Basic Information | |
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Family ID | F095165 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 50 residues |
Representative Sequence | MTSNYSPQNDFPDNDDWDYIFKLMILIALLIVALAVALIVLTPEIFNYLINL |
Number of Associated Samples | 57 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 35.24 % |
% of genes from short scaffolds (< 2000 bps) | 80.00 % |
Associated GOLD sequencing projects | 40 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (66.667 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (61.905 % of family members) |
Environment Ontology (ENVO) | Unclassified (77.143 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (74.286 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 63.46% β-sheet: 0.00% Coil/Unstructured: 36.54% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Sediment Deep Subsurface Seawater Aqueous Seawater Freshwater To Marine Saline Gradient Estuarine Pelagic Marine Marine Seawater Marine Harbor Saline Water And Sediment Soil |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSpr2010_100222173 | 3300000116 | Marine | MASNYSPQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLINL* |
DelMOSpr2010_100697683 | 3300000116 | Marine | MTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL* |
Ga0074242_104601242 | 3300005346 | Saline Water And Sediment | MITNYSPENNFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLITL* |
Ga0074649_10363543 | 3300005613 | Saline Water And Sediment | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL* |
Ga0074649_10636132 | 3300005613 | Saline Water And Sediment | MITNYSPENNFPNNDDWDYIFKLMIVIAVLITLLAFALIFLTPEIFNYLITL* |
Ga0075474_100020978 | 3300006025 | Aqueous | MTSNYSPQNDFPNNEDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL* |
Ga0075462_101455052 | 3300006027 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL* |
Ga0075462_101970542 | 3300006027 | Aqueous | MTSNYSPQNDFPNNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL* |
Ga0075466_11559922 | 3300006029 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMITISILIVALAVALIVLTPEIFNYLITL* |
Ga0070749_102030693 | 3300006802 | Aqueous | QKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR* |
Ga0070749_102468653 | 3300006802 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL* |
Ga0070749_103341123 | 3300006802 | Aqueous | MASNYSPQNDFPDNDDWDYIFKLMITILLLIVALTVALIATPEIFNYLITL* |
Ga0070749_105343232 | 3300006802 | Aqueous | MTSNYSPQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL* |
Ga0070749_107247822 | 3300006802 | Aqueous | QKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL* |
Ga0070754_101356912 | 3300006810 | Aqueous | MTSNYSPQNDFPNNEDWDYIFKLMILIALLITALAVALIGLTPEIFNYLINL* |
Ga0070754_102251423 | 3300006810 | Aqueous | MITNYSTQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL* |
Ga0070754_103230392 | 3300006810 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL* |
Ga0070754_105214631 | 3300006810 | Aqueous | FPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL* |
Ga0070750_1000172918 | 3300006916 | Aqueous | MISNYSPQNDFPNNDDWDYLFKLMILIALLITLFAVAIILLTPEIFNYLITL* |
Ga0070750_101258923 | 3300006916 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR* |
Ga0070750_102633641 | 3300006916 | Aqueous | DDWDYIFKLMILIALLITALAVALIVLTPEIFNYLITL* |
Ga0070746_104178272 | 3300006919 | Aqueous | MITNYSTQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL* |
Ga0070748_11192173 | 3300006920 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAFALIVLTPEIFNYLINL* |
Ga0070745_11684412 | 3300007344 | Aqueous | MITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL* |
Ga0070753_10216771 | 3300007346 | Aqueous | ISMTSNYSPQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL* |
Ga0070753_12895291 | 3300007346 | Aqueous | NISMTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL* |
Ga0099851_10143072 | 3300007538 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALILLTPEIFNYLITL* |
Ga0099851_10294095 | 3300007538 | Aqueous | PDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL* |
Ga0099851_10327423 | 3300007538 | Aqueous | MITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL* |
Ga0099851_10874524 | 3300007538 | Aqueous | DFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN* |
Ga0099851_11572103 | 3300007538 | Aqueous | MTSNYSPQNDFPDNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL* |
Ga0099849_11622512 | 3300007539 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL* |
Ga0099847_10695433 | 3300007540 | Aqueous | PDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN* |
Ga0099847_10784241 | 3300007540 | Aqueous | FPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLITLKIN* |
Ga0099846_10509511 | 3300007542 | Aqueous | KMITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL* |
Ga0099846_10973111 | 3300007542 | Aqueous | PDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL* |
Ga0099846_11636933 | 3300007542 | Aqueous | MITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVALIVLTPEIFN |
Ga0099846_12885182 | 3300007542 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMILIALLITALAVALILLTPEIFNYLINL* |
Ga0070751_10632304 | 3300007640 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL* |
Ga0070751_12237771 | 3300007640 | Aqueous | MITNYSTQNDFPNNDDWDYIFKLMITISLLIVSLAVALIVLTPEIFNYLINL* |
Ga0099850_10756423 | 3300007960 | Aqueous | MTSNYSPQNDFPDNNDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL* |
Ga0099850_14072042 | 3300007960 | Aqueous | LKNYKMITNYSTQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL* |
Ga0102814_107968402 | 3300009079 | Estuarine | MINNYSTENDFPNNDDWDYIFKLMITILLLIVALSVALIVLTPEIFNYLITL* |
Ga0114918_103587901 | 3300009149 | Deep Subsurface | NDFPNNDDWDYIFKLMILIAFLITALAFALVFFSPEIYTYILTLITN* |
Ga0114918_104640312 | 3300009149 | Deep Subsurface | MISNYSPENDFPNNDDWDFVFKLLILLAILIAALAFATIILTPEIFNYLINL* |
Ga0114918_107192241 | 3300009149 | Deep Subsurface | PENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLITLKL* |
Ga0115571_11015942 | 3300009495 | Pelagic Marine | MINNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL* |
Ga0136655_12457502 | 3300010316 | Freshwater To Marine Saline Gradient | ILINILMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAFALILLTPEIFNYLINL* |
Ga0129324_101758222 | 3300010368 | Freshwater To Marine Saline Gradient | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAFALILLTPEIFNYLINL* |
Ga0180120_101788021 | 3300017697 | Freshwater To Marine Saline Gradient | MTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAV |
Ga0180120_101861021 | 3300017697 | Freshwater To Marine Saline Gradient | PDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN |
Ga0180120_102056613 | 3300017697 | Freshwater To Marine Saline Gradient | MTSNYSPQKDFPNNEDWDYIFKLMILIALLITALAVALILLTPEIFNYLINL |
Ga0180120_103630703 | 3300017697 | Freshwater To Marine Saline Gradient | PDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL |
Ga0213861_100259927 | 3300021378 | Seawater | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLINL |
Ga0213861_105054622 | 3300021378 | Seawater | MTSNYSPQNDFPNNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLITLKIN |
Ga0213868_101820794 | 3300021389 | Seawater | MTSNYSPQNDFPDNDDWDYIFKLMILIALLIVALAVALIVLTPEIFNYLINL |
Ga0196883_100001310 | 3300022050 | Aqueous | MTSNYSPQNDFPNNEDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL |
Ga0212030_10189883 | 3300022053 | Aqueous | MITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL |
Ga0212030_10252022 | 3300022053 | Aqueous | MTSNYSPQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL |
Ga0212029_10354782 | 3300022063 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL |
Ga0212024_10099724 | 3300022065 | Aqueous | SNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR |
Ga0212021_10048733 | 3300022068 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR |
Ga0196903_100038816 | 3300022169 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALILLTPEIFNYLITL |
Ga0196901_10341016 | 3300022200 | Aqueous | MTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN |
Ga0196901_10866073 | 3300022200 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLINL |
Ga0196901_11951753 | 3300022200 | Aqueous | SNYSPQNDFPDNNDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL |
(restricted) Ga0233412_101517493 | 3300023210 | Seawater | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL |
(restricted) Ga0255040_102011223 | 3300024059 | Seawater | MTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL |
(restricted) Ga0255039_100276603 | 3300024062 | Seawater | MTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL |
Ga0210003_10630483 | 3300024262 | Deep Subsurface | MISNYTPENDFPNNDDWDYIFKLMILIAFLITALAFALVFFSPEIYTYILTLITN |
Ga0210003_11021182 | 3300024262 | Deep Subsurface | MISNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL |
(restricted) Ga0255046_102830112 | 3300024519 | Seawater | MISNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL |
Ga0208303_10052655 | 3300025543 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN |
Ga0208303_10141773 | 3300025543 | Aqueous | MTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL |
Ga0208303_10452581 | 3300025543 | Aqueous | NDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLITLKIN |
Ga0208303_10629491 | 3300025543 | Aqueous | NDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLINL |
Ga0208303_10734563 | 3300025543 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLI |
Ga0209716_11728912 | 3300025626 | Pelagic Marine | MINNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL |
Ga0208160_10104216 | 3300025647 | Aqueous | KLLTILINISMTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN |
Ga0208160_10211514 | 3300025647 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLINL |
Ga0208160_10248975 | 3300025647 | Aqueous | ITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL |
Ga0208795_10212602 | 3300025655 | Aqueous | MTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN |
Ga0208899_100109827 | 3300025759 | Aqueous | MISNYSPQNDFPNNDDWDYLFKLMILIALLITLFAVAIILLTPEIFNYLITL |
Ga0208899_10424265 | 3300025759 | Aqueous | DYIFKLMITISLLIVALAVALIVLTPEIFNYLITL |
Ga0208899_12075732 | 3300025759 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL |
Ga0208767_10807673 | 3300025769 | Aqueous | MITNYSTQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL |
Ga0208645_10100454 | 3300025853 | Aqueous | MTSNYSPQNDFPDNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL |
Ga0208645_11674633 | 3300025853 | Aqueous | MTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL |
Ga0208644_11087752 | 3300025889 | Aqueous | MASNYSPQNDFPDNDDWDYIFKLMITILLLIVALTVALIATPEIFNYLITL |
Ga0209536_1008331251 | 3300027917 | Marine Sediment | NISMTSNYSPQNDFPDNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL |
(restricted) Ga0233413_101283741 | 3300027996 | Seawater | DDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL |
Ga0135226_10076063 | 3300029308 | Marine Harbor | MTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALGFATIILTPEIFNYLITL |
Ga0307380_104963583 | 3300031539 | Soil | QNDFPNNDDWDYIFKLMILIAILITLLSFALIFLTPEIFNYLINL |
Ga0307380_106419403 | 3300031539 | Soil | MISNYSPQNDFPNNDDWDYIFKLMILIAFLITALAFALVFFSPEIYTYILTLITN |
Ga0307380_108528061 | 3300031539 | Soil | ISNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPKIFNYLINL |
Ga0307379_104878073 | 3300031565 | Soil | MISNYSPQNDFPNNDDWDYIFKLMILIAILITLLSFALIFLTPEIFNYLINL |
Ga0307376_100716574 | 3300031578 | Soil | MISNYSPQNDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL |
Ga0307375_101954491 | 3300031669 | Soil | MISNYSPQNDFPNNDDWDYIFKLMILIAILITLLAFALIFLTP |
Ga0307375_103061653 | 3300031669 | Soil | MISNYSPQNDFPNNDDWDFVFKLLILLAILIATLAFATIILTPEIFNYLINL |
Ga0307375_105337891 | 3300031669 | Soil | SNYSPENDFPNNDDWDYIFKLMILISILITLLAFALIFLTPEIFNYLINL |
Ga0307377_101781954 | 3300031673 | Soil | MISNYSPQNDFPNNDDWDYIFKLMILIAILITLLAFALIFLT |
Ga0307377_104955663 | 3300031673 | Soil | MISNYSPENDFPNNDDWDYIFKLMILISILITLLAFALIFLTPEIFNYLINL |
Ga0307377_105344933 | 3300031673 | Soil | MISNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLITLKL |
Ga0348336_151129_538_690 | 3300034375 | Aqueous | MITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLIN |
Ga0348337_136162_610_720 | 3300034418 | Aqueous | MITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVA |
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