Metagenome / Metatranscriptome Family F095618

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095618
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	98 residues
Representative Sequence	TFFNTLYMFRKPGILLRTFSHRATNFRPNILVTITPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK
Number of Associated Samples	88
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	88.57 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.762 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (34.286 % of family members)
Environment Ontology (ENVO)	Unclassified (85.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (81.905 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.00% Coil/Unstructured: 75.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00557	Peptidase_M24	66.67
PF01435	Peptidase_M48	11.43
PF09365	DUF2461	1.90
PF02635	DrsE	0.95
PF00970	FAD_binding_6	0.95
PF04389	Peptidase_M28	0.95
PF01425	Amidase	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.76 %
Unclassified	root	N/A	35.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.76 %
Unclassified	root	N/A	35.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.76 %
Unclassified	root	N/A	35.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.86 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	14.29 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	5.71 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	2.86 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Candidatus Pseudothioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus	9.52 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	5.71 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	4.76 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	2.86 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Candidatus Pseudothioglobus singularis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	9.52 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	5.71 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	4.76 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2.86 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Candidatus Pseudothioglobus singularis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	9.52 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	5.71 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	4.76 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	2.86 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Candidatus Pseudothioglobus singularis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	9.52 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	5.71 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	4.76 %
Candidatus Pelagibacter sp. TMED153	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED153	2.86 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.24 %
Candidatus Pseudothioglobus singularis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	9.52 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	5.71 %
Candidatus Thioglobus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	4.76 %
Candidatus Pelagibacter sp. TMED153	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED153	2.86 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000196\|LPaug09P162000mDRAFT_c1022400	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300000222\|LPjun09P12500mDRAFT_1003769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3856	Open in IMG/M
3300000322\|LPaug08P121000mDRAFT_1034678	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300000323\|LPaug09P202000mDRAFT_1031805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	762	Open in IMG/M
3300002221\|JGI24817J26689_1050023	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300002526\|JGI24818J35693_1044817	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300002913\|JGI26060J43896_10023203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1954	Open in IMG/M
3300003510\|FS857DNA_1011205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	810	Open in IMG/M
3300003537\|FS903DNA_1024416	Not Available	1118	Open in IMG/M
3300005398\|Ga0066858_10215901	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005399\|Ga0066860_10220200	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005399\|Ga0066860_10224545	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300005400\|Ga0066867_10063378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1431	Open in IMG/M
3300005401\|Ga0066857_10015065	Not Available	2791	Open in IMG/M
3300005401\|Ga0066857_10033177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1859	Open in IMG/M
3300005401\|Ga0066857_10197149	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005402\|Ga0066855_10055348	Not Available	1206	Open in IMG/M
3300005402\|Ga0066855_10242871	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005402\|Ga0066855_10324944	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005423\|Ga0066828_10173464	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005426\|Ga0066847_10105252	Not Available	881	Open in IMG/M
3300005427\|Ga0066851_10028882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1992	Open in IMG/M
3300005428\|Ga0066863_10073765	Not Available	1259	Open in IMG/M
3300005508\|Ga0066868_10073362	Not Available	1083	Open in IMG/M
3300005509\|Ga0066827_10068535	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005592\|Ga0066838_10026361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1667	Open in IMG/M
3300005594\|Ga0066839_10032540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1820	Open in IMG/M
3300005603\|Ga0066853_10058313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1331	Open in IMG/M
3300005605\|Ga0066850_10041761	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300005658\|Ga0066842_10097627	Not Available	549	Open in IMG/M
3300006011\|Ga0066373_10154824	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300006308\|Ga0068470_1171872	Not Available	1221	Open in IMG/M
3300006308\|Ga0068470_1502552	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006310\|Ga0068471_1632640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1334	Open in IMG/M
3300006311\|Ga0068478_1209123	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006336\|Ga0068502_1213304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1879	Open in IMG/M
3300006341\|Ga0068493_10667337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1711	Open in IMG/M
3300006345\|Ga0099693_1519562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED153	959	Open in IMG/M
3300006352\|Ga0075448_10196961	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300007160\|Ga0099959_1141245	Not Available	936	Open in IMG/M
3300007725\|Ga0102951_1022409	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1987	Open in IMG/M
3300009103\|Ga0117901_1071481	Not Available	2170	Open in IMG/M
3300010300\|Ga0129351_1231583	Not Available	710	Open in IMG/M
3300012528\|Ga0129352_11013812	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012928\|Ga0163110_10893420	Not Available	703	Open in IMG/M
3300012936\|Ga0163109_10588269	Not Available	815	Open in IMG/M
3300020243\|Ga0211655_1015316	Not Available	1149	Open in IMG/M
3300020243\|Ga0211655_1023865	Not Available	835	Open in IMG/M
3300020244\|Ga0211710_1025165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	859	Open in IMG/M
3300020262\|Ga0211537_1006729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	3036	Open in IMG/M
3300020327\|Ga0211573_1056451	Not Available	986	Open in IMG/M
3300020327\|Ga0211573_1131995	Not Available	557	Open in IMG/M
3300020373\|Ga0211660_10026977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	2770	Open in IMG/M
3300020373\|Ga0211660_10252881	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300020375\|Ga0211656_10039231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	1574	Open in IMG/M
3300020383\|Ga0211646_10018277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	2876	Open in IMG/M
3300020383\|Ga0211646_10283580	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300020415\|Ga0211553_10138126	Not Available	1003	Open in IMG/M
3300020426\|Ga0211536_10238357	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300020427\|Ga0211603_10155239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	851	Open in IMG/M
3300020428\|Ga0211521_10159699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED153	1049	Open in IMG/M
3300020435\|Ga0211639_10249626	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300020435\|Ga0211639_10272394	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021068\|Ga0206684_1126873	Not Available	852	Open in IMG/M
3300021087\|Ga0206683_10384919	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300021087\|Ga0206683_10462263	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021089\|Ga0206679_10308887	Not Available	857	Open in IMG/M
3300021342\|Ga0206691_1286243	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300021442\|Ga0206685_10116272	Not Available	887	Open in IMG/M
3300021791\|Ga0226832_10211620	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300022227\|Ga0187827_10186043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1425	Open in IMG/M
3300025265\|Ga0208467_1012182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thioglobus	1753	Open in IMG/M
3300025397\|Ga0209290_1064064	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300025863\|Ga0208833_1020826	Not Available	1252	Open in IMG/M
3300026082\|Ga0208750_1027242	Not Available	1318	Open in IMG/M
3300026082\|Ga0208750_1038376	Not Available	1059	Open in IMG/M
3300026208\|Ga0208640_1030744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1401	Open in IMG/M
3300026209\|Ga0207989_1057634	Not Available	1057	Open in IMG/M
3300026213\|Ga0208131_1029772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1352	Open in IMG/M
3300026256\|Ga0208639_1038421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1403	Open in IMG/M
3300026259\|Ga0208896_1094877	Not Available	849	Open in IMG/M
3300026260\|Ga0208408_1111935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	797	Open in IMG/M
3300026261\|Ga0208524_1027666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1757	Open in IMG/M
3300027622\|Ga0209753_1083401	Not Available	804	Open in IMG/M
3300027677\|Ga0209019_1124328	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300028192\|Ga0257107_1114688	Not Available	799	Open in IMG/M
3300028487\|Ga0257109_1022550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	2125	Open in IMG/M
3300028535\|Ga0257111_1043253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1504	Open in IMG/M
3300031757\|Ga0315328_10122444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1506	Open in IMG/M
3300031757\|Ga0315328_10644287	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300031775\|Ga0315326_10945198	Not Available	529	Open in IMG/M
3300031811\|Ga0310125_10223521	Not Available	957	Open in IMG/M
3300031861\|Ga0315319_10040692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	2127	Open in IMG/M
3300031861\|Ga0315319_10139598	Not Available	1205	Open in IMG/M
3300031886\|Ga0315318_10342974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	856	Open in IMG/M
3300032011\|Ga0315316_10367055	Not Available	1208	Open in IMG/M
3300032019\|Ga0315324_10048901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Pseudothioglobus → Candidatus Pseudothioglobus singularis	1571	Open in IMG/M
3300032073\|Ga0315315_10226317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED153	1745	Open in IMG/M
3300032130\|Ga0315333_10302508	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300032278\|Ga0310345_11803420	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300032360\|Ga0315334_10353322	Not Available	1235	Open in IMG/M
3300032360\|Ga0315334_10773147	Not Available	831	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.05%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.95%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	58.10%
Unclassified	Environmental → Aquatic → Marine → Unclassified	19.05%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.19%
Coastal	Environmental → Aquatic → Marine → Coastal	2.86%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.86%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	42.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	19.05%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	16.19%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	9.52%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.71%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.86%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	2.86%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	34.29%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	18.10%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	16.19%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	9.52%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.81%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.81%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.90%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.90%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	1.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.95%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.95%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.95%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.95%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.95%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.95%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000196	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 2000m	Environmental	Open in IMG/M
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental	Open in IMG/M
3300000322	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P12 1000m	Environmental	Open in IMG/M
3300000323	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P20 2000m	Environmental	Open in IMG/M
3300002221	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m	Environmental	Open in IMG/M
3300002526	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m	Environmental	Open in IMG/M
3300002913	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003510	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS857_Anemone_DNA	Environmental	Open in IMG/M
3300003537	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS903_Marker113_DNA	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005401	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005428	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005592	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005658	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF86A	Environmental	Open in IMG/M
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006345	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0075m	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300009103	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300020243	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX556050-ERR599055)	Environmental	Open in IMG/M
3300020244	Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556020-ERR599149)	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020298	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX556051-ERR599128)	Environmental	Open in IMG/M
3300020327	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020375	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX555974-ERR599132)	Environmental	Open in IMG/M
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental	Open in IMG/M
3300020415	Marine microbial communities from Tara Oceans - TARA_B100001146 (ERX555973-ERR599166)	Environmental	Open in IMG/M
3300020426	Marine microbial communities from Tara Oceans - TARA_B100000378 (ERX555992-ERR599112)	Environmental	Open in IMG/M
3300020427	Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021342	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025265	Marine microbial communities from the Deep Pacific Ocean - MP2098 (SPAdes)	Environmental	Open in IMG/M
3300025397	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN10B Hudson Canyon (SPAdes)	Environmental	Open in IMG/M
3300025863	Marine microbial communities from the Deep Pacific Ocean - MP1788 (SPAdes)	Environmental	Open in IMG/M
3300026082	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental	Open in IMG/M
3300026213	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73 (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300027622	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m (SPAdes)	Environmental	Open in IMG/M
3300027677	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m (SPAdes)	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032019	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug09P162000mDRAFT_10224001	3300000196	Marine	FSHRATNFRPNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK*
LPjun09P12500mDRAFT_10037691	3300000222	Marine	TFRKPGILLRTFSHRATSFRPNILVTITPVISMTNSTKIIPEPGIVVSKLNRASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
LPaug08P121000mDRAFT_10346782	3300000322	Marine	EVLNTVSETFFNTLYMFRKPGILLRTFSHRATNFRPNMLVTNTPVISMTSNTKIMPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK*
LPaug09P202000mDRAFT_10318051	3300000323	Marine	LLRTFSHRATNFRPNILVTNTPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
JGI24817J26689_10500232	3300002221	Marine	FFNTLYTFLKPGILLRTLSHRATSFRPNMLVTITPVMNMTISTKIIPEPGIAVSKLNRASGRYFCGIRLLISSKKNLITMTVKARGIQKRRPEIK*
JGI24818J35693_10448172	3300002526	Marine	RTLSHRATSFRPNMLVTITPVMNMTISTKIIPEPGIAVSKLNRASGRYFCGIRLLISSKKNLITMTVKARGIQKRRPEIK*
JGI26060J43896_100232033	3300002913	Marine	TFFNTLYMFRKPGILLRTFSHRATNFRPNILVTITPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK*
FS857DNA_10112051	3300003510	Diffuse Hydrothermal Flow Volcanic Vent	FFNTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMTSNTKIIPEPGIVVSNLNMTSGRYFCGIRLLISSKKNLITMTLKARGIQKRRPEIK*
FS903DNA_10244161	3300003537	Diffuse Hydrothermal Flow Volcanic Vent	LLRTFSHRATNFRPNILVTITPVISMTNSTKIIPEPGIVVSKLNRASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
Ga0066858_102159011	3300005398	Marine	KLSVEELNTVSETFFNTLYTFRKPGILWRILSHRATSFRPIKLETITPVMSITANTNIIPDPGKSVFKLNNVSGRYFVGTSLFINSRKNLMTTTLRARGTQKRRPEIK*
Ga0066860_102202002	3300005399	Marine	MFRKPGILLRTLSHRATTFRPNILVTITPVMSMTNSTKIIPEPGIVVSKLNIDSGRYFCGIKLSISSKKNLITMTLKDRGIQKRRPEIK*
Ga0066860_102245452	3300005399	Marine	LSVEVLNTVSETFFNTLYIFRKPGILLRTLSHRDTSFRPNILETITPVTSMTNNTNTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK*
Ga0066867_100633783	3300005400	Marine	SETFFNTLYTFRKPGILLRTLSHRVTSFRPKKLETITPVMSITNNTKIIPDPGKSVFKLNNVSGRYLVGTSSLINSRENLMTITLRARGIQKRRPEIK*
Ga0066857_100150651	3300005401	Marine	ETFFNTLYMFLKPGILLRTLSHRATSFRPSILETITPVTSMIRKTKTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK*
Ga0066857_100331773	3300005401	Marine	VSETFFNTLYMFRKPGILLRTFSHRATSFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK*
Ga0066857_101971492	3300005401	Marine	VEVLNTVSETFFNTLYTFLKPGILLRTFSHSATSFRPNILVTNTPVISMTISTKIIPDPGIVVSKLNIASGKYFCGTRLLISSKKNLITRTVKARGTQKRRPEIK*
Ga0066855_100553482	3300005402	Marine	NTVSETFFNTLYMFRKPGILLRSFSHRATNFRPNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK*
Ga0066855_102428712	3300005402	Marine	KLSVEVLNTVSETFFNTLYMFRKPGILLRTFSHRATSFRPNILVTKTPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
Ga0066855_103249441	3300005402	Marine	ETFFNTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMTSITKIIPEPGIVVSNLNIVSGRYFCGIRLLTSSKKNLMTMTLRARGIQKRRPEIK*
Ga0066828_101734642	3300005423	Marine	TQIPLLGYWIKNAFLKLSVEVLNMVSETFFNTLYTFRNPGILWRILSHSSTSFRPNKLETITPVMSITINTNTIPDPGKLVFKLNNVSGRYFVGTSLFTNSRKNLMTTTLRARGTQKRRPEIK*
Ga0066847_101052521	3300005426	Marine	PGILLRTLSHRDTSFRPNILETITPVTSMTNNTNTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK*
Ga0066851_100288823	3300005427	Marine	KLSVEELNTVSETFFNTLYTFLKPGILWRILSHSSTSFRPNKLETITPVMSITNNTKTIPDPGKSVFKLNNVSGRYFVGTSLFTNSRKNLMTTTLRARGTQKRRPEIK*
Ga0066863_100737652	3300005428	Marine	MVSETFFNTLYTFRNPGILWRILSHSSTSFRPNKLETITPVMSITNNTKTIPDPGKSVFKLNNVSGRYFVGTSLFTNSRKNLMTTTLRARGTQKRRPEIK*
Ga0066868_100733621	3300005508	Marine	FRKPGILLRILSHSATSLRPKKLETITPVMSIIINTKTIPDPGKLVFKLNNVSGMYLVGTNLFISSSENFMTITLRARGTQKRRPEIK*
Ga0066827_100685351	3300005509	Marine	SVEELNTVSETFFNTLYTFRKPGILLRIFSHSATSLRPKKLETITPVMSIIINTKTIPDPGKSVFKLNNVSGMYLVGTNLFINSSENFMTITLRARGTQKRRPEIK*
Ga0066838_100263611	3300005592	Marine	MFLKPGILLRTLSHRATSFRPSILETITPVTSMIRKTKTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK*
Ga0066839_100325403	3300005594	Marine	LNTVSETFFNTLYMFRKPGILLRTLSHRATSFRPNILETITPVTSMTSNTKIIPDPGKSVFKLNKVSGRYFVGIILFKNSKKNLMTMKVRARGIQKRRPEIK*
Ga0066853_100583131	3300005603	Marine	LLGYWIKNAFLKLSVEELNTVSETFFNTLYTFRKPGILWRILSHRATSFRPIKLETITPVMSITANTNIIPDPGKSVFKLNNVSGRYFVGTSLFINSRKNLMTTTLRARGTQKRRPEIK*
Ga0066850_100417613	3300005605	Marine	LSVEELNTVSETFFNTLYTFRKPGILLRILSHSATSLRPKKLETITPVTSITINTKTIPDPGKLVFKLNNVSGMYLVGTNLFISSSENFMTITLRARGTQKRRPEIK*
Ga0066842_100976272	3300005658	Marine	KLSVEELNTVSETFFNTLYTFRKPGILLRILSHMVTSFRPKKLETITPVMSITNNTKTIPDPGKSVFKLNNVSGRYLVGTSSLINSRENLMTITLRARGIQKRRPEIK*
Ga0066373_101548241	3300006011	Marine	NTLYTFLKPGILLRTLSHRATSFRPNMLVTITPVMNMTISTKIIPEPGIAVSKLNRASGRYFCGIRLLISSKKNLITMTVKARGIQKRRPEIK*
Ga0068470_11718721	3300006308	Marine	DKNPETFFNTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
Ga0068470_15025522	3300006308	Marine	EELNTVSETFFNTLYMFRKPGILLRAFSHRATSFRPNMLVTNTPVISMISNTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKTRGIQKRRPEIK*
Ga0068471_16326403	3300006310	Marine	LRTFSHRATNFRPSILVTITPVISMTNNTKIIPEPGIVVSKLNRASGRYFCGTRLLISSKKNLITMTLKARGIQKRRPEIK*
Ga0068478_12091232	3300006311	Marine	EVLNTVSETFFKTLYMFRKPGILLRTFSHRATNFRPNILVTITPVISMINNTKIIPDPGIVVSKLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
Ga0068477_11375261	3300006326	Marine	RATSFRPNILVTITPVISMTNSTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
Ga0068502_12133041	3300006336	Marine	NTFRKPGILLRTFSHSSTTFRPNILVTITPVISMTISTKIIPDPGIVVSKLNIASGKYFCGTRLLISSKKNLITMTVKAKGTQKRRPEIK*
Ga0068493_105923651	3300006341	Marine	HRATNFRPNILVTITPVISMTSNTKIIPEPGIVVSNLNIVSGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK*
Ga0068493_106673373	3300006341	Marine	MFRKPGILLRSFSHRATNFRPNILVTNYPVISMINNTKIIPDPGIVVSKLNIASGRNFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK*
Ga0099693_15195622	3300006345	Marine	LKLDDVFNTVSETFFNMLYMFRKPGILLSNFSHRATNLLPNILVTNIPVISIIKNSRIIPDPGIEVSKLNIASGRYSCGTRLLINSKKNLMTIIVRIKGIQKRSPEIR
Ga0075448_101969612	3300006352	Marine	TFSHRATNFRPNILVTITPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK*
Ga0099959_11412451	3300007160	Marine	TFSHRATNFRPNILVTITPVISMTSNTKIIPEPGIVVSNLKITSGRYFCGTRLLISSKKNLITMTLKARGIQKRRPEIK*
Ga0102951_10224093	3300007725	Water	LYMFRKPGILLSSFSHMVTNLLPNILVTNNPVISNIKNTKIIPDPGIVLSKLNTASGRYFCGIRLLINSKKNLITIILKIRGIQKRRPEIR*
Ga0117901_10714811	3300009103	Marine	KPGILLRIFSHRATNFRPNILVTNTPVISMIINTKIIPDPGIVVSKLNIASGRYFSGTILLISSKKDLITMILKIRGIQKRRPEIK*
Ga0129351_12315831	3300010300	Freshwater To Marine Saline Gradient	SDEVFNTVSDTFFSMLYMFRKPGILFRSFSHKATNLLPNILVINTPVIRIIINNRIIPDPGIVVSKLNIALGKYSCGIILFRNSKKNLITTIVKIKGIQKRSPEIR*
Ga0129352_110138121	3300012528	Aqueous	GILLRSFSHRATNLLPNILVTNTPVISKINNTKIIPEPGMVVSKLNTASGRYFCGIRLLINSKKNLITIILKIRGIQKRRPEIR*
Ga0163110_108934202	3300012928	Surface Seawater	MFLKPGILFKRFSQIATNLRPNIFVTNIPVESIIKNNKIIPDPGIEVSKLNIASGKYFCGTRLLINSKKNLITMMLKIKGIQKRSPEIR*
Ga0163109_105882692	3300012936	Surface Seawater	MFRKPGMLLRSFSHKATNLRPSILVTNTPVIRIIINNNMIPEPGIVVSKLKIASGRYSCGTRLLINSKKNLITTIVKINGIQKRSPEIR*
Ga0211655_10153161	3300020243	Marine	LNPGILWRILSHSSTSFRPNKLETITPVMSITINTNTIPDPGKSVFKLNNVCGRYFVGTSLFTNSRKNLMTTTLRARGTQKRRPEIK
Ga0211655_10238652	3300020243	Marine	LSVEVLNTVSETFFNTLYTFRKPGILLRTFSHRATNFRPNILVTNNPVISMINNTKIIPDPGIVVSKLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0211710_10251652	3300020244	Marine	IKNAFLKLSVEVLNTVSETFFNTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK
Ga0211537_10067291	3300020262	Marine	MFLKPGILLRTLSHRVTSFRPSILETITPVTSMTSKTKTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK
Ga0211657_10262641	3300020298	Marine	GILLRILSHSATSLRPKKLETITPVTSITINTKTIPDPGKLVFKLNNVSGMYLVGTNLFISSSENFMTITLRARGTQKRRPEIK
Ga0211573_10564511	3300020327	Marine	NTLYTFRKPGILLRIFSHSSTSLRPKKLETITPVMSIIINTKTIPDPGKSVFKLNNVSGRYLVGINLFINSSENFMTITLRARGTQKRRPEIK
Ga0211573_11319951	3300020327	Marine	LYMFRKPGILLRTLSHRATSFRPNILETITPVTSMTSNTKIIPNPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK
Ga0211660_100269774	3300020373	Marine	LLGYWIKKAFLKLSVEELSTVSETFFNTLYTFRKPGILLRILSHSATSLRPKKLETITPVTSITINTKTIPDPGKLVFKLNNVSGMYLVGTNLFISSSENFMTITLRARGTQKRRPEIK
Ga0211660_102528811	3300020373	Marine	TLYTFLKPGILLRTFSHSATSFRPNILVTNTPVISMTISTKIIPDPGIVVSKLNIASGKYFCGTRLLISSKKNLITRTVKARGTQKRRPEIK
Ga0211656_100392311	3300020375	Marine	MFLKPGILLRTLSHRVTSFRPSILETITPVTSMTSKTKTIPDPGKSVFKLNKVSGRYFGGIILFKSSKKNLITMKVRTRGIQKRRPEIK
Ga0211646_100182771	3300020383	Marine	MFLKPGILLRTLSHRATSFRPSILETITPVTSMIRKTKTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK
Ga0211646_102835801	3300020383	Marine	NAFLKLSVEELNTVSETFFNTLYTFLKPGILWRILSHSSTSFRPNKLETITPVMSITINTNTIPDPGKSVFKLNNVCGRYFVGTSLFTNSRKNLMTTTLRARGTQKRRPEIK
Ga0211553_101381262	3300020415	Marine	LRTFSHRATNFRPNILVTNTPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0211536_102383572	3300020426	Marine	ETFFNTLYTFRKPGILLRTFSHSATSFRPNILVTITPVISMTISTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTVKARGTQKRRPEIK
Ga0211603_101552392	3300020427	Marine	SVEVLNTVSETFFNTLYTFLKPGILFRTFSHRATSFRPNILVTITPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0211521_101596991	3300020428	Marine	KPGILLSNFSHRATNLLPNILVTNIPVISIIKNSRIIPDPGIEVSKLNIASGRYSCGTRLLINSKKNLMTIIVRIKGIQKRSPEIR
Ga0211639_102496261	3300020435	Marine	NAFLKLSVEVLNTVSETFFNTLYTFLKPGILLRTLSHRATSFRPNILETNTPVISMTISTKIIPDPGIVVSKLNIASGKYFCGTRLLISSKKNLITRTVKARGTQKRRPEIK
Ga0211639_102723941	3300020435	Marine	NAFLKLSVEELNTVSETFFNTLYTFRKPGILWRILSHRATSFRPIKLETITPVMSITANTNIIPDPGKSVFKLNNVSGRYFVGTSLFINSRKNLMTTTLRARGTQKRRPEIK
Ga0206684_11268732	3300021068	Seawater	TFSHRATSFRPNILVTNTPVISITINTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0206683_103849192	3300021087	Seawater	ILLRTFSHRATNFRPNILVTNTPVISITSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0206683_104622631	3300021087	Seawater	LKLSVEVLNTVSETFFNTLYTFRKPGILLRTFSHSATSFRPNILVTITPVISMTISTKIIPDPGIVVSKLNIASGKYFCGIRLLISSKKNLITRTVKARGTQKRRPEIK
Ga0206679_103088872	3300021089	Seawater	TFFNTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0206691_12862432	3300021342	Seawater	LNTVSETFFNTLYMFRKPGILLRTFSHRATNFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0206685_101162721	3300021442	Seawater	IKNAFLKLSVEVLNTVSETFFNTLYTFRKPGILLRTFSHSATSFRPNILVTITPVISMTISTKIIPDPGIVVSKLNIASGKYFCGIRLLISSKKNLITRTVKARGTQKRRPEIK
Ga0226832_102116202	3300021791	Hydrothermal Vent Fluids	LYTFLKPGILLRTLSHRATSFRPNILETNTPVISMTISTKIIPDPGILVSKLNITSGKYFCGTRLLITSKENLITMTVKARGTQKRRPEIK
Ga0187827_101860433	3300022227	Seawater	FLKLSVEELNTVSETFFNTLYTFRKPGILLRIFSHSSTSLRPKKLETITPVMSIIINTKTIPDPGKSVFKLNNVSGRYLVGINLFINSSENFMTITLRARGTQKRRPEIK
Ga0208467_10121823	3300025265	Deep Ocean	SETFFNTLYTFLKPGILWRILSHSSTSFRPNKLETITPVMSITINTNTIPDPGKSVFKLNNVCGRYFVGTSLFTNSRKNLMTTTLRARGTQKSRPEIK
Ga0209290_10640641	3300025397	Methane Seep Mesocosm	LNTVSETFFNTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK
Ga0208833_10208261	3300025863	Deep Ocean	TFRKPGILLRTFSHRATTFRPNILVTITPVMSMINSTKIIPEPGIVVSKLNIDSGRYFCGIKLSISSKKNLITMTLKDRGIQKRRPEIK
Ga0208750_10272421	3300026082	Marine	NAFLKLSVEVLNTVSETFFNTLYTFRKPGILLRTFSHSATSFRPNILVTITPVISMTISTKIIPDPGIVVSKLNIASGKYFCGTRLLISSKKNLTTKTVKARGTQKRRPEIK
Ga0208750_10383762	3300026082	Marine	NAFLKLSVEVLNTVSETFFNTLYTFRKPGILLRAFSHRATNFRPNMLVTNTPVISMISNTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0208640_10307443	3300026208	Marine	YWIKNAFLKLSVEELNTVSETFFNTLYTFRKPGILLRILSHRVTSFRPKKLETITPVMSITNNTKTIPDPGKSVFKLNNVSGRYLVGTSSLINSRENLMTITLRARGIQKRRPEIK
Ga0207989_10576341	3300026209	Marine	KAFLKLSVEELSTVSETFFNTLYTFRKPGILLRILSHSATSLRPKKLETITPVTSITINTKTIPDPGKLVFKLNNVSGMYLVGTNLFISSSENFMTITLRARGTQKRRPEIK
Ga0208131_10297721	3300026213	Marine	KLSVEVLNTVSETFFNTLYMFLKPGILLRTFSHRATNFRPNILVTNTPVISMTSNTKIIPEPGIVVSNLKITSGRYFCGTRLLISSKKNLITMTLKARGIQKRRPEIK
Ga0208639_10384213	3300026256	Marine	NTLYIFLKPGILLRTLSHRVTSFRPSILETITPVTSMISKTKTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK
Ga0208896_10948771	3300026259	Marine	VSETFFNTLYMFLKPGILLRTLSHRATSFRPSILETITPVTSMISKTKTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK
Ga0208408_11119351	3300026260	Marine	LYIFLKPGILLRTLSHRVTSFRPSILETITPVTSMTSKTKTIPDPGKSVFKLNKVSGRYFVGIILFKSSKKNLITMKVRTRGIQKRRPEIK
Ga0208524_10276661	3300026261	Marine	IPLLGYWIKNAFLKLSVEELNTVSETFFNTLYTFRKPGILWRILSHRATSFRPIKLETITPVMSITANTNIIPDPGKSVFKLNNVSGRYFVGTSLFINSRKNLMTTTLRARGTQKRRPEI
Ga0209753_10834011	3300027622	Marine	RTLSHRATSFRPNMLVTITPVMNMTISTKIIPEPGIAVSKLNRASGRYFCGIRLLISSKKNLITMTVKARGIQKRRPEIK
Ga0209019_11243281	3300027677	Marine	NAFLKLSVEVLNTVSETFFNTLYTFRKPGILLRTFSHSATSFRPNILVTITPVISMTISTKIIPDPGIVVSKLNIASGKYFCGTRLLISSKKNLITMTVKDRGTQKRRPEIK
Ga0257107_11146882	3300028192	Marine	SETFFNTLYMFRKPGILLRTFSHRDTNFRPNILVTITPVISMTSNTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0257109_10225503	3300028487	Marine	MFRKPGILLRTFSHRATNFRPNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK
Ga0257111_10432531	3300028535	Marine	IKNAFLKLSVEVLNTVSETFFNTLYMFRKPGILLRAFSHRATNFRPKILVTITPVISMTSNTKIIPEPGIVVSNLKITSGRYLCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0315328_101224441	3300031757	Seawater	FNTLYTFRKPGILLRTFSHRATNFRPNMLVTNTPVISMISNTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0315328_106442872	3300031757	Seawater	MFRKPGILLRTFSHRATNFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYLCGTRLLTSSKKNLITMTLKAKGIQKRRPEIK
Ga0315326_109451981	3300031775	Seawater	LFGYWIKNAFLKLSVEVLNTVSETFFNTLYTFRKPGILLRAFSHRATNFRPNMLVTNTPVISMISNTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0310125_102235212	3300031811	Marine	NTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK
Ga0315319_100406921	3300031861	Seawater	FLKLSVEVLNTVSETFFNTLYTFRKPGILLRAFSHRATNFRPNMLVTNTPVISMISNTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0315319_101395981	3300031861	Seawater	SETFFNTLYMFRKPGILLRTFSHRATSFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0315318_103429742	3300031886	Seawater	VEVLNTVSETFFNTLYTFLKPGILFRTFSHRATSFRPNILVTNTPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0315316_103670552	3300032011	Seawater	LRTFSHRATNFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0315324_100489013	3300032019	Seawater	VLNTVSETFFNTLYMFRKPGILLRTFSHRATNFRPNILVTNTPVISMTSITKIIPEPGIVVSNLNIVSGRYFCGIRLLTSSKKNLMTMTLRARGIQKRRPEIK
Ga0315315_102263172	3300032073	Seawater	GILLRSFSHKATNLRPKILVTNTPVMSIIINNKIIPDPGIAVSKLKIASGRYSCGTRLLINSKKNLITTIVKIKGIQKRSPEIR
Ga0315333_103025081	3300032130	Seawater	IKNAFLKLSVEVLNTVSETFFNTLYMFRKPGILLRTFSHRATNFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0310345_118034201	3300032278	Seawater	VEVLNTVSETFFNTLYTFLKPGILFRTFSHRATSFRPNILVTITPVISMTINTKIIPEPGIVVSNLNIASGKYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK
Ga0315334_103533222	3300032360	Seawater	FFNTLYMFRKPGILLRTFSQSATSFRPNILVTITPVISMTNSTKIIPEPGIVVSKLNRASGRYFCGTRLLISSKKNLITITLKTRGIQKRRPEIK
Ga0315334_107731472	3300032360	Seawater	FKTLYMFRKPGILLRTFSHRATNFRPNMLVTNTPVISMTSNTKIMPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKDRGIQKRRPEIK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095618

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences