Metagenome / Metatranscriptome Family F094684

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094684
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	104 residues
Representative Sequence	MTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.43 %
% of genes near scaffold ends (potentially truncated)	78.10 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.143 % of family members)
Environment Ontology (ENVO)	Unclassified (30.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.69% Coil/Unstructured: 52.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01717	Meth_synt_2	7.62
PF04115	Ureidogly_lyase	3.81
PF07883	Cupin_2	2.86
PF00496	SBP_bac_5	0.95
PF00149	Metallophos	0.95
PF01630	Glyco_hydro_56	0.95
PF01384	PHO4	0.95
PF02775	TPP_enzyme_C	0.95
PF05443	ROS_MUCR	0.95
PF01609	DDE_Tnp_1	0.95
PF09821	AAA_assoc_C	0.95
PF12840	HTH_20	0.95
PF03972	MmgE_PrpD	0.95
PF12850	Metallophos_2	0.95
PF07813	LTXXQ	0.95
PF07690	MFS_1	0.95
PF00723	Glyco_hydro_15	0.95
PF13924	Lipocalin_5	0.95
PF02515	CoA_transf_3	0.95
PF03786	UxuA	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	7.62
COG3194	Ureidoglycolate hydrolase (allantoin degradation)	Nucleotide transport and metabolism [F]	3.81
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.81
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.95
COG1312	D-mannonate dehydratase	Carbohydrate transport and metabolism [G]	0.95
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.95
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.95
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.95
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.95
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.95
COG4957	Predicted transcriptional regulator	Transcription [K]	0.95
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.95
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.95
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.57 %
Unclassified	root	N/A	5.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.90 %
Unclassified	root	N/A	5.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	77.14 %
Unclassified	root	N/A	5.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.90 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.14 %
Unclassified	root	N/A	5.71 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.95 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.95 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.95 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.14 %
Unclassified	root	N/A	5.71 %
Trinickia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia	0.95 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.95 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.95 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.95 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.14 %
Unclassified	root	N/A	5.71 %
Trinickia symbiotica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia → Trinickia symbiotica	0.95 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.95 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.95 %
Achromobacter xylosoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	0.95 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.14 %
Unclassified	root	N/A	5.71 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.95 %
Taibaiella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Taibaiella	0.95 %
Trinickia symbiotica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia → Trinickia symbiotica	0.95 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.95 %
Achromobacter xylosoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.14 %
Unclassified	root	N/A	5.71 %
Taibaiella soli	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Taibaiella → Taibaiella soli	0.95 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.95 %
Trinickia symbiotica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia → Trinickia symbiotica	0.95 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.95 %
Achromobacter xylosoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100137850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2304	Open in IMG/M
3300004092\|Ga0062389_104064688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	550	Open in IMG/M
3300005434\|Ga0070709_11392304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300005435\|Ga0070714_101978659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300005436\|Ga0070713_101944824	Not Available	570	Open in IMG/M
3300005437\|Ga0070710_10284232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1074	Open in IMG/M
3300005439\|Ga0070711_100095418	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300005439\|Ga0070711_100594352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300005439\|Ga0070711_101249449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300005561\|Ga0066699_10061269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Trinickia → Trinickia symbiotica	2356	Open in IMG/M
3300005575\|Ga0066702_10080997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1816	Open in IMG/M
3300005576\|Ga0066708_10615185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300005610\|Ga0070763_10129718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1299	Open in IMG/M
3300005764\|Ga0066903_106205606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300005764\|Ga0066903_108686331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300005921\|Ga0070766_10062115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2128	Open in IMG/M
3300010360\|Ga0126372_10831174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300010361\|Ga0126378_10737127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1096	Open in IMG/M
3300010361\|Ga0126378_11439599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300010366\|Ga0126379_11007409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300010379\|Ga0136449_100680201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1731	Open in IMG/M
3300010379\|Ga0136449_100903838	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300011120\|Ga0150983_10668685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300012958\|Ga0164299_10276973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300012971\|Ga0126369_12004564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300012971\|Ga0126369_13383389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300015242\|Ga0137412_10456988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300016371\|Ga0182034_10520626	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300018431\|Ga0066655_10682863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300020579\|Ga0210407_10187725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1603	Open in IMG/M
3300020581\|Ga0210399_10816801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300020582\|Ga0210395_10989176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300020582\|Ga0210395_11412776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300020583\|Ga0210401_10908327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300021088\|Ga0210404_10066083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1745	Open in IMG/M
3300021171\|Ga0210405_10135962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1944	Open in IMG/M
3300021171\|Ga0210405_10764075	Not Available	743	Open in IMG/M
3300021358\|Ga0213873_10100334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300021384\|Ga0213876_10336244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300021401\|Ga0210393_10083926	All Organisms → cellular organisms → Bacteria → Proteobacteria	2526	Open in IMG/M
3300021403\|Ga0210397_10667606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	797	Open in IMG/M
3300021405\|Ga0210387_11339467	Not Available	618	Open in IMG/M
3300021407\|Ga0210383_11372980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300021420\|Ga0210394_11690765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300021432\|Ga0210384_10913137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300021441\|Ga0213871_10040271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300021474\|Ga0210390_11020184	Not Available	675	Open in IMG/M
3300021560\|Ga0126371_10317586	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300021560\|Ga0126371_10837479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300022522\|Ga0242659_1067937	All Organisms → cellular organisms → Bacteria → Proteobacteria	659	Open in IMG/M
3300022714\|Ga0242671_1104453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300025898\|Ga0207692_10249299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1063	Open in IMG/M
3300025898\|Ga0207692_11083861	Not Available	530	Open in IMG/M
3300025916\|Ga0207663_11563138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300025928\|Ga0207700_11789686	Not Available	540	Open in IMG/M
3300025929\|Ga0207664_10522106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300025929\|Ga0207664_11322325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300027070\|Ga0208365_1002529	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300027076\|Ga0208860_1019055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300027537\|Ga0209419_1113200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300027610\|Ga0209528_1124407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300027680\|Ga0207826_1181078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300027698\|Ga0209446_1107602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300027768\|Ga0209772_10154910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300027824\|Ga0209040_10327980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300027903\|Ga0209488_10345202	All Organisms → cellular organisms → Bacteria → Proteobacteria	1107	Open in IMG/M
3300028047\|Ga0209526_10299692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter → Achromobacter xylosoxidans	1088	Open in IMG/M
3300029636\|Ga0222749_10706492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300030848\|Ga0075388_11471793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031446\|Ga0170820_10134599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300031474\|Ga0170818_104379924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300031573\|Ga0310915_10337745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1067	Open in IMG/M
3300031682\|Ga0318560_10743407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300031708\|Ga0310686_106386537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300031719\|Ga0306917_10675652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300031719\|Ga0306917_11011617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300031724\|Ga0318500_10427685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300031744\|Ga0306918_10051941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2726	Open in IMG/M
3300031744\|Ga0306918_10909674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300031754\|Ga0307475_10093873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2332	Open in IMG/M
3300031768\|Ga0318509_10547461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300031770\|Ga0318521_10333576	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300031771\|Ga0318546_10994800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300031782\|Ga0318552_10733011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031795\|Ga0318557_10302993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	733	Open in IMG/M
3300031832\|Ga0318499_10388479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031879\|Ga0306919_10265245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1296	Open in IMG/M
3300031879\|Ga0306919_10849213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031890\|Ga0306925_10612028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1149	Open in IMG/M
3300031912\|Ga0306921_10696452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1168	Open in IMG/M
3300031941\|Ga0310912_10572057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300031945\|Ga0310913_10774242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300031946\|Ga0310910_11033771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300031954\|Ga0306926_12654233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300031959\|Ga0318530_10163595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300032001\|Ga0306922_10133123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2650	Open in IMG/M
3300032025\|Ga0318507_10348394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300032043\|Ga0318556_10407949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300032052\|Ga0318506_10527755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300032054\|Ga0318570_10516950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300032068\|Ga0318553_10589922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300032076\|Ga0306924_10585587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1264	Open in IMG/M
3300032091\|Ga0318577_10604365	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Taibaiella → Taibaiella soli	521	Open in IMG/M
3300032955\|Ga0335076_10612741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300033290\|Ga0318519_10674702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Host-Associated	Host-Associated	2.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.33%
Aquatic	Environmental → Aquatic	3.81%
Plants	Host-Associated → Plants	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.33%
Freshwater	Environmental → Aquatic → Freshwater	3.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.90%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.57%
Loam	Environmental → Terrestrial → Soil → Loam	23.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001378501	3300002245	Forest Soil	MNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS*
Ga0062389_1040646881	3300004092	Bog Forest Soil	IPPIPAGKARLWIYRVYLPSETLNMTRVSMNGVYAGYAQLGGAFYRDVQPGVYHITVESYGRDFNQSTNVALVTGQEAFVEIESLRSWATIYGIGFGAGRDTFYARLIFPQIARAEIAQSIFYGGG*
Ga0070709_113923041	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTKVSMNGTYAGYAQLGGAFYRDVTPGMYHIEVESYGRDINQSADVALVAGQEAYVRVEPLRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS*
Ga0070714_1019786592	3300005435	Agricultural Soil	MNGTYAGYAQLGGAFYRDVTPGMYHIEVESYGRDINQSADVALVAGQEAYVRVEPLRSWATGYGNRGMAGRDTFYARLILPQTARAEIMQSFFDGGS*
Ga0070713_1019448241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNGTYAGYAQLGGAFYRDVTPGVYQIEVESYGRGINQSSDVALVAGQEAYVRVEPLRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS*
Ga0070710_102842322	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AFYRDVTPGVYQIEVESYGRDINQSADVALVAEQEAYIRVEPLRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS*
Ga0070711_1000954181	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PPIPAGEARLWVYRLYIPSETLNMTKVSMNGTYAGYAQLGGAFYRDVTPGVYQIEVESYGRDINQSADVALVAEQEAYIRVEPLRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS*
Ga0070711_1005943521	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS*
Ga0070711_1012494491	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SVPPIPAGEARLWVYRLYIPSETLNMTKVSMNGTYAGYAQLGGAFYRDVTPGVYHIEVESYGRDINQSADVALVAGQEAYVRVEPLRSWATGYGNRGMAGRDTFYARLILPQTARAEIMQSFFDGGS*
Ga0066699_100612691	3300005561	Soil	SIGGAYAGYAQLGGAFYRDVPPGVYHVEVESYGRDFNQSTNVALVAGQEAYIRVESLRSWATNYGIGTTVGRDTFYARLIFPQIARAEIAQSFFDGGN*
Ga0066702_100809972	3300005575	Soil	MNGAYAGYAQLGGAFYRDVPPGTYHIEVESYGRDFNQSTNVALVAGQELYIKVESLRSWATDHGQGRTVGRDTFYARLILPQIARTEIVQSFFDGGS*
Ga0066708_106151851	3300005576	Soil	FYRDVPPGTYHIEVESYGRDFNQSTNVALVAGQELYIKVESLRSWATDHGQGRTVGRDTFYARLILPQIARTEIVQSFFDGGS*
Ga0070763_101297183	3300005610	Soil	GEARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDTWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0066903_1062056061	3300005764	Tropical Forest Soil	LWFYRLYDPSETLNMTEILMNGAYAGYAQLGGAFYRNVPPGVYHIEVESYGRDVDQSTNVALAAGQEAYVRVESLRSWATNYGIGTTIGRDTFYARLILPQTARTEIAQSFFDGGN*
Ga0066903_1086863311	3300005764	Tropical Forest Soil	GAYAGYAQLGGAFYRDVPPGIYHIEVESYGRDFDQSTNIALVAGQEAYVKVESLRSWSTDHGAGRTIGRDTFYARLMLPQIARTEIAQSLFDGGS*
Ga0070766_100621154	3300005921	Soil	MNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDG
Ga0126372_108311741	3300010360	Tropical Forest Soil	PSETLNMTKVSMNGAYAGYAQLGGAFYRDVPPGVYHIEVESYGRDFNQSTNVALATGEEAYVRVDSLRSWATDYGRGRTVGRDTFYARLILPQTARAEIAQSFFDGGS*
Ga0126378_107371271	3300010361	Tropical Forest Soil	GTYAGYTQLGGAFYRDVPPGSYHIEVESYGRDFNQSTDVALVAGQEAYIRVDSLRSWASDLGRGRTIGRDTFYARLILPQIARAEIGQSFFDGGS*
Ga0126378_114395991	3300010361	Tropical Forest Soil	GAYAGYAQLGGAFYRDVPPGTYHIEVESYGTDFNQSTNIAVVPGQEAFVRIESLRSWATTYGLGFTAGRDTFYARQIFPQVARAEITQSFFDGGS*
Ga0126379_110074091	3300010366	Tropical Forest Soil	MNGTYAGYTQLGGAFYRDVPPGSYHIEVESYGRDFNQSTDVALVVGQEAYIRVDSLRSWASDLGRGRTIGRDTFYARLILPQIARAEIGQSFFDGGS*
Ga0136449_1006802011	3300010379	Peatlands Soil	MPLVRSALIPPIPAGKARLWFYRVYLPSETLNMTRVSMNGAYAGYAQLGGAFYRDVQPGIYHITVESYGRDFNQSTNVALVAGQEAFVEIESLRSWASTYGIGMGAGRDTFYA
Ga0136449_1009038381	3300010379	Peatlands Soil	MTRVSMNGAYAGYVQLGGAFYRDVQPGVYHITVESYGRDFNQSTNVALVAGQEAFVQIESLRSWASTYGIGMGAGRDTFYARLIFPWTARAEIAQSIFYRGG*
Ga0150983_106686851	3300011120	Forest Soil	AGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS*
Ga0164299_102769732	3300012958	Soil	LGGAFYRDVTPGVYQIEVESYGRDINQSADVALVAGQEAYVRVEPSRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS*
Ga0126369_120045641	3300012971	Tropical Forest Soil	FYRDVPPGVYHIDVESYGRDFNQSTNVALAAGQEAYIRVDSLRSWATDYGMGRTIGRDTFYARLILPQIAHVEIAQSFFDGGG*
Ga0126369_133833891	3300012971	Tropical Forest Soil	SETLNMTKVSMNGAYAGYAQLGGAFYRDVPPGVYHIEVESYGRDFNQSTNVALATGEEAYVRVDSLRSWATDYGRGRTVGRDTFYARLILPQTARAEIAQSFFDGGS*
Ga0137412_104569881	3300015242	Vadose Zone Soil	TLNMTKVSMNGVYAGYAQLGGAFYLDVPPGTYHIEVESYGRDFNQSTNVALVAGQELYIRVESLRSWATDHGQGRTVGRDTFYARLILPQIARTEIVQSFFDGGS*
Ga0182034_105206262	3300016371	Soil	LWFYRVYLPSETLNMTKVTMNGVYAGYAQLGGAFYRDVPPGTYHIEVESYGKDFNQSADVALVAGQEAYVQVETLRSWSTDYGRGRTIGRDTFYARLMLPQIARPELAQSFFDGGS
Ga0066655_106828632	3300018431	Grasslands Soil	MSSAYDGYAQLGGAFYRDVPPGTYHIEVESYGRDFNQSTNVALVAGQELYIKVESLRSWATDHGQGRTVGRDTFYARLILPQIARTEIVQSFFDGGS
Ga0210407_101877252	3300020579	Soil	MTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210399_108168011	3300020581	Soil	PARRARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210395_109891761	3300020582	Soil	GYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210395_114127761	3300020582	Soil	SPPIPPGEARVWFYRVYLPSETLNMTKVTMNGVYAGYAQLGGAFYRDVPPGTYHVEVASYGRDFDQSTNLAVAPGQEAYVKIESLDSWSTIVGAGFVAKRDTFYARLMLPQLAHAEIAQSFFDGGS
Ga0210401_109083271	3300020583	Soil	AFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDTWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210404_100660833	3300021088	Soil	MNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210405_101359623	3300021171	Soil	VWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210405_107640752	3300021171	Soil	YIPSETLNMTKVSMNGTYAGYAQLGGAFYRDVTPGVYQIEVESYGRDINQSADVALVAEQEAYIRVEPLRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS
Ga0213873_101003341	3300021358	Rhizosphere	NGVYAGYAQLGGAFYRDVPPGIYHVEVESYGRDFDQSTNVALVPGQDAYIKIESLSSWSTFVGAGYVAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0213876_103362442	3300021384	Plant Roots	DTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGRDFDQSTNVALVPGQDAYIKIESLSSWSTFVGAGYLAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210393_100839262	3300021401	Soil	MNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLKSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210397_106676061	3300021403	Soil	PPGEARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQTARSEIVQSFFDGGS
Ga0210387_113394671	3300021405	Soil	YAGYAQLGGAFYRDVTPGVYQIEVESYGRDINQSADVALVAGQEAYVRVEPLRSWAIGYGNRGMAGRDTFYARLILPQTARAEIMQSFFDGGS
Ga0210383_113729801	3300021407	Soil	GEARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDAPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210394_116907651	3300021420	Soil	MTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0210384_109131372	3300021432	Soil	LPLRQHVRARARAPARRARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0213871_100402711	3300021441	Rhizosphere	YRLYIPSESRNMTAVSMNGVYAGYSRLGGAFYRDVPPGLYHIEVESYGRDIDQSTNAVMVPGQEAYVRVDSLRSWATGYGPRGMAGRDTFYARLIVPQTARVEIVQSFYDGGS
Ga0210390_110201841	3300021474	Soil	DVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLGSWSTFVGAGYVAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0126371_103175862	3300021560	Tropical Forest Soil	MTSVSMNGTYAGYTQLGGAFYRDVPPGSYHIEVESYGRDFNQSTDVALVVGQEAYIRVDSLRSWASDLGRGRTIGRDTFYARLILPQIARAEIGQSFFDGGS
Ga0126371_108374792	3300021560	Tropical Forest Soil	MTKVSMNDVYAGYAQLGGAFYRDVPPGVYHIEVESYGRDFNQSANVALVAGQEAYIRVESLRSWSSDYNRGTTVGRDTFYARLILPQIARAEIAQSFFDGGS
Ga0242659_10679371	3300022522	Soil	AVPPIPPGEARVWFYRVYLPSETLNMTKVTMNGVYAGYAQLGGAFYRDVPPGTYHVEVASYGRDFDQSTNLAVAPGQEAYVKIESLDSWSTIVGAGFVAKRDTFYARLMLPQLAHAEIAQSFFDGGS
Ga0242671_11044531	3300022714	Soil	AQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLKSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0207692_102492991	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTKVTMNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSQIVQSFFDGGS
Ga0207692_110838611	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FYRDVTPGVYQIEVESYGRDINQSADVALVAGQEAYVRVEPLRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS
Ga0207663_115631381	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0207700_117896861	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AFYRDVTPGVYQIEVESYGRDINQSADVALVAGQEAYVRVEPLRSWATGYGNRGMAGRDTFYARLILPQTARAEIMQSFFDGGS
Ga0207664_105221062	3300025929	Agricultural Soil	GRGGRRLNMTKVSMNGTYAGYAQLGGAFYRDVTPGVYQIEVESYGRDINQSADVALVAEQEAYIRVEPLRSWATGYGHRGMAGRDTFYARLILPQTARAEIMQSFFDGGS
Ga0207664_113223251	3300025929	Agricultural Soil	MNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0208365_10025293	3300027070	Forest Soil	MNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDTWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0208860_10190552	3300027076	Forest Soil	PARRARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0209419_11132001	3300027537	Forest Soil	RVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0209528_11244071	3300027610	Forest Soil	MNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0207826_11810781	3300027680	Tropical Forest Soil	AIPPGEARLWLYRIYLPSETLNMTKVTMNGVYAGYAQLGGAFYRDVPPGTYHIEVESYGKDFNQSADVALVAGQEAYVKVETLRSWSTDYGRGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0209446_11076022	3300027698	Bog Forest Soil	LNMTKVTMNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSMLIRLTPKPTIY
Ga0209772_101549102	3300027768	Bog Forest Soil	AIPPIPAGKARLWIYRIYLPSETLNMTRVSMNGAYAGYAQSGGAFFRNVPPRIYHITVESYGRDFNQSTNVALVAGREAFVEIESLRSWATNYGIGMGSGRDTFYARLIFPWTARAEIGQSIFYGGG
Ga0209040_103279801	3300027824	Bog Forest Soil	EARLWFYRVYLPSETLNMTKVSMNGAYAGYAQLGGAFYRNVPPGVYHIEVESYGRDFNQSTNVALVAGQEAYVRVESLRSWASDYGIGRTIGRDTFYARLILPQAARAEIAQSFFDGGS
Ga0209488_103452023	3300027903	Vadose Zone Soil	GVYAGYAQLGGAVYRDVPPGTYHIEVESYGRDFNQSTNVALVAGQELYIRVESLRSWATDHGQGRTVGRDTFYARLILPQIARTEIVQSFFDGGS
Ga0209526_102996921	3300028047	Forest Soil	VSVPPIPPGEARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0222749_107064922	3300029636	Soil	GEARVWFYRVYLPSDTLNMTKVTMNGVYAGYAQLGGAFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTFVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0075388_114717932	3300030848	Soil	TRFEADFAAMNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYIKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0170820_101345992	3300031446	Forest Soil	YAGYAQLGGAFYRNVPPGVYHIEVESYGRDFNQSTNVALVAGQEAYVRVESLRSWASDYGIGRTIGRDTFYARLILPQAARAEIAQSVFDGGS
Ga0170818_1043799241	3300031474	Forest Soil	MTKLSMNGAYAGYAQLGGAFYRNVPPGVYHIEVESYGRDFNQSTNVALVAGQEAYVRVESLRSWASDYGIGRTIGRDTFYARLILPQTARAEIAQSFFDGGS
Ga0310915_103377451	3300031573	Soil	GEARLWFYRIYLPSETLNMTKVTMNGVYAGYAQLGGAFYRDVPPGTYHIEVESYGKDFNQSADVALVAGQEAYVKVETLRSWSTDYGRGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318560_107434071	3300031682	Soil	VSVAPISPGEARLWFYRVYLPSETLNMTKVTMNGAYAGYAQLGGAFYRDVPPGIYHIEVESYGRDFDQSTNIALVAGQEAYVKVESLRSWSTDHGAGRTIGRDTFYARLMLPQIARTEIAQSLFDGGS
Ga0310686_1063865371	3300031708	Soil	RLWFYRVYLPSETLNMTRVSMNGVYAGYAQLGGAFYRDVQPGVYHITVESYGRDFNQSTNVALVAGQEAFVEIESLRSWASTYGIGMGAGRDTFYARTIFPWTARAEIAQSIFYGGG
Ga0306917_106756522	3300031719	Soil	MNGAYAGYAQLGGAFYRDVTPGIYHIEVESYGRDFNQSTNVALVAGQEAYIRVESLRSWATDYGIGRTVGRDTFYARLILPGTARAEIVQSFFDGGS
Ga0306917_110116172	3300031719	Soil	YAGYAQLGGAFYRDVPPGSYHIEVESYGRDFNQSTDVALVVGQEAYIRVDSLRSWASDLGRGRTIGRDTFYARLILPQIARAEIGQSFFDGGS
Ga0318500_104276851	3300031724	Soil	VYLPSETLNMTKVTMNGAYAGYAQLGGAFYRDVPPGIYHIEVESYGRDFDQSTNIALVAGQEAYVKVESLRSWSTDHGAGRTIGRDTFYARLMLPQIARTEIAQSLFDGGS
Ga0306918_100519415	3300031744	Soil	LVLSRLYTLRNFNMTKITMNGAYAGYAQLGGAFYRDVTPGIYHIEVESYGRDFNQSTNVALVAGQEAYIRVESLRSWATDYGIGRTVGRDTFYARLILPGTARAEIVQSFFDGGS
Ga0306918_109096741	3300031744	Soil	MNGVYAGYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLSQIARAEIAQSFFDGGS
Ga0307475_100938731	3300031754	Hardwood Forest Soil	AFYRDVPPGNYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLDSWSTLVGAGYAAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0318509_105474611	3300031768	Soil	KVTMNGVYAGYAQLGGAFYRDVPPGTYHIEVESYGKDFNQSADVALVAGQEAYVQVETLRSWSTDYGRGRTIGRDTFYARLMLPQIARPELAQSFFDGGS
Ga0318521_103335761	3300031770	Soil	VVPIPPGEARLWFYRVYLPSETLNMTKVTMNGVYAGYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318546_109948001	3300031771	Soil	GYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318552_107330112	3300031782	Soil	TKVTMNGAYAGYAQLGGAFYRDVPPGIYHIEVESYGRDFDQSTNIALVAGQEAYVKVESLRSWSTDHGAGRTIGRDTFYARLMLPQIARTEIAQSLFDGGS
Ga0318557_103029933	3300031795	Soil	GYAQLGGAFYRDVTPGIYHIEVESYGRDFNQSTNVALVAGQEAYIRVESLRSWATDYGIGRTVGRDTFYARLILPGTARAEIVQSFFDGGS
Ga0318499_103884792	3300031832	Soil	LNMTKVTMNGVYAGYAQLGGAFYRDVPPGTYHIEVESYGKDFNQSADVALVAGQEAYVQVETLRSWSTDYGRGRTIGRDTFYARLMLPQIARPELAQSFFDGGS
Ga0306919_102652451	3300031879	Soil	EARLWFYRFYDPSETLNITKISMNGAYAGYAQLGGAFYRDVPPGVYHVEVESYGRDVDQSTNVALAAGQEAYVRVESLRSWATNYGIGTTIGRDTFYARLILPETARAEIAQSFFDGGN
Ga0306919_108492131	3300031879	Soil	MTKVTMNGVYAGYAQLGGAFYRDVPPGTYHIEVESYDRDFNQSTNVALAAGQEAYIRVESLRSWSTEYGRGTTVGRDTFYARLIVPQVARAEIAQSFFDGGS
Ga0306925_106120283	3300031890	Soil	GYAQLGGAFYRDVPPGTYHIEVESYGKDFNQSADVALVAGQEAYVQVETLRSWSTDYGRGRTIGRDTFYARLMLPQIARPELAQSFFDGGS
Ga0306921_106964522	3300031912	Soil	MNGAYAGYAELGGAFYRDVTPGIYHIEVESYGRDFNQSTNVALVAGQEAYIRVESLRSWATDYGIGRTVGRDTFYARLILPGTARAEIVQSFFDGGS
Ga0310912_105720571	3300031941	Soil	MTKVTMNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNVALVPGQDAYVKIESLGSWSTFVGAGYVAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0310913_107742422	3300031945	Soil	FYRDVTPGIYHIEVESYGRDFNQSTNVALVAGQEAYIRVESLRSWATDYGIGRTVGRDTFYARLILPGTARAEIVQSFFDGGS
Ga0310910_110337711	3300031946	Soil	GAYAGYAQLGGAFYRDVPPGVYHVEVESYGRDVDQSTNVALAAGQEAYVRVESLRSWATNYGIGTTIGRDTFYARLILPETARAEIAQSFFDGGN
Ga0306926_126542332	3300031954	Soil	LGGAFYRDVTPGIYHIEVESYGRDFNQSTNVALVAGQEAYIRVESLRSWATDYGIGRTVGRDTFYARLILPGTARAEIVQSFFDGGS
Ga0318530_101635951	3300031959	Soil	NGAYAGYAQLGGAFYRDVPPGIYHIEVESYGRDFDQSTNIALVAGQEAYVKVESLRSWSTDHGAGRTIGRDTFYARLMLPQIARTEIAQSLFDGGS
Ga0306922_101331233	3300032001	Soil	MNGVYAGYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318507_103483941	3300032025	Soil	NMTKVTMNGVYAGYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318556_104079492	3300032043	Soil	VYAGYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318506_105277552	3300032052	Soil	LNMTKVTMNGVYAGYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318570_105169502	3300032054	Soil	PSETLNMTKVTMNGVYAGYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS
Ga0318553_105899221	3300032068	Soil	FYRVYLPSETLNMTKVTMNGAYAGYAQLGGAFYRDVPPGIYHIEVESYGRDFDQSTNIALVAGQEAYVKVESLRSWSTDHGAGRTIGRDTFYARLMLPQIARTEIAQSLFDGGS
Ga0306924_105855871	3300032076	Soil	MTKVTMNGVYAGYAQLGGAFYRDVPPGIYHVEVESYGKDFDQSTNIALVPGQDAYVKIESLSSWSTFVGAGYVAARDTFYARLMLPQIARSEIVQSFFDGGS
Ga0318577_106043651	3300032091	Soil	VPPGSYHIEVESYGRDFNQSTDVALVVGQEAYIRVDSLRSWASDLGRGRTIGRDTFYARLILPQIARAEIGQSFFDGGS
Ga0335076_106127412	3300032955	Soil	GKARVWFYRIYLPSDTLNMTRVTMNGAYAGYAQLGGAFYRDVAPGVYHVEVESYGRDFGQSTTVALVPGQVAYVQIESLRSWATMPGFGFTAGRDTFYARLIFPEAARAQIGQSFFDGGS
Ga0318519_106747022	3300033290	Soil	RLWFYRVYLPSETLNMTKVTMNGVYARYAQLGGAFYRDVPPGSYHIEVESYGKDFNQSAEVALVAGQEAYVKVDSLRSWASDYGVGRTIGRDTFYARLMLPQIARAEIAQSFFDGGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094684

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences