NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095185

Metagenome / Metatranscriptome Family F095185

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095185
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 109 residues
Representative Sequence MLNKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVAHDGAVIGDLASRLFTSSVPAEFFAVPSGTPPAGAERLREFARSEQVVRFMVYDA
Number of Associated Samples 82
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 47.62 %
% of genes near scaffold ends (potentially truncated) 98.10 %
% of genes from short scaffolds (< 2000 bps) 95.24 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.048 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(46.667 % of family members)
Environment Ontology (ENVO) Unclassified
(46.667 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.381 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 65.38%    β-sheet: 0.00%    Coil/Unstructured: 34.62%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00963Cohesin 25.71
PF04386SspB 4.76
PF00034Cytochrom_C 1.90
PF03401TctC 0.95
PF00033Cytochrome_B 0.95
PF08501Shikimate_dh_N 0.95
PF05593RHS_repeat 0.95
PF00378ECH_1 0.95
PF00440TetR_N 0.95
PF02630SCO1-SenC 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2969Stringent starvation protein B, binds SsrA peptidePosttranslational modification, protein turnover, chaperones [O] 4.76
COG0169Shikimate 5-dehydrogenaseAmino acid transport and metabolism [E] 0.95
COG1225PeroxiredoxinPosttranslational modification, protein turnover, chaperones [O] 0.95
COG1290Cytochrome b subunit of the bc complexEnergy production and conversion [C] 0.95
COG1999Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC familyPosttranslational modification, protein turnover, chaperones [O] 0.95
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.95
COG3209Uncharacterized conserved protein RhaS, contains 28 RHS repeatsGeneral function prediction only [R] 0.95

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.05 %
UnclassifiedrootN/A0.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002557|JGI25381J37097_1093603All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300002907|JGI25613J43889_10091769All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300002909|JGI25388J43891_1068943All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005174|Ga0066680_10428633All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium837Open in IMG/M
3300005176|Ga0066679_10159251All Organisms → cellular organisms → Bacteria1419Open in IMG/M
3300005178|Ga0066688_10208377All Organisms → cellular organisms → Bacteria1243Open in IMG/M
3300005180|Ga0066685_10940837All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium575Open in IMG/M
3300005186|Ga0066676_10186724All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1324Open in IMG/M
3300005186|Ga0066676_10657125All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas → Azohydromonas australica712Open in IMG/M
3300005447|Ga0066689_10332589All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium946Open in IMG/M
3300005451|Ga0066681_10676813All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium630Open in IMG/M
3300005549|Ga0070704_101054539All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium737Open in IMG/M
3300005555|Ga0066692_10143725All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1459Open in IMG/M
3300005557|Ga0066704_10389097All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium928Open in IMG/M
3300005559|Ga0066700_10110878All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1812Open in IMG/M
3300005575|Ga0066702_10083193All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1795Open in IMG/M
3300006800|Ga0066660_10161282All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1672Open in IMG/M
3300006903|Ga0075426_10117078All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1914Open in IMG/M
3300006903|Ga0075426_10299226All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300006904|Ga0075424_102344954All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300007076|Ga0075435_101256938All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300009012|Ga0066710_101770656All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300009038|Ga0099829_10318119All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300009038|Ga0099829_11158119All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300009089|Ga0099828_11906896All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium521Open in IMG/M
3300009137|Ga0066709_100553058All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1631Open in IMG/M
3300009137|Ga0066709_100750419All Organisms → cellular organisms → Bacteria1409Open in IMG/M
3300009137|Ga0066709_102265229All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium746Open in IMG/M
3300009143|Ga0099792_10256582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_101020Open in IMG/M
3300009162|Ga0075423_11682421All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300010329|Ga0134111_10226921All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium761Open in IMG/M
3300010362|Ga0126377_11194445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium831Open in IMG/M
3300011419|Ga0137446_1146778All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300011441|Ga0137452_1229275All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300012096|Ga0137389_10944669All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium739Open in IMG/M
3300012096|Ga0137389_11591296All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium549Open in IMG/M
3300012189|Ga0137388_10823846All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium860Open in IMG/M
3300012201|Ga0137365_11225122All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012203|Ga0137399_10121612All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2052Open in IMG/M
3300012203|Ga0137399_10659445All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium880Open in IMG/M
3300012206|Ga0137380_10251230All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1594Open in IMG/M
3300012206|Ga0137380_10395797All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1227Open in IMG/M
3300012207|Ga0137381_11537655All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium557Open in IMG/M
3300012209|Ga0137379_11695867All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium529Open in IMG/M
3300012210|Ga0137378_10447474All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300012211|Ga0137377_10533345All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300012285|Ga0137370_10451969All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium782Open in IMG/M
3300012349|Ga0137387_10039607All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium3089Open in IMG/M
3300012349|Ga0137387_10094839All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2071Open in IMG/M
3300012349|Ga0137387_10221541All Organisms → cellular organisms → Bacteria1360Open in IMG/M
3300012351|Ga0137386_10142027All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1715Open in IMG/M
3300012351|Ga0137386_10668173All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium747Open in IMG/M
3300012351|Ga0137386_11119439All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium555Open in IMG/M
3300012357|Ga0137384_10564073All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium931Open in IMG/M
3300012361|Ga0137360_10490425All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1045Open in IMG/M
3300012361|Ga0137360_10786872All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium818Open in IMG/M
3300012362|Ga0137361_10207289Not Available1775Open in IMG/M
3300012362|Ga0137361_10460563All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1168Open in IMG/M
3300012362|Ga0137361_10644940All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium969Open in IMG/M
3300012362|Ga0137361_10723510All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300012362|Ga0137361_11315577All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300012685|Ga0137397_11050016All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium597Open in IMG/M
3300012918|Ga0137396_11136225All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium556Open in IMG/M
3300012922|Ga0137394_10823262All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium777Open in IMG/M
3300012925|Ga0137419_10806348All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium768Open in IMG/M
3300012925|Ga0137419_11373517All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium596Open in IMG/M
3300012927|Ga0137416_10138178All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1890Open in IMG/M
3300012927|Ga0137416_11052047All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium729Open in IMG/M
3300012929|Ga0137404_11117166All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300012944|Ga0137410_10116989All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1996Open in IMG/M
3300012976|Ga0134076_10588845All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium518Open in IMG/M
3300015264|Ga0137403_10104441All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2838Open in IMG/M
3300015359|Ga0134085_10475384All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium569Open in IMG/M
3300018068|Ga0184636_1027081All Organisms → cellular organisms → Bacteria → Proteobacteria1795Open in IMG/M
3300020068|Ga0184649_1213733All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300021081|Ga0210379_10162754All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300021086|Ga0179596_10179154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_101023Open in IMG/M
3300026277|Ga0209350_1130559All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300026296|Ga0209235_1248815All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium552Open in IMG/M
3300026298|Ga0209236_1163861All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium916Open in IMG/M
3300026298|Ga0209236_1195717All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium774Open in IMG/M
3300026304|Ga0209240_1226965All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium567Open in IMG/M
3300026313|Ga0209761_1170803All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1001Open in IMG/M
3300026313|Ga0209761_1244601All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium717Open in IMG/M
3300026319|Ga0209647_1151633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10977Open in IMG/M
3300026320|Ga0209131_1079375All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1773Open in IMG/M
3300026324|Ga0209470_1377077All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300026332|Ga0209803_1152413All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium893Open in IMG/M
3300026335|Ga0209804_1054357All Organisms → cellular organisms → Bacteria1942Open in IMG/M
3300026342|Ga0209057_1179880All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium610Open in IMG/M
3300026529|Ga0209806_1290551All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium549Open in IMG/M
3300026532|Ga0209160_1024130All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3988Open in IMG/M
3300026532|Ga0209160_1067046All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1965Open in IMG/M
3300026538|Ga0209056_10349893All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium971Open in IMG/M
3300026540|Ga0209376_1221495All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium838Open in IMG/M
3300026557|Ga0179587_10381598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10917Open in IMG/M
3300027381|Ga0208983_1011536All Organisms → cellular organisms → Bacteria1683Open in IMG/M
3300027383|Ga0209213_1070571All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium653Open in IMG/M
3300027512|Ga0209179_1041884All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium966Open in IMG/M
3300027616|Ga0209106_1117296All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium597Open in IMG/M
3300027655|Ga0209388_1089607All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium884Open in IMG/M
3300027862|Ga0209701_10373764All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium801Open in IMG/M
3300027875|Ga0209283_10114719All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1771Open in IMG/M
3300028536|Ga0137415_10313920All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1371Open in IMG/M
3300028536|Ga0137415_10516805All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1002Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil46.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.95%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.24%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.86%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.86%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.90%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300011419Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300020068Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25381J37097_109360323300002557Grasslands SoilMLGKALMYRRLSVPQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVISDLASRLFTSSVPPEFFAVPSGAPPAGAERLREFARSEQVVRFMVYDAGGWVLWSDDASLTGHHF
JGI25613J43889_1009176913300002907Grasslands SoilMLGRIQALTRRRFSVSRRFALLSFLCVLAITVLICVASSAILRRQLVVHDGAVIGDLAARLFTSSVPAGFFAAPSGTAPAGAERLREFARSEQVVRFMV
JGI25388J43891_106894313300002909Grasslands SoilMLGKALMYRRLSVPQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVISDLASRLFTSSVPPEFFAVPSGAPPAGAERLREFARSEQVVRF
Ga0066680_1042863313300005174SoilVKSSKVMGAWMLSKLQALTLRRLSVSQRFALLSFFCVLAITILVCVASSAVLRRQLVAHDGAVIADLASRLFTSSVPAQFFAEPSGAPPAGAERLREFARSEQVVRFMVYDADGWVLWSD
Ga0066679_1015925123300005176SoilMLSKLQALTRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFSVPSGAPPAGAERLREFARSEQVVRFMVYDADGWVLW
Ga0066688_1020837723300005178SoilMLSKLQALTRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFSVPSGAPPAGAERLREFARSEQVVRFMVYDADGWVLWSD
Ga0066685_1094083713300005180SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIGDLASRLFTSSVPADFFAVSSGAPPAGAERLREFARSEQVVRFMVYDTDGWVLWSDD
Ga0066676_1018672413300005186SoilVAVARPMLHKLPALLRRRLSVSQRFALLSFFCVLAVTVLVCFASSAVLRRQLVVHDGAVIADLASRLFASSVPADFFAVPSGAPPAAAERLREFARSEQVVRFMVYDTDGWVLWSDDPSLTDHHFGENT
Ga0066676_1065712513300005186SoilMLSKLQALTLRRLSVPQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIGDLASRLFTSSVPADFFAVSSGAPPAGAERLREFARSEQVVRFMVYDTDGWVLWSDDPSLTDHHFGENT
Ga0066689_1033258923300005447SoilVQGIADRLVIMMGAQMLGKLQALTLRRLSVSQRFALLSFFCVLVITILVCAASGAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPVGADRLREFARSEQVVRFMVYDA
Ga0066681_1067681313300005451SoilMLHKLPALLRRRLSVSQRFGLLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFAAPSGAPPAGAERLREFARSEQVVRF
Ga0070704_10105453913300005549Corn, Switchgrass And Miscanthus RhizosphereMRGRLSVSQRFALLSFLCVLAITVFVCFGASTVLRTQLVKHDGVVIGDLASRLFTSIVPASFFAARSGATPAGAERLREFARSEQVVRFMVYGADGRVR
Ga0066692_1014372523300005555SoilVQGIADRLVIMMGAQMLGKLQALTLRRLSVSQRFALLSFFCVLVITILVCAASGAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPVGADRLREFARS
Ga0066704_1038909733300005557SoilMSAQTLSKLHALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMVYDADGWVLWSDD
Ga0066700_1011087823300005559SoilMLGKALMYRRLSVPQRFALLSFFCVLAITILVCVASSAVLRRQLVVHDGAVISDLASRLFTSSVPPEFFAVPSGAPPAGAERLREFARSEQVVRFMVYDAGGWVLWSD
Ga0066702_1008319313300005575SoilMLGKALMYRRLSVPQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVISDLASRLFTSSVPPEFFAVPSGAPPAGAERLREFARSEQVVRFMVYDAGGWVLWSDDASLTGHHFG
Ga0066660_1016128223300006800SoilMLGKALMYRRLSVPQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIGDLASRLFTSSVPADFFSVPSGAPPAGAERLREFA
Ga0075426_1011707833300006903Populus RhizosphereMLNKLHALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLIAHDGAVIADLASRLLTSSVPAEFFSVPSGAPPAGAERLREFARSEQVVRFMVY
Ga0075426_1029922623300006903Populus RhizosphereMLARLQALIRGRLSVSQRFALMSFLCILAITVLICFGASTVLRSQLVKHDGGVIGDLASRLFTSSVPASFFASQPGAAPANAERLREFARVEQVVRFMVYGSDGRVLWSDDSSLIDHHYGENAKVA
Ga0075424_10234495413300006904Populus RhizosphereVPAGSQAPTRRSLAASQRFALLSFFCILAITVLICGSAVVVLDRELVKHDGAVIGDLASLLFTSTVPAAFFQAPSGTAPAGAERLREFARSKDVVRFLVYDAERRVL
Ga0075435_10125693813300007076Populus RhizosphereMWANVRTLLRRRLSPAERFALLSFACILAATTLGCGAAALLLGHELVNRDGAVIGDLASRLFTSSVPAEFFASPPGPDPSGAARLREFARSGQVVRFMVYDAGGRVLWSDDASLIGRRFG
Ga0066710_10177065613300009012Grasslands SoilLGKLRALMRRRLSVSRRFALLSFLCVLAITVLVCGGASSVLRSQLVVHDGVVIGDLASRLFTSSVPASFFAAPGAAPAGAERLREFARSEQVVRFMVYDADG
Ga0099829_1031811913300009038Vadose Zone SoilMLGKLRALMHRRLSVPQRFALLSFFCILAVTVLVCGAAGTVLRSQLVKHDGAVIGDLASRLFTSSVPASFFSAPGAAPAGAERLRE
Ga0099829_1115811913300009038Vadose Zone SoilMLGKLQALMHRRLSVSRRFALLSFFCVLAITVLVCAASSAVLRRQLFVHDGAVIGDLASRLFTSIVPAEFFEARSGTAPAGAERLREFARSEQVVRFMVYNADGWVLWSDDASLTGHHFGENAKVAAALRGET
Ga0099828_1190689613300009089Vadose Zone SoilMLNKLQALTLRRLSVSQRFALLSFFCVLAITILVCAACSAVLRRQLVAHDGAVIGDLASRLFTSSVPAEFFSAPSGAPPAGAER
Ga0066709_10055305813300009137Grasslands SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCFASSAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAGPSGAPPAGAERLREFARSEQVVRFMVYDTDGWVLWSDDASLTDHHFGENTKVAAAL
Ga0066709_10075041923300009137Grasslands SoilMLGKALMYRRLSVPQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVISDLASRLFTSSVPPEFFAVPSGAPPAGAERLREFARSEQVVRFMVYDAGGWVLWSDDASLTGH
Ga0066709_10226522923300009137Grasslands SoilVQGIADRLVIMMGAQMLGKLQALTLRRLSVSQRFALLSFFCVLMITILVSAASGAVLRRQLVVHDGAVIGDLPSRLFTSSVPAEFFAVPSGAPPVGGD
Ga0099792_1025658213300009143Vadose Zone SoilMLGKLQALMHSRLSVPQRFALLSFFCILAITILLCAAAGAVLRHQLVKHDGAVIGDLASRLFTSIVPAEFFAARSGTAPAGAERLREFARSEQVVRFMV
Ga0075423_1168242123300009162Populus RhizosphereMWANVRTLLRRRLSPAERFALLSFACILAATTLGCGAAALLLGHELVNRDGAVIGDLASRLFTSSVPAEFFASPPGPDPSGAARLREFARSGQVVRFMVYDAGGRVLWSDD
Ga0134111_1022692113300010329Grasslands SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFALPSGAPPAGAERLREFARSEQVVRFMVYA
Ga0126377_1119444513300010362Tropical Forest SoilMTPTTRILDRLRALMRHRLSVSQRFALLSFLCVLTITILVCSGASVVLSRQLVKHDGAFIGDLASRLFTASVPAEFFATRSGSAPASAERLREFARSEQVLRFM
Ga0137446_114677813300011419SoilMLSKLQALIRRQLWASQRFTVLSFFCILSITVLVCVSASAILRTQLVKHDGAVIGDLAVRLFTSSVPAGFFAAPPGAAPAGAERLREFARSEQVVRFMVYGADGRV
Ga0137452_122927513300011441SoilMLSKLQALIRRRLWVSQRFAVLSFFCILSITVLVCVSASAVLRTQLVKHDGAVIGDLAVRLFTSSVPAGFFAAPPGAAPVGAERLREFARSEQVVRFMVYGANGRVRWSDETSLTDRHFGENAEVAAALRGETIAK
Ga0137389_1094466913300012096Vadose Zone SoilMLGKLRALMHRRLSVPQRFALLSFFCILAVTVLVCGAAGTVLRAQLIKHDGAVIGDLASRLFTSSVPASFFSAPGAAPAGAERLREFARSEQVVRFMVYAADGR
Ga0137389_1159129613300012096Vadose Zone SoilVQLGQLVIMMGARMLGKLQALTLRRLSVSQRFALLSFLCVLAITVLVCVASSAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPVGADRLREFARSEQVVRFMVYAADGRVLWSDDAS
Ga0137388_1082384613300012189Vadose Zone SoilMMGARMLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGVVIGDLASRLFTSTVPAQFFAVPSGAPPAGAERLREFARSEQVVRFMVYDADGWVLWSDDASLT
Ga0137365_1122512213300012201Vadose Zone SoilMLGKLRALMRRRLSVARRFALLSFLCVLTITVLVCGGASTVLRNQLVVHDGAVIGDLASRLFTSSVPASFFAAPGAVPAGAERL
Ga0137399_1012161213300012203Vadose Zone SoilMTDLSSRRASLGQLVIMMGARTLGKLQALTLRRLSVSQRFALLSFFCVLAITILVCAASSAVLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVSSGAPPASAARLREFARSEQVVRFMVYDADGWVLWSDDASLTD
Ga0137399_1065944513300012203Vadose Zone SoilMLNKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMVYDADGWVLWSDDASLT
Ga0137380_1025123013300012206Vadose Zone SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFAAPSGAPPTGAERLREFARSEQVVRFMVY
Ga0137380_1039579713300012206Vadose Zone SoilMLGRTHGSETAVAVARPMLHKLPALLRRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFAVPSGAPPAGAERLREFARSEQVVRFMVYDTDGSVVWSDDPSLTDHHF
Ga0137381_1153765513300012207Vadose Zone SoilVQGIADRLVIMMGARLLGKLQALTLHRLSVSQRFALLSFFCVLAITILVCAASSAGLRRQLVEHDGAVIGDLASRLFTSSVPASFFVAPG
Ga0137379_1169586713300012209Vadose Zone SoilMLGKLQALMHRRLSVPQRFALLSFFCILAITILVCVAAGAVLRHQLVKHDGAVIGDLASRLFTSSVPAEFFAAPSGTAPAGAARLREFARS
Ga0137378_1044747433300012210Vadose Zone SoilMLGKLRALMRRRLSASRRFALLSFLCVLAITVLVCGGASSVLRSQLVVHDGVVIGDLASRLFTSSVPASFFAAPGAAPAGAERLRE
Ga0137377_1053334533300012211Vadose Zone SoilMLGKLRALMRRRLSVSRRFALLSFLCVLAITVLVCGGASTVLRNQLVVHDGAVIGDLASRLFTSSVPASFFAAPGAAPAGAERLREFARSEQ
Ga0137370_1045196913300012285Vadose Zone SoilMLSKLQALTIRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGTPPAGAERLREFARSEQVVR
Ga0137387_1003960713300012349Vadose Zone SoilVQGIADRLVIMMGARLLGKLQALTLHRLSVSQRFALLSFFCVLAITILVCAASSAGLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQV
Ga0137387_1009483913300012349Vadose Zone SoilMLNKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVAHDGAVIGDLASRLFTSSVPAEFFAVPSGTPPAGAERLREFARSEQVVRFMVYDA
Ga0137387_1022154133300012349Vadose Zone SoilMLGKLLALMHRRLSVSQRFALLSFFCILAITVLICAAAGAVLRHELVKHDGAVIGDLASRLFTSIVPAGFFAAPSGAAPAGAERLREFAR
Ga0137386_1014202713300012351Vadose Zone SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGTVIADLASRLFTSSVPAEFFAVPSGAPPAGAERLREFARSEQVVRFMVYDTDGSVL
Ga0137386_1066817313300012351Vadose Zone SoilMMSAQILGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFTSSVPAEFFAGPSGAPPAGAERLREFARSEQVVRFMVYDADGWVL
Ga0137386_1111943913300012351Vadose Zone SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFAAPSGAPPTGAERLREFARSEQVVRFMVYDADGWVL
Ga0137384_1056407323300012357Vadose Zone SoilMLHKLPALLRRRLSVSQRFALLSFFCVLAVTVLVCVASSAVLRRQLVVHDGAVIADLASRLFASSVPADFFALPSGAPPAGAERLRE
Ga0137360_1049042523300012361Vadose Zone SoilMIGAQMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIADLASRLFTSSVPAEFFAVPSGTPPAGAERLREFARSEQVVRFMVYAADG
Ga0137360_1078687223300012361Vadose Zone SoilVQGIADRLVIMMGARLLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGAVISDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMVY
Ga0137361_1020728943300012362Vadose Zone SoilMLGKLRALMHRRLSVPQRFALLSFFCILAVTVLVCGAAGTVLRAQLIKHDGAVIGDLASRLFTSSVPASFFSAPGAAPAGAERLREFARSEQVVRFMVYAADGRVLWSD
Ga0137361_1046056323300012362Vadose Zone SoilVQGIADRLVIMMGARLLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGAVISDLASRLFTSSVPAEFFAVPSGAPPASAARLR
Ga0137361_1064494023300012362Vadose Zone SoilVQGIADRLVIMMGAQMLGKLQALTLRRLSVSQRFALLSFFCVLVITILVCAASGAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPVGADRLREFARSEQVVRFMVYAADGRVLWS
Ga0137361_1072351013300012362Vadose Zone SoilMLRRLSVSRRFALLSFLCVLAITVLVCGGASSVLRSQLVVHDGVVIGDLASRLFTSSVPASFFAAPGAAPAGAERLREFARSEQVVRFMVYAADGRVLWSDD
Ga0137361_1131557713300012362Vadose Zone SoilMLGKLRALMRRRLSVSRRFALLSFLCVLAITVLVCGGASTVLRNQLVVHDGAVIGDLASRLFTSSVPASFFAAPGAAPAGAER
Ga0137397_1105001613300012685Vadose Zone SoilMLGRLQALMHRRLSVPQRFALLSFFCILAITVLVCAAAGTVLRHQLVKHDGAVIGDLASRLFTSSVPAEFFAAPSGAAPAGAERLREFARSEQVVRFMVYAANGLVLWADDASLANRHFGENGKVAAALRGETIAEIS
Ga0137396_1113622513300012918Vadose Zone SoilMTDLSSRRASLGQLVIMMGARMLGKLQALTLRRLSVSQRFALLSFFCVLAITILVCAASSAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVQS
Ga0137394_1082326213300012922Vadose Zone SoilMLDKLQALTLRRLSVSQRFALLSFLCVLAITVLVCVASSAVLRRQLVAHDGAVIADLASRLFTSSVPAQFFAVPSGAPPAGAERLREFARSEQVVRFMVYDADGWVLWSDDPSLA
Ga0137419_1080634823300012925Vadose Zone SoilMLGKLHALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVAHDGAVIADLASRLFTSSVPAEFFAVSSGAPPAGAERLREFARSEQVVRFMVY
Ga0137419_1137351713300012925Vadose Zone SoilMLAKLQALMRGRLSVSQRFALLSFLCVLAITVLVCVASGAVLRRQLVVHDGAVIADLASRLFTSSVPAGFFAAPSGTAPAGAERLREFARSEQVVRFMVYATDG
Ga0137416_1013817833300012927Vadose Zone SoilMGAWMLSKLHALTLRRLSVSQRFALPSFFCVLAITLLVCAASSAVLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMVYDADGWV
Ga0137416_1105204723300012927Vadose Zone SoilVQSIADQLVIMMGARMLGKLQALTLRRLSVSQRFALLSFVCVLAITVLVCAASSAGLRRQLVEHDGVVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMVY
Ga0137404_1111716623300012929Vadose Zone SoilMLGKLQALMRGRLSVSQRFALLSFLCVLAITVLVCFGASTVLRTQLVKHDGVVIGDLASRLFTSIVPASFFAARSGAAPAGAERLREFARSEQVVRFMVYGADGRVRWSDD
Ga0137410_1011698933300012944Vadose Zone SoilVQGIADRLVIMMGARMLGKLQALTLHRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAAPAGAERLREFARSEQVVRFMVYDADGWVLWSDDASLTDHHFGENT
Ga0134076_1058884513300012976Grasslands SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFSVPSGAPPAGAERLREFAR*
Ga0137403_1010444153300015264Vadose Zone SoilMLNRLQALMLRRLSVSRRFALLSFLCVLAITVLVCVASSAVLRRQLVVHDGAVIGDLASRLFTSIVPAEFFAAPSGAPPAGAERLREFARSEQVVRFMVYD
Ga0134085_1047538413300015359Grasslands SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIGDLASRLFTSSVPADFFAVSSGAPPAGAERLREFARSEQVVRFMVYDTDGWV
Ga0184636_102708113300018068Groundwater SedimentMLSKLQALIRRRLWVSQQFAVLSFFCILSITVLVCVSASAVLRTQLVKHDGAVIGDLAVRLFTSSVPAGFFAAPPGAAPVGAERLREFARSEQVVRFMVYGADGRVRWSDETSLTDRHFGENAEVAAALRGETIAKI
Ga0184649_121373323300020068Groundwater SedimentMLSKLQALIHRQLWASQQFAVLSFFCILAITVLVCVSASAVLRTQLVKHDGAVIGDLAVRLFTSSVPAGFFAAPPGAAPVGAERLREFARSEQVVRFMVYGADGRVRWSDETSLTDR
Ga0210379_1016275413300021081Groundwater SedimentMLSKLQALIRRQLWVSQQFAVLSFFCILSITVLVCVSASAVLRTQLVKHDGAVIGDLAVRLFTSSVPAGFFAAPPGAAPVGAERLREFARSEQVVRF
Ga0179596_1017915413300021086Vadose Zone SoilMRRRLSVSRRFALLSFLCVLAITVLVCVASSAVLHRQLVMHDGAVIGDLASRLFTSSVPAGFFAAPSGTAPAGAERLREFARSE
Ga0209350_113055913300026277Grasslands SoilMLGKALMYRRLSVPQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVISDLASRLFTSSVPPEFFAVPSGAPPAGAERLREFARSEQVVRFMVYDAGGWVLWSDDASLT
Ga0209235_124881523300026296Grasslands SoilMMGARMLGKLQALTLRRLSVSQRFALLSFLCVLAITVLVCVASSAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFTVRSGAAPAGAARLR
Ga0209236_116386123300026298Grasslands SoilMMGAQMLGKLQALTLRRLSVSQRFALLSFFCVLVITILVCAASGAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPVGADRLREFARSEQVVRFMVYAADGRVLWSDDASLADRHFGENAKVAAA
Ga0209236_119571723300026298Grasslands SoilVQGIADRLVIMMGARLLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREF
Ga0209240_122696513300026304Grasslands SoilMLNKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAACSAVLRRQLVAHDGAVIGDLASRLFTSSVPAEFFAVPSGTPPAGAERLREFARSEQVVRFMVYDADGWVLWSDDPSLADHHFGENT
Ga0209761_117080313300026313Grasslands SoilVQGIADRLVIMMGAQMLGKLQALTLRRLSVSQRFALLSFFCVLVITILVCAASGAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPVGADRLREFARSEQVVRFMVYAADGRVLWSDDAS
Ga0209761_124460113300026313Grasslands SoilMSAQTLSKLHALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREF
Ga0209647_115163323300026319Grasslands SoilMHRRLSVPQRFALLSFFCILAITILLCAAAGAVLRHQLVKHDGAVIGDLASRLFTSSVPAEFFAAPSGAAPAAAEQLREFARSEQVVRFMVYAADGLVLWADD
Ga0209131_107937513300026320Grasslands SoilMLGRIQALTRRRFSVSRRFALLSFLCVLAITVLICVASSAILRRQLVVHDGAVIGDLAARLFTSSVPAGFFAAPSGTAPAGAERLREFARSEQVVRFM
Ga0209470_137707713300026324SoilMLSKLQALTLRRLSVPQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIGDLASRLFTSSVPADFFAVSSGAPPAGAERLREFARSEQVVRFMVYDTDGWVLWSDDPSLTDHHFGENTKVAAALHGEIIA
Ga0209803_115241323300026332SoilMMGAQMLGKLQALTLRRLSVSQRFALLSFFCVLVITILVCAASGAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPVGADRLREFARSEQVVRFMVYAADGRVLWSDDASLADRHF
Ga0209804_105435743300026335SoilMLGKALMYRRLSVPQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIGDLASRLFTSSVPADFFSVPSGAPPAGAERLREFARSEQVVRFMVYDADGWVLWSDDASLSDHHFGENTKVA
Ga0209057_117988013300026342SoilMLSKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRRQLVVHDGAVIADLASRLFASSVPADFFAVPSGAPPAAAERLR
Ga0209806_129055113300026529SoilMTGLSSRRASLGQLVIMMSAWMLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCVASSAVLRHQLVVHDGAVIGDLASRLFTSSVPAEFFAGLSGKAPA
Ga0209160_102413013300026532SoilMLGRLQALMLRRPSVSQRFALLSFGCVLAITVLVCVASSAVLRHELVKHDGAVTGDLASRLFTSSVPVEFFLAPTGTAPTGAARLREFARS
Ga0209160_106704613300026532SoilMSAQTLSKLHALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMVYDADGWVLWSDDPSLTDHHF
Ga0209056_1034989323300026538SoilMLSKLQALTRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVVHDGAVIADLASRLFTSSVPADFFSVPSGAPPAGAERLREFARSEQVVRFMVYEGRRRIARRNDR
Ga0209376_122149523300026540SoilLTGLSSCRASLGQLVIVMSAQMLGKLQALTLRRLSVSQRFTLLSFFCVLAITVLVCTASSAVLRRQLVVHDGAVIGDLASRLFTSSVPAEFFASPSGAPPAGAERLRKFARSEQVVRFMVYDTDGWV
Ga0179587_1038159813300026557Vadose Zone SoilMLGKLHALTLRRLSVSQRFALLSFFCVLAITVLVCTASSAVLRRQLVAHDGAVIADLASRLFTSSVPAEFFAVSSGAPPAGAERLREF
Ga0208983_101153623300027381Forest SoilMLGKLQALMHRRLSVPQPFALLSFFCILTITILLCAAAGAVLRHQLVKHDGAVIGDLASRLFTSSVPAEFFAAPSGAAPAGAERLREFARSEQVVRFMVYDADGWVLWSDDPSLTDHHFGENTKVAAALRGETTAEI
Ga0209213_107057113300027383Forest SoilVKSSKVMGAWMLSKLHALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVEHDGVVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMVYDADGW
Ga0209179_104188413300027512Vadose Zone SoilMLGKLQALMHRRLSVPQRFALLSFFCILAITILLCAAAGAVLRHQLVKHDGAVIGDLASRLFTSSVPAEFFAAPSGAAPAGAERLREFARSEQVVRFMVYAADGSVLWADDA
Ga0209106_111729613300027616Forest SoilMLDKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVEHDGAVIGDLASRLFTSSVPAEFFAVPSGAPPASAARLREFARSEQVVRFMLYDADEWV
Ga0209388_108960723300027655Vadose Zone SoilMMGARMLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVEHDGAVIGDLASRLFTSSVPAEFFEVPSGAPPASAARLREFARSEQVVRFMVYDADGWVLWSDDASLTDHHFGE
Ga0209701_1037376413300027862Vadose Zone SoilMLGKLRALMHRRLSVPQRFALLSFFCILAVTVLVCGAAGTVLRAQLIKHDGAVIGDLASRLFTSSVPASFFSAPGAAPAGAERLREFARSEQVVRFMVYAAD
Ga0209283_1011471923300027875Vadose Zone SoilMMGARMLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAVLRRQLVEHDGAVIGDLASRLFTSSVPAEFFEVPSGAPPASAARLREFARSEQVVRFMVYDADGWVLWSDDATLTDHHFGENTK
Ga0137415_1031392013300028536Vadose Zone SoilMMGARMLGKLQALTLRRLSVSQRFALLSFFCVLAITVLVCAASSAGLRRQLVENDGAVIGDLASRLFTSSVPAEFFAVPSGAAPAGAERLREFARSEQVVRFMVYDADGWVLW
Ga0137415_1051680523300028536Vadose Zone SoilMLGKLQALMHRRLSVPQRFALLSFFCILAITILLCAAAGAVLRHQLVKHDGAVIGDLASRLFTSSVPAEFFAAPSGAAPAGAERLREFARSEQVVRFMVYAADGSVLWADDASLA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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