Metagenome Family F095004

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095004
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	54 residues
Representative Sequence	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYAHYAAGEQAVRMKVGPDTETGE
Number of Associated Samples	37
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.27 %
% of genes near scaffold ends (potentially truncated)	14.29 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.905 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (64.762 % of family members)
Environment Ontology (ENVO)	Unclassified (66.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.190 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.78% β-sheet: 0.00% Coil/Unstructured: 54.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13460	NAD_binding_10	6.67
PF05853	BKACE	5.71
PF09861	Lar_N	4.76
PF07080	DUF1348	2.86
PF13177	DNA_pol3_delta2	1.90
PF00248	Aldo_ket_red	1.90
PF00455	DeoRC	1.90
PF02746	MR_MLE_N	1.90
PF07883	Cupin_2	1.90
PF13419	HAD_2	1.90
PF00201	UDPGT	0.95
PF13561	adh_short_C2	0.95
PF12680	SnoaL_2	0.95
PF08220	HTH_DeoR	0.95
PF00353	HemolysinCabind	0.95
PF04542	Sigma70_r2	0.95
PF04229	GrpB	0.95
PF03492	Methyltransf_7	0.95
PF00403	HMA	0.95
PF04203	Sortase	0.95
PF13551	HTH_29	0.95
PF10049	DUF2283	0.95
PF01895	PhoU	0.95
PF00296	Bac_luciferase	0.95
PF03033	Glyco_transf_28	0.95
PF13424	TPR_12	0.95
PF13358	DDE_3	0.95
PF04893	Yip1	0.95
PF03636	Glyco_hydro_65N	0.95
PF00857	Isochorismatase	0.95
PF13378	MR_MLE_C	0.95
PF10518	TAT_signal	0.95
PF03793	PASTA	0.95
PF01844	HNH	0.95
PF13473	Cupredoxin_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	5.71
COG1349	DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family	Transcription [K]	3.81
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	3.81
COG3558	Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily	Function unknown [S]	2.86
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	1.90
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.90
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.95
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.95
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.95
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.95
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.95
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.95
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.95
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.95
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.95
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.95
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.90 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.90 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.90 %
Unclassified	root	N/A	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	18.10 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	18.10 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	18.10 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	5.71 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	3.81 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.95 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.10 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	5.71 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	2.86 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.90 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	0.95 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118815754	Not Available	600	Open in IMG/M
3300002568\|C688J35102_120988905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	9581	Open in IMG/M
3300005562\|Ga0058697_10007794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3476	Open in IMG/M
3300005562\|Ga0058697_10168045	Not Available	971	Open in IMG/M
3300007004\|Ga0079218_12587459	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300007790\|Ga0105679_10012706	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1157	Open in IMG/M
3300007790\|Ga0105679_10185226	Not Available	1256	Open in IMG/M
3300007790\|Ga0105679_10211043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300007790\|Ga0105679_10399428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1094	Open in IMG/M
3300009789\|Ga0126307_10002824	All Organisms → cellular organisms → Bacteria	11781	Open in IMG/M
3300009789\|Ga0126307_10016377	All Organisms → cellular organisms → Bacteria	5509	Open in IMG/M
3300009789\|Ga0126307_10016925	All Organisms → cellular organisms → Bacteria	5424	Open in IMG/M
3300009789\|Ga0126307_10022927	All Organisms → cellular organisms → Bacteria	4736	Open in IMG/M
3300009789\|Ga0126307_10028493	All Organisms → cellular organisms → Bacteria	4281	Open in IMG/M
3300009789\|Ga0126307_10035463	All Organisms → cellular organisms → Bacteria	3855	Open in IMG/M
3300009789\|Ga0126307_10075730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2651	Open in IMG/M
3300009789\|Ga0126307_10157210	Not Available	1821	Open in IMG/M
3300009789\|Ga0126307_10185697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	1667	Open in IMG/M
3300009789\|Ga0126307_10205026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1582	Open in IMG/M
3300009789\|Ga0126307_10213585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	1548	Open in IMG/M
3300009789\|Ga0126307_10317251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1254	Open in IMG/M
3300009789\|Ga0126307_10487754	All Organisms → cellular organisms → Bacteria → Terrabacteria group	994	Open in IMG/M
3300009789\|Ga0126307_11328642	Not Available	582	Open in IMG/M
3300009840\|Ga0126313_10027885	All Organisms → cellular organisms → Bacteria	3841	Open in IMG/M
3300009840\|Ga0126313_10046360	All Organisms → cellular organisms → Bacteria	3048	Open in IMG/M
3300009840\|Ga0126313_10132671	Not Available	1865	Open in IMG/M
3300009840\|Ga0126313_10133195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	1862	Open in IMG/M
3300009840\|Ga0126313_10182846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1602	Open in IMG/M
3300009840\|Ga0126313_10323946	Not Available	1209	Open in IMG/M
3300009840\|Ga0126313_10554009	Not Available	924	Open in IMG/M
3300009840\|Ga0126313_11181105	Not Available	630	Open in IMG/M
3300010036\|Ga0126305_10025930	All Organisms → cellular organisms → Bacteria	3145	Open in IMG/M
3300010036\|Ga0126305_10054395	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300010036\|Ga0126305_10079459	Not Available	1929	Open in IMG/M
3300010036\|Ga0126305_10126801	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300010036\|Ga0126305_10284033	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1071	Open in IMG/M
3300010037\|Ga0126304_10295954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1071	Open in IMG/M
3300010037\|Ga0126304_10633711	Not Available	721	Open in IMG/M
3300010038\|Ga0126315_10196566	Not Available	1213	Open in IMG/M
3300010038\|Ga0126315_10219791	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300010039\|Ga0126309_10103806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1467	Open in IMG/M
3300010039\|Ga0126309_10133864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1314	Open in IMG/M
3300010039\|Ga0126309_10228560	Not Available	1043	Open in IMG/M
3300010039\|Ga0126309_10288761	All Organisms → cellular organisms → Bacteria → Terrabacteria group	944	Open in IMG/M
3300010039\|Ga0126309_10999707	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300010040\|Ga0126308_10090286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1860	Open in IMG/M
3300010040\|Ga0126308_10091386	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1849	Open in IMG/M
3300010040\|Ga0126308_10624174	Not Available	736	Open in IMG/M
3300010040\|Ga0126308_10647604	Not Available	723	Open in IMG/M
3300010040\|Ga0126308_10771595	Not Available	664	Open in IMG/M
3300010040\|Ga0126308_11368762	Not Available	502	Open in IMG/M
3300010041\|Ga0126312_10069027	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300010041\|Ga0126312_10361045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1030	Open in IMG/M
3300010041\|Ga0126312_10830054	Not Available	671	Open in IMG/M
3300010041\|Ga0126312_10933578	Not Available	633	Open in IMG/M
3300010041\|Ga0126312_10944505	Not Available	630	Open in IMG/M
3300010042\|Ga0126314_10126721	Not Available	1761	Open in IMG/M
3300010042\|Ga0126314_10154942	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1597	Open in IMG/M
3300010042\|Ga0126314_10844028	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300010042\|Ga0126314_11017939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300010042\|Ga0126314_11505704	Not Available	505	Open in IMG/M
3300010044\|Ga0126310_10002271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7720	Open in IMG/M
3300010044\|Ga0126310_10002741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7156	Open in IMG/M
3300010044\|Ga0126310_10169761	Not Available	1407	Open in IMG/M
3300010044\|Ga0126310_10406109	Not Available	971	Open in IMG/M
3300010044\|Ga0126310_10473548	Not Available	909	Open in IMG/M
3300010044\|Ga0126310_11261651	Not Available	596	Open in IMG/M
3300010044\|Ga0126310_11365705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	576	Open in IMG/M
3300010044\|Ga0126310_11696914	Not Available	524	Open in IMG/M
3300010045\|Ga0126311_10620226	Not Available	858	Open in IMG/M
3300010045\|Ga0126311_11255274	Not Available	614	Open in IMG/M
3300010045\|Ga0126311_11669131	Not Available	537	Open in IMG/M
3300010166\|Ga0126306_10002129	All Organisms → cellular organisms → Bacteria	11051	Open in IMG/M
3300010166\|Ga0126306_10028467	All Organisms → cellular organisms → Bacteria	3758	Open in IMG/M
3300010166\|Ga0126306_10100512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2090	Open in IMG/M
3300010166\|Ga0126306_10293506	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300010166\|Ga0126306_11035707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	670	Open in IMG/M
3300012678\|Ga0136615_10302201	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300014488\|Ga0182001_10132628	Not Available	824	Open in IMG/M
3300014488\|Ga0182001_10254743	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300017789\|Ga0136617_10205722	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300018465\|Ga0190269_10913685	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300018466\|Ga0190268_10155811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1175	Open in IMG/M
3300018466\|Ga0190268_10492015	Not Available	829	Open in IMG/M
3300018719\|Ga0193596_1055809	Not Available	569	Open in IMG/M
3300018875\|Ga0193608_1062677	Not Available	824	Open in IMG/M
3300018875\|Ga0193608_1069611	All Organisms → cellular organisms → Bacteria → Terrabacteria group	777	Open in IMG/M
3300018877\|Ga0193600_1067480	All Organisms → cellular organisms → Bacteria → Terrabacteria group	861	Open in IMG/M
3300018906\|Ga0193609_1027021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1873	Open in IMG/M
3300018918\|Ga0193616_1137427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	673	Open in IMG/M
3300018920\|Ga0190273_10004963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5153	Open in IMG/M
3300018920\|Ga0190273_10589937	Not Available	836	Open in IMG/M
3300018933\|Ga0193614_1126948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	705	Open in IMG/M
3300019377\|Ga0190264_10000753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	6331	Open in IMG/M
3300019377\|Ga0190264_10009560	All Organisms → cellular organisms → Bacteria	2819	Open in IMG/M
3300031731\|Ga0307405_10650553	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031852\|Ga0307410_10926578	Not Available	748	Open in IMG/M
3300031995\|Ga0307409_100100926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2393	Open in IMG/M
3300031995\|Ga0307409_101831121	All Organisms → cellular organisms → Bacteria → Terrabacteria group	636	Open in IMG/M
3300032002\|Ga0307416_101123514	All Organisms → cellular organisms → Bacteria → Terrabacteria group	891	Open in IMG/M
3300032126\|Ga0307415_102562915	Not Available	503	Open in IMG/M
3300032159\|Ga0268251_10017587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2083	Open in IMG/M
3300034131\|Ga0334911_035050	Not Available	710	Open in IMG/M
3300034132\|Ga0334915_051231	Not Available	834	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.43%
Host-Associated	Host-Associated	8.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.52%
Plants	Host-Associated → Plants	8.57%
Aquatic	Environmental → Aquatic	1.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.71%
Phylloplane	Host-Associated → Plants → Phylloplane	2.86%
Freshwater	Environmental → Aquatic → Freshwater	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.24%
Sand	Environmental → Terrestrial → Soil → Sand	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.86%
Ice	Environmental → Aquatic → Freshwater → Ice	1.90%
Loam	Environmental → Terrestrial → Soil → Loam	1.90%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	73.33%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.95%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	64.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	6.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	4.76%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.86%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.95%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018719	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018906	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1188157541	3300002568	Soil	MNEEEIRQRVKEILSKQDLGHTLTTQEEMILAFAYYAAGEQAMRMWDGSEPKVSE*
C688J35102_1209889058	3300002568	Soil	MTEEEIRQRVKEILHKRDIGDALTSQEEAILAYAYFAAGEQAVKMKVGTDAETDE*
Ga0058697_100077943	3300005562	Agave	MTEEEIRERVKEILLKQSLGEPLTSQEERILAYAHYAAGEQAVRIWVQPDIEAAD*
Ga0058697_101680452	3300005562	Agave	MNEEEIRQRVKEILWKQNLGDTLTSQEETILAFAYYAAGEQAVRMWAGSEPEVGERGSSLP*
Ga0079218_125874592	3300007004	Agricultural Soil	MIEEEIRQRVDEILLKRVLRNDLSSQEERILAYAHYAAGEQAVRMKVGPDTETGE*
Ga0105679_100127062	3300007790	Soil	MNEEEIWQRVKEILSKQNLGHTLTSQEETILAFAYYAAGEQAVRMWAGSEPEVSD*
Ga0105679_101852261	3300007790	Soil	IRERVKEILLKQADGEDLTLQEETILAYAYFAAGEQAVRIWVRPDVEAAE*
Ga0105679_102110432	3300007790	Soil	MTEGEIRQRVKEILLKRDRGENLDSQEETILAYAHYAAGEQAVRMWSPLDSESGD*
Ga0105679_103584682	3300007790	Soil	MTEEEIRERVKEILLKQAEGNDLTLQEETILAYAYYAAGEQAV
Ga0105679_103994282	3300007790	Soil	MTEEQIRERVKEILLKQSLGEDLTSQEETILAYAHYAAGEQAVRVWVRPDTEAAE*
Ga0126307_1000282412	3300009789	Serpentine Soil	VTEEEIRRRVEEILLKRDLGDDLTSQEETILAYAHYAAGEQRVRMRTRSDAEAGE*
Ga0126307_100163773	3300009789	Serpentine Soil	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYTHYAAGEQAVRMKVGPDTEIGE*
Ga0126307_100169252	3300009789	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRTWDVSELEASE*
Ga0126307_100229275	3300009789	Serpentine Soil	MAEEEIRQGVRAILLKRDIGHELTVQGEMILAYAYYAAGEQEVRMWVGLDTETRG*
Ga0126307_100284933	3300009789	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTTREEMIPAFAYYAAGEQAVRMWDGSEPEIRK*
Ga0126307_100354635	3300009789	Serpentine Soil	MTEEEIMQRVKEILHKRAIGDDLTSQEETILAYAYFAAGEQAVTMREGSDTEKGN*
Ga0126307_100757302	3300009789	Serpentine Soil	MNEEELGQRVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWNGSKPEASE*
Ga0126307_101572103	3300009789	Serpentine Soil	MTEEEIRQRVKEILLKRVLGNDLTSQEERILAYTHYAADEQAVRMKVRPNTETAE*
Ga0126307_101856973	3300009789	Serpentine Soil	MTEEEIRQQVKGILHKRDIGDDLTSQEEKILAYTYYAAGEQAVRMKVGPDTETGE*
Ga0126307_102050262	3300009789	Serpentine Soil	MTEEEIRERVKEILLKQALGEDLTPQEETILAYAHYAAGEQAVRIWVRPDVEAAE*
Ga0126307_102135852	3300009789	Serpentine Soil	MTEEEIRQQVKQILHKRDIGDDLTSQEERILAYAYYAAGEQAVRMKVGPDTETGE*
Ga0126307_103172513	3300009789	Serpentine Soil	MTEEEIRERVKEILLKQSLGEALTSQEETILAYAHYAAGEQAVRIWVQPDIEAAE*
Ga0126307_104877542	3300009789	Serpentine Soil	MNEEEIRERVNEILLKQARGEDLTLQEETILAYAHYAAGEQAVRIWVRPDVEAAE*
Ga0126307_113286421	3300009789	Serpentine Soil	MNEEEIRQRVREILSKQDRGYTLTSQEETILAFAYYAAGEQAVRMWAGSEPEVGG*
Ga0126313_100278856	3300009840	Serpentine Soil	MTEEEIRQRVEEILLKRDLGGDLTPQEERILAYAYYAAGEQALRIWVRPDTETGE*
Ga0126313_100463602	3300009840	Serpentine Soil	MNEEEIRQWVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWDGSEPEASE*
Ga0126313_101326712	3300009840	Serpentine Soil	MTEEEIRQRVKEILLKRVLGNDLTSQEERILAYTHYAADEQAVRMKVRPNTEIAE*
Ga0126313_101331953	3300009840	Serpentine Soil	MTEEEIRQQVKGILHKRDIGDDLTSQEEKILAYAYYAAGEQAVRMKVGPDTETGE*
Ga0126313_101828461	3300009840	Serpentine Soil	MAEEEIRQGVREILLKRDIGHELTVQGEMILAYAYYAAGEQEVRMWVGLDTETRG*
Ga0126313_103239461	3300009840	Serpentine Soil	MTEEEIRQRVKEILRKRDVGDDLTPQEETILAYAYFAAAEQAVRRMQVGSDAETGE*
Ga0126313_105540092	3300009840	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTSQEQTILAFAYYAAGEQAVRTWDVSEPEASE*
Ga0126313_111811052	3300009840	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWDGSEPEASE*
Ga0126305_100259302	3300010036	Serpentine Soil	VTEEEIRQRVKEILLKRDLGKDLTSQEERILAYTHYAAGEQAVRMKVGPDTETGE*
Ga0126305_100543952	3300010036	Serpentine Soil	MNEEEIRQWVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRM*
Ga0126305_100794591	3300010036	Serpentine Soil	IRQWVKEILSKQNLGHTLTTREEMIPAFAYYAAGEQAVRMWDGSEPEIRK*
Ga0126305_101268012	3300010036	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWNGSEPGASE*
Ga0126305_102840331	3300010036	Serpentine Soil	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYTHYAAGEQAVRMKVGPDTEI
Ga0126304_102959542	3300010037	Serpentine Soil	MNEEEISQRVHEILSKRNLGHTLTSQEQTILAFAYYAAGEQAVRMWDGSEPEASE*
Ga0126304_106337112	3300010037	Serpentine Soil	MTEEEIRERVKEILLKQSLGEALTSQEETILAYAHYAAGEQAVRIWV
Ga0126315_101965661	3300010038	Serpentine Soil	MNEEEIRQRVKEILSKQHVGHTLTSQEETILAFAYYAAGEQAVRMWDGSEPEASE*
Ga0126315_102197912	3300010038	Serpentine Soil	MNEEEIRQWVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWDGSEPEIRK*
Ga0126309_101038063	3300010039	Serpentine Soil	MNGEEIRKRVKEILSKQNLGHTLTTQEEMILAFAYYAAGEQAVRMWDGSEPEVSE*
Ga0126309_101338641	3300010039	Serpentine Soil	MTEEEIRQRVKEILLKRDLGKDLTSQEERILAYTHYAAGEQAVRMKVGPDTETGE*
Ga0126309_102285603	3300010039	Serpentine Soil	MTEEEIRERVKEILVKQALGEDLTSQEETILAYAHYAAGEQAVRIWVRPDIEAAE*
Ga0126309_102887612	3300010039	Serpentine Soil	MNEEEIRERVNEILLKQARGEDLTPQEEIILAYAHYAAGEQAVRIWVRPDVEAAE*
Ga0126309_109997071	3300010039	Serpentine Soil	MTEEEIKERVKEILVKQALGEDLTQQEETILAYAHYAAGEQAVRVWVRPDIEAAE*
Ga0126308_100902862	3300010040	Serpentine Soil	MTEEEIRQRVKEILLKRDLENDLISQEERILAYTHYAAGEQAVRMKVGPDTETGE*
Ga0126308_100913861	3300010040	Serpentine Soil	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYTHYAAGEQAVRMKVGPD
Ga0126308_106241742	3300010040	Serpentine Soil	MTEEEIMQRVKEILHKRAIGDDLTSQEETILAYAHYAAGEQAVKMGVLSDTKISR*
Ga0126308_106476041	3300010040	Serpentine Soil	MTEEEIRQQVKGILHKRDIGDDLTSQEERILAYAYYAAGEQAVRMKVGPDTETGE*
Ga0126308_107715951	3300010040	Serpentine Soil	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYTHYAAGEQAVRMKVGPDTEPGE*
Ga0126308_113687621	3300010040	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHALTTQEETILAFAYYAAGEQAVRMWDGSEPEASE*
Ga0126312_100690273	3300010041	Serpentine Soil	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYTHYAAGEQAVRMKVGPDTETGE*
Ga0126312_103610452	3300010041	Serpentine Soil	MTEEEIRQRVKEIVLKQDVRNELTSQEETILAYAYYAAGQQAVRMWVGPDIETGK*
Ga0126312_108300541	3300010041	Serpentine Soil	DYTEMLIDWRCSEAIPHTRAMTEEEIRQRVKEILLKRDLGYDLTSQEERILAYTHYAAGEQAVRMKVEPDTETGE*
Ga0126312_109335781	3300010041	Serpentine Soil	MNEEEIRQRVREILSKQDRGYTLTSQEETILAFAYYAADEQAVRMWAGSEPEVGG*
Ga0126312_109445051	3300010041	Serpentine Soil	MTEEEIRERVKEILRKQAHGEDLSLQEETILAYAYHAAGEQSVRMWVRPDVEAAQ*
Ga0126314_101267211	3300010042	Serpentine Soil	MNEEEIRQWVKEILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWDGSEPE
Ga0126314_101549423	3300010042	Serpentine Soil	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYTHYAAGEQAVRMKVGPDTEIGD*
Ga0126314_108440283	3300010042	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLSTQEEMILAFAYYAAGEQAVRMWDGSEPETSE*
Ga0126314_110179391	3300010042	Serpentine Soil	EILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWDGSEPEIRK*
Ga0126314_115057041	3300010042	Serpentine Soil	EILSKQNLGHTLTTQEETILAFAYYAAGEQAVRMWDGSEPEASE*
Ga0126310_100022714	3300010044	Serpentine Soil	MTEEEIRERVKEILLKQALGESLTSKEETILAYAHYAAGEQAVRIWVRPDTGAAE*
Ga0126310_100027411	3300010044	Serpentine Soil	MTEEEIRRRVKEILHKRDIGNDLTPQEEAILAYAYFAAGEQAVMIKVDPDTETGE*
Ga0126310_101697612	3300010044	Serpentine Soil	MTEEEIRRRVKEILHKRDVGDDLTPQEEAILAYAYFAAGEQAVGMPVGADAETGE*
Ga0126310_104061092	3300010044	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTSQEETILAFAYYAAGEQAVRMWAGSEPEVGE*
Ga0126310_104735481	3300010044	Serpentine Soil	MTEEEIRQRVKEILLKRDLGNDLTSQEERILAYAHYAAGEQAVRMKVGPDTETGE*
Ga0126310_112616511	3300010044	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLSTQEEMILAFAYYAAGEQAVRMWAGSEPEVGE*
Ga0126310_113657051	3300010044	Serpentine Soil	MNEEEIRQRVKEILSKQTLGQTLTSQEETILAFAYYAAGEQAVRMW
Ga0126310_116969141	3300010044	Serpentine Soil	MNEEEISQRVHEILSKRNLGHTLTSQEETILAFAYYAAGEQVVRMWAGSEPEVCD*
Ga0126311_106202262	3300010045	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTSQEQTILAFAYYAAGEQAVRMWDGSEPEASE*
Ga0126311_112552741	3300010045	Serpentine Soil	MTEEEIRRRVKEILHKRDIGNDLTPQEEAILAYAYFAAGEQAVRMKVDPDTETGE*
Ga0126311_116691311	3300010045	Serpentine Soil	VTEEEIRQRVKEILLKRDLGYDLTSQEERILAYTHYAAGEQAVRMKVEPDTETGE*
Ga0126306_100021292	3300010166	Serpentine Soil	MNAEEIRQRVMEILSKQNLGDTLTSQEETILAFAYYAAGEQAVRMWAGSEPEVGE*
Ga0126306_100284672	3300010166	Serpentine Soil	MTEDEIRQRVEEILLKRDLGGDLTPQEERILAYAYYAAGEQALRIWVRPDTETGE*
Ga0126306_101005123	3300010166	Serpentine Soil	MTEEEIRQQVKQILHKRDIGDDLTSQEERILAYAYYAAGEQGVRMKVGPDTETGE*
Ga0126306_102935061	3300010166	Serpentine Soil	MTEEEIMQRVKEILHKRAMGDELTSQEETILAYAYFAAGEQAVTMWVGSGTEKDN*
Ga0126306_110357071	3300010166	Serpentine Soil	MNEEEIRQRVKEILSKQNLGHTLTAREEMIPAFAYYAAGEQAVRMWDGSEPEIRK*
Ga0136615_103022012	3300012678	Polar Desert Sand	MNEREIRARVEEILDKRDRGEKLTQKEETILAFAHYAAGEQRVRVWVDPDAGR*
Ga0182001_101326282	3300014488	Soil	MTEEEIRERVKEILLKQSLGEDLTSREETILAYAHYAAGEQAVRVWVRPDTEAAE*
Ga0182001_102547432	3300014488	Soil	VRLCPHTRAITEEEISQRVKEILLKRVLGNDLSSQEERILAYTHYAADEEAVRMKVRPNTETAE*
Ga0136617_102057223	3300017789	Polar Desert Sand	MNEREIRARVEEILDKRDRGEKLTQKEETILAFAHYAAGEQRVRVWVDPDIGK
Ga0190269_109136851	3300018465	Soil	MNEEEIRQRVKEILSKQNLGHTLTTREETILAFAYYGAGEQAVSMWDGSEPEISE
Ga0190268_101558111	3300018466	Soil	MNEEEIRQRVKEILWKENLGYTLTTQEEMILAFAYYAAGEQAVRMWDGSEPEVSE
Ga0190268_104920151	3300018466	Soil	MTEEEIRQRVKEILLKRDLGYDLTSQEERILAYTHYAAGEQAVRMKVGSDTETGE
Ga0193596_10558092	3300018719	Soil	MNEEEIWQRVKEILSKQNLGHTLTSQEETIIAFAYYAAGEQAVRMWAGSEPEVSD
Ga0193608_10626772	3300018875	Soil	MNEEEIWQRVKEILSKQNLGHTLTSQEETIIAFAYYAAGEQ
Ga0193608_10696112	3300018875	Soil	MNEEEIWQRVKEILSKQNLGHTLTSQEETILAFAYYAAGEQAVRMWAGSEPEVSD
Ga0193600_10674802	3300018877	Soil	GHTLTSQEETILAFAYYAAGEQAVRMWAGSEPEVSD
Ga0193609_10270211	3300018906	Soil	MNEEEIWQRVKEILSKQNLGHTLTSQEETILAFAAGEQAVRMWAGSEPEVSD
Ga0193616_11374271	3300018918	Soil	MTEEEIRQRVTEILLKRDTGNDLTSQEETILAYGYYAAGEQQVRMQEEP
Ga0190273_100049638	3300018920	Soil	MPYPHTRCMNEEEIRQRVKEILWKENLGYTLTTQEEMILAFAYYAAGEQAVRMWDGSEPEVSE
Ga0190273_105899373	3300018920	Soil	MTEEEIRQRVKEILLKRDLEKVLTSQEERILAYTHYAAGEQAVRMKAGPDTETGE
Ga0193614_11269482	3300018933	Soil	MTEEEIRQRVTEILLKRDTGDKLTSQEETILAYGYYAAGEQQVRMQEEPTPT
Ga0190264_100007531	3300019377	Soil	MTEEEIRQRVKEILLKRDLGYDLSSQEERILAYTHYAAGEQAVRMKVEPDTETGE
Ga0190264_100095602	3300019377	Soil	MQRVKEILHKRAIGDDLTSQEETTLAYTYFAAGEQAVTMRVGSDTEKGN
Ga0307405_106505531	3300031731	Rhizosphere	RVNEILLKQARGEDLTLQEETILAYAHYAAGEQAVRIWVRPDVEAAE
Ga0307410_109265782	3300031852	Rhizosphere	MTEEEIRERVKEILLKQAEGEDLTLQEETILAYAYYAAGEQSVRMWGRPDPGAGE
Ga0307409_1001009261	3300031995	Rhizosphere	MTEEEIRQRVKEILLKRVLGNDLTSQEERILAYTHYAADEQAVRMKVRPNTETAE
Ga0307409_1018311212	3300031995	Rhizosphere	MTEEEIRERVKEILLKQARGENLTLQEETILAYAYYAAGEQSVRIWVRPDVEAAE
Ga0307416_1011235142	3300032002	Rhizosphere	MNEEEIRERVNEILLKQARGEDLTLQEETILAYAHYAAGEQAVRIWVRPDVEAAE
Ga0307415_1025629151	3300032126	Rhizosphere	MTEEEIRERVKEILLKQAHGYDLTLQEETILAYAYYAAGEQSVRMWGRPDPGAGE
Ga0268251_100175873	3300032159	Agave	MTEEEIRERVKEILLKQSLGEPLTSQEERILAYAHYAAGEQAVRIWVQPDIEAAD
Ga0334911_035050_153_320	3300034131	Sub-Biocrust Soil	MTEEEIRQRVKEILLKRDLGYDLTSQEERILAYTHYAAGEQAVRMKAGPDTETEE
Ga0334915_051231_1_168	3300034132	Hypolithic Biocrust	MTEEEIRQRVKEILLKRDLGYDLTSQEQRILAYTHYAAGEQAVRMKAGPDTETGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095004

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences