Metagenome / Metatranscriptome Family F095458

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095458
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	59 residues
Representative Sequence	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPESKLA
Number of Associated Samples	76
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.76 %
% of genes near scaffold ends (potentially truncated)	19.05 %
% of genes from short scaffolds (< 2000 bps)	60.00 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.476 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (32.381 % of family members)
Environment Ontology (ENVO)	Unclassified (60.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.05% β-sheet: 34.48% Coil/Unstructured: 57.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.34.14.1: PAZ domain	d1u04a1	1u04	0.68
b.34.2.0: SH3-domain	d1x6ga1	1x6g	0.66
b.34.12.1: BAH domain	d3pt9a1	3pt9	0.66
b.34.2.1: SH3-domain	d2v1ra_	2v1r	0.65
b.34.2.1: SH3-domain	d3rnja1	3rnj	0.65

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF14279	HNH_5	11.54
PF00301	Rubredoxin	4.81
PF16861	Carbam_trans_C	3.85
PF00487	FA_desaturase	2.88
PF01844	HNH	2.88
PF01541	GIY-YIG	1.92
PF07486	Hydrolase_2	1.92
PF06508	QueC	0.96
PF02945	Endonuclease_7	0.96
PF00596	Aldolase_II	0.96
PF07460	NUMOD3	0.96
PF03102	NeuB	0.96
PF02675	AdoMet_dc	0.96
PF10504	DUF2452	0.96
PF02915	Rubrerythrin	0.96
PF12171	zf-C2H2_jaz	0.96
PF01192	RNA_pol_Rpb6	0.96
PF08241	Methyltransf_11	0.96
PF05292	MCD	0.96
PF00782	DSPc	0.96
PF05118	Asp_Arg_Hydrox	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.88
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.88
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	1.92
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.96
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.96
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.96
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.96
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.96
COG0519	GMP synthase, PP-ATPase domain/subunit	Nucleotide transport and metabolism [F]	0.96
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.96
COG0780	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamily	Translation, ribosomal structure and biogenesis [J]	0.96
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	0.96
COG1606	ATP-utilizing enzyme, PP-loop superfamily	General function prediction only [R]	0.96
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	0.96
COG2089	Sialic acid synthase SpsE, contains C-terminal SAF domain	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
All Organisms	root	All Organisms	49.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Viruses	superkingdom	All Organisms → Viruses	43.81 %
cellular organisms	root	All Organisms → cellular organisms	5.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	34.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	34.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	34.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	34.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.95 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	30.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.95 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.48 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	30.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.57 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.95 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000558\|Draft_10099400	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1978	Open in IMG/M
3300000558\|Draft_10379259	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9006	Open in IMG/M
3300000558\|Draft_11446494	Not Available	553	Open in IMG/M
3300001968\|GOS2236_1041200	Not Available	714	Open in IMG/M
3300002306\|B570J29618_1008810	Not Available	632	Open in IMG/M
3300002408\|B570J29032_109830245	All Organisms → Viruses → Predicted Viral	1520	Open in IMG/M
3300002471\|metazooDRAFT_1418586	Not Available	526	Open in IMG/M
3300002476\|metazooDRAFT_10784705	Not Available	569	Open in IMG/M
3300002476\|metazooDRAFT_10898965	All Organisms → Viruses → Predicted Viral	1162	Open in IMG/M
3300002835\|B570J40625_100518284	Not Available	1115	Open in IMG/M
3300002835\|B570J40625_100678875	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	926	Open in IMG/M
3300003431\|JGI25913J50563_1039075	Not Available	731	Open in IMG/M
3300003806\|Ga0007864_1002184	All Organisms → Viruses	2078	Open in IMG/M
3300003852\|Ga0031655_10001050	Not Available	16738	Open in IMG/M
3300003852\|Ga0031655_10001050	Not Available	16738	Open in IMG/M
3300004774\|Ga0007794_10065753	Not Available	1080	Open in IMG/M
3300005581\|Ga0049081_10063590	Not Available	1388	Open in IMG/M
3300005662\|Ga0078894_10911800	Not Available	761	Open in IMG/M
3300005805\|Ga0079957_1000258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	45436	Open in IMG/M
3300005805\|Ga0079957_1006408	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9420	Open in IMG/M
3300005805\|Ga0079957_1028066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3772	Open in IMG/M
3300005805\|Ga0079957_1107354	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1507	Open in IMG/M
3300006107\|Ga0007836_1014948	All Organisms → Viruses → Predicted Viral	1683	Open in IMG/M
3300006112\|Ga0007857_1011681	Not Available	1982	Open in IMG/M
3300006484\|Ga0070744_10197505	Not Available	573	Open in IMG/M
3300006641\|Ga0075471_10354552	Not Available	741	Open in IMG/M
3300007708\|Ga0102859_1249353	Not Available	532	Open in IMG/M
3300008072\|Ga0110929_1032452	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1707	Open in IMG/M
3300008116\|Ga0114350_1131779	Not Available	732	Open in IMG/M
3300008267\|Ga0114364_1109338	Not Available	844	Open in IMG/M
3300009068\|Ga0114973_10015598	Not Available	4796	Open in IMG/M
3300009068\|Ga0114973_10163380	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1232	Open in IMG/M
3300009068\|Ga0114973_10691332	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	519	Open in IMG/M
3300009151\|Ga0114962_10008595	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7663	Open in IMG/M
3300009151\|Ga0114962_10023820	Not Available	4282	Open in IMG/M
3300009151\|Ga0114962_10113410	Not Available	1671	Open in IMG/M
3300009151\|Ga0114962_10431862	Not Available	707	Open in IMG/M
3300009151\|Ga0114962_10618143	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	561	Open in IMG/M
3300009152\|Ga0114980_10020738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4108	Open in IMG/M
3300009154\|Ga0114963_10078445	All Organisms → Viruses → Predicted Viral	2051	Open in IMG/M
3300009154\|Ga0114963_10260331	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	980	Open in IMG/M
3300009155\|Ga0114968_10009828	All Organisms → cellular organisms → Bacteria	6898	Open in IMG/M
3300009159\|Ga0114978_10809494	Not Available	528	Open in IMG/M
3300009164\|Ga0114975_10290846	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	907	Open in IMG/M
3300009164\|Ga0114975_10440033	Not Available	707	Open in IMG/M
3300009182\|Ga0114959_10033230	Not Available	3123	Open in IMG/M
3300009184\|Ga0114976_10063138	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2161	Open in IMG/M
3300009187\|Ga0114972_10274517	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1008	Open in IMG/M
3300009194\|Ga0114983_1129327	Not Available	547	Open in IMG/M
3300009419\|Ga0114982_1198684	Not Available	621	Open in IMG/M
3300010157\|Ga0114964_10176920	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1030	Open in IMG/M
3300010158\|Ga0114960_10063732	Not Available	2139	Open in IMG/M
3300010354\|Ga0129333_10012222	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8142	Open in IMG/M
3300010354\|Ga0129333_10024338	All Organisms → cellular organisms → Bacteria → Proteobacteria	5738	Open in IMG/M
3300010354\|Ga0129333_10047036	Not Available	4052	Open in IMG/M
3300010354\|Ga0129333_10087261	Not Available	2887	Open in IMG/M
3300010354\|Ga0129333_10942615	Not Available	728	Open in IMG/M
3300010354\|Ga0129333_11095785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	665	Open in IMG/M
3300010388\|Ga0136551_1086383	Not Available	554	Open in IMG/M
3300010885\|Ga0133913_10078452	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8856	Open in IMG/M
3300010885\|Ga0133913_10135644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6588	Open in IMG/M
3300010885\|Ga0133913_11095867	Not Available	2051	Open in IMG/M
3300012663\|Ga0157203_1002300	Not Available	4318	Open in IMG/M
3300012663\|Ga0157203_1017756	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300012755\|Ga0138281_1162121	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	596	Open in IMG/M
3300013006\|Ga0164294_10001754	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	19830	Open in IMG/M
3300014962\|Ga0134315_1001304	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4763	Open in IMG/M
3300014962\|Ga0134315_1007476	Not Available	1784	Open in IMG/M
3300019093\|Ga0187843_10006677	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6551	Open in IMG/M
3300020048\|Ga0207193_1080912	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3094	Open in IMG/M
3300020048\|Ga0207193_1231266	Not Available	1420	Open in IMG/M
3300020151\|Ga0211736_10262221	Not Available	525	Open in IMG/M
3300020527\|Ga0208232_1002564	All Organisms → Viruses → Predicted Viral	3217	Open in IMG/M
3300020531\|Ga0208487_1041728	Not Available	520	Open in IMG/M
3300020539\|Ga0207941_1001364	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6322	Open in IMG/M
3300020564\|Ga0208719_1082246	Not Available	549	Open in IMG/M
3300022744\|Ga0228700_1042085	Not Available	1023	Open in IMG/M
3300022748\|Ga0228702_1135116	Not Available	548	Open in IMG/M
3300022752\|Ga0214917_10215423	Not Available	930	Open in IMG/M
3300023708\|Ga0228709_1051439	Not Available	843	Open in IMG/M
3300025357\|Ga0208383_1000618	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6191	Open in IMG/M
3300025595\|Ga0208248_1053882	Not Available	912	Open in IMG/M
3300025872\|Ga0208783_10353148	Not Available	575	Open in IMG/M
3300027708\|Ga0209188_1025079	Not Available	2956	Open in IMG/M
3300027708\|Ga0209188_1094251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1215	Open in IMG/M
3300027712\|Ga0209499_1008210	Not Available	5558	Open in IMG/M
3300027733\|Ga0209297_1061651	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1671	Open in IMG/M
3300027736\|Ga0209190_1006269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	7513	Open in IMG/M
3300027749\|Ga0209084_1007537	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7007	Open in IMG/M
3300027764\|Ga0209134_10022389	All Organisms → Viruses → Predicted Viral	2007	Open in IMG/M
3300027772\|Ga0209768_10306618	Not Available	665	Open in IMG/M
3300027896\|Ga0209777_10002453	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24385	Open in IMG/M
3300027963\|Ga0209400_1000657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	29970	Open in IMG/M
3300027963\|Ga0209400_1009365	Not Available	6317	Open in IMG/M
3300027974\|Ga0209299_1061368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1541	Open in IMG/M
3300028394\|Ga0304730_1329765	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514	Open in IMG/M
3300031758\|Ga0315907_10127025	Not Available	2173	Open in IMG/M
3300031758\|Ga0315907_11220723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	525	Open in IMG/M
3300031784\|Ga0315899_10009518	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10443	Open in IMG/M
3300033994\|Ga0334996_0134050	Not Available	1399	Open in IMG/M
3300034021\|Ga0335004_0744113	Not Available	500	Open in IMG/M
3300034066\|Ga0335019_0550922	Not Available	682	Open in IMG/M
3300034071\|Ga0335028_0127700	All Organisms → Viruses → Predicted Viral	1639	Open in IMG/M
3300034096\|Ga0335025_0225393	All Organisms → Viruses → Predicted Viral	1041	Open in IMG/M
3300034106\|Ga0335036_0000369	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	40196	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Engineered	Engineered	2.86%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.24%
Wastewater	Engineered → Wastewater	2.86%
Terrestrial	Environmental → Terrestrial	1.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	84.76%
Marine	Environmental → Aquatic → Marine	10.48%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	2.86%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.90%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	49.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.81%
Coastal	Environmental → Aquatic → Marine → Coastal	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.81%
Creek	Environmental → Aquatic → Freshwater → Creek	2.86%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	2.86%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.90%
Pond	Environmental → Aquatic → Freshwater → Pond	0.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	47.62%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	11.43%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	9.52%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.81%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	2.86%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	2.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.95%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	32.38%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.62%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	6.67%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.81%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	3.81%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	2.86%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.86%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.86%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	2.86%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	2.86%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.90%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	1.90%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.95%
Water Bodies	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies	0.95%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.95%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.95%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.95%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000558	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300001968	Marine microbial communities from Lake Gatun, Panama - GS020	Environmental	Open in IMG/M
3300002306	Freshwater microbial communities from Lake Mendota, WI - 31AUG2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002471	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAY 2013	Environmental	Open in IMG/M
3300002476	Freshwater microbial communities from San Paulo Zoo lake, Brazil - NOV 2012	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300003806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006107	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008072	Microbial Communities in Water bodies, Singapore - Site MA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012755	Freshwater microbial communities from Lake Montjoie, Canada - M_140807_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300014962	Surface water microbial communities from Bangladesh - BaraHaldiaSW0309	Environmental	Open in IMG/M
3300019093	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020531	Freshwater microbial communities from Lake Mendota, WI - 21SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020564	Freshwater microbial communities from Lake Mendota, WI - 30JUL2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300022744	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 3-17_Aug_MG	Environmental	Open in IMG/M
3300022748	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MG	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023708	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025595	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_100994002	3300000558	Hydrocarbon Resource Environments	MKTVILENIYNKEKFTCSNLKDVRMIDGIEYLRVFKFGTQRDVLIRKDTLKKTGKK*
Draft_1037925915	3300000558	Hydrocarbon Resource Environments	MKTMYFENIRTKERFYCKNTKDIQLIDGIEFLRVFRLGTQRDVLVKKDTLTKIAEPK*
Draft_114464942	3300000558	Hydrocarbon Resource Environments	MKRVYFENIRNKEKFYCTDTKEVLTIDGVEYLRVFRFGTQRDCLVKKETLRKVPEPK*
GOS2236_10412003	3300001968	Marine	MKTIYFENIRNKEKFYCKDLKKTQMIDGIEYLRVFRMGTQHDCLVKKESLKKIPEPK*
B570J29618_10088101	3300002306	Freshwater	VILIGDTNTENEMKTVYFENMRNKEKFFCKNMKDIQKIDGVDYLRVFRMGTQRDCLVKLDSLRKIPETK*
B570J29032_1098302454	3300002408	Freshwater	MKTVYFENMRNKEKFFCKNMKDIQKIDGVDYLRVFRMGTQRDCLVKLDSLRKIPETK*
metazooDRAFT_14185862	3300002471	Lake	MKAVYFENPRNHEKFECHDLKDVRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLSKNEKLMWS*
metazooDRAFT_107847053	3300002476	Lake	MKTVYFESYRNKEKFECHNINDIRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLSKSEKVK
metazooDRAFT_108989653	3300002476	Lake	MKTVYFENLRNKEKFECHNINDIRIIDGIEYLRVFKFGTNRDCLVRKDQLKKLGKNKS*
B570J40625_1005182842	3300002835	Freshwater	MKTTYFENMRNKEKFFCKNLKDIQMIDGVEYLRVFRFDTKRECLVKKESLRKITEPN*
B570J40625_1006788751	3300002835	Freshwater	STPAISTNNGVEKMKTIYFENIRNRERFYCNNTKDIQLIDGVEYLRVFKLGTQRDCLIKKETLKKIPEPK*
JGI25913J50563_10390751	3300003431	Freshwater Lake	MKTVYFENVRNHEKFFCKNLKDIQKIDGIDYLRVFKMGTQRDCLVKLDSLRKIPETK*
Ga0007864_10021846	3300003806	Freshwater	MKITYFENMRNKEKFFCKDLKDIQMIDGVEYLRVFRFENKRECLVKKDSLRKTVEPKKI*
Ga0031655_1000105015	3300003852	Freshwater Lake Sediment	MKITYFENMRNKDKFFCKDLKDIQMIDGVEYLRVFRFENKRECLVKKDSLRKIVEPK*
Ga0031655_100010509	3300003852	Freshwater Lake Sediment	MKTTYFENVRNHEKFFCKNLKDIQKIDGVDYLRVFRLGTQRDCLVKLDSLRKIPEQK*
Ga0007794_100657533	3300004774	Freshwater	MKTVYFENVRNHEKFFCKNLKDIQTIDGVDYIRVFKLGTQRDCLVKLDSLRKIPETK*
Ga0049081_100635904	3300005581	Freshwater Lentic	MKTLFFENVFNKEKFYCKDTKDIRVIDGIEYLRVFKDGTQRDCLVKKDSLRKVQEKK*
Ga0078894_109118001	3300005662	Freshwater Lake	MKTVFFENVFNREKFYCKDTKDIRIIDGIEYLRVFRDGTQRDCLVKKDSLKKVPEKK*
Ga0079957_100025872	3300005805	Lake	MKTVYFENPRNHEKFECHDLKDVRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLSKNEKPM
Ga0079957_100640814	3300005805	Lake	MKTVYFENMRNKEKFFCKNLKDIQKIDGVDYLRVFRMETQRECLVKLDSLRKIPQIK*
Ga0079957_10280663	3300005805	Lake	MKTVTFESVYNKEKFTCNGKSLQDVRVIDGIEYLRVFKFGTQREVLVRKDTLKRVSKK*
Ga0079957_11073544	3300005805	Lake	MKTVYFESYRNKEKFECRNLNDVRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLTKNEKPM
Ga0007836_10149481	3300006107	Freshwater	NMRNKEKFFCKDLKDIQMIDGVEYLRVFRFENKRECLVKKYSLRKTVEPKKI*
Ga0007857_10116812	3300006112	Freshwater	MKTTYFENMRNKEKFFCKDLKDIQMIDGIEYLRVFRFDTKRECLVKKESLRKVSQPKL*
Ga0070744_101975051	3300006484	Estuarine	KTTYFENMRNKEKFFCKDLKDIQMIDGIEYLKVFRFETKRECLVKKESLRKVAEPKI*
Ga0075471_103545524	3300006641	Aqueous	MEIIMKTIFFENVMNKDKFYCNNTKDIRVIDGIEYLRVFRYGTQRDCLVKKESLRKVSDKK*
Ga0102859_12493534	3300007708	Estuarine	SLILIGDTNTENEMKTVYFENMRNKEKFFCKNMKDIQKIDGVDYLRVFRMGTQRDCLVKLDILRKIPETK*
Ga0110929_10324521	3300008072	Water Bodies	MKTIVFENIWNKEKFTCPDPKDIRSIDGVEYLRVFKFGTNREVLVKKESLHKVKN*
Ga0114350_11317791	3300008116	Freshwater, Plankton	MKTVVFENIVNKEKFQCHNTKDIQIIDGIEYLRVFKYGTQRDCLVKKDSLKKIVEKRA*
Ga0114364_11093382	3300008267	Freshwater, Plankton	MKTLFFENVFNKEKFYCKNTKDIRVIDGIEYLRVFRDGTQRDCLVKKDSLRKVQEKK*
Ga0114973_100155986	3300009068	Freshwater Lake	VFILGEIMKTMYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKISESKLHP*
Ga0114973_101633802	3300009068	Freshwater Lake	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPESKLDSMR*
Ga0114973_106913323	3300009068	Freshwater Lake	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPESKLA*
Ga0114962_100085958	3300009151	Freshwater Lake	MKTLYFENIRNRERFYCKNIKDIQQIDGVDYLRVFRMGTQRDCLVKKDILKKIAEPKK*
Ga0114962_100238205	3300009151	Freshwater Lake	MKTTYFENLVNREKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIPESKLA*
Ga0114962_101134103	3300009151	Freshwater Lake	MYFENLVNKEKYLCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIPESKPA*
Ga0114962_104318622	3300009151	Freshwater Lake	MKAYYFENLLNKEQFICRDLTDVRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPENKIKPAK*
Ga0114962_106181432	3300009151	Freshwater Lake	MKAYYFENLLNKEKFICRDLSDVRMIDGIEYLRVFKYGTQRDCLVRKDSLKKIPESKINPTK*
Ga0114980_100207385	3300009152	Freshwater Lake	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKIPESKLA*
Ga0114963_100784456	3300009154	Freshwater Lake	MKTLYFENIRNRERFYCKNIKDIQQIDGVDYLRVFRMGTQRDCLVKKDILKKIAEPK
Ga0114963_102603311	3300009154	Freshwater Lake	MKTMYFENLVNKEKYLCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIPESKPA*
Ga0114968_100098289	3300009155	Freshwater Lake	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKIPESKLI*
Ga0114978_108094943	3300009159	Freshwater Lake	MKTLFFENVFNKEKFYCKDTKDIRIIDGIEYLRVFKDGTQRDCLVKKDSLKKVPEKK*
Ga0114975_102908461	3300009164	Freshwater Lake	TYFENLVNKEKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPESKLA*
Ga0114975_104400333	3300009164	Freshwater Lake	MKTLFFENVFNKEKFYCKDTKDIRVIDGIEYLRVFKDGTQRDCLVKKDSLRKVKEKK*
Ga0114959_100332305	3300009182	Freshwater Lake	MKTTYFENLVNREKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIPESKPA*
Ga0114976_100631387	3300009184	Freshwater Lake	KTTYFENLVNKEKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPESKLA*
Ga0114972_102745172	3300009187	Freshwater Lake	LGQILAQDPRVFILGEIMKTMYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKISESKLHP*
Ga0114983_11293273	3300009194	Deep Subsurface	MKTVYFENMRNKEKFFCKNLKDIQKIDGVDYLRVFRMETQRECLVKLDSLRKIPQTK*
Ga0114982_11986844	3300009419	Deep Subsurface	MKKVFFENIVNKEKFFCSNLKDIRVIDGIEYMRVFKFGTQRDCLI
Ga0114964_101769202	3300010157	Freshwater Lake	MKAYYFENLLNKEQFICRDLTDVRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPEKKIKPAK*
Ga0114960_100637321	3300010158	Freshwater Lake	MKTTYFENLVNREKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIPESK
Ga0129333_1001222222	3300010354	Freshwater To Marine Saline Gradient	MKTVYFENYRNHEKFECRDLKDVRVIDGIEYLRVFRFGTQRDCLVRKDQLRKLSKNEKPM
Ga0129333_100243385	3300010354	Freshwater To Marine Saline Gradient	MKIVYFENIRNGEKFYCRNLKDIQKIDGTEYLRVFKFGTQRDCLVKKDILKKIAEPK*
Ga0129333_1004703613	3300010354	Freshwater To Marine Saline Gradient	MKTVYFENYRNKEKFECHNVNDVRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLSKNEKIK
Ga0129333_100872613	3300010354	Freshwater To Marine Saline Gradient	MKTVYFESYRNKEKFECHNLKDVRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLNKNEKP*
Ga0129333_109426152	3300010354	Freshwater To Marine Saline Gradient	MKTVYFESYRNKEKFECRNLSDVRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLGKNEKPM
Ga0129333_110957852	3300010354	Freshwater To Marine Saline Gradient	MKTVTFESVYNKEKFTCNGKSLQDVRVIDGIEYLRVFKFGTQREVLVRKDTLKKVSNKR*
Ga0136551_10863835	3300010388	Pond Fresh Water	MKTIYFENLRNKERFYCKDIKDIQLIDGVEYIRVFRLGTQRDCLVKKESLRKIP
Ga0133913_100784523	3300010885	Freshwater Lake	MKAYYFENLLNKEQFICRDLNDVRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPEKKIKPAK*
Ga0133913_101356449	3300010885	Freshwater Lake	MKAYYFENLLIKEKGISQNLTDVRMIDGIEYLRVFKYGTQRDCLVR
Ga0133913_110958676	3300010885	Freshwater Lake	ENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKIPESKLI*
Ga0157203_100230014	3300012663	Freshwater	MKTTYFENVMNREKFYCRDTKDIRVIDGIEYLRVFRDGTQRDCLIKKDSLRKVSEKK*
Ga0157203_10177564	3300012663	Freshwater	MKTLFFENVFNKEKFYCKDTKDIRVIDGIEYLRVFKDGTQRDCLVKKDSLKKVPEKK*
Ga0138281_11621213	3300012755	Freshwater Lake	VFILGVIMKTMYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKISESKLHP*
Ga0164294_1000175420	3300013006	Freshwater	MKAYYFENLLNKEKFICRDLTDVRMIDGVEYLRVFKYGTQRDCLVRKDSLKKIPESKINPAK*
Ga0134315_10013043	3300014962	Surface Water	MKSITLENIYNKEKFTCTNRNDVTVIEGIEYLRVFKFGTQKDVLVRKDYLKRINEKR*
Ga0134315_10074763	3300014962	Surface Water	MKTVYFENMRNRERFYCTNLQDVQRIDGVEYLRVFREGTQRDCLVKRELLKKIPAPKK*
Ga0187843_1000667712	3300019093	Freshwater	VSILGEIMKTMYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKISESKLHP
Ga0207193_10809127	3300020048	Freshwater Lake Sediment	MKTVYFENMRNKEKFFCKNLKDIQKIDGVDYLRVFRMETQRECLVKLDSLRKIPQTK
Ga0207193_12312664	3300020048	Freshwater Lake Sediment	MKKVFFENIVNKEKFFCSNLKDIRVIDGIEYMRVFKFGTQRDCLIKKDSLRKISEPK
Ga0211736_102622212	3300020151	Freshwater	MKTLFFENVFNKEKFYCKNTKDIRVIDGIEYLRVFRDGTQRDCLVKKDSLRKVQEKK
Ga0208232_10025648	3300020527	Freshwater	MKTVYFENMRNKEKFFCKNMKDIQKIDGVDYLRVFRMGTQRDCLVKLDILRKIPETK
Ga0208487_10417281	3300020531	Freshwater	LILIGDTNTENEMKTVYFENMRNKEKFFCKNMKDIQKIDGVDYLRVFRMGTQRDCLVKLDSLRKIPETK
Ga0207941_10013648	3300020539	Freshwater	MKTVYFENMRNKEKFFCKNMKDIQKIDGVDYLRVFRMGTQRDCLVKLDSLRKIPETK
Ga0208719_10822461	3300020564	Freshwater	MKTLFFENVFNKEKFYCKDTKDIRVIDGIEYLRVFKDGTQRDCLVKKDSLRKVQEKK
Ga0228700_10420854	3300022744	Freshwater	MKTIYFENVRNKEKFFCKNLKDIQKIDGVDYLRVFKMGTQRDCLVKLDSLRKIPETK
Ga0228702_11351161	3300022748	Freshwater	MKTIYFENVRNKEKFFCKNLKDIQKIDGVDYLRVFKMGTQRDCLVKLDSLRKIP
Ga0214917_102154232	3300022752	Freshwater	MKTVYFENYRNHERFECRNLQDVKIIDGIEYLRVFRLGTQRDCLVRRDQLKKLGKSEVIKLK
Ga0228709_10514392	3300023708	Freshwater	MKTIYFENLRNKEKFYCKDTKDIQMIDGIEYLRVFRLGTQRDCLVKKDSLRKVSEPK
Ga0208383_100061814	3300025357	Freshwater	MKITYFENMRNKEKFFCKDLKDIQMIDGVEYLRVFRFENKRECLVKKDSLRKTVEPKKI
Ga0208248_10538824	3300025595	Freshwater	MKTVYFENVRNHEKFFCKNLKDIQTIDGVDYIRVFKLGTQRDCLVKLDSLRKIPETK
Ga0208783_103531481	3300025872	Aqueous	MKTIFFENVMNKDKFYCNNTKDIRVIDGIEYLRVFRYGTQRDCLVKKESLRKVSDKK
Ga0209188_10250795	3300027708	Freshwater Lake	MKTTYFENLVNREKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIPESKLA
Ga0209188_10942513	3300027708	Freshwater Lake	MKTMYFENLVNKEKYLCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIPESKPA
Ga0209499_100821010	3300027712	Freshwater Lake	MKTMYFENLVNKEKYLCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKRIP
Ga0209297_10616512	3300027733	Freshwater Lake	MKTMYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKISESKLHP
Ga0209190_10062697	3300027736	Freshwater Lake	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYLRVFKYGTQRDCLVRKDSLKKIPESKLDSMR
Ga0209084_100753728	3300027749	Freshwater Lake	MKTLYFENIRNRERFYCKNIKDIQQIDGVDYLRVFRMGTQRDCLVKKDILKKIAEPKK
Ga0209134_100223895	3300027764	Freshwater Lake	MKTVYFENVRNHEKFFCKNLKDIQKIDGIDYLRVFKMGTQRDCLVKLDSLRKIPETK
Ga0209768_103066181	3300027772	Freshwater Lake	FFENVFNKEKFYCKDTKDIRVIDGIEYLRVFKDGTQRDCLVKKDSLRKVQEKK
Ga0209777_1000245314	3300027896	Freshwater Lake Sediment	MKITYFENMRNKDKFFCKDLKDIQMIDGVEYLRVFRFENKRECLVKKDSLRKIVEPK
Ga0209400_100065720	3300027963	Freshwater Lake	LGQILAQDPRVFILGEIMKTMYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKISESKLHP
Ga0209400_10093659	3300027963	Freshwater Lake	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKIPESKLV
Ga0209299_10613682	3300027974	Freshwater Lake	MKTTYFENLVNKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKIPESKLA
Ga0304730_13297652	3300028394	Freshwater Lake	VSKEKYSCKNPNDIRLIDGIEYMRVFKYGTQRECLVRKDSLKKIPESKLV
Ga0315907_101270255	3300031758	Freshwater	MKTVVFENIVNKEKFQCHNTKDIQIIDGIEYLRVFKYGTQRDCLVKKDSLKKIVEKRA
Ga0315907_112207231	3300031758	Freshwater	MKTVTFESVYNKEKFTCNGKSLQDVRVIDGIEYLRVFKFGTQREVLVRKDTLKRVS
Ga0315899_1000951827	3300031784	Freshwater	MKTVFFENVFNREKFYCKDTKDIRIIDGIEYLRVFRDGTQRDCLVKKDSLKKVPEKK
Ga0334996_0134050_1168_1341	3300033994	Freshwater	MKTIYFENIRNRERFYCNNTKDIQLIDGVEYLRVFKLGTQRDCLIKKETLKKIPEPK
Ga0335004_0744113_1_174	3300034021	Freshwater	MKTVYFENYRNHEKFECRDLKDVRVIDGIEYLRVFRFGTQRDCLVRKDQLRKLSKNEK
Ga0335019_0550922_45_218	3300034066	Freshwater	MKTTYFENMRNKEKFFCKNLKDIQMIDGVEYLRVFRFDTKRECLVKKESLRKITEPN
Ga0335028_0127700_1247_1426	3300034071	Freshwater	MKTVTFESVYNKEKFTCNGKSLQDVRVIDGIEYLRVFKFGTQREVLVRKDTLKKVSSKR
Ga0335025_0225393_606_788	3300034096	Freshwater	MKTVYFENYRNHEKFECRDLKDVRVIDGIEYLRVFRFGTQRDCLVRKDQLRKLSKNEKLK
Ga0335036_0000369_18079_18258	3300034106	Freshwater	MKTVYFESYRNKEKFECHNLKDVRVIDGIEYLRVFKFGTQRDCLVRKDQLRKLNKNEKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095458

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences