Metagenome / Metatranscriptome Family F094726

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094726
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	83 residues
Representative Sequence	LLITAFMVHGGLLGVVVGALLAIFAVGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSWVARMARLLFTGRALWQLRTRLASRA
Number of Associated Samples	81
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	90.48 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.143 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (58.095 % of family members)
Environment Ontology (ENVO)	Unclassified (67.619 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.57% β-sheet: 0.00% Coil/Unstructured: 30.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF11303	DUF3105	4.76
PF00221	Lyase_aromatic	2.86
PF00440	TetR_N	1.90
PF02481	DNA_processg_A	1.90
PF01636	APH	1.90
PF08031	BBE	1.90
PF07690	MFS_1	1.90
PF00072	Response_reg	0.95
PF00106	adh_short	0.95
PF00501	AMP-binding	0.95
PF02775	TPP_enzyme_C	0.95
PF02768	DNA_pol3_beta_3	0.95
PF13610	DDE_Tnp_IS240	0.95
PF13701	DDE_Tnp_1_4	0.95
PF01471	PG_binding_1	0.95
PF00005	ABC_tran	0.95
PF07110	EthD	0.95
PF04525	LOR	0.95
PF13520	AA_permease_2	0.95
PF01872	RibD_C	0.95
PF08044	DUF1707	0.95
PF13676	TIR_2	0.95
PF08530	PepX_C	0.95
PF00710	Asparaginase	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	3.81
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	2.86
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.90
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.90
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.95
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.95
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.95
COG2936	Predicted acyl esterase	General function prediction only [R]	0.95
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
All Organisms	root	All Organisms	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
cellular organisms	root	All Organisms → cellular organisms	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	5.71 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.95 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.95 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.95 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	4.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.95 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.95 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	4.76 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.95 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	4.76 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.95 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.95 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.14 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	4.76 %
Frankia sp. CcI6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CcI6	0.95 %
Rhodococcus sp. WB9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. WB9	0.95 %
Pseudonocardia sp. TRM90224	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10842065	Not Available	552	Open in IMG/M
3300005332\|Ga0066388_102367713	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300005332\|Ga0066388_102578293	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005712\|Ga0070764_10019097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3409	Open in IMG/M
3300009700\|Ga0116217_10180187	Not Available	1397	Open in IMG/M
3300009792\|Ga0126374_10151322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1406	Open in IMG/M
3300010048\|Ga0126373_12814105	Not Available	543	Open in IMG/M
3300010360\|Ga0126372_13187769	Not Available	510	Open in IMG/M
3300010366\|Ga0126379_13585121	Not Available	520	Open in IMG/M
3300010376\|Ga0126381_103033463	Not Available	666	Open in IMG/M
3300016294\|Ga0182041_10993903	Not Available	758	Open in IMG/M
3300016319\|Ga0182033_10240631	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1465	Open in IMG/M
3300016319\|Ga0182033_11961810	Not Available	533	Open in IMG/M
3300016341\|Ga0182035_10523503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1016	Open in IMG/M
3300016371\|Ga0182034_11301848	Not Available	634	Open in IMG/M
3300016387\|Ga0182040_10779041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	787	Open in IMG/M
3300017924\|Ga0187820_1149547	Not Available	702	Open in IMG/M
3300017942\|Ga0187808_10392353	Not Available	634	Open in IMG/M
3300017943\|Ga0187819_10612038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300017955\|Ga0187817_11016794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300017959\|Ga0187779_10057740	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300017972\|Ga0187781_10700245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300017973\|Ga0187780_10983438	Not Available	614	Open in IMG/M
3300018060\|Ga0187765_10109825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	1513	Open in IMG/M
3300018062\|Ga0187784_10504658	Not Available	975	Open in IMG/M
3300020580\|Ga0210403_11343248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. WB9	544	Open in IMG/M
3300020583\|Ga0210401_10064167	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300021171\|Ga0210405_10044106	All Organisms → cellular organisms → Bacteria	3539	Open in IMG/M
3300021479\|Ga0210410_10056280	All Organisms → cellular organisms → Bacteria	3429	Open in IMG/M
3300021560\|Ga0126371_10469215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1406	Open in IMG/M
3300021560\|Ga0126371_10835055	Not Available	1067	Open in IMG/M
3300022715\|Ga0242678_1086668	Not Available	505	Open in IMG/M
3300027874\|Ga0209465_10212610	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300027879\|Ga0209169_10210166	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300028906\|Ga0308309_11024107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300031231\|Ga0170824_101095815	Not Available	718	Open in IMG/M
3300031543\|Ga0318516_10674458	Not Available	588	Open in IMG/M
3300031549\|Ga0318571_10056711	Not Available	1184	Open in IMG/M
3300031549\|Ga0318571_10444516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300031573\|Ga0310915_10636534	Not Available	755	Open in IMG/M
3300031573\|Ga0310915_10990615	Not Available	587	Open in IMG/M
3300031573\|Ga0310915_11121446	Not Available	546	Open in IMG/M
3300031640\|Ga0318555_10424330	Not Available	721	Open in IMG/M
3300031640\|Ga0318555_10680718	Not Available	556	Open in IMG/M
3300031723\|Ga0318493_10731263	Not Available	555	Open in IMG/M
3300031744\|Ga0306918_10820963	Not Available	726	Open in IMG/M
3300031744\|Ga0306918_10864587	Not Available	705	Open in IMG/M
3300031751\|Ga0318494_10432796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	764	Open in IMG/M
3300031751\|Ga0318494_10751861	Not Available	571	Open in IMG/M
3300031768\|Ga0318509_10745159	Not Available	543	Open in IMG/M
3300031769\|Ga0318526_10318310	Not Available	636	Open in IMG/M
3300031770\|Ga0318521_10276221	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300031771\|Ga0318546_10225599	Not Available	1285	Open in IMG/M
3300031778\|Ga0318498_10169389	Not Available	993	Open in IMG/M
3300031782\|Ga0318552_10008729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4155	Open in IMG/M
3300031782\|Ga0318552_10730130	Not Available	505	Open in IMG/M
3300031792\|Ga0318529_10484038	Not Available	575	Open in IMG/M
3300031796\|Ga0318576_10215902	Not Available	903	Open in IMG/M
3300031797\|Ga0318550_10660615	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031819\|Ga0318568_11049026	Not Available	503	Open in IMG/M
3300031831\|Ga0318564_10172161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	965	Open in IMG/M
3300031845\|Ga0318511_10204002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	879	Open in IMG/M
3300031845\|Ga0318511_10545332	Not Available	538	Open in IMG/M
3300031846\|Ga0318512_10180743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1027	Open in IMG/M
3300031846\|Ga0318512_10355395	Not Available	733	Open in IMG/M
3300031859\|Ga0318527_10060350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1500	Open in IMG/M
3300031859\|Ga0318527_10109054	Not Available	1142	Open in IMG/M
3300031859\|Ga0318527_10389844	Not Available	594	Open in IMG/M
3300031860\|Ga0318495_10204547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	889	Open in IMG/M
3300031890\|Ga0306925_10424684	Not Available	1423	Open in IMG/M
3300031897\|Ga0318520_10623861	Not Available	671	Open in IMG/M
3300031910\|Ga0306923_11094446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	859	Open in IMG/M
3300031945\|Ga0310913_10617017	Not Available	769	Open in IMG/M
3300031946\|Ga0310910_10848540	Not Available	718	Open in IMG/M
3300031947\|Ga0310909_10298507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1350	Open in IMG/M
3300031954\|Ga0306926_11325113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	839	Open in IMG/M
3300032001\|Ga0306922_11545895	Not Available	662	Open in IMG/M
3300032001\|Ga0306922_12285059	Not Available	519	Open in IMG/M
3300032009\|Ga0318563_10296102	Not Available	875	Open in IMG/M
3300032009\|Ga0318563_10334566	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300032010\|Ga0318569_10325558	Not Available	716	Open in IMG/M
3300032025\|Ga0318507_10498044	Not Available	530	Open in IMG/M
3300032035\|Ga0310911_10589930	Not Available	645	Open in IMG/M
3300032039\|Ga0318559_10236924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	843	Open in IMG/M
3300032044\|Ga0318558_10129784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1201	Open in IMG/M
3300032044\|Ga0318558_10314979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300032052\|Ga0318506_10048955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1699	Open in IMG/M
3300032052\|Ga0318506_10536279	Not Available	518	Open in IMG/M
3300032055\|Ga0318575_10222077	Not Available	951	Open in IMG/M
3300032055\|Ga0318575_10591704	Not Available	562	Open in IMG/M
3300032065\|Ga0318513_10015011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3124	Open in IMG/M
3300032067\|Ga0318524_10562125	Not Available	600	Open in IMG/M
3300032089\|Ga0318525_10270388	Not Available	873	Open in IMG/M
3300032089\|Ga0318525_10370621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	734	Open in IMG/M
3300032089\|Ga0318525_10685401	Not Available	521	Open in IMG/M
3300032090\|Ga0318518_10351480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	757	Open in IMG/M
3300032091\|Ga0318577_10180599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300032160\|Ga0311301_10542210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CcI6	1704	Open in IMG/M
3300032261\|Ga0306920_102001421	Not Available	811	Open in IMG/M
3300032261\|Ga0306920_104061277	Not Available	530	Open in IMG/M
3300032892\|Ga0335081_11724805	Not Available	681	Open in IMG/M
3300032954\|Ga0335083_10164115	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300033134\|Ga0335073_10363058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1710	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.19%
Aquatic	Environmental → Aquatic	3.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.19%
Freshwater	Environmental → Aquatic → Freshwater	3.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.62%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	73.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	58.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_108420652	3300004633	Tropical Forest Soil	VVGALLTILAVGVAAVGALVWLALRLWRRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP*
Ga0066388_1023677133	3300005332	Tropical Forest Soil	LLIAAFLVHGGLLAAVVAALLAILAAGVAAVGALVWLAWRLWRRHAWIEAVPPLAGQPWLSLVARIARVLFTGRALWRLRTRLASHA*
Ga0066388_1025782933	3300005332	Tropical Forest Soil	HGGLLAAVVAALLAILAAGVAAVGALAWLAWQLWRRHAWIEAVPPVAGQPWLSLVARIARVLFTGRALWRLRTRLASRA*
Ga0070764_100190974	3300005712	Soil	GSLLVLTLLITAFMVHGGLLGVVVGALLAIFAVGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSWVARMARLLFTGRALWQLRTRLASRA*
Ga0116217_101801874	3300009700	Peatlands Soil	AFMVHGGLLGVVVGALLAILGVGVAAVGALVWLARWLWRRHAWVEAVPLVAGQPWLSRVARMARLLLTGHALWQLRTRLASRA*
Ga0126374_101513222	3300009792	Tropical Forest Soil	VHGGLLAAVVAALLAILAAGVAAVGALAWLAWQLWRRHAWIEAVPPVAGQPWLSLVARIARVLFTGRALWRLRTRLASRA*
Ga0126373_128141052	3300010048	Tropical Forest Soil	LIAAFLVHGGLLAAVVAALLVILLAGVAAAGAVVWLALRLWRHHAWIEAVPPVVGQPWLSVVARLARVLLTGRALWRLRTRLASRA*
Ga0126372_131877691	3300010360	Tropical Forest Soil	LVLTLLIAAFLVHGGLLAAVVAALLAILAAGVAAVGALVWLAWRLWRRHAWIEVVPPVAGQPWLSLVTRIARVLFTGRALWRLRTRMASRA*
Ga0126379_135851211	3300010366	Tropical Forest Soil	TALVVHGGLLAVVAGALLAILAVGLAAVAALVWLARRLWRRHAWIEAVPLVTGQPWLSQVARMARLLLTGRALWRWRTRLASRA*
Ga0126381_1030334631	3300010376	Tropical Forest Soil	VVAALLAILAAGVAAVGALVWLAWQLWRRHAWIEAVPPVAGQPWLSLVARIARVLFTGRALWRLRTRLASRA*
Ga0182041_109939031	3300016294	Soil	LTLLIIAFMVHGGLFGVVVGALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0182033_102406311	3300016319	Soil	AFLVHGGLLAAVVAALLTILAAGVAAVGALVWLAWRLWRRHAWIEAVPPVIGQPWLSRVARMARLLLTGNALWRLRTRLASRA
Ga0182033_119618102	3300016319	Soil	VVAGALLAILAAGVAAVGALAWLAGRLWRRHAWIEAVPLVAGQPWLSRVARMARLLVTGHALWRLRARVASRA
Ga0182035_105235032	3300016341	Soil	LAFGVMTAGSLLVIALLIAAFMVHGGLLAVMVSALLAILAVGVAAMVALVWLARRLWRRHAWIEAVPLVAGQPWLSRAVRMARLSLASRALWQLRTRLASRA
Ga0182034_113018482	3300016371	Soil	VTAGSLLVLTLLIIAFMMHGGLLGVVVGALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRS
Ga0182040_107790412	3300016387	Soil	FMVHGGLLGVVVGALLTILAVGVAAVGALVWLALRLWRRHAWIEAVPLVAGQPWLSRVARMARVLLTGHAFWQLRTRLASRA
Ga0187820_11495471	3300017924	Freshwater Sediment	FMVHGGLLGVVLGALLAILVVGLAAVGALVWLARRLWRRHAWIEAVPLAAGQPWLSRVARMARLLLTGHALWRLRTRLASRA
Ga0187808_103923531	3300017942	Freshwater Sediment	LLVLTLLITAFMVHGGLLGVVVGALLAILALGVAAVGALVWLARRLWRRHAWIEAVPLVAGLPWLSRVARIARLLLAGHAFWQLRTRQASRA
Ga0187819_106120381	3300017943	Freshwater Sediment	HGGLLGVVVGALLAVLAVGVAAVGALVWLARRLWQRHAWIEAAPLVAGQPWLSRVARMARLLLTGHALWQRPRRRQRLRAVRNIT
Ga0187817_110167942	3300017955	Freshwater Sediment	GLLGVVVGALLAILVVGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSWVARIARLLFTGRALWQLRTRLASRA
Ga0187779_100577403	3300017959	Tropical Peatland	LLGVVVGVLLAILATGIAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0187781_107002451	3300017972	Tropical Peatland	AGSLLVLTLLITAFMVHGGLLGVVVGVLLTILAVGVAAVGALVWLARRLWRHHVWIEAVPLVAGQPWLSRVARMARLLLTGHALWQLRTRLASRA
Ga0187780_109834382	3300017973	Tropical Peatland	LLGVVVGALLAILAVGVAAVGALVWLAGRLWRRHAWIEAVPLVAGQPWLSRVARMARLLLTGHTLWRLRTRVAPRT
Ga0187765_101098251	3300018060	Tropical Peatland	LVTGGALLLLTLLITAFMVHGGVLGVVVGVLLAILAAAVVAVAGLVWLARRLWLRHAWIEAVPLVTGQPWLGGVARMARWLLTGHALWRLRTRLASRG
Ga0187784_105046581	3300018062	Tropical Peatland	GGLLGVVAGALLAILVVGVAALGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGRALWLLRTRLAARA
Ga0210403_113432481	3300020580	Soil	AILAAGVAAVAGLAGLARRLWVRHAWIEAVPLATGQPWLSQVARVARLLLTGRALLRLRTRLASRG
Ga0210401_100641673	3300020583	Soil	TAGSLLVLTLLITAFMVHGGLLGVVVGALLAIFAVGVAAVGALVWLARRLWWRHAWIEAVPLVAGQPWLSWVARMARLLFTGRALWQLRTRLASRA
Ga0210405_100441061	3300021171	Soil	VVVGALLAIFAVGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSWVARMARLLFTGRALWQLRTRLASRA
Ga0210410_100562801	3300021479	Soil	LLITAFMVHGGLLGVVVGALLAIFAVGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSWVARMARLLFTGRALWQLRTRLASRA
Ga0126371_104692151	3300021560	Tropical Forest Soil	VTAGSLLVLALLITAFIVHGGLLGIVVGALLAILAVGVAAVGALVWLARRLWRRHAWIEAAPLVIGQPWLSRVARMARLLLTGRALWQLRARLASRA
Ga0126371_108350551	3300021560	Tropical Forest Soil	VTALLVHGGLLAVVVAALLTILTVGVAAAAGLGWLVWRLWRRHAWIEAVPPMTGQPWLSLVARMARLLLTSRALWRLRTRLAARA
Ga0242678_10866681	3300022715	Soil	GLLGVVVGALLAIFAVGVAAVAALVWLARRLWRRHAWIEAVPLVAGQPWLSWVARMARLLFTGRALWQLRTRLASRA
Ga0209465_102126101	3300027874	Tropical Forest Soil	FMVHGGLLGVVVGALLTILAVGVAAVGALVWLALRLWRRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0209169_102101661	3300027879	Soil	GSLLVLTLLITAFMVHGGLLGVVVGALLAIFAVGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSWVARMARLLFTGRALWQLRTRLASRA
Ga0308309_110241072	3300028906	Soil	LLAILATGVVAVAGLVWLARRLWLRHAWIEAVPLATGQPWLGRVARMARWLLTGRALWRLRTKLASRA
Ga0170824_1010958152	3300031231	Forest Soil	LGAVVGVLLAMLAAGVAAVVGLAWLARRLWLRHAWIEAVPSVAGQPWLSLVARMARLLLAGRALWRLRARLAYRA
Ga0318516_106744582	3300031543	Soil	VVVGVLLAILAIGVAAVGAVVWLARRLWRRHAWIEAVPLVVGLPWLSRVARMARLLFTGRALWQLRTRLAARA
Ga0318571_100567111	3300031549	Soil	VTAGSLLVLTLLITAFMVHGGLLGVVVGALLAILAAGVAAVGAVVWLARRLWRRHAWIEAAPLVAGQPWLSRLARMARLLLTGHALWRVRARLASRA
Ga0318571_104445162	3300031549	Soil	LMVHGGLLGVVVSALLTILAVGVAAVGALVWLARRLWLRHAWIEAVPLLAGQPWLSRAARVVRLLVTSRALWQLRTRLASRA
Ga0310915_106365342	3300031573	Soil	IAFMMHGGLLGVVVGALLAILAVGVSAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0310915_109906151	3300031573	Soil	VVLGALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLTGHAFWQLRTRLASRA
Ga0310915_111214461	3300031573	Soil	VHGGLFGVVVGALLAILALGVAVVGAVVWLARRLWRRHAWIEAVPLVTGQPWLSQIARMARLLLTGHALWRWRTRLASRA
Ga0318555_104243301	3300031640	Soil	AVVAALLAILAAGVAAVGALVWLAWRLWRRHAWIEAVAPAAGQPWLSLVARIARVLFTGRALWRLRTRLASHA
Ga0318555_106807181	3300031640	Soil	VTALLVHGGLLAAVVAALLTILAVGVTAAGGLVWLAWRLWRRHAWIEAVPPVVGQPWLSLVARMARLLFTGRALWRLRTRLASRA
Ga0318493_101373913	3300031723	Soil	ALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLTGHAFWQLRTRLASRA
Ga0318493_107312632	3300031723	Soil	VLTVLITAFVVHGGLLGVVAGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0306918_108209631	3300031744	Soil	MMHGLLGVVVGALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0306918_108645872	3300031744	Soil	TAGSLLVLSLLITALVVHGGLLAVVAGALLAILAVGLAAVAALVWLARRLWRRHAWIEAMPLVTGQPWLSQVARMARLLLTGHALWRWRTRLASRA
Ga0318494_104327961	3300031751	Soil	AGSLLVLTLLITAFLVHGGLLGVVLGALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLAGHAFWQLRTRLASRA
Ga0318494_107518612	3300031751	Soil	AGSLLVLTLLITALVVHGGLLAVVAGALLAILAVGVAAVGALVWLARRLWLRHAWIEAVPLVTGQPWLSQVARMARLLLTGHALWRWRTRVASRA
Ga0318509_107451591	3300031768	Soil	FQEHGGLLGVVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAAPLVAGQPWLSRLARMARLLLTGHALWRVRARLASRA
Ga0318526_103183102	3300031769	Soil	LLGVVAGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0318521_102762211	3300031770	Soil	VHGGLLAAVVAALLAILAAGVAAVGALAWLAVRLWRRHAWIEAVPPVAGQPWLSLVARIARVVFTSRALWRLRTRLASRA
Ga0318546_102255992	3300031771	Soil	GALLAILAVGVADVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0318498_101693891	3300031778	Soil	GGLLGVVVAALLAIVAVGVAIVGGLVWLARRLWLRHAWIEAVPLVVGQPWLSQVARMARLLLTGHALWQLRTRLASRP
Ga0318552_100087291	3300031782	Soil	LLISAFMVHGGLLGVVVGALLAILAAGVATVGALAWLAWRLWRRHAWIEAVPLVAGQPWLSWVARVARLLFTGRALWQLRTRLASRA
Ga0318552_107301301	3300031782	Soil	HGLLGVVVGALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0318529_104840381	3300031792	Soil	AFLVHGGLLGLVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSRVARMARVLLTGHAFWQLRTRLASRA
Ga0318576_102159021	3300031796	Soil	LAVVAGALLAILAVGLAAVAALVWLARRLWRRHAWIEAMPLVTGQPWLSQVARMARLLLTGHALWRWRTRLASRA
Ga0318550_106606152	3300031797	Soil	ISALMVHGGLLGVVVSALLTILAVGVAAVGALVWLARRLWLRHAWIEAVPLLAGQPWLSRVARVVRLLVTSRALWQLRTRLASRA
Ga0318568_110490261	3300031819	Soil	VLSLLIAAFVVHGGLLAAVVAALLAILAAGVAAVGALVWLVLRLWRRHAWIEAVPPVAGQPWLSLVVRIARVLFTGRALWRLRTRLASRA
Ga0318564_101721611	3300031831	Soil	IALLIAAFMVHGGLLAVMVSALLAILAVGVAAMVALVWLARRLWRRHAWIEAVPLVAGQPWLSRAVRMARLSLASRALWQLRTRLASRA
Ga0318511_102040021	3300031845	Soil	LGVVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0318511_105453321	3300031845	Soil	LLVLTLLIAVFLVHGGLLGIVLGALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLTGHAFWQLRTRLASRA
Ga0318512_101807431	3300031846	Soil	NTAFLVHGGLLGVVLGALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLTGHAFWQLRTRLASRA
Ga0318512_103553951	3300031846	Soil	GVVTAGSLLVLTLLVTAFLVHGGLLGVVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAAPLVAGQPWLSRLARMARLLLTGHALWRVRARLASRA
Ga0318527_100603501	3300031859	Soil	VHGGLLGVVVGALLAILAAGVATVGALAWLAWRLWRRHAWIEAVPLVAGQPWLSWVARVARLLFTGRALWQLRTRLASRA
Ga0318527_101090541	3300031859	Soil	LLVTALLVHGGLLAAVVAALLTILAVGVTAAGGLVWLAWRLWRRHAWIEAVPPVVGQPWLSLVARMARLLFTGRALWRLRTRLASRA
Ga0318527_103898441	3300031859	Soil	HGTLLAAVVAALLTILAAGMAAVGALVWLAWRLWRRHAWIEAVPPLAGQPWLSLVARIARMLFTGRALWRLRTRLASRA
Ga0318495_102045471	3300031860	Soil	LISAFMVHGGLLGVVVGALLAILAAGVATVGALAWLAWRLWRRHAWIEAVPLVAGQPWLSWVARVARLLFTGRALWQLRTRLASRA
Ga0306925_104246841	3300031890	Soil	GSLLVLSLLITAFMVHGGLLGVVLGALLAVLAVGVAAVGALAWLARRLWRRHAWIEAALLVAGQPWLSRVARMARLLLTGHALWQLRTRLASRA
Ga0318520_106238612	3300031897	Soil	LLVLTVLIAAFVVHGGLLGVVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0306923_110944462	3300031910	Soil	LVTALLVHGGLLAVVVAALLTILTLGVAAAAALVWLVWGLWRRHAWIEALPPLTGQPWLTLVARLARLVLTGRALWRLRTRLASRA
Ga0310913_106170171	3300031945	Soil	MVHGLLGVVVGALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0310910_108485401	3300031946	Soil	GALLAMLAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0310909_102985071	3300031947	Soil	IALLITAFMVHGGLLAVMVSALLAIFAVGVAALAALVWLARRLWRRHAWIEAVPLVAGQPWLSRAVRMARLSLASRALWQLRTRLASRA
Ga0306926_113251132	3300031954	Soil	IVLGALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLAGHAFWQLRTRLASRA
Ga0306922_115458952	3300032001	Soil	TVLITAFVVHGGLLGVVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0306922_122850591	3300032001	Soil	AFMVHGGLLGVVVAALLAIVAVGVAIVGGLVWLARRLWLRHAWIEAVPLVVGQPWLSQVARMARLLLTGHALWQLRTRLASRP
Ga0318563_102961021	3300032009	Soil	GALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0318563_103345661	3300032009	Soil	AFLVHGGLLAAVVAALLAILAAGVAAVGALAWLAVRLWRRHAWIEAVPPVAGQPWLSLVARIARVVFTSRALWRLRTRLASRA
Ga0318569_103255581	3300032010	Soil	LTAGSLLVLTLLIAAFLVHGGLLAAVVAALLAILAAGVAAVGSLAWLAWRLWRRHAWIEAVPPVAGQPWLSLVARIARVLFTGRALWRLRTRLASHA
Ga0318507_104980441	3300032025	Soil	VVTAGSLLLLTLLITAFMVHGGLLGVVLGALLAILAVGVAAVGALVWLAQRLWRRHAWIEAVPLMAGQPWLSRAARMARLSLTGRALWQLRTRLASRA
Ga0310911_105899302	3300032035	Soil	MMHGLLGVVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAAPLVAGQPWLSRLARMARLLLTGHALWRLRVRLASRA
Ga0318559_102369242	3300032039	Soil	IVLGALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLTGHAFWQLRTRLASRA
Ga0318558_101297841	3300032044	Soil	GSLLVIALLITAFMVHGGLLAVMVSALLAIFAVGVAALAALVWLARLLWRRHAWIEAVPLVAGQPWLSRAVRMARLSLASRALWQLRTRLASRA
Ga0318558_103149791	3300032044	Soil	LLITAFLVHGGLLGLVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSRVARMARVLLTGHAFWQLRTRLASRA
Ga0318506_100489552	3300032052	Soil	MVSALLAILAVGVAAMVALVWLARRLWRRHAWIEAVPLVAGQPWLSRAVRMARLSLASRALWQLRTRLASRA
Ga0318506_105362791	3300032052	Soil	GSLLVLTLLIAVFLVHGGLLGIVLGALLAVLAVGVAAVGALVWLARRLWRRHAWIEAVPLVVGQPWLSRVARLARLLLTGHAFWQLRTRLASRA
Ga0318575_102220771	3300032055	Soil	LGVVVGALLAMLAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0318575_105917041	3300032055	Soil	RVTAGTLLVLTVLIAAFVVHGGLLGVVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0318513_100150114	3300032065	Soil	GLVVGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVAGQPWLSRVARMARVLLTGHAFWQLRTRLASRA
Ga0318524_105621251	3300032067	Soil	IVHGGLLGVVVGALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0318525_102703882	3300032089	Soil	HGGLLGVVVGALLTILAVGVAAVGALVWLALRLWRRHAWIEAVPLAAGQPWLSRVARIARLLFTGHALWRLRTRLASRA
Ga0318525_103706211	3300032089	Soil	GLLGVVAGALLAILAAGVAAVGALVWLARRLWRRHAWIEAVPLVIGQPWLSRVARMARLLLTGHALWRLRVRLASRA
Ga0318525_106854011	3300032089	Soil	LLLLTLLITAFMVHGGLLGVVLGALLAILAVGVAAVGALVWLAQRLWRRHAWIEAVPLMAGQPWLSRAARMARLSLTGRALWQLRTRLASRA
Ga0318518_103514802	3300032090	Soil	LITAFLVHGGLLAAVVAALLAILAAGVAAVSSLAWLAWRLWRRHAWIEAVPPVAGQPWLSLVVRIARVLFTSRALWRLRTRLASRA
Ga0318577_101805991	3300032091	Soil	LIAAFMVHGGLLAVMVSALLAILAVGVAAMVALVWLARRLWRRHAWIEAVPLVAGQPWLSRAVRMARLSLASRALWQLRTRLASRA
Ga0318577_104748562	3300032091	Soil	LTILAVGVAAVGALVWLARRLWLRHAWIEAVPLLAGQPWLSRVARVVRLLVTSRALWQLRTRLASRA
Ga0311301_105422103	3300032160	Peatlands Soil	VGALLAILGVGVAAVGALVWLARWLWRRHAWVEAVPLVAGQPWLSRVARMARLLLTGHALWQLRTRLASRA
Ga0306920_1020014212	3300032261	Soil	VLTLLIIAFMVHGGLLGVVVGALLAILAVGVAAVGAVLWLARRLWLRHAWIEAVPLVAGQPWLSQVARMARLLLAGRALWQLRTRLASRP
Ga0306920_1040612771	3300032261	Soil	LVLTLLITAFMVHGGLLGVVVGALLAIVAVGVAAVAGLVWLARRLWRRHAWIEAVPLVVGQPWLSRVVRMARLLLTGHALWQLRTRLASRA
Ga0335081_117248051	3300032892	Soil	LITAFMVHGGLLGVVVGALLAILAVGVAAVGAVVWLTRQLWRRHAWIEAAPLMTGQPWLSQVARIARLLLTGRALWQLRTRLASRA
Ga0335083_101641151	3300032954	Soil	LLITAFMVHGGLLGVVVGVLLAILAVGVAAVGAVVWLARWLWRRHAWIEAVPLVAGQPWLSQAARMARLLLTGRALWQLRTRLASRP
Ga0335073_103630581	3300033134	Soil	SLAFAALLVVAMLHGGLLGVAAGILLAIFVVGAAVVGTAAWLARRLWRRQAWVEAAPLAAGQPWLTRLIRAARVLLTTHALWRLRSRLSSRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094726

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences