NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F095244

Metagenome / Metatranscriptome Family F095244

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095244
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 48 residues
Representative Sequence MNLKNITADKLVALYKNRDLTVTEVIKSVYEEIDRVDKDVRAFISL
Number of Associated Samples 94
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.67 %
% of genes near scaffold ends (potentially truncated) 98.10 %
% of genes from short scaffolds (< 2000 bps) 95.24 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.143 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(10.476 % of family members)
Environment Ontology (ENVO) Unclassified
(21.905 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.714 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.30%    β-sheet: 0.00%    Coil/Unstructured: 52.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02686Glu-tRNAGln 60.95
PF05258DciA 34.29
PF03938OmpH 0.95
PF13084DUF3943 0.95
PF05685Uma2 0.95
PF01230HIT 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0721Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunitTranslation, ribosomal structure and biogenesis [J] 60.95
COG5512Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)General function prediction only [R] 34.29
COG2825Periplasmic chaperone for outer membrane proteins, Skp familyCell wall/membrane/envelope biogenesis [M] 0.95
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.14 %
UnclassifiedrootN/A2.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10009015All Organisms → cellular organisms → Bacteria3548Open in IMG/M
3300003321|soilH1_10327727All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300004114|Ga0062593_100239971All Organisms → cellular organisms → Bacteria1486Open in IMG/M
3300004157|Ga0062590_102431307All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes553Open in IMG/M
3300004463|Ga0063356_100318972All Organisms → cellular organisms → Bacteria1940Open in IMG/M
3300004463|Ga0063356_101627492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes962Open in IMG/M
3300004633|Ga0066395_10266070All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300004803|Ga0058862_12715000All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300005093|Ga0062594_100180723All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300005093|Ga0062594_102631873All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300005180|Ga0066685_10040190All Organisms → cellular organisms → Bacteria2960Open in IMG/M
3300005337|Ga0070682_101456248All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300005347|Ga0070668_100723706All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300005353|Ga0070669_100221132All Organisms → cellular organisms → Bacteria1497Open in IMG/M
3300005447|Ga0066689_10757047All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005466|Ga0070685_10051963All Organisms → cellular organisms → Bacteria2371Open in IMG/M
3300005544|Ga0070686_101266224All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300005558|Ga0066698_10480049All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300005569|Ga0066705_10548092All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300005576|Ga0066708_10628262All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300005615|Ga0070702_101310479All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005713|Ga0066905_101115177All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300005719|Ga0068861_102524488All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005836|Ga0074470_10429096All Organisms → cellular organisms → Bacteria → Acidobacteria1158Open in IMG/M
3300005836|Ga0074470_11198114All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005840|Ga0068870_10977669All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300005843|Ga0068860_100581626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1124Open in IMG/M
3300006049|Ga0075417_10420767All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300006794|Ga0066658_10189414All Organisms → cellular organisms → Bacteria → Acidobacteria1080Open in IMG/M
3300006797|Ga0066659_11809031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes517Open in IMG/M
3300006844|Ga0075428_101392492All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300006845|Ga0075421_100249146All Organisms → cellular organisms → Bacteria2178Open in IMG/M
3300006846|Ga0075430_100214471All Organisms → cellular organisms → Bacteria → Acidobacteria1597Open in IMG/M
3300006852|Ga0075433_10833249All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300006871|Ga0075434_101021451All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300009012|Ga0066710_102193362All Organisms → cellular organisms → Bacteria → Acidobacteria807Open in IMG/M
3300009012|Ga0066710_102447075All Organisms → cellular organisms → Bacteria → Acidobacteria756Open in IMG/M
3300009094|Ga0111539_12153464All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300009098|Ga0105245_11330115All Organisms → cellular organisms → Bacteria → Acidobacteria768Open in IMG/M
3300009137|Ga0066709_104446268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes512Open in IMG/M
3300009147|Ga0114129_10979899All Organisms → cellular organisms → Bacteria → Acidobacteria1066Open in IMG/M
3300009162|Ga0075423_10469243All Organisms → cellular organisms → Bacteria → Acidobacteria1323Open in IMG/M
3300009553|Ga0105249_11239251All Organisms → cellular organisms → Bacteria → Acidobacteria817Open in IMG/M
3300010048|Ga0126373_10517309All Organisms → cellular organisms → Bacteria → Acidobacteria1238Open in IMG/M
3300010048|Ga0126373_11565720All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300010086|Ga0127496_1052838All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300010323|Ga0134086_10131376All Organisms → cellular organisms → Bacteria → Acidobacteria904Open in IMG/M
3300010329|Ga0134111_10548927All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300010358|Ga0126370_10511267All Organisms → cellular organisms → Bacteria → Acidobacteria1017Open in IMG/M
3300010360|Ga0126372_10777157All Organisms → cellular organisms → Bacteria → Acidobacteria946Open in IMG/M
3300010360|Ga0126372_12069354All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300010366|Ga0126379_10926638All Organisms → cellular organisms → Bacteria → Acidobacteria974Open in IMG/M
3300010397|Ga0134124_11011538All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300010399|Ga0134127_13455462All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300010400|Ga0134122_11588620All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300010401|Ga0134121_10593779All Organisms → cellular organisms → Bacteria → Acidobacteria1035Open in IMG/M
3300011440|Ga0137433_1315363All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300012039|Ga0137421_1241387All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300012202|Ga0137363_10998533All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300012209|Ga0137379_10455832All Organisms → cellular organisms → Bacteria → Acidobacteria1187Open in IMG/M
3300012211|Ga0137377_11567949All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300012357|Ga0137384_10717911All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300012388|Ga0134031_1179088All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300012469|Ga0150984_113935068All Organisms → cellular organisms → Bacteria → Acidobacteria771Open in IMG/M
3300012469|Ga0150984_115700305All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300012944|Ga0137410_11960586Not Available520Open in IMG/M
3300012948|Ga0126375_10142194All Organisms → cellular organisms → Bacteria → Acidobacteria1499Open in IMG/M
3300012948|Ga0126375_10677950All Organisms → cellular organisms → Bacteria → Acidobacteria799Open in IMG/M
3300012948|Ga0126375_11411633All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300012948|Ga0126375_12076090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Thermacetogenium → Thermacetogenium phaeum504Open in IMG/M
3300012971|Ga0126369_13573831All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300014320|Ga0075342_1178668All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300015373|Ga0132257_100472471All Organisms → cellular organisms → Bacteria → Acidobacteria1535Open in IMG/M
3300016404|Ga0182037_11321900All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300017656|Ga0134112_10401115All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300017657|Ga0134074_1407339All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300017792|Ga0163161_11838004Not Available539Open in IMG/M
3300017965|Ga0190266_11058434All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300018074|Ga0184640_10172986All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300018079|Ga0184627_10422806All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300019487|Ga0187893_10272652All Organisms → cellular organisms → Bacteria → Acidobacteria1226Open in IMG/M
3300022756|Ga0222622_10294677All Organisms → cellular organisms → Bacteria → Acidobacteria1114Open in IMG/M
3300025174|Ga0209324_10832155All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300025941|Ga0207711_11380673Not Available647Open in IMG/M
3300025960|Ga0207651_10043575All Organisms → cellular organisms → Bacteria2996Open in IMG/M
3300025961|Ga0207712_10809125All Organisms → cellular organisms → Bacteria → Acidobacteria824Open in IMG/M
3300025972|Ga0207668_11078954All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300026121|Ga0207683_11155265All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300026121|Ga0207683_11668720All Organisms → cellular organisms → Bacteria → Acidobacteria587Open in IMG/M
3300026323|Ga0209472_1043091All Organisms → cellular organisms → Bacteria → Acidobacteria1983Open in IMG/M
3300026523|Ga0209808_1301946All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300026538|Ga0209056_10189528All Organisms → cellular organisms → Bacteria → Acidobacteria1519Open in IMG/M
3300027874|Ga0209465_10257929All Organisms → cellular organisms → Bacteria → Acidobacteria873Open in IMG/M
3300031740|Ga0307468_101664258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes599Open in IMG/M
3300031847|Ga0310907_10650746All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300031890|Ga0306925_11046444All Organisms → cellular organisms → Bacteria → Acidobacteria829Open in IMG/M
3300031908|Ga0310900_10830223All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300031912|Ga0306921_12303210All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300031946|Ga0310910_11155273All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300031954|Ga0306926_10685700All Organisms → cellular organisms → Bacteria → Acidobacteria1244Open in IMG/M
3300032180|Ga0307471_103897870All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300032205|Ga0307472_101279548All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300032261|Ga0306920_100924865All Organisms → cellular organisms → Bacteria → Acidobacteria1274Open in IMG/M
3300033289|Ga0310914_11358536All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300034668|Ga0314793_077937All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.52%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.86%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.90%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.95%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.95%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.95%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.95%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010086Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014320Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1000901543300002558Grasslands SoilMNLQNITADKLVGLYKNRDLTAIEVITSLYEDIERTDKDVHAFLSICRERALLSGYIRIAI*
soilH1_1032772713300003321Sugarcane Root And Bulk SoilMNLKNITAEKLVALYQNRDLTVTEVIKGVYEEIDRVDKDVRAFLALCPDRALEDAR
Ga0062593_10023997113300004114SoilMNLKTITADKLVALYKNRDLTVTEVIMSVYEQIANVDQDVRAFLSLCPERA
Ga0062590_10243130713300004157SoilMNLKGITTDKLVALYQKREASVTEVITSVFEEIHRTDKDVRAFLTLCPD
Ga0063356_10031897253300004463Arabidopsis Thaliana RhizosphereMNLKNITADKLVDLYYQREVSVTEVITSVFEEIERTDKDVRAFLTLCPDQALE
Ga0063356_10162749233300004463Arabidopsis Thaliana RhizosphereMNLKNITADKLVSLYKNKDLSVTEVISSTYEEIARTDAQIHAFISLTQERALGEARRMD
Ga0066395_1026607033300004633Tropical Forest SoilMNLRNITADKLVALYKNREISVTEVIKSVYEEIEKVDKDVRALLSICPDRALDE
Ga0058862_1271500033300004803Host-AssociatedMNLKNITADKLVALYRNRDLSVTEVIRSVYEEIERVDGDVR
Ga0062594_10018072313300005093SoilMNLKSMTADKLVGLYRNHDLSVTEVIQSVFDEIERSDKNIRAFL
Ga0062594_10263187313300005093SoilMNLKNMTADRLVGLYRNHDLSVTEVIRSVFDEIERNDKNIHAFLTLCKDRA
Ga0066685_1004019013300005180SoilMNLRNITADKLVALYQNRDLSASEVITSVYDEIERRDKEVHAFLSNCRERALEEARRMD
Ga0070682_10145624833300005337Corn RhizosphereMNLKNITADKLVAMYAKRDLSVTEVLNGVFEEIDRSDKNIRAFITVCRESAL
Ga0070668_10072370613300005347Switchgrass RhizosphereMNLKNMTADKLVGLYRNHDLSVTEVIRSVFDEIDRNDQSIHA
Ga0070669_10022113243300005353Switchgrass RhizosphereMNLKSMTADKLVGLYRNHDLSVTEVIQSVFDEIERSDKNIRAFLS
Ga0066689_1075704713300005447SoilMNLKNITADKLVALYKNRDLTVTEVITNVYDEIERTDQDVRSF
Ga0070685_1005196343300005466Switchgrass RhizosphereMNLKNMTADRLVGLYRNHDLSVTEVIRSVFDEIERNDKNIHAFLTLCKDR
Ga0070686_10126622433300005544Switchgrass RhizosphereMNLKNITADRLVSLYANRDLSVTEVITSVFDEIDRSDGNIHAFITLCRERALEEARRT
Ga0066698_1048004933300005558SoilMNLQNITADKLVGLYKNRDLTATEVITSLYEDIECTDKDVRAFLSICRERALEEAR
Ga0066705_1054809233300005569SoilMNLKDITAEKLVGLYRNRDLTVTEVITSTYGDIERIDKDVRAFITLCPLRAFEEARRMDERIASGE
Ga0066708_1062826233300005576SoilMNLRNITADKLVALYQNRDLTASEVITSVYDEIERRDKEVHAFLSNCRERALEEA
Ga0070702_10131047933300005615Corn, Switchgrass And Miscanthus RhizosphereMNLKSMTADKLVGLYRNHDLSVTEVIQSVFDEIERSDKNIRAFLSLC
Ga0066905_10111517713300005713Tropical Forest SoilMNLKNITADKLVALYRNRDLTITEVIKNVYEQIERVDKD
Ga0068861_10252448813300005719Switchgrass RhizosphereMNLKNITADKLVALYKNHDLRVTEVIKSVYEEIDKVDKDVRAFL
Ga0074470_1042909643300005836Sediment (Intertidal)MNLRTLTADKLVSFYQHGDLSVMEVITSVFDEIERTDKDVRAYIT
Ga0074470_1119811413300005836Sediment (Intertidal)MNLKNITADRLVSLYANHDLSVTEVITSVFDEIDRSDGNIHAFITLCREPAGRR*
Ga0068870_1097766933300005840Miscanthus RhizosphereMNLKNITADKLVALYKNHDLRVTEVIKSVYEEIDKVDK
Ga0068860_10058162643300005843Switchgrass RhizosphereMNLKSITADKLVSLYAHRDLTVTEVISSVFEEIDRSDKSIHAFITLCR
Ga0075417_1042076713300006049Populus RhizosphereMNLKNITADKLVALYKNRDLTVTEVIKSAYEEIERTDGGVRAFLSLCPERALDEARRLDA
Ga0066658_1018941413300006794SoilMNLRNITADKLVALYQNRDLTASEVITSVYDEIERRDKEVHAFLSNC
Ga0066659_1180903113300006797SoilMNLKNITADKLVALYKNRDLTVTEVITNVYDEIERTDQDVRSFISLSRDRALEEARR
Ga0075428_10139249213300006844Populus RhizosphereMNLKNITADKLVALYKNRDLTATEVIKGVYEQIEHVDKDVHAFLSLNP
Ga0075421_10024914613300006845Populus RhizosphereMNLKNITADKLVALYRNRDLTITEVIKNVYNQIEGVDKDVRAFLSICPERALDEARRLDGQI
Ga0075430_10021447143300006846Populus RhizosphereMNLKNITADKLVALYRNRDLTITEVIKNVYDQIERVDKDVR
Ga0075433_1083324913300006852Populus RhizosphereMNLKNITADRLVALYKNRDLTVTEVIKSVYQEIERSDSQVRAFLWLCPERALDEARRLDARISA
Ga0075434_10102145113300006871Populus RhizosphereMNLKNITADKLAALYRNKDLSVTEVIKSTYEEVARVDKSIRAFISLS
Ga0066710_10219336213300009012Grasslands SoilMNLKDITADKLVSLYKNRDLTVTEVITGVYKEIERTDKDVRAF
Ga0066710_10244707513300009012Grasslands SoilMNLKNITADKLIALYKNKDLSVSEVISGTYEEIVRTDKDI
Ga0111539_1215346413300009094Populus RhizosphereMNLKNLTADKLALLYRNRDVTVTEVVRNLFEEIDRTDP
Ga0105245_1133011533300009098Miscanthus RhizosphereMNLKNITADKLVSLYANRDLSVTEVINSVFDEIDRSDGNIHAFITLCRERALEE
Ga0066709_10444626823300009137Grasslands SoilMNLKDITADKLVALYKNRDLTATEVITNVYDEIERTDKDVRAFLSTCRDRALEEARRMDTRIT
Ga0114129_1097989943300009147Populus RhizosphereMNLKNLTADKLALLYRNRDVTVTEVVRNLFEEIDRTDPSVRAFITLSRER
Ga0075423_1046924313300009162Populus RhizosphereMNLKNLTADKLVALYKNRDLTVTEVIKGVYHEIERVDKDVRAFLWL
Ga0105249_1123925113300009553Switchgrass RhizosphereMNLRDITADKLVALYQNRDASVTEVITSVFEEIERTDRSVRAFLTVCK
Ga0126373_1051730943300010048Tropical Forest SoilMNLKNITADKLVALYRNRDLSVTEVIKSVYEEIDRVDGSVKAFLSVSPDRALEDAR
Ga0126373_1156572033300010048Tropical Forest SoilMNLKNITADKLVALYRNRDLTITEVIKNVYEEIEQVDKDVRAFLSIC
Ga0127496_105283833300010086Grasslands SoilMNLQNITADKLVGLYKNRDLTASEVITSLYEDIERTDKDVRAFLSIYRERALEEARR
Ga0134086_1013137643300010323Grasslands SoilMNLQNITADKLVGLYKNRDLTATEVITSLYEDIERTDKDVHAFLSI
Ga0134111_1054892713300010329Grasslands SoilMNLKNITADKLVGLYLNRDLSVTEVVTSTYQEIERIDKDVRAFITQCPLRAFEEARRMDE
Ga0126370_1051126713300010358Tropical Forest SoilMNLKNITADKLVVLYRNRDLSVTEVIKSVYEEIDRVDGSVKAFLSVSP
Ga0126372_1077715743300010360Tropical Forest SoilMNLKNITADKLVALYQNRDLTVTEVIKSVYEEIDRVDGRVKAFLSVSPDRALDEARRL
Ga0126372_1206935413300010360Tropical Forest SoilMNLKNITADKLVALYRNRDLTITEVIKNVYEEIEQVDKDVRAF
Ga0126379_1092663813300010366Tropical Forest SoilMNLKNITADKLVALYRNRDLTITEVIKNVFEQIEQVDKDV
Ga0134124_1101153843300010397Terrestrial SoilMNLKTITADKLVALYKNRDLTVTEVIMGVYEQIANVDQ
Ga0134127_1345546233300010399Terrestrial SoilMNLKNMTADRLVGLYRNHDLSVTEVIRSVFDEIERNDKNIHAFLTLCKERA
Ga0134122_1158862013300010400Terrestrial SoilMNLKNITADKLVSLYAKRDLSVTEVVNGVFEEIDRSDKNIRAFITLCRESALEDARQ
Ga0134121_1059377913300010401Terrestrial SoilMNLKNITADRLLPLYANRDVSVTEVITSVFEEIDKSDGNLRAFVTLCRDRALEE
Ga0137433_131536313300011440SoilMNLKNITADKLVALYKNGDLSVTEVITSVFDEIDRTDNDVHAYIT
Ga0137421_124138733300012039SoilMNLKNITADKLVALYKNRDLTVTEVIKSVYEEIDR
Ga0137363_1099853313300012202Vadose Zone SoilMNLKDITADKLVSLYKNRDMTVSEVITSVYEEIERT
Ga0137379_1045583213300012209Vadose Zone SoilMNLKDITADKLVALYKNRDLSVTEVIKNVYEEIDRTDKNLRAFITICPERALDEA
Ga0137377_1156794913300012211Vadose Zone SoilMNLKDITADKLVSLYKNRDLTVTEVITGVYEEIERTDKD
Ga0137384_1071791133300012357Vadose Zone SoilMNLKDITADKLVALYKNRDLSVTEVIKSVYEEIDRVDKQVRAFITI
Ga0134031_117908833300012388Grasslands SoilMNLQNITADKLVGLYKNRDLTATEVITSLYEDIEC
Ga0150984_11393506833300012469Avena Fatua RhizosphereMKLKDFTAEKLVALYKNRDLSVTEVITNVFQEIERTDKD
Ga0150984_11570030513300012469Avena Fatua RhizosphereMNLKNITAEKLVALYRNKDLSVSEVISGTYEEIVHTEKTLHAFISLC
Ga0137410_1196058633300012944Vadose Zone SoilMNLKNITADRLVSLYANRDLSVTEVITSVFDEIDRND
Ga0126375_1014219413300012948Tropical Forest SoilMNLKNITADKLVALYKNRDLTVTEVIKSVYEEIERSDSQVRAF
Ga0126375_1067795013300012948Tropical Forest SoilMNLKNLTADKLVALYKNRDLTVTEVIKGVYDEIERVDKDVRAFLWL
Ga0126375_1141163313300012948Tropical Forest SoilMNLKNISADKLVALYKNRDLTVREVIEGVYDEIDRVDKHIRAFL
Ga0126375_1207609013300012948Tropical Forest SoilMNLKDITAERLVNLYRNGDLSVTEVVRSLYDEIDRIDRDVRAFITLSRDRAL
Ga0126369_1357383133300012971Tropical Forest SoilMKLKQITADKLVALYKNRDLTVTEVIQGVYEEIERVDRNIKAFLSLCPDRALDE
Ga0075342_117866813300014320Natural And Restored WetlandsMNLNNITADKLVALYKNKDLSVSEVIRSTYEEIARIDKGIRAFISLCPERALEEARRM
Ga0132257_10047247143300015373Arabidopsis RhizosphereMNLRNITADKLVALYKNREVSVTEVIKSVYEEIEKVDKDVRALLSICPDRALDDGRRL
Ga0182037_1132190033300016404SoilMNLKNITADKLVALYRNRDLTVTEVIKGVYDSIERVDKDVRAFLS
Ga0134112_1040111533300017656Grasslands SoilMNLKNITADKLASLYKNGDLTVTEVITSVFDEIDRTDKDVRAFITLCQD
Ga0134074_140733923300017657Grasslands SoilMNLKNITADKLVGLYLNRDLSVTEVVTSTYQEIERIDKDVRAFITQCPLRAFEEARRMDEQIATGE
Ga0163161_1183800413300017792Switchgrass RhizosphereMNLKNITADKLVALYANRDLTVSEVITSVFEEIDRTDKSVRAFITLCRDRA
Ga0190266_1105843433300017965SoilMNLKNLTADRLVQLYANRDLTVTEVITSVFDEIDRSDG
Ga0184640_1017298643300018074Groundwater SedimentMNLRNITADKLVALYKNKDLSVSEVIRATYEEIERTDKEIHSYISLCPERALEEAR
Ga0184627_1042280613300018079Groundwater SedimentMNLRNITADKLVALYKNKDLSVSEVIRATYEEIERTDKEIHSYISLCPERA
Ga0187893_1027265213300019487Microbial Mat On RocksMNLKTITAEKLVSLYKNHDLTVTEVVTGVFDDIERLDKDVRAFITLC
Ga0222622_1029467743300022756Groundwater SedimentMNLKNITADRLVSLYANRDLTVTEVITSVFDEIDKS
Ga0209324_1083215513300025174SoilMNLKNITADKLVALYKNRDLTVTEVIRSVYEEIERSDRDIRAFITICPDRA
Ga0207711_1138067333300025941Switchgrass RhizosphereMNLKNITADRLVSLYANRDLSVTEVITSVFDEIDRSDGNIRAFITLCRERAL
Ga0207651_1004357573300025960Switchgrass RhizosphereMNLKNITADKLVSLYANRDLSVTEVINSVFDEIDRSDGNIHAF
Ga0207712_1080912533300025961Switchgrass RhizosphereMNLRDITADKLVALYQNRDASVTEVITSVFEEIERTDRSVRAFLTVC
Ga0207668_1107895413300025972Switchgrass RhizosphereMNLKNMTADKLVGLYRNHDLSVTEVVRSVFDEIDRNDQSIHA
Ga0207683_1115526533300026121Miscanthus RhizosphereMNLRDITADKLVALYQNRDASVTEVITSVFEEIER
Ga0207683_1166872033300026121Miscanthus RhizosphereMNLKNITADRLVSAYANRDLSVTEVITSVFDEIDRSDGNIHAFITLCRERALEEAR
Ga0209472_104309143300026323SoilMNLQNITADKLVGLYKNRDLTATEVITSLYEDIERTDKDV
Ga0209808_130194633300026523SoilMNLQNITADKLVGLYKNRDLTATEVITSLYEDIERTDKDVHAFLSICRER
Ga0209056_1018952843300026538SoilMNLQNITADKLVGLYKNRDLTATEVITSLYEDIERTDKDVRAFLSIYRERALEEA
Ga0209465_1025792933300027874Tropical Forest SoilMNLRNITADKLVALYKNREISVTEVIKSVYEEIEKV
Ga0307468_10166425833300031740Hardwood Forest SoilMNLKGITAERLVTLYKNRDLTVTEVIKGVYDEIDRVDKDVRAFLSLSPERALDDARRMDGKIAAG
Ga0310907_1065074613300031847SoilMNLRDITADKLVALYQNRDASVTEVITSVFEEIERTDRSVRAFLTV
Ga0306925_1104644433300031890SoilMNLKNITADKLVALYRNRDLTVTEVIKGVYDSIERVDK
Ga0310900_1083022313300031908SoilMNLKNITADKLVALYKNRDLTVTEVIKSVYEEIDRVDKDVRAFISL
Ga0306921_1230321033300031912SoilMNLKNITADKLVALYRNRDLSVTEVIKSVYEQAERVEPGI
Ga0310910_1115527333300031946SoilMNLKNITADKLVALYRNRDLTVTEVIKGVYDSIERVDKDVRAFLSICPDRALDEARRLDA
Ga0306926_1068570013300031954SoilMNLKNITADKLVALYKNRDLTVTEVITNVYEEIDRTDPDVHAFMSLCRDRA
Ga0307471_10389787013300032180Hardwood Forest SoilMNLKNITADKLVALYKNRDLTVTEVITNVYDEIEHTDR
Ga0307472_10127954833300032205Hardwood Forest SoilVNLQNITADKLVGLYKNRDLTASEVITSLYEDIERTGKDVRA
Ga0306920_10092486513300032261SoilMNLKNITADKLVALYRNRDLTVTEVIKGVYDSIERVDKDVRAFLSICPDRALDEARRLDAQIA
Ga0310914_1135853633300033289SoilMNLKNITADKLVALYKNRDLTVTEVIKSVYEEIDRVDGKVKAFLALC
Ga0314793_077937_512_6553300034668SoilMNLKNITADKLVALYKNRDLTVTEVIKSVYEEIDRVDKDVRAFISLCP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.