Metagenome / Metatranscriptome Family F094982

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094982
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	101 residues
Representative Sequence	MISRSDGRNFHLLLADRPLAYPMERGEDPTPLTSVCFWYVYGEEGATKSTVVLFESFAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Number of Associated Samples	70
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.50 %
% of genes near scaffold ends (potentially truncated)	25.71 %
% of genes from short scaffolds (< 2000 bps)	61.90 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.714 % of family members)
Environment Ontology (ENVO)	Unclassified (45.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.05% β-sheet: 29.46% Coil/Unstructured: 53.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
e.29.1.1: RNA-polymerase beta	d4g7hc_	4g7h	0.59506
d.128.1.5: GatB/GatE catalytic domain-like	d1zq1c3	1zq1	0.58708
d.260.1.0: automated matches	d6lpha_	6lph	0.58457
e.29.1.1: RNA-polymerase beta	d4c2mb_	4c2m	0.57559
d.189.1.0: automated matches	d3iq2a1	3iq2	0.56658

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01757	Acyl_transf_3	23.81
PF02515	CoA_transf_3	22.86
PF00343	Phosphorylase	7.62
PF02954	HTH_8	2.86
PF00977	His_biosynth	1.90
PF00815	Histidinol_dh	0.95
PF06684	AA_synth	0.95
PF03150	CCP_MauG	0.95
PF01435	Peptidase_M48	0.95
PF14579	HHH_6	0.95
PF02894	GFO_IDH_MocA_C	0.95
PF00691	OmpA	0.95
PF00069	Pkinase	0.95
PF01641	SelR	0.95
PF16656	Pur_ac_phosph_N	0.95
PF00753	Lactamase_B	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	22.86
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	7.62
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.81
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.95
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.95
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.10 %
Unclassified	root	N/A	21.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.10 %
Unclassified	root	N/A	21.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.10 %
Unclassified	root	N/A	21.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100003138	All Organisms → cellular organisms → Bacteria	11925	Open in IMG/M
3300002917\|JGI25616J43925_10062475	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300005537\|Ga0070730_10198983	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005537\|Ga0070730_10394975	Not Available	895	Open in IMG/M
3300005602\|Ga0070762_10078703	All Organisms → cellular organisms → Bacteria → Proteobacteria	1871	Open in IMG/M
3300006162\|Ga0075030_100635872	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300007258\|Ga0099793_10004266	All Organisms → cellular organisms → Bacteria	5062	Open in IMG/M
3300009088\|Ga0099830_10590758	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300011269\|Ga0137392_11066292	Not Available	663	Open in IMG/M
3300011270\|Ga0137391_11013359	Not Available	675	Open in IMG/M
3300011271\|Ga0137393_10149650	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300012202\|Ga0137363_10536976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300012202\|Ga0137363_10749570	Not Available	827	Open in IMG/M
3300012203\|Ga0137399_10956163	Not Available	721	Open in IMG/M
3300012205\|Ga0137362_10547816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300012582\|Ga0137358_10577152	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300012683\|Ga0137398_10019372	All Organisms → cellular organisms → Bacteria → Acidobacteria	3664	Open in IMG/M
3300012922\|Ga0137394_10170536	All Organisms → cellular organisms → Bacteria → Proteobacteria	1855	Open in IMG/M
3300012923\|Ga0137359_11767844	Not Available	505	Open in IMG/M
3300012924\|Ga0137413_10013292	All Organisms → cellular organisms → Bacteria	4122	Open in IMG/M
3300012927\|Ga0137416_10576786	Not Available	977	Open in IMG/M
3300012929\|Ga0137404_10039670	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300012944\|Ga0137410_10122948	All Organisms → cellular organisms → Bacteria → Acidobacteria	1950	Open in IMG/M
3300015051\|Ga0137414_1170240	All Organisms → cellular organisms → Bacteria → Acidobacteria	2051	Open in IMG/M
3300015054\|Ga0137420_1175222	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300015241\|Ga0137418_10001073	All Organisms → cellular organisms → Bacteria	25035	Open in IMG/M
3300015245\|Ga0137409_10018817	All Organisms → cellular organisms → Bacteria	6822	Open in IMG/M
3300020579\|Ga0210407_10000050	All Organisms → cellular organisms → Bacteria	160488	Open in IMG/M
3300020579\|Ga0210407_10602872	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300020579\|Ga0210407_10689528	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300020579\|Ga0210407_11318686	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300020580\|Ga0210403_10006957	All Organisms → cellular organisms → Bacteria	9458	Open in IMG/M
3300020581\|Ga0210399_10007504	All Organisms → cellular organisms → Bacteria → Proteobacteria	8516	Open in IMG/M
3300020581\|Ga0210399_10046963	All Organisms → cellular organisms → Bacteria	3464	Open in IMG/M
3300020581\|Ga0210399_10059609	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300020581\|Ga0210399_10081917	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300020581\|Ga0210399_11103982	Not Available	634	Open in IMG/M
3300020583\|Ga0210401_10031927	All Organisms → cellular organisms → Bacteria	5017	Open in IMG/M
3300020583\|Ga0210401_10064314	All Organisms → cellular organisms → Bacteria	3454	Open in IMG/M
3300020583\|Ga0210401_11636807	Not Available	501	Open in IMG/M
3300021168\|Ga0210406_10003151	All Organisms → cellular organisms → Bacteria	18285	Open in IMG/M
3300021168\|Ga0210406_10133392	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300021168\|Ga0210406_10230072	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300021168\|Ga0210406_10812020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300021168\|Ga0210406_11017953	Not Available	615	Open in IMG/M
3300021170\|Ga0210400_10000025	All Organisms → cellular organisms → Bacteria	277496	Open in IMG/M
3300021170\|Ga0210400_10265565	All Organisms → cellular organisms → Bacteria → Acidobacteria	1405	Open in IMG/M
3300021171\|Ga0210405_10002584	All Organisms → cellular organisms → Bacteria	18650	Open in IMG/M
3300021180\|Ga0210396_10105860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2543	Open in IMG/M
3300021180\|Ga0210396_10848092	Not Available	781	Open in IMG/M
3300021180\|Ga0210396_11586634	Not Available	535	Open in IMG/M
3300021404\|Ga0210389_10421777	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300021404\|Ga0210389_11483577	Not Available	516	Open in IMG/M
3300021405\|Ga0210387_10331148	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300021405\|Ga0210387_11342887	Not Available	617	Open in IMG/M
3300021406\|Ga0210386_10266465	All Organisms → cellular organisms → Bacteria → Acidobacteria	1464	Open in IMG/M
3300021420\|Ga0210394_10000086	All Organisms → cellular organisms → Bacteria	226010	Open in IMG/M
3300021420\|Ga0210394_10300125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300021474\|Ga0210390_10728723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300021474\|Ga0210390_11290191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300021475\|Ga0210392_10498737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300021478\|Ga0210402_10048571	All Organisms → cellular organisms → Bacteria	3706	Open in IMG/M
3300021478\|Ga0210402_10442215	Not Available	1208	Open in IMG/M
3300021479\|Ga0210410_10001333	All Organisms → cellular organisms → Bacteria	23492	Open in IMG/M
3300021479\|Ga0210410_10652132	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300021479\|Ga0210410_11138193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300021559\|Ga0210409_10190598	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300022532\|Ga0242655_10247630	Not Available	563	Open in IMG/M
3300024222\|Ga0247691_1000372	All Organisms → cellular organisms → Bacteria	9722	Open in IMG/M
3300024288\|Ga0179589_10467561	Not Available	583	Open in IMG/M
3300024330\|Ga0137417_1320725	All Organisms → cellular organisms → Bacteria	3319	Open in IMG/M
3300026285\|Ga0209438_1033496	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300026304\|Ga0209240_1221937	Not Available	573	Open in IMG/M
3300026319\|Ga0209647_1025700	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300026475\|Ga0257147_1052489	Not Available	610	Open in IMG/M
3300026490\|Ga0257153_1087045	Not Available	625	Open in IMG/M
3300026514\|Ga0257168_1143820	Not Available	531	Open in IMG/M
3300026555\|Ga0179593_1104982	All Organisms → cellular organisms → Bacteria → Proteobacteria	2432	Open in IMG/M
3300026555\|Ga0179593_1213152	All Organisms → cellular organisms → Bacteria	3580	Open in IMG/M
3300027565\|Ga0209219_1069190	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300027591\|Ga0209733_1002011	All Organisms → cellular organisms → Bacteria	4701	Open in IMG/M
3300027635\|Ga0209625_1010612	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300027643\|Ga0209076_1131372	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300027663\|Ga0208990_1061620	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300027908\|Ga0209006_10157946	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300027911\|Ga0209698_10374974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1115	Open in IMG/M
3300028047\|Ga0209526_10050056	All Organisms → cellular organisms → Bacteria	2942	Open in IMG/M
3300028536\|Ga0137415_10000643	All Organisms → cellular organisms → Bacteria	34060	Open in IMG/M
3300029636\|Ga0222749_10479469	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031231\|Ga0170824_110566596	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031231\|Ga0170824_112977948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1935	Open in IMG/M
3300031718\|Ga0307474_10006634	All Organisms → cellular organisms → Bacteria → Proteobacteria	8367	Open in IMG/M
3300031720\|Ga0307469_10028927	All Organisms → cellular organisms → Bacteria	3179	Open in IMG/M
3300031740\|Ga0307468_100267490	All Organisms → cellular organisms → Bacteria → Acidobacteria	1216	Open in IMG/M
3300031754\|Ga0307475_10017226	All Organisms → cellular organisms → Bacteria	4982	Open in IMG/M
3300031754\|Ga0307475_10046946	All Organisms → cellular organisms → Bacteria	3229	Open in IMG/M
3300032174\|Ga0307470_10338120	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300032174\|Ga0307470_10536968	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300032174\|Ga0307470_10593491	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300032180\|Ga0307471_100050982	All Organisms → cellular organisms → Bacteria	3414	Open in IMG/M
3300032180\|Ga0307471_100367941	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300032180\|Ga0307471_100826835	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300032180\|Ga0307471_103003037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.10%
Aquatic	Environmental → Aquatic	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.10%
Sediment	Environmental → Aquatic → Sediment	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.48%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_10000313810	3300002245	Forest Soil	MISRSDGRNYHLLLADRPHTYPAERGVGPVQKISACFWYVYGADRQATKTSVVLFEDIFGGKANVFRQIEFIADILADELLRRQRLAVFYNMRGNGILELAY*
JGI25616J43925_100624752	3300002917	Grasslands Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESRAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0070730_101989831	3300005537	Surface Soil	MISRSDGRNFHLLLADRPLPYPMERAGGPTGTISVCFWYVYGAEKRETKSTVVLFEGTLGLKSTLFRQIESIADMLADELLFRQGLGVLYNLQGHEILELAY*
Ga0070730_103949751	3300005537	Surface Soil	MISRSDGRNFHLLLADRPLPYPAERGEGPTQLISACFWYIYGADRGATKSTVVLFEGVFGAKASIFREIEYVADVLSVELLRRHSLAIFYNMQGSGILELAY*
Ga0070762_100787032	3300005602	Soil	MISRSDGRTFHLLLADRPLPYPAERGAAPTRMVSVCFWYLYGADRNGTKSTVVLFEGGFGPKANIFRRIEFIVDVLADELLRRRSLAVFYNMQGNEILELAY*
Ga0075030_1006358721	3300006162	Watersheds	MISRSDGRNFHLLLADRPLPYPVERHKGRTLKASACFWYLYGTGSSATKSTVVLFECAFGGKANIYRQIESIADVLAEELVRRQSLAVFYNMQGERILELAY*
Ga0099793_100042663	3300007258	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPGPLTSVCFWYVYGEESATKSTVVLFESRAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0099830_105907582	3300009088	Vadose Zone Soil	MPMISRSDGRNFHLLLADGPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFECLFGPKANIFRQIEFIADVLSDELLRRQSLAVFYNMQGNEILELGY*
Ga0137392_110662921	3300011269	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPGPLTSVCFWYVYGEEGATKSTVVLFESCTGSREKIFRKIEFIADVLADKLLRRQELGVFYNLQGNEILQLTY*
Ga0137391_110133591	3300011270	Vadose Zone Soil	PHCELNGEEALLSRLSEGMPMISRSDGRNFHLLLADRPLAYPMERGENPKPMTSVCFWYVYGAERDDTKSTVVLFECGAGCKEKIFRQIEFIADVLAEELLRRQSLAVFYNLQGNEVLELTY*
Ga0137393_101496503	3300011271	Vadose Zone Soil	DGRNFHLLLADRPLAYPMERGENPKPMTSVCFWYVYGAERDDTKSTVVLFECGAGCKEKIFRQIEFIADVLAEELLRRQSLAVFYNLQGNEVLELTY*
Ga0137363_105369762	3300012202	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCTGSREKIFRKIEFVADVLADELLRRQELGVFYNLQGNEILQLTY*
Ga0137363_107495702	3300012202	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESFAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137399_109561632	3300012203	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137362_105478162	3300012205	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCTGSREKIFRKIEFVADVLADELLRRQELGVFYNLQGNEILQLTY*
Ga0137358_105771521	3300012582	Vadose Zone Soil	HLLLADRPLAYPMERGEDPGPLTSVCFWYVYGEESATKSTVVLFESRAGSREKIFRQIEFIADVLADELLRRQELGVFYHLQGNEILQLTY*
Ga0137398_100193723	3300012683	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137394_101705362	3300012922	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPGPLTSVCFWYVYGEESATKSTVVLFESRAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137359_117678442	3300012923	Vadose Zone Soil	PLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRQIEFIADVLADELLRRQELGVFYHLQGNEILQLTY*
Ga0137413_100132922	3300012924	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPGPLTSVCFWYAYGEESATKSTVVLFESRAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137416_105767862	3300012927	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESFAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137404_100396701	3300012929	Vadose Zone Soil	MPMISRSDGRNFHILLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESFAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137410_101229481	3300012944	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRQIEFIADVLADELLRRRE
Ga0137414_11702403	3300015051	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPGPLTSVCFWYAYGEESATKSTVVLFESRAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137420_11752222	3300015054	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESRAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137418_1000107327	3300015241	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0137409_100188172	3300015245	Vadose Zone Soil	MPMISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCASSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY*
Ga0210407_10000050122	3300020579	Soil	MISRSDGRNFHLLLADRPLPFPAELGGGPTRMSSVCFWYLYGADRSATRSTVVLLEGMFGPKANIFRQIEFIADLLADELLRHQSLAIFYNMQADRIQELSY
Ga0210407_106028723	3300020579	Soil	MISRSDGRNFHLLLADRPLPYPMESGEGPTRMTSVCFWYAYGAGKSATKSTVVLFECCAGPKERLFRQIEFVADVLAGELLRCRQLAVFYNLQGDSILELSY
Ga0210407_106895281	3300020579	Soil	MISRSDGRNFHLLLADRPLPYPAERGEGSTQMVSVCFWYLYGSDSFATKSTVVVFESLSGLKANIFRQIEFIADVLSDELLRRKSLAVFYNMQGNEMLELG
Ga0210407_113186861	3300020579	Soil	PLPYPAERGGNPTRTVSACFWYVYGADQNATRSTVALFAGSFGPKANIFRQIEFIADLLSDELQQRRSLSPFCSIQGNEILELAY
Ga0210403_100069573	3300020580	Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPKPMTSVCFWYVYGAGGVATKSAVVLFECGADSREKIFRQIEFIADVLADELRRRRSLALFYNLQGDVILELAY
Ga0210399_100075044	3300020581	Soil	MISRSDGRTFHLLLADRPLPYPAERGGGTSPTVSVCFWYLYGADRNEAKSTVVLFEGCSSPKANLFRRIEFIADVLADELLRQQSLAVFYNLEGNAILELAY
Ga0210399_100469633	3300020581	Soil	MISRSDGRNFHLLLADRPLPYPAERNEGRTLKASACFWYLYGAGRSATKSTVVLFECAFGGKANIYRQIEFIADVLAEELVRRQSLAVFYNMQGDRILELAY
Ga0210399_100596092	3300020581	Soil	MISRSDGRNFHILLADRPLPYPAELGAGPTQTVSVCFWYTYGEKKAETKSAVVLFECCADPKKKMYRQIEFIADLLADELLRRRELASFYHLQGDSILELSY
Ga0210399_100819172	3300020581	Soil	MISRSDGRNFHLLLADRPLPFPAELGGGPTRMTSVCFWYLYGADRSATKSTVVLLEGMFGPKTNIFRQIEFIADLLADELLRHQSLAIFYNMQADRIQELSY
Ga0210399_111039821	3300020581	Soil	MISRSDGRNFHLLLADRPLPYPAERGEGPTQMVSVCFWYLYGSDSFATKSTVVVFESLSGLKANIFRQIEFIADVLSDELLRRKSLAVFYNMQGNEM
Ga0210401_100319272	3300020583	Soil	MISRSDGRNFHLLLADRPLPYPAERSGNPTRTVSACFWYVYGADQNATRSTVALFAGSFGPKANIFRQIEFIADLLSDELQQRRSLAAFCSIQGNEILELAY
Ga0210401_100643144	3300020583	Soil	MISRSDGRTFHLLLADRPLPYPAERGAAPTRMVSVCFWYLYGADRNGTKSTVVLFEGGFGPKANIFRRIEFIVDVLADELLRRRSLAVFYNMQGNEILELAY
Ga0210401_116368071	3300020583	Soil	MISRSDGRNFHLLLADRPLPYPAERGEGSTQMVSVCFWYLYGSDSFATKSTVVVFESLSGLKANIFRQIEFIADVLSDELLRRKSL
Ga0210406_1000315120	3300021168	Soil	MISRSDGRNFHLLLADRPLPYPAERGEGSTQMVSVCFWYLYGSDSFATKSTVVVFESLSGLKANIFRQIEFIADVLSDELLRRQSLAVFYNMQGNEMLELGY
Ga0210406_101333922	3300021168	Soil	MISRSDGRNFHLLLADRPLPYPAERNEGRTLKASACFWYLYRAGRSATKSTVVLFECAFGGKANIYRQIEFIADVLAEELVRRQSLAVFYNMQGDRILELAY
Ga0210406_102300722	3300021168	Soil	MISRSDGWNFHLLLADRPLPYPIERSYGPTRTTSLCFWYVYGAEGAKTKSTVVLFESGTNSREQIFRQIEFIADVLADKLLCRRELAVFYHLQGRSILEQCY
Ga0210406_108120202	3300021168	Soil	MISRSDGRNFHLLLADQPLAYPMERDEDQKPMTSVCFWYAYGAKGDETKSTVVLFACGAGSREKTFRQIEFIADILADELQRRRELAVFYNLQGNEILELTY
Ga0210406_110179531	3300021168	Soil	GIPMISRSDGRNFHLLLADRPLPYPMESGEGPTRMTSVCFWYTYGAGKSATKSTVVLFECCAGPKERLFRQIEFVADVLAGELLRCRQLAVFYNLQGDSILELSY
Ga0210400_10000025100	3300021170	Soil	MISRSDGRNFHLLLADRPLPYPAERAVGPTPTMSVCFWYLYGANRNEAKTTVVLFEGLSSRKANLFRQIEFIADVLADELLRSRSLAVFYNLKGNEILQLAY
Ga0210400_102655652	3300021170	Soil	MISRSDGRNFHLLLADRPLPYPAERGGGPTQMVSVCFWYLYGADQGATKSTVVLFEGVFGAKASIFRQIEFIADVLADELLRRQSLAVLYNMQGNEILELAY
Ga0210405_1000258418	3300021171	Soil	MISRSDGRNFHLLLADRPLPYPAERGGAPTRVISACFWYLNGADRSATKSTVVLFEGASGAKANIFRQIEFIADVLADKLLRRQSLAVFYNMQGNEILELAY
Ga0210396_101058602	3300021180	Soil	MISRSDGRNFHLLLADRPLPYPAERSGNPTRTVSACFWYVLGADQDATRSTVVLFEGGAGSRANIFRQIEFIADLLSDELQQRRSLAPFCSIQGNEILELAY
Ga0210396_108480921	3300021180	Soil	MISRSDGRNFHLLLADRPLPYPAERSGSPTRTVSACFWYVYGADQNVTRSTVALFEGGYGPRASIFRQIEFIADLLSEELLRRKSLAIFYDVQGNEIRELAY
Ga0210396_115866341	3300021180	Soil	MISRSDGRNFHLLLADRPLPYPAERNEGRTLKASACFWYLYGAGRSATKSTVVLFECAFGGKANIYRQIEFIADVLAEELVRRQSLAVFYNMQGDRILELA
Ga0210389_104217772	3300021404	Soil	HLLLADRPLPYPAERGGGTSPTVSVCFWYLYGADRNEAKSTVVLFEGCSSPKANLFRRIEFIADVLADELLRQQSLAVFYNLEGNAILELAY
Ga0210389_114835771	3300021404	Soil	MISRSDGRNFHLLLADRPLPYPAERSGNPTRTVSACFWYVLGADQDATRSTVVLFEGGAGSRANIFRQIEFIA
Ga0210387_103311482	3300021405	Soil	MISRSDGRNFHLLLADRPLPYPAELGGEPTQTVSVCFWYTYGEVKAATKSAVVLFESCAHPQEKLYRQIEFIADLLADELLRRRDLAIFYNLQGNAILELSY
Ga0210387_113428871	3300021405	Soil	MISRSDGRNFHLLLADRPLPYPMESGEGPTRMTSVCFWYAYGAGKSATKSTVVLFECCAGPKERLFRQIEFVADVLAGELLRCRQLAVFYNLQGDSILEL
Ga0210386_102664651	3300021406	Soil	MISRSDGRNFHLLLADRPLPYPMESGEGPTRMTSVCFWYTYGAGKSATKSTVVLFECCADPKERLFRQIEFVADVLAGELLRCRQLAVFYNLQGDSILELSY
Ga0210394_1000008625	3300021420	Soil	MISRSDGRNFHLLLADRPLPYPVERHKGRTLKASACFWYLYGTGSSAAKSTVVLFECAFGGKANIYRQIESIADVLAEELVRRQSLAVFYNMQGERILELAY
Ga0210394_103001252	3300021420	Soil	MISRSDGRNFHILLADRPLPYPAELGADPTQTVSVCFWYTYGEKKAETKSAVVLFERCADPKKKMYRQIEFIADLLADELLRRRELASFYHLQGDSILELSY
Ga0210390_107287232	3300021474	Soil	MISRSDGRNFHLLLADRPLPYPAECGEGPTRMVSVCFWYLYGADRNAPKSTVVLFEGAFGPKSNVFREIEYIADILADELLRRQRLAVFYNIQGNEILELAY
Ga0210390_112901911	3300021474	Soil	RFSEGIPMISRSDGRNFHILLADRPLPYPAELGADPTQTVSVCFWYTYGEKKAETKSAVVLFERCADPKKKMYRQIEFIADLLADELLRRRELASFYHLQGDSILELSY
Ga0210392_104987371	3300021475	Soil	FSEGIPMISRSDGRNFHILLADRPLPYPAELGADPTQTVSVCFWYTYGEKKAETKSAVVLFERCADPKKKMYRQIEFIADLLADELLRRRELASFYHLQGDSILELSY
Ga0210402_100485713	3300021478	Soil	MISRSDGRNFHLLLADRPLPYPAELGGAPTQTVSVCFWYTYGEEKAATKSTVVLFESCAHLKEKLYRQIEFVADVLADELLRRRELAVFYNLQGNSVLELRY
Ga0210402_104422152	3300021478	Soil	MISRSDGRNFHLLLADKPVPYPAERNEGRTLKASTCFWYLYGVDRSATKSTVVLFECAFGGKANIYRQIEFIADVLAEELVRRQNLAVFYNMQGDRILELAYCFPHWRFCSQRCRSSRVS
Ga0210402_117999691	3300021478	Soil	ADRPLPYPAELGADPTQTVSVCFWYTYGEKKAETKSAVVLFECCADPKKKMYRQIEFIADLLADELLRRRELASFYHLQGDSILELSY
Ga0210410_1000133310	3300021479	Soil	MISRSDGRNFHLLLADRPLPYPAERGAAPTRMVSVCFWYLYGADRNGTKSTVVLFEGGFGLKANIFRRIEFIVDVLADELLRRRSLAVFYNMQGNEILELAY
Ga0210410_106521321	3300021479	Soil	MISRSDGRNFHLLLADRPLPYPAERNEGRTLKASACFWYLYRAGRSATKSTVVLFECAFGGKANIYRQIEFIADVLAEELVRRQNLAVFYNMQSDRILELAY
Ga0210410_111381931	3300021479	Soil	MPMISRSDGRSFHLLLADHPLPYPAERVAGPTRTTSVCFWYVYGEEMSATKSTVVIFECSASSRDNMYRRIEFIADVLADELVRRRELAVFYNLQGNSVLELTY
Ga0210409_101905981	3300021559	Soil	ISRSDGRNFHILLADRPLPYPAELGAGPTQTVSVCFWYAYGEKKAETKSAVVLFECCADPKKKMYRQIEFIADLLADELLRRRELASFYHLQGDSILELSY
Ga0210409_113391391	3300021559	Soil	TANGSGEEALLSRLSEGMPMISRSDGRNFHLLLADRPLAYPMERGKDPKPMRSVCFWYVYGAEGGATKSTVVLFACCAGPRKKIFRQIEFITDVLADELLRRRELAVFYNLQGNEILELA
Ga0242655_102476301	3300022532	Soil	MISRSDGRNFHLLLADKPVPYPAERNEGRTLKASTCFWYLYGVDRSATKSTVVLFECAFGGKANIYRQIESIADVLAEELVRRQSLAVFYNMQGDRILELAY
Ga0247691_10003723	3300024222	Soil	MISRSDGRNFHLLLADRPLPYPAERASGPTRTISVCFWYLYGDETSATKSTVVIFECSTGAKDKIYRQIEFVADVLADELLRRKELAVFYNLQENSILELSY
Ga0179589_104675612	3300024288	Vadose Zone Soil	IGEEPLLSRWSEGMPMISRSDGRNFHLLLADRPLPYPVELGADPTQTVSVCFWYTYGKEKAETKSAVLLSESSAHQKEKLYRQIEFIADVLADELLRQRELASLYNLQGNSILELSY
Ga0137417_13207254	3300024330	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESFAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Ga0209438_10334963	3300026285	Grasslands Soil	SRSDGRNFHLLLADRPLAYPMERGEDPGPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Ga0209240_12219371	3300026304	Grasslands Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEAATKSAVVLFESCDGSREKIFRRIEFIADVLADELLRRQELGVFYNL
Ga0209647_10257004	3300026319	Grasslands Soil	MISRSDGRHFHLLLADHPLPYPAELGGGPTQTVSVCFWYAYGEEKTATKSAVVLFEPCGVRKEKMYRLIEFIADVLADELVRRRELAAFYNLQGNSVLELSY
Ga0257147_10524892	3300026475	Soil	MISRSDGRNFHLLLADRPLPYPVELGAGPAQTVSVCFWYAYGKEWAATKSAVVIFESCARPKEKLYRQIEFIADVLADELLRPRELAVFYNLHGNSILELSY
Ga0257153_10870452	3300026490	Soil	MISRSDGRNFHLLLADRPLAYPMERDEDQKPMTSVCFWYAYGAKGDETKSTVVLFECGAGSREKTFRQIEFIADILADELQRRQELAVFYNLQGNEILELTY
Ga0257168_11438201	3300026514	Soil	MISRSDGRNFHLLLADRPLPFPAELGGGPTRMTSVCFWYLYGADRSATKSTVVLLEGVFGPKANIFRQIEFIADLLA
Ga0179593_11049822	3300026555	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPTPLTSVCFWYVYGEEGATKSTVVLFESFAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Ga0179593_12131522	3300026555	Vadose Zone Soil	MISRSDGRNFYLLLADRPLAYPMELGEDPRPLTSVCFWYVCGEEGATKSTVVLFESFAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Ga0209219_10691901	3300027565	Forest Soil	SEGIPMISRSDGRNFHLLLADRPLPYPAERGGVPTQMVSVCFWYLYGSNSIATKSTVVIFEGLFGVKAKIFRQIEYIADVLTDELLRRQSLAVFYNMQGNGIQELAY
Ga0209733_10020113	3300027591	Forest Soil	MISRSDGRNFHLLLADRPLPYPAERGGVPTQMVSVCFWYLYGSNSIATKSTVVIFEGLFGVKAKIFRQIEYIADVLTDELLRRQSLAVFYNMQGNGIQELAY
Ga0209625_10106122	3300027635	Forest Soil	MISRSDGRNYHLLLADRPQAYPAERGEGPAQKVSACFWYVYGADREATKTSVVLFEDVFGAKANVFRQIEFVADILADELLRRQRLAVFYNMQGRGILELGY
Ga0209076_11313721	3300027643	Vadose Zone Soil	LLADRPLAYPMERGEDPGPLTSVCFWYVYGEESATKSTVVLFESRAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Ga0208990_10616201	3300027663	Forest Soil	MISRSDGRNFHLLLADRPLAYPMELGEDARPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRQIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Ga0209006_101579462	3300027908	Forest Soil	MISRSDGRNYHLLLADRPHTYPAERGVGPVQKISACFWYVYGADRQATRTSVVLFEDIFGGKANVFRQIEFIADILADELLRRQRLAVFYNMRGNGILELAY
Ga0209698_103749742	3300027911	Watersheds	MISRSDGRNFHLLLADRPLPYPVERHKGRTLKASACFWYLYGTGSSATKSTVVLFECAFGGKANIYRQIESIADVLAEELVRRQSLAVFYNMQGERILELAY
Ga0209526_100500563	3300028047	Forest Soil	MISRSDGRNYHLLLADRPHTYPAERGVGPVQKISACFWYVYGADRQATKTSVVLFEDIFGGKANVFRQIEFIADILADELLRRQRLAVFYNMRGNGILELAY
Ga0137415_100006436	3300028536	Vadose Zone Soil	MISRSDGRNFHLLLADRPLAYPMERGEDPRPLTSVCFWYVYGEEGATKSTVVLFESCAGSREKIFRRIEFIADVLADELLRRRELGVFYHLQGNEILQLTY
Ga0222749_104794691	3300029636	Soil	LLLADRPLPYPAECGEGPTRMVSVCFWYLYGADRNATKSTVVLFEGAFGPKSNVFREIEYIADILADELLRRQSLAVFYNIQGNEILELAY
Ga0170824_1105665962	3300031231	Forest Soil	MISRSDGRNFHLLLADRPLPYPAEVSGDPTQTVSVCFWYAYGEQKTETRSVVVLLESSARPKEKLYRQIEFIADLLADELLRGRDLARFYNLQGNTILELSY
Ga0170824_1129779482	3300031231	Forest Soil	MISRSDGCTFHLLLADRPLPCPMERTYGVTRITSLCFWYVYGAEGARTKSAVVLFEDGASSKQKFFRQIEFIADILADELVRRRELAVLYNLQGSSILEQSY
Ga0307474_100066346	3300031718	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPAERGGAPTRVISACFWYLNGADRSATKSTVVLFEGAYGAKANIFRQIEFVADVLADKLLRRQSLAVFYNMQGNEILELAY
Ga0307469_100289273	3300031720	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPMESGEGPTRMTSVCFWYAYGAGKSATKSTVVLFECCAGPKERLFRQIEFVADVLAGELLRRRQLAVFYNLQGDSILELSY
Ga0307468_1002674902	3300031740	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPMESGEGPTRMTSVCFWYAYGAGKSATKSTVVLFECCAGPKERLFRQIEFVADVLAGELLRCRQLAVFYNLQGDSILE
Ga0307475_100172263	3300031754	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPAERVAGPTRTISVCFWYVYGEGMNTTKSTVVIFESLAGPRETLYRQIECIADVLTDELLRRRELAVFYNLQGNTILEVSY
Ga0307475_100469463	3300031754	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPAERGGAPTRVISACFWYLNGADRSATKSTVVLFEGAYGAKANIFRQIEFIADVLADKLLRRQSLAVFYNMQGNEILELAY
Ga0307470_103381203	3300032174	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPAERNEARTLKASACFWYLYGADRSATKSTVVLFECAFGGKANIYRQIESIADVLTEELVRRRSLAVFYNMQGDRILELAY
Ga0307470_105369681	3300032174	Hardwood Forest Soil	LLFRLSEGIPMISRSDGRNYHLLLADRPLPYPAERSGNPTRTVSACFWYVYGADQKAMKSTVALFEERFEPRANIFRQIEFIADLLSDELLRRRSLAPFCSIQGNEILELAY
Ga0307470_105934911	3300032174	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPVELGAGPTETVSVCFWYAYGMERAATKSAVVIFESCAHPKEKLYRQIEFIADVLADELLRRREL
Ga0307471_1000509822	3300032180	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYSAERNEGRTQKTSACFWYLYGADRSATKSLVVLFECATGGKANIYRQIEFIADVLAEELARHQSLAVFYNMQGERILELAY
Ga0307471_1003679412	3300032180	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPIENSEGPTRKTSVCFWYLYGAEKGATKSAVVLFESLAGANERAFRQIESIADLLSDELLRRRELAVFYSLRDNSILELGY
Ga0307471_1008268353	3300032180	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPAERIEARTLKASACFWYLYGADRSATKSTVVLFECAFGGKANIYRQIESIADVLTEELVRRQSLAVFYNMQGDRILELAY
Ga0307471_1030030371	3300032180	Hardwood Forest Soil	MISRSDGRNFHLLLADRPLPYPVELGAGPTETVSVCFWYTYGKEKAATKSAVVIFESCAHPKEKLYRQIEFIADVLADELLRRRELAVFYNLQGNSILELSY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences