300004633	Tropical Forest Soil	QGAPAPLLPLSDEVAAARRAGTTLYHYALAAARHDDLTAARLQAEVRDLVPEVLRAAESSDPGANTATARQELQGLRVEQEQVRQRLEAMEQRLKEITDSAGGRR*
Ga0066678_102697261	3300005181	Soil	ARLRGAPAPLLPLSDEVVAARHAGTALYHYALAAARHDELTAARLQAEVRELVPEVILAAESSAPGANTATARQELQGLRAEQEQVRQRLENMERRLKEITSSPGGQR*
Ga0066388_1008021081	3300005332	Tropical Forest Soil	AGIPDPLVPASEETTAARRAGTALYHYALAAAQHDDVTAARFQTEVRELVPEVILAAEAGSPKTSLAEAQQNLAGLRWEQEAVRRRLEDMEQRLRDLSEAGENTR*
Ga0066388_1035532082	3300005332	Tropical Forest Soil	RLTRMTTAGDKDWFIGEALAAFYDTLEARLLGAPDALLPLSNEMTAARRAGTALYHYALAAARHDDVTAARWQAEVRDLVPEVILAAESGVPETSVAAARQELQGLLVEQEQVRQRLEAMERRLREITSAPEGVR*
Ga0066388_1045436522	3300005332	Tropical Forest Soil	GAPAPLLPLSDEVAAARRAGTALSHYALAAARHDDLTAARLQAEVRDLVPEVILAAESGTPGADTVTARQELQGLRVEQEQVRQRLEAMERRLKEITDSAGGQR*
Ga0070688_1014329721	3300005365	Switchgrass Rhizosphere	LSDEVVAARRAGTALYHYALAAARHDDMAVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR*
Ga0070708_1012408881	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LAAARHDELTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRAEQEQVRQRLEDMERRLKEITSSPGGQR*
Ga0066689_106280791	3300005447	Soil	LAALYDTLEARLRGAPDPLLPLSDEVVAARHAGTALYHYALAAARHDELTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRAEQEQVRQRLENMERRLKEITSSPGGQR*
Ga0070706_1008425291	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LIEFLAPRLTRMTTTGDKDWFTGEALAAFYDTLEARLLGAPDALLPSSNEVAAARRAGIALYHYALAAARHDDVTAARWQAEVRDLVPEVILAAESGDPGTNLATARQELQGLRVEQEQVRQRLEAMERRLRELTSSPESVR*
Ga0070706_1020837341	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SDEVTAARRAGTALYHYALAAARHDDLTAARWQAEVRDLVPEVILAAESGDPGTNVAAARQELQGLRVEQEQVRQRLEAMERRLREITGAPEGVR*
Ga0070704_1011769532	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ILEARLRVAPDSLLPLSDEVVAARRAGTALYHYALAAARHDDMAVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR*
Ga0066704_106673102	3300005557	Soil	TLEARLRNAPVPLLPLSDEVMAARHAGTALYHYALAAARHDDMTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRAEQEQVRQRLENMERRLKEITSSPGGQR*
Ga0066905_1020950702	3300005713	Tropical Forest Soil	LLSLSNKIAAARRAGTALYHYALAAAQHDDVTAARWQAEVRDLVPDVILAAESGGSETNVGTTRQELQGLRVEQEQVRQRLEAMERRLREITSSPEGVR*
Ga0066905_1022203081	3300005713	Tropical Forest Soil	LAAARHDDLTAARLQAEVRDLVPEVILAAESGAPGVDTATARQELQGLRVEQEQVRQRLEAMERRLKEITDSAGGQR*
Ga0068861_1002451872	3300005719	Switchgrass Rhizosphere	NTDDHPRIEFLAPRLTRMTAAGDKDWFTGESLAAFYDILEARLRVAPDSLLPLSDEVVAARRAGTALYHYALAAARHDDMAVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR*
Ga0066903_1005117634	3300005764	Tropical Forest Soil	DDRPLIEFLAPRLTRMTAAGDKDWFIGEALVAFYDTLAARLLGAPDPLLPLSNEITAARRAGTALYHYALAAARHDDVTAARWQAEVRELVPEVILAAESGDPETNVAVARQELQGLRVEQEQVRQRLEAMERRLREITSSPEGVR*
Ga0066665_105889562	3300006796	Soil	GDKDWFTGETLAAFYDTLETRLAGIPDSLLPVSDETAAARRAGTALYHYALAAAQHDDVSAARFQTEVRELVPEVILAAEAGSPKTSLAEAQQDLVGLRREQEAVRHRLEDMERRLRELSGSGENTR*
Ga0066660_110029401	3300006800	Soil	NEIAAARRAGTALYHYALATARHDDVTAARWQAEVRDLVPDVILAAETADSGASVAAARQELQGLRVEQEQVRQRLEDMERRLKEITSSPGGQR*
Ga0075431_1001010655	3300006847	Populus Rhizosphere	WFTGESLAAFYDILEARLRVAPDALLPLPDEVVAARRAGTALYHYALAAARHDDMTAARLQAEVRELVPEVILAAESGDPEVSTAAARQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGPR*
Ga0075420_1016847422	3300006853	Populus Rhizosphere	SGDKDWFTGESLADFYDTLEARLRSAPDPLLPLSDEVVAARRAGTALYHHALAAARHDDMTAARLQAEVRELVPEVILAAESGDPGVSTAAARQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGPR*
Ga0075429_1012671402	3300006880	Populus Rhizosphere	AFYDTLEAHLRGTPDPLLPLSDETAAARRAGTALYHYALAAARRDDLTAARLQDEVRDLVPEVILAAESRDPGANTAAARQELQGLRAEQEQVRQRLETMEQRLKAIMSSPRGQR*
Ga0075424_1008154421	3300006904	Populus Rhizosphere	ITAARLQAEVRELVPEVILAAESGDSGVSTAAARQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR*
Ga0075419_113232131	3300006969	Populus Rhizosphere	TGESLAAFYDTLETRLRGVPDPLLPLSDEIVAARRAGTALYHYALAAARHDDMSAARLQAEVRALVPEVILAAESGDPGADTATARQELQGLRAEQEYVRQRLEAMEQRLKEITSSSERQR*
Ga0099791_101081621	3300007255	Vadose Zone Soil	TGESLAAFYDTLEARLRGAPDPVLLLSDEIAAARRAGTALYHYALAAARHDDLTAARLQAEVRDLVPEVILAAESDDPGANTTAARQELQGLRVEQEQVRQRLEAMERRLKEITSAPGGQR*
Ga0066710_1008635091	3300009012	Grasslands Soil	TRMTPSGDKDWFTGEALAAFYDSLEARLLGAPDPLLSLSNEIAAARRAGTALYHYALAAARHDDVTATRLQAEVRDLVPDVILAAELGDSGTNVAAARQELQGLRVEQEQVRQRLEAMERRLREITSSPEGMR
Ga0066710_1018672312	3300009012	Grasslands Soil	PVSDETSAARRAGTALYHYALAAARHDDVSAARFQTEVRELVPEVILAAEAGSPKTSLAEAQQDLVGLRREQEAVRHHLEDMERRLRELSGSGENTR
Ga0066710_1021680072	3300009012	Grasslands Soil	TRMTPSGDKDWFTGEALAAFYDSLEARLLGAPDPLLSLSNEIAAARRAGTALYHYALAAARHDDVTAARLQAEVRDLVPDVILAAESGDSGASVATARQELQGLRVEQEQVRQRLEAMERRLREITGAPEGLR
Ga0099828_103934651	3300009089	Vadose Zone Soil	VAAARRAGTALYHYALAAARHDDMTAARLQAEVRDLVPEVILAAESDDPAANTAAARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGRR*
Ga0099827_109211791	3300009090	Vadose Zone Soil	DTLETRLLGAPDPLLSLSNEIAAARRAGTALYHYALATARHDDVTAARWQAEVRDLVPDVILAAESGDPGTSVAAARQELQGLRVEQEQVRQRLEAMERRLREITGAPEGLR*
Ga0105245_125102092	3300009098	Miscanthus Rhizosphere	LLPLSDEVVAARRAGTALYHYALAAARHDDMAVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR*
Ga0099792_104900671	3300009143	Vadose Zone Soil	PLLPLSDESAAARRAGTALYHYALAAARHDDLTAARWQAEVRDLVPDVILAAESSDPGANTAAARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGRR*
Ga0114129_108882633	3300009147	Populus Rhizosphere	EVAAARRAGTALYHYALAAARHDDMTAARLQAEVRELVPEVILAAESGGPGVSTAAARQELQGLRAEQEQVRQRLENMERRLKEITSSPGGPR*
Ga0114129_134345391	3300009147	Populus Rhizosphere	ALYHYALATARHDDLTAARLQAEVRALVPEVILAAESGDPGASVAAARQALHGLRAEQEQVRQRLEAMEQRLREITDPPEGVR*
Ga0075423_103274561	3300009162	Populus Rhizosphere	IEFLAPRLTRMAAGDKDWFTGESLAAFYDILEARLRVAPDALLPLPDEVVAARRAGTALYHHALAAARHDDMTAARLQAEVRELVPEVILAAESGDPGVSTAAARQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGPR*
Ga0075423_104094731	3300009162	Populus Rhizosphere	DTLEARLRGVPDPLLPLSDEVAAARRAGTALYHYALAVARHDDMTAARWQAEVRALVPEVILAAESGDPGADTATARQELQGLRAEQEYVRQRLEAMEQRLKEITSSPGRQR*
Ga0126380_103350761	3300010043	Tropical Forest Soil	ESLAAFYDTLETRLRGVPDPLLPLSDEIAAARRAGTALYHYALAAARHDSMTAARLQAEVRDLVPEVILAAELDDPGANTAAARQELQGLRAEQEQVRQRLEAMEQRLKAITSSPGGQR*
Ga0126380_111898821	3300010043	Tropical Forest Soil	RAGTALSHYALATARHDDLTAARLQAEVRDLVPEVILAAESGDPGADTATARQELQGLRVEQEQVRQRLEAMERRLKEITDSAGGRR*
Ga0126380_119233272	3300010043	Tropical Forest Soil	ARRAGTALYHYALATARHDDLTAARLQAEVRALVPEVILTAESGDPEVSVAAARQALHGLRAEQEQVRQRLETMEQRLREITNSPEGVQ*
Ga0126384_112716352	3300010046	Tropical Forest Soil	HYALAAARHDDMTAARLQAEVRDLVPEVILAAESSDPGANTAAARQELQRLRVEQEQVRRRLEAMERRLREITDSPEDVR*
Ga0126382_107311062	3300010047	Tropical Forest Soil	PDPYWPASDEVAAARRAGTALYRYVLAVAQQDGAAAARLQSEVRRLVPEVILAAESQVPGAGLAEARETLVGLRAEQEQVHQRLEDMERRLREMRDAVEGPR*
Ga0134071_107457601	3300010336	Grasslands Soil	ARHDDVTATRLQAEVRDLVPDVILAAELGDSGTNVAAARQELQGLRVEQEQVRQRLEAMERRLREITSSPEGMR*
Ga0126370_122889581	3300010358	Tropical Forest Soil	RLTRMTAAGDKDWFTGESLAAFYDALESRLRGAPAPLLPLSDEVAAARRAGTALSHYALATARHDDLTAARLQAEVRDLVPEVILAAESGDHGTDTVIARQELQGLRVEQEQVRQRLEAMEQRLKEITDSAGGRR*
Ga0126370_123987922	3300010358	Tropical Forest Soil	YALAVARHDDMAAARLQAEVRALVPEVILAAESSPPGADTATARQELQGLRAEQEYVRQRLEAMEQRLKEITSSPGSQR*
Ga0126376_116795152	3300010359	Tropical Forest Soil	MLYAGDLSSVADLSTTALLNTDDHPLIEFLAPRLTRMTTTGDKDWFIGEALAAFYDTIEARLVDIPDPLLPSSNEMTAARRAGTALYHYALAAARHDDVTAARWQAEVRDLVPEVILAAESGVPETSVAAARQELQGLLVEQEQVRQRLEAMERRLREITSAPEGVR*
Ga0126376_131459921	3300010359	Tropical Forest Soil	ESLVAFCDTLETRLRDAPAPLLPLSDEVAAAHRAGTALSHYALAAARHDDLTAARLQAEVRDLVPEVILAAESGDPGADTATARQELQGLRVEQEQVRQRLEAMERRLKEITDSAGGRR*
Ga0126372_115337931	3300010360	Tropical Forest Soil	ARLRGAPAPLLPLSDEVAAAHRAGTALSHYALAAARHDDLTAARLQAEVRDLVPEVILAAESGDPGADTATARQELQGLRVEQEQVRQRLEAMERRLKEITDSAGGRR*
Ga0126372_115931042	3300010360	Tropical Forest Soil	DWFTGESLAAFYDTLEARLRGAPAPLLPLSDEVAAARRAGTALSHYALATARHDDLTAARLQAEVRNLVPEVILAAEAGDPGADTVTARQELQGLRVEQEQVRQRLEAMERRLKEITDSAGGRR*
Ga0126372_126060521	3300010360	Tropical Forest Soil	PRLTRMTTTGDKDWFTREALAAFYDTLDARLSGIPDPLLPLSDEIAAARRAGTALYHYALAAARHDDLTAARWQAEVRDLVPEVILAAESGAPEGKVAAARQELQGLRVEQEQVRQRLEAMERRLQEITGAPEGWR*
Ga0126377_103725123	3300010362	Tropical Forest Soil	TGEALASFYDMLETRLAGISDPLIPVSDETATARHAGTALYHYALAAARHDDVLAARFQAEVRALVPEVILAAEAGSPKTSLVEAQQDLAGLRKEQETVRHHLEDMERRLRELSGPGENTQ*
Ga0126377_104601991	3300010362	Tropical Forest Soil	DDRPLIEFLAPRLTRMTPGGDKDWFTGEALAAFYDTLETRLLGAPDPLLSLSNEIAAARRAGTALYHYALAAAQHDDVTAARWQAEVRDLVPDVILAAESGDSGTNVGTNRQELQGLRVEQEQVRQRLEAMERRLKEITSAPEGVR*
Ga0126377_105853132	3300010362	Tropical Forest Soil	RLIGTPDPFWPASDEVAAARRAGTALYRYVLAVAQQDDEPAGPFQTEVRRLVPEVILAAESQVPWADLAEARDALVGLRAEQEQVHQRLEDMERRLREMRDAVEGPR*
Ga0126379_135041492	3300010366	Tropical Forest Soil	KDTPDPLLPWSDEIAAARHAGTALYHYTLAAARHDDVTAARLQAEVGDLVPDVILAAESGGSAANVGTTRQELQGLRVEQEQVRQRLEAMERRLKEITSAPEGVR*
Ga0126383_123876111	3300010398	Tropical Forest Soil	NTDDRPLIEFLAPHLPRVTAAGDKDWFTGEALAAFYDTLETRLAGIPDPLVPASEETAAARRAGTALYHYALAADRHDDATAARFQTEVRELVPEVILAAEAGSPRADLAEAQQDLAGLRREQEAVRRRLEDMERRLRDLSEAGENTR*
Ga0134122_124514601	3300010400	Terrestrial Soil	HDDLTAARLQAEVSALVPEVILAAESGDPGANMTAARQELQGLRAEQEQVRQRLEAMERRLKEITSSSGGQR*
Ga0105246_114068131	3300011119	Miscanthus Rhizosphere	YALAAARHDDMAVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR*
Ga0137391_111147642	3300011270	Vadose Zone Soil	ALAAARHDDLTAARWQAEVRDLVPDVILAAESSDPGANTAAARQELQGLRVEQEQVRQRLEAMEQRLKAITASPGGRR*
Ga0137389_112981542	3300012096	Vadose Zone Soil	LLPASDETVAARRAGMALYHYALAAARHDDVIAARFQAEVRDLVPEVILAAEGGAPKTSLAEAQQDLAGLRREQEQVRRRLEDMERRLGELSGSRESAR*
Ga0137374_101731301	3300012204	Vadose Zone Soil	PFMPTSAETAAARRAGIALYHYALAAARHDDVLAARLQTEVRELVPEVILAAEAGSPTTSLADAQQNLAGLRREQETVRRRLEDMERRLGTLKNGEEDPQ*
Ga0137380_107039572	3300012206	Vadose Zone Soil	PDPLLPLSDEVVAARHAGTALYHYALAAARHDELTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGQR*
Ga0137377_113812811	3300012211	Vadose Zone Soil	ALATARHDDMTAARLQAEVRALVPEVILAAESGEPGASVAAARQALHGLRTEQEQVRQRLEAMEQRLREITSSPEGVQ*
Ga0137387_103602421	3300012349	Vadose Zone Soil	NEIAAARRAGTALYHYALAAARHDDVTATRLQAEVRDLVPDVILAAELGDSGTNVAAARQELQGLRVEQEQVRQRLEAMERRLKEITSSPEGVR*
Ga0137372_106531152	3300012350	Vadose Zone Soil	ALSHYALATARHDDTAAARLQAEVRALVPEVILAAESGDPGASVAAARQALHGLRAEQEQVRQRLEAMEQRLQEITSSPEGVR*
Ga0137386_109483622	3300012351	Vadose Zone Soil	GTALYHYALATARHDDMTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGQR*
Ga0137367_106713861	3300012353	Vadose Zone Soil	MPTSAETAAARRAGIALYHYALAAARHDDVLAARLQTEVRELVPEVILAAEAGSPTTSLADAQQNLAGLRREQETVRRRLEDMERRLGTLKNGEEDPQ*
Ga0137371_113329742	3300012356	Vadose Zone Soil	DRPLIEFLAPRLTRMTPSGDKDWFTGEALAVFYDILEARLLGAPDPLLSLSNEIAAARRAGTALYHYALAAARHDDVTATRLQAEVRDLVPDVILAAESGDSGASVATARQELQGLRVEQEQVRQRLEAMERRLREITSSPEGMR*
Ga0137384_109207402	3300012357	Vadose Zone Soil	PRLTRVTAVGDKDWFTGETLAAFYDTLETRLAGIPDPLLPVSDEIAAARRAGTALYHYALAAARHDDVSAARFQTEVRELVPEVILAAEAGSPKTSLAEAQQDLVGLRREQEAVRHHLEDMERRLRELSGSGENTQ*
Ga0137385_105614772	3300012359	Vadose Zone Soil	MTTTGDKDWFTGEPLAAFYDTLEARLRGAPDPLLPLSDEVVAARRAGTALYHYALAAARHDELTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGQR*
Ga0137375_110621891	3300012360	Vadose Zone Soil	LATARHDDMTAARLQAEVRALVPEVILAAESGDPGASIPAARQALHGLRTEQEQVRQRLEAMEQRLREITASPEGVQ*
Ga0137390_104993362	3300012363	Vadose Zone Soil	IEFLAPRLTRMTTAGDKDWFTGESLAAFYDTLEARLRGAPDPLLPLSDEVAAARRAGTALYHYALAAARHDDMTAARLQAEVRDLVPEVILAAESDDPAANTAAARQELQGLRVEQEQVRQRLEAMEQRLKAITASPGGRR*
Ga0137396_107495012	3300012918	Vadose Zone Soil	LAAARHDDLTAARLQAEVRDLVPEVILAAESDDPGANTTAARQELQGLRTEQEHVRQRLEAMEQRLKAITAAPGGRR*
Ga0137359_102805904	3300012923	Vadose Zone Soil	ALYHYVLAVAQQDDAAAARLQAEVRRLVPEVILAAESQVPWAGLAEAREALVGLRAEQEQVHQRLEEMERRLREMRDAMEGPQ*
Ga0137419_108051641	3300012925	Vadose Zone Soil	LRGAPDPVLLLSDEIAAARRAGTALYHYALAAARHDDLTAARLQAEVRDLVPEVILAAESDDPGANTTAARQELQGLRTEQEHVRQRLEAMEQRLKAITAAPGGRR*
Ga0137404_120494481	3300012929	Vadose Zone Soil	RMTTTGDKDWFTGEALAAFYDTLEARLMGAPDPLLPPSDEVSAARRSGTALYHYALATARHDDTTAARLQAEVRALVPEVILAAESGDPGASVAAARQALHGLHAEQEQVRQRLEAMEQRLREITDSPEGVR*
Ga0137407_113021632	3300012930	Vadose Zone Soil	FNTDDRPLIEFLAPRLTRITTAGDKDWFTGEALAVFYDTLETRLAGIPNPLLPESDETAAARRAGTALYHYALAAARHDDVIAARLQTKVRELVPEVILAAEAGSPKPSLAEALQDLAGLRREQEGVRRRLEDMERRLKELSGSEENTQ*
Ga0137410_101065873	3300012944	Vadose Zone Soil	YHYALAAARHDDLTAARWQAEVRDLVPDVILAAESSDPGANTAAARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGRR*
Ga0126375_103532171	3300012948	Tropical Forest Soil	SLAAFYDTLEARLRGAPIPLLPLSDEVAAARRAGTALSHYALATARHDDLTAARLQAEVRNLVPEVILAAEAGDPGADTVTARQELQGLRVEQEQVRQRLEAMERRLKEITDSAGGRR*
Ga0126369_121220052	3300012971	Tropical Forest Soil	APRLTRMTAAGDKDWFIGEALVAFYDTLAARLLGAPDPLLPLSNEITAARRAGTALYHYALAAARHDDVTAARWQAEVRELVPEVILAAESGDPETNVAVARQELQGLRVEQEQVRQRLEAMERRLREITSSPEGVR*
Ga0173478_106516152	3300015201	Soil	TRMTAAGDKDWFTGESLAAFYDILEARLRVAPDSLLPLSDEVVAARRAGTALYHYALAAARHDDMTVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR*
Ga0132255_1061683232	3300015374	Arabidopsis Rhizosphere	EVVVARRAGTALYHYALATARHDGLTAARLQAEVRTLVPEVILAAESSAPGADLATARQALQGLRAEQEQVRQRLEAMEQRLKEITTAPGGQR*
Ga0182036_106835852	3300016270	Soil	AAARHDDLTAARLQAEVRDLVPEVMLAAESGDHGADTVIARQELQGLRVEQEQVRQRLEDMERRLQEITDSAGGRR
Ga0066655_108414091	3300018431	Grasslands Soil	IDVLALRLARVTEVGDNALCTRERRAAFDLALQAGVERVPGPLLPVFDETAAAGRAGTALYHYALAAAGQDDVIPARFQTEVRGLVPEVILAAEAGSPKTSLAEAQQGLVGLRREQEAVRHRLEDMERRLRELSGSGENTQ
Ga0066667_106379612	3300018433	Grasslands Soil	EARLRGAPAPLLPLSDEVVAARHAGTALYHYALAAARHDELTAARLQAEVRELVPEVILAAESGDPGANTATARQELQGLRAEQEQVRQRLENMERRLKEITSSPGGQR
Ga0066662_126604291	3300018468	Grasslands Soil	HDDLTAARLQAEVRELVPEVILAAESGDPGTNVAAARQELQGLRIEQEQVRQRLEAMERRLREITSAPEGVR
Ga0207684_106938131	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	DTLDARLLGAPDPLLPLSDEVAAAHRAGTALYHYALAAARHDDITAARWQAEVRDLVPEVILAAESGDPGTNVAAARQALQGLRVEQEQVRQRLEAMEQRLREITGAPEGVR
Ga0207684_113637941	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LLGAPDALLPSSNEVAAARRAGIALYHYALAAARHDDVTAARWQAEVRDLVPEVILAAESGDPGTNLATARQELQGLRVEQEQVRQRLEAMERRLRELTSSPESVR
Ga0207687_116877952	3300025927	Miscanthus Rhizosphere	AARRAGTALYHYALAAARHDDMAVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR
Ga0207712_109804662	3300025961	Switchgrass Rhizosphere	FYDTLETRLRGVPDPLLPLSDEIVAARRAGTALYHYALAAARHDDLTAARLQAEVRTLVPEVILAAESSDPGADLATARQALQGLRAEQEQVRQRLEAMEQHLKEITSSPGGQR
Ga0207708_114920392	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DDMAVARLQAEVRELVPEVILAAESGDPGVSPAVTRQALQGLRAEQEQVRQRLEDMERRLQEITSSPGGSR
Ga0209465_104242492	3300027874	Tropical Forest Soil	LTAARLQAEVRDLVPEVLRAAESSDPGANTATARQELQGLRVEQEQVRQRLEAMEQRLKEITDSAGGRR
Ga0209481_105931262	3300027880	Populus Rhizosphere	RLLGAHDSLLPLSNEIAGARRAGTALYHYALAAARHDDMSAARLQAEVRALVPEVILAAESGDPGADTATARQELQGLRAEQEYVRQRLEAMEQRLKEITSSSERQR
Ga0209590_107604892	3300027882	Vadose Zone Soil	SDETVAARRAGTSLYHYALAAARHDDVAAARFQAEVRDLVPEVILAAEGGAPKTSLAEAQQDLAGLRREQEQVRRRLEDMERRLGELSGSGENTQ
Ga0209488_104592551	3300027903	Vadose Zone Soil	ESLAAFYDTLAARLRGAPDPLLPLSDESAAARRAGTALYHYALAAARHDDLTAARWQAEVRDLVPDVILAAESSDPGANTAAARQELQGLRVEQEQVRQRLEAMERRLKEITSSPGGRR
Ga0307278_102212501	3300028878	Soil	LAVAQQDDAAAARLQAEVRRLVPEVILAAESQVPWAGLAEAREALVGLRAEQEQVHQRLEEMERRLREMRDSMEGPR
Ga0310912_111685162	3300031941	Soil	LSDEVAAARRAGTALYHYALAAARHDDMTAARLQAEVRELVPEVILAAESGGPGVSTAAARQELQGLRAEQEQVRQRLENMERRLKEITSSPGGPR
Ga0310909_111801802	3300031947	Soil	AAFYTTLEERLRGIPDPLLPLSDEVVMARRAGTALAQYALAVARHDEKTAAQLQAEVRALVPDVILAAESGDPGVCPATARQELQGLRVEQEQVRQRLEDMERRLKELTSAPGGPR
Ga0335084_124044062	3300033004	Soil	EVAHARRAGTALYQYALASARRDDATAARFQSEVRDLVPEVIAAAEAGNPQANLLDARHELAGLRVEQAEVHRRLQDMEQRLQALDRSVEEHE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094558

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences