Metagenome Family F094603

Basic Information
Family ID	F094603
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	51 residues
Representative Sequence	MKANKALKRLAKIEALMSDVTERYSSAPHIREVLQDAKAAVTRAKEA
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (12.264 % of family members)
Environment Ontology (ENVO)	Unclassified (34.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.962 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.67% β-sheet: 0.00% Coil/Unstructured: 45.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF04203	Sortase	14.15
PF01910	Thiamine_BP	4.72
PF01804	Penicil_amidase	3.77
PF00092	VWA	2.83
PF08238	Sel1	1.89
PF11154	DUF2934	1.89
PF07929	PRiA4_ORF3	1.89
PF05977	MFS_3	0.94
PF13701	DDE_Tnp_1_4	0.94
PF00665	rve	0.94
PF00589	Phage_integrase	0.94
PF04366	Ysc84	0.94
PF02899	Phage_int_SAM_1	0.94
PF03109	ABC1	0.94
PF01545	Cation_efflux	0.94
PF03949	Malic_M	0.94
PF13495	Phage_int_SAM_4	0.94
PF00561	Abhydrolase_1	0.94
PF02581	TMP-TENI	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	14.15
COG0011	Thiamin-binding stress-response protein YqgV, UPF0045 family	Coenzyme transport and metabolism [H]	4.72
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.77
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.94
COG0281	Malic enzyme	Energy production and conversion [C]	0.94
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.94
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.94
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.94
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.94
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.94
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.94
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.94
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.94
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.94
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.94
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.94
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.94
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.94

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.42%
Host-Associated	Host-Associated	23.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.49%
Plants	Host-Associated → Plants	23.58%
Aquatic	Environmental → Aquatic	17.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.72%
Freshwater	Environmental → Aquatic → Freshwater	16.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.60%
Peat	Environmental → Terrestrial → Peat	3.77%
Sediment	Environmental → Aquatic → Sediment	1.89%
Roots	Host-Associated → Plants → Roots	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.15%
Loam	Environmental → Terrestrial → Soil → Loam	8.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.89%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.26%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	9.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.66%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.94%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B_all_v_01629360	2140918024	Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAK
JGI12270J11330_101249553	3300000567	Peatlands Soil	VKANKALKRLAKIEALISDVAERYSSGGFHVREALKDAKAALARLKEA
JGI24129J20441_10601141	3300001870	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAKEAVSLRTSSGTAKN
C688J35102_1201333781	3300002568	Soil	MKSKKVLKRIAKIEALISKVTERSSQSAPHVRELLRDAKAAVIRAKEAVQASSV
Ga0062593_1030577252	3300004114	Soil	VKAKKVLRRLAKIDALISEVTDRCSKSAVQIQQSLQGAKAAFGRVKKAVN
Ga0070666_109971201	3300005335	Switchgrass Rhizosphere	MKAKKVLKRISKIEALMSKVTQGSSPQIRELLRDAKAAVIRTREAVQASSETAANPPS
Ga0070666_110884721	3300005335	Switchgrass Rhizosphere	MKAKKVLKRLANIEALISKVTERSSASTPHIRQLLQDAKAAVIRAKEA
Ga0070709_112783582	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLAKIEALMSGVTKRYSANAPNLRRVLQDALDAVARAKGAVSLQASSGTKAGTAKAHQAVKKAT
Ga0070708_1006472401	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQ
Ga0070707_1011062461	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKAKKALKRLAKIEALMSDVTERYSAGAPHIREALRDAKAAVTRAKDALGVQASSK
Ga0070698_1015782072	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQT
Ga0070684_1002429811	3300005535	Corn Rhizosphere	MKANKALKRLTKIEALMSKVRDQFSANAPTLENVFQQATAAIARAKEAVGLQVSSKAKAR
Ga0070732_108220281	3300005542	Surface Soil	MKANKALKRLAKIEALLSDVMGRYSANPPEVREAFQDAKTAVARAKNAVSSQASS
Ga0070664_1020278211	3300005564	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAM
Ga0068852_1019100011	3300005616	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQ
Ga0068852_1022504422	3300005616	Corn Rhizosphere	MKANKALKRMAKIESLTSDMMRRLAKGAPHLSEVLQDLKG
Ga0068859_1026518772	3300005617	Switchgrass Rhizosphere	MKANKALKRLAKIEALMSDVTERYSARGPDTRKLLQDAEAAVVRAK
Ga0070764_109754661	3300005712	Soil	MKSNKALKRLTHVEELLADVTERYSADASHVREALQAAKLAVTRAKD
Ga0068860_1007216143	3300005843	Switchgrass Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAAMLSVKEA
Ga0080027_102426011	3300005993	Prmafrost Soil	MKANKALKRLAKIEALVSDVTERYLASAPHIQEALHDAKAAVTRAKEAVSLHASS
Ga0075017_1013573242	3300006059	Watersheds	MKVRKALKRLAKIEALLSDVTERYSSSALPLREALRDAKAALARVKEAVSSQASLGKAK
Ga0075030_1015336361	3300006162	Watersheds	MKANKVLKRLAKIEALVSDVAQKFSAGAPQVSGVLK
Ga0068871_1007090882	3300006358	Miscanthus Rhizosphere	MKANKALKRLAKIEALMSDVTERYSARGPDTRKLLQDAEAAVVRAKAAVNLEA
Ga0075434_1011599233	3300006871	Populus Rhizosphere	MKAKKVLKRIAKIEALILEVSERSSPSAPQIQELLREAKNAISRA
Ga0066793_104843412	3300009029	Prmafrost Soil	MVMKANKALKRLAKIEALMSDVTERYSASAPDLRKVLQDAKAAVARAKEAVGLQGSSGKK
Ga0099829_116218661	3300009038	Vadose Zone Soil	MKAKKALKRLTKIESLMSDVTKRYSASAPHVRGALQDAQ
Ga0105240_115848662	3300009093	Corn Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAA
Ga0099792_102649241	3300009143	Vadose Zone Soil	MKANKALKRLAKIEVLMSDVAKRFSAHAPSLREAFADLKTAVDRVKEAVGVQVTSAAGKKKAA
Ga0105243_102054003	3300009148	Miscanthus Rhizosphere	MKANKALKRLAKIEALMSDVADRFSASAPHLREALKDLKAAVASVKE
Ga0105241_125079651	3300009174	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAMLSVREAVKVQASPAAKKAAPKKAARTGKK
Ga0116221_14428961	3300009523	Peatlands Soil	VVVKANKALKRLAKIEALISDVAERYSSGGFHVREAL
Ga0105238_100599851	3300009551	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSSA
Ga0105238_121499071	3300009551	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSSA
Ga0116127_10211864	3300009618	Peatland	MKAKKALKRLAKIEALISDVTERYSSAPHMREVLQ
Ga0116121_13100551	3300009644	Peatland	MKANKALKRLAKIEALISDLMERYSASAPHIREVLQDAKAAVTRAKEAVSLQASSG
Ga0105856_13267052	3300009662	Permafrost Soil	MKANKALKRLARIEASLTAVTKRYSAGTPHIREALDDAQAA
Ga0116224_104881472	3300009683	Peatlands Soil	MIMKANKALKRLAKIEESVSEVMERYSATAPHIREALQDAKAAVTRAKEVVSLQASSGTTNAPKKA
Ga0116217_105434051	3300009700	Peatlands Soil	MKANKALKRLAKIEALMSGVTERYSASAPHLRKLLQEAEEAFAR
Ga0134128_116033021	3300010373	Terrestrial Soil	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVTEAVKVQTSSSAAPKKASSKKTSSKKA
Ga0137392_114878171	3300011269	Vadose Zone Soil	MKVNKALKRLAKIEALMLGVTERYLPSAPHIREVLQNAKAA
Ga0137389_104540103	3300012096	Vadose Zone Soil	MKANKALKRLAKIEALISDVTERYSASAPHVRDVLQDAKAAVARAKEAVRLRASAGKPK
Ga0137376_101418721	3300012208	Vadose Zone Soil	MKPNKVLKRLAKIEALVSDLAKRFRPSAPRVREVLQDAKGAVIRAKETVL
Ga0137369_105730981	3300012355	Vadose Zone Soil	MRANKAQKRLTKIEALMSGVAERYSPGAPDIREVLQ
Ga0181518_100863704	3300014156	Bog	MKANKALKRLAKIEALISDVAERYSSSALHIREALRDAKAAFARVKEAVSSQASSETAK
Ga0181526_100524205	3300014200	Bog	MVMKANKALKRLAKIEESVSDVMERYSASAPHIREALQDAKAAVTRAKEAVSSQASSGTTNAPQKAATKK
Ga0163163_100882341	3300014325	Switchgrass Rhizosphere	MKANKALKRLAKIEALMSDVADRFSASAPHLREALKDLKAAVASVKEAVKVQAS
Ga0182014_103727353	3300014491	Bog	MKTNKALKRLAKIEASISNMTERYSSAPHIRETLQDAKA
Ga0182011_103251171	3300014496	Fen	MKANKAVKRLAKIEALMSDVMERYSAGAPDIREMLQDAKA
Ga0182024_102510601	3300014501	Permafrost	MKANKAVKRLAKIEASMSDVIERYSASTPHLREVLQDAKAAVTRAKEAVSLQASSGT
Ga0182021_132450882	3300014502	Fen	MKAIKALKRLTKAEALLSNVIERYVASGHSIQEVLQDAKASVIRAKDAVGLQASPRKSKKPSVKAGR
Ga0182030_100821145	3300014838	Bog	MKANKALKRLTKIEELIADVTERYSTSALHIRAALVGAKLAVARLKA*
Ga0182027_102962071	3300014839	Fen	MKANKALKRLAKIEALMSDVTERYSASAPDIREMLQDAKAAVTRAKEAVS
Ga0187856_10507251	3300017925	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAVTRA
Ga0187856_10651793	3300017925	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAVTRA
Ga0187849_12796142	3300017929	Peatland	MKANKALKRLAKVEALMSDVTERYSASAPHIREVLQDAKAAVTRAKEA
Ga0187891_10151248	3300017996	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIREVLQHA
Ga0187891_10352653	3300017996	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHA
Ga0187868_10248493	3300018002	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHAK
Ga0187868_11520783	3300018002	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAVTRAK
Ga0187884_1000724810	3300018009	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAV
Ga0187860_12583762	3300018014	Peatland	MKATKALKRLAKIEALISDVMERYSSSALHIREALQDAKAAFVRVKEAVSSQASSGTAKKKA
Ga0187866_12323391	3300018015	Peatland	MKANKALKRLAKIEALMSDVTERYSASAPDVQEALQDAKAAVTRAKEAVSLQA
Ga0187889_101320111	3300018023	Peatland	MKAKKALKRLAKIEALISDVTERYSSAPHMREVLQDAKAAVTRAKEA
Ga0187885_102906863	3300018025	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQDA
Ga0187890_100458025	3300018044	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIRELLQHAKAGITRAKEAVGLQASSETA
Ga0210406_104985631	3300021168	Soil	MKAKKVLKRIAKIEALISEVTERSSLSAPHIQELLREAKTAIARAKKAVSSQ
Ga0208716_11162151	3300025548	Arctic Peat Soil	MKTDKALKRLAKIEVLISDMTERYSSALHIRETLQD
Ga0207926_11319231	3300025619	Arctic Peat Soil	MKANRVLKRLAKIEALILKVTERSSASAPHIRELLQDAKAAVTRAKEAVSLQASS
Ga0209538_11693861	3300025846	Arctic Peat Soil	MKTNKALKRLAKIEASISDMTERYSSALHIRETLQDAKAAVTRAKEAVSLQ
Ga0209176_100831002	3300025854	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAK
Ga0209429_102098282	3300025864	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAKEAVSLQA
Ga0209226_102222571	3300025865	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAKEAVSLQASSGTAKNPPMK
Ga0209226_102724961	3300025865	Arctic Peat Soil	MKTNKALKRLAKIEASISDMTERYSSALHIRETLQDAKAAVTRAKEAVSLQKS
Ga0209585_100256761	3300025891	Arctic Peat Soil	MVMKANKALKRLAKIEALMSDVTERYSASAPHVQE
Ga0209585_100883823	3300025891	Arctic Peat Soil	MKANKALKRLAKIEALMSDVVERYSASAPHVRELLQDAKAAVTRAKEAVSLRSSSGTAKN
Ga0207710_102812842	3300025900	Switchgrass Rhizosphere	MKTKKILKRIVKIEALMSEVTERSSASAPHIRELLRDAKAAVIRAKKAVQA
Ga0207657_101716923	3300025919	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVL
Ga0207694_111932861	3300025924	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQASPAAKKAEPKKAARAGKKAVAKKRAPL
Ga0207700_102640454	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLTKIEALMSRVRDQYSASAPKLESVLQQATAAIARAKEAVTLEVSSRTK
Ga0207664_112559921	3300025929	Agricultural Soil	MKAKRVLKRIAKIEALISKVTERSSGGAPNIRELLRDAKTAVIRAKEALRASFGKA
Ga0207709_106419322	3300025935	Miscanthus Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAAMLSVKEAAKVQASPAAKKAAPKK
Ga0207679_120691981	3300025945	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQASPAAKK
Ga0207639_104246121	3300026041	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSAAAPKKASSKKTSSKKA
Ga0207676_118252481	3300026095	Switchgrass Rhizosphere	MKTKKILKRIVKIEALMSEVTERSSASAPHIRELLRDAKAAVIRAKKAVQAS
Ga0209848_10036824	3300026221	Permafrost Soil	MKANKALKRLAKIEALVSDVTERYLASAPHIQEALHDAKAAVTRAKEA
Ga0209908_100437602	3300027745	Thawing Permafrost	MKANKAVKRLAKIEASMSDVIERYSASTPHLREVLQDAKAAVTRAKEAVSLQASSGTAENPPV
Ga0209415_109922412	3300027905	Peatlands Soil	MKANKALKRLAKIEESVSEVMERYSATAPHIREALQDAKAAVTRAKE
Ga0209168_106395032	3300027986	Surface Soil	MKANKALKRLAKIEALMSDVMERYSASTPNVRDVLQDAKAAVARAKEALSLQASSGTSKKSAPIKKG
Ga0268264_106231771	3300028381	Switchgrass Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAAMLSVKEAARV
Ga0246001_10265651	3300029889	Peat	MKANKALKRLAKIEALMSDVTERYSASAPDVQEALQDAKAAVTRAKEAVSLQASSGTATNPPAKHSK
Ga0311350_117593822	3300030002	Fen	MKANKALRRLAKIEELISDVTERYSTSASQIRNVLQDAKAAVVRAKEAVQAASGMAKQFP
Ga0170823_114526963	3300031128	Forest Soil	MKANKALKRLAKIEALISDVTERYSASAPHVRDVL
Ga0170824_1028494062	3300031231	Forest Soil	MKKNKALKRLAKIEAMMSDVAKRFSAHAPTLRDAFADLKTAVGRVKEAVGVQAASAAAKKKAASG
Ga0170824_1098954781	3300031231	Forest Soil	MKANKALKRLAKVEALVRDATERYSARVPHIREMLNDAKAAVTRAKEAIGLH
Ga0170824_1152932491	3300031231	Forest Soil	MKANKVLKRIAKIEALMSKVMERSSASEPHIRELLRDAKAAITRAKKAVSLQAFSETAKK
Ga0265316_106660461	3300031344	Rhizosphere	MKTKKALKRLARIVELMSDVAERYSVAPEIRETLQDAKAAV
Ga0170820_176068902	3300031446	Forest Soil	MKKNKALKRLAKIEAMMSDVAKRFSAHAPTLRDAFADLKTAVGRVKEAVGVQAASAAAKK
Ga0265313_102343121	3300031595	Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSSTASAKK
Ga0307469_120469032	3300031720	Hardwood Forest Soil	MKANKALKRLAKIEASMSDVAARYSASEPHTQEVLQE
Ga0311301_112353661	3300032160	Peatlands Soil	MKANKALKRLAKIEALISDVTERYSKGARQIREALQDAKAAFARVKAAVSSQASSRTAKS
Ga0335078_122336592	3300032805	Soil	MKTNKALKRIAKIEALISDVTERYSSSAFHIREALQEAKAAFARVKDAVSSQ
Ga0335081_108180901	3300032892	Soil	MKANKALKRLAKIEELMSDVVERYSGSAPHIRALLQDAKAAVIR
Ga0326727_106871683	3300033405	Peat Soil	MKANKAVKRLAKIEASMSDVMERYSAGAPDVREALQNAKAAVTRAK
Ga0316624_105503871	3300033486	Soil	MKAKKALKRLAKIEALISDVTERVSKGSLQIQEALQDAKAAFGRVKEAVS
Ga0316624_120573402	3300033486	Soil	MKANKALKRLNKIEALISRLTERVSAGSPHIREMLGDVKAAVIR
Ga0371488_0177278_953_1093	3300033983	Peat Soil	MKANKALKRLAKIEALMSDVTERYSSAPHIREVLQDAKAAVTRAKEA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094603

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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