NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095726

Metagenome Family F095726

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095726
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 55 residues
Representative Sequence MSALGQKQTYAVQQAMSALPPIATAKADSRKRSCPLYPQKRTCAVQLGMSALG
Number of Associated Samples 82
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.69 %
% of genes near scaffold ends (potentially truncated) 70.48 %
% of genes from short scaffolds (< 2000 bps) 69.52 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.143 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil
(13.333 % of family members)
Environment Ontology (ENVO) Unclassified
(28.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.619 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF04392ABC_sub_bind 41.90
PF13185GAF_2 3.81
PF06568DUF1127 2.86
PF00034Cytochrom_C 1.90
PF00127Copper-bind 1.90
PF03480DctP 1.90
PF00211Guanylate_cyc 1.90
PF00072Response_reg 0.95
PF00581Rhodanese 0.95
PF03083MtN3_slv 0.95
PF12680SnoaL_2 0.95
PF03779SPW 0.95
PF01243Putative_PNPOx 0.95
PF00839Cys_rich_FGFR 0.95
PF13545HTH_Crp_2 0.95
PF00194Carb_anhydrase 0.95
PF03150CCP_MauG 0.95
PF00248Aldo_ket_red 0.95
PF06146PsiE 0.95
PF01272GreA_GreB 0.95
PF10011DUF2254 0.95
PF12840HTH_20 0.95
PF08241Methyltransf_11 0.95
PF12697Abhydrolase_6 0.95
PF00857Isochorismatase 0.95
PF03928HbpS-like 0.95
PF09948DUF2182 0.95
PF13924Lipocalin_5 0.95
PF03466LysR_substrate 0.95
PF03734YkuD 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 41.90
COG5457Uncharacterized conserved protein YjiS, DUF1127 familyFunction unknown [S] 2.86
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 1.90
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 0.95
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 0.95
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.95
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.95
COG1858Cytochrome c peroxidasePosttranslational modification, protein turnover, chaperones [O] 0.95
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.95
COG3223Phosphate starvation-inducible membrane PsiE (function unknown)General function prediction only [R] 0.95
COG3338Carbonic anhydraseInorganic ion transport and metabolism [P] 0.95
COG4095Sugar transporter, SemiSWEET family, contains PQ motifCarbohydrate transport and metabolism [G] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.14 %
UnclassifiedrootN/A22.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig1306977Not Available657Open in IMG/M
3300000043|ARcpr5yngRDRAFT_c001165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2960Open in IMG/M
3300000043|ARcpr5yngRDRAFT_c018487All Organisms → cellular organisms → Bacteria → Proteobacteria587Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1042687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria701Open in IMG/M
3300001139|JGI10220J13317_10132739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3134Open in IMG/M
3300004114|Ga0062593_100202019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1584Open in IMG/M
3300004479|Ga0062595_101581980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria610Open in IMG/M
3300004480|Ga0062592_100711685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria875Open in IMG/M
3300005289|Ga0065704_10346406All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium811Open in IMG/M
3300005332|Ga0066388_100314462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2212Open in IMG/M
3300005332|Ga0066388_101688977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1120Open in IMG/M
3300005332|Ga0066388_102339412All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300005332|Ga0066388_102350697All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300005332|Ga0066388_102350700All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria966Open in IMG/M
3300005332|Ga0066388_104454943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428713Open in IMG/M
3300005332|Ga0066388_106405812All Organisms → cellular organisms → Bacteria → Proteobacteria594Open in IMG/M
3300005354|Ga0070675_101167366Not Available709Open in IMG/M
3300005364|Ga0070673_100401031All Organisms → cellular organisms → Bacteria → Proteobacteria1226Open in IMG/M
3300005436|Ga0070713_102062964All Organisms → cellular organisms → Bacteria → Proteobacteria553Open in IMG/M
3300005455|Ga0070663_100276824All Organisms → cellular organisms → Bacteria1336Open in IMG/M
3300005455|Ga0070663_100904226Not Available763Open in IMG/M
3300005456|Ga0070678_100726016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium897Open in IMG/M
3300005546|Ga0070696_100277139All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300005564|Ga0070664_100360230All Organisms → cellular organisms → Bacteria → Proteobacteria1324Open in IMG/M
3300005614|Ga0068856_100741078All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1002Open in IMG/M
3300005615|Ga0070702_100103580Not Available1750Open in IMG/M
3300005617|Ga0068859_101253280Not Available817Open in IMG/M
3300005713|Ga0066905_100052286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2510Open in IMG/M
3300005713|Ga0066905_100238964All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1387Open in IMG/M
3300005713|Ga0066905_101368314All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005764|Ga0066903_100302576All Organisms → cellular organisms → Bacteria → Proteobacteria2532Open in IMG/M
3300005764|Ga0066903_100346864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2396Open in IMG/M
3300005764|Ga0066903_100452274Not Available2147Open in IMG/M
3300005764|Ga0066903_103554545Not Available840Open in IMG/M
3300005937|Ga0081455_10235694All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1348Open in IMG/M
3300006050|Ga0075028_100086588All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300006057|Ga0075026_100729596Not Available594Open in IMG/M
3300006196|Ga0075422_10001602All Organisms → cellular organisms → Bacteria → Proteobacteria6531Open in IMG/M
3300006844|Ga0075428_100287044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1770Open in IMG/M
3300006847|Ga0075431_100180235All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2168Open in IMG/M
3300006852|Ga0075433_10380676Not Available1246Open in IMG/M
3300006854|Ga0075425_100066149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4062Open in IMG/M
3300006854|Ga0075425_100561410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1314Open in IMG/M
3300009094|Ga0111539_10162309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2613Open in IMG/M
3300009094|Ga0111539_10254207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2046Open in IMG/M
3300009098|Ga0105245_10323818Not Available1519Open in IMG/M
3300009100|Ga0075418_10072861All Organisms → cellular organisms → Bacteria → Proteobacteria3658Open in IMG/M
3300009147|Ga0114129_10080356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4532Open in IMG/M
3300009148|Ga0105243_10699224All Organisms → cellular organisms → Bacteria → Proteobacteria988Open in IMG/M
3300009156|Ga0111538_10178202All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2698Open in IMG/M
3300009553|Ga0105249_10105794All Organisms → cellular organisms → Bacteria → Proteobacteria2653Open in IMG/M
3300010043|Ga0126380_10108656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1684Open in IMG/M
3300010046|Ga0126384_10029847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3614Open in IMG/M
3300010046|Ga0126384_11351577Not Available662Open in IMG/M
3300010047|Ga0126382_10557961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium934Open in IMG/M
3300010048|Ga0126373_12143686Not Available620Open in IMG/M
3300010358|Ga0126370_11154369All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300010359|Ga0126376_10269540All Organisms → cellular organisms → Bacteria → Proteobacteria1461Open in IMG/M
3300010360|Ga0126372_10401148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri1251Open in IMG/M
3300010362|Ga0126377_10369037All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1437Open in IMG/M
3300010362|Ga0126377_11794152Not Available689Open in IMG/M
3300010366|Ga0126379_10081982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2798Open in IMG/M
3300010373|Ga0134128_11678667All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium699Open in IMG/M
3300010397|Ga0134124_12543830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales554Open in IMG/M
3300010398|Ga0126383_10694636Not Available1095Open in IMG/M
3300011119|Ga0105246_11485762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria636Open in IMG/M
3300012903|Ga0157289_10357685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium535Open in IMG/M
3300012913|Ga0157298_10001281All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3167Open in IMG/M
3300012971|Ga0126369_10534622All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1235Open in IMG/M
3300012971|Ga0126369_11505424Not Available763Open in IMG/M
3300012987|Ga0164307_11798367Not Available519Open in IMG/M
3300013096|Ga0157307_1055120Not Available754Open in IMG/M
3300013100|Ga0157373_11492966Not Available516Open in IMG/M
3300013306|Ga0163162_10498869All Organisms → cellular organisms → Bacteria → Proteobacteria1348Open in IMG/M
3300013306|Ga0163162_13104318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas rhenobacensis533Open in IMG/M
3300013308|Ga0157375_10057793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3836Open in IMG/M
3300015371|Ga0132258_10213971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4684Open in IMG/M
3300015371|Ga0132258_11042921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2067Open in IMG/M
3300015371|Ga0132258_12069056All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300015373|Ga0132257_101067960Not Available1018Open in IMG/M
3300016270|Ga0182036_10008153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae5433Open in IMG/M
3300018029|Ga0187787_10232569Not Available665Open in IMG/M
3300018032|Ga0187788_10059359Not Available1316Open in IMG/M
3300019361|Ga0173482_10010421All Organisms → cellular organisms → Bacteria → Proteobacteria2381Open in IMG/M
3300019361|Ga0173482_10106734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1026Open in IMG/M
3300024055|Ga0247794_10048825All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300025900|Ga0207710_10175431All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1049Open in IMG/M
3300025923|Ga0207681_10190412All Organisms → cellular organisms → Bacteria1569Open in IMG/M
3300025930|Ga0207701_10154277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2034Open in IMG/M
3300025933|Ga0207706_10121000All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2301Open in IMG/M
3300025941|Ga0207711_10390705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium symbiodeficiens1292Open in IMG/M
3300025949|Ga0207667_11680835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium602Open in IMG/M
3300025960|Ga0207651_10022166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3877Open in IMG/M
3300025972|Ga0207668_11136746All Organisms → cellular organisms → Bacteria → Proteobacteria701Open in IMG/M
3300026075|Ga0207708_10199048All Organisms → cellular organisms → Bacteria → Proteobacteria1598Open in IMG/M
3300027909|Ga0209382_10150427All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2697Open in IMG/M
3300028381|Ga0268264_11609422Not Available660Open in IMG/M
3300031799|Ga0318565_10204616All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium960Open in IMG/M
3300031820|Ga0307473_10297600All Organisms → cellular organisms → Bacteria → Proteobacteria1014Open in IMG/M
3300031912|Ga0306921_12125008All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300031940|Ga0310901_10183116Not Available824Open in IMG/M
3300031941|Ga0310912_10082845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2332Open in IMG/M
3300032783|Ga0335079_10002255All Organisms → cellular organisms → Bacteria → Proteobacteria22251Open in IMG/M
3300033412|Ga0310810_10163277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2571Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.33%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil13.33%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.86%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.90%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.95%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000043Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphereHost-AssociatedOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300001139Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_161570002124908045SoilMSALGQKQTYALQQAMSALPPIATAKADFRKRSCPLYPQKRTCAVQLAMSAEGKKACYRC
ARcpr5yngRDRAFT_00116543300000043Arabidopsis RhizosphereMSALGQKRTYAPQQAMSALHPIATTKADVPRKSCPLYSQKQTCAVQEAMSAKGQ*
ARcpr5yngRDRAFT_01848713300000043Arabidopsis RhizosphereMSALGHKQTFALQKAMSALPPKATAKADIRKRSCPLHPRKQTCAVHQAMSAMGQ
AF_2010_repII_A01DRAFT_104268723300000580Forest SoilALGLKQTYAAQNGMSALPPIATAKAKFREKPCPLYLRKRTCAVH*
JGI10220J13317_1013273913300001139SoilVPGQISTLEGSRLMSALGHKRTYAPQQAMSALHPIATTKADMRKRSCPLYPRKRTCAVQTVMSALGQ*
Ga0062593_10020201933300004114SoilTYAVQNGMSALPLIATTKADFGKPSCPLYLRKRTCAAQNEMSAKGQ*
Ga0062595_10158198013300004479SoilMSALGQKQTFALQRAMSALPLVATAKADMRKSSCPLCPRKRTDAVQNEMSA
Ga0062592_10071168523300004480SoilMSALGQKQTYPVQNGMSALPPIATAKADFGNLSCLLYPRKRTCAVH
Ga0065704_1034640613300005289Switchgrass RhizosphereLKGVADQPMSALGQKQTYAVQKAMSALPPIAIAKANFRTTSCPLYPRKRTCAVQLGMSALGQ*
Ga0066388_10031446213300005332Tropical Forest SoilMSALGQKQTFATQKGMSALPPIATAKADIRKRLCLLYPRKRTCAVQLAM
Ga0066388_10168897713300005332Tropical Forest SoilMSALGQKQTYALQQPMSALHPIATAKADMTIAACLLYPRKRTCAVQLGMSALGQKRT
Ga0066388_10233941223300005332Tropical Forest SoilMSALGQKQTYAVHKAMSALPPIATAKADIRKWSCLLYPRKQTCAVQRLMSALGQ*
Ga0066388_10235069723300005332Tropical Forest SoilMSALGHKRTYAAQKAMSALPPIATAKADIRKRSCPLYPRKRTYAVHKLMSALG
Ga0066388_10235070023300005332Tropical Forest SoilMSALGQKRTYAAQNGMSALPPKATAKADIRKRSCPLYTQKQTCAAQYRMSAKGQ*
Ga0066388_10445494313300005332Tropical Forest SoilMPKGAGVRLPMSALGHKQAYASQQVMSALPPIATAKADIGKPLCLLYPRKRTCAL
Ga0066388_10640581213300005332Tropical Forest SoilMSALGQKQTYAVQNVMSALSPIATAKADIRKWSRPLYPRKQTCAAQTGMSAMGQKRT
Ga0070675_10088404613300005354Miscanthus RhizosphereMAMSAVGQKQTYAVQKGMSALPPIATAKADNPRERTCAVQ
Ga0070675_10116736613300005354Miscanthus RhizosphereMSALGQRQTRAVQDRMSALHPIATAKAHSRKRSSPLNPRKRTCAVQLRMSAEGQKRTHGRQQINAR
Ga0070673_10040103123300005364Switchgrass RhizosphereMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCAAQ
Ga0070713_10206296423300005436Corn, Switchgrass And Miscanthus RhizosphereMSALGQKQTYAAQQVMSALLPIATGKADTCASSCPLHPQKRTCAVQLGMSALGQK
Ga0070663_10027682423300005455Corn RhizosphereMSALGHKPTYVVQKSMSALPPIATAKADIGKTPCPLYPQKRTCAAQTVMSALGQKRT
Ga0070663_10090422623300005455Corn RhizosphereMSAMGQKPTCAAQTGMSAFHPKATVKADIRNGSCLLYP*KRTCAVQLAMSAKGQKRT
Ga0070678_10072601613300005456Miscanthus RhizosphereMSALGQKRTYAAHKSMSALPPIATAKADIGKLSCLLYPRKRTCAA
Ga0070696_10027713913300005546Corn, Switchgrass And Miscanthus RhizosphereHKRTYAPQQAMSALHPIAVTKADARESHVCFTPKADMAVQEAMSAKGQ*
Ga0070664_10036023013300005564Corn RhizosphereMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCAAQQ
Ga0068856_10074107813300005614Corn RhizosphereMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCA
Ga0070702_10010358043300005615Corn, Switchgrass And Miscanthus RhizosphereMSALGQKQTYAAQQVMSALSPIATAKADTRKWSCLLYPRKRTYALQTVMSALGQKPTSGQLSA
Ga0068859_10125328033300005617Switchgrass RhizosphereMSALGQQRTYALQKAMSALPPKATAKADIRKTSCLLYLRKRTCAVQ
Ga0066905_10005228643300005713Tropical Forest SoilMSALGQKQTYALQNVMSALPLTATAKADIGNLSCPLYPQKQTCAAQLGMSAKGQ*
Ga0066905_10023896413300005713Tropical Forest SoilSDDDNPQVRSMSALGEKQTYAVQRLMSALPPIATAKADFRNWACPLYPQKRTCAVHQPMSALGQ*
Ga0066905_10136831423300005713Tropical Forest SoilMSALGQKQTYAVQKPMSALPPIATAKADSRNPPCLLYPQEQTCAVQDTMSAKGQ*
Ga0066903_10030257633300005764Tropical Forest SoilMSALGQKQTYAVQYVMSALPPIATAKADSRKQACPLYPQKRTCAVQLVMSALAISGH*
Ga0066903_10034686423300005764Tropical Forest SoilMCFIPKAAFLAMSALGHKQTYAVQQPMSALPPIATTKADFRKTSCLLYPQKRTYAVQTRMSAKGQ*
Ga0066903_10045227413300005764Tropical Forest SoilMYALGHKRTCALHHVMSALPPIATAKADSRKRSCLLYPQKQTCAVQEPMSANGQKQTSEI
Ga0066903_10355454513300005764Tropical Forest SoilMSALGQKRTYALQKAMSALTPIATVKADIGNRSCLLYPQKRTCAVQLGMSA
Ga0081455_1023569413300005937Tabebuia Heterophylla RhizosphereFAALMSALGQKQTYAAHKLMSALPPIATVEADIGNRSCLLYPQKRTCAVQTVMSAKGQADIG*
Ga0075028_10008658813300006050WatershedsGQKPTYAPHNGMSALPPIATIKADMRKWSCLLYPRKRTCAVHEPMSALGQ*
Ga0075026_10072959623300006057WatershedsMSALGQKATYAPHKRMSALPSIATAIADSRSSRCLLYPQKRTCAAQPAMSAKG
Ga0075422_1000160283300006196Populus RhizosphereMSALGHKRTYAVQQPMSALPPKATAKADSRNRPCPLYPQERTCAVQL
Ga0075428_10028704413300006844Populus RhizosphereMSALGQKQTYAVQQAMSALPPIATAKADSRKRSCPLYPQKRTCAVQLGMSALG
Ga0075431_10018023513300006847Populus RhizosphereKQTYALQQAMSALHPIATAKAKFRKKSCLLYPRKRTCAVQLRMSALGQ*
Ga0075433_1038067613300006852Populus RhizosphereFTPESGRVQRKHQCPLGQKQTYAAQKGMSALLLIATAKADSRNRSCPLYPQKRTCAAQPVMSALGQ*
Ga0075425_10006614943300006854Populus RhizosphereMSALGQKQTYAAQQVMSALPPIATAKADSRKRSCPLYPRKRTCAVQIQMSALGQ*
Ga0075425_10056141023300006854Populus RhizosphereMSAKGQKQTYAAQKGMSALLLIATAKADSRNRSCPLYPQKRTCAAQPVMSALGQ*
Ga0111539_1016230923300009094Populus RhizosphereMSALGQKQTYALQQAMSALHPIATAKAKFRKKSCLLYPRKRTCAVQLRMSALGQ*
Ga0111539_1025420723300009094Populus RhizosphereMSALGQKPTCAAQKGAQKGMSALHPKATVKADIRNRACLLYPRKRTCAAQNPMSALGQ*
Ga0105245_1032381833300009098Miscanthus RhizosphereMAMSALGQKQTYAVQKGMSALPPIATAKADNPRERTCAVQDALRWLK
Ga0075418_1007286123300009100Populus RhizosphereMSALGHKRTYAPQQAMSALPPIATAKADICPGACLLCTRKRTRAAQLGMSAKGQ*
Ga0114129_1008035623300009147Populus RhizosphereMSALGQKQTYAPQKAMSALPPIATPKADFRKRRCLLYPRKRTCAAQLGMSAKGHKRTSNKEDLL*
Ga0105243_1069922413300009148Miscanthus RhizosphereVQQAMSAKGQKQTFALQQVMSALPPIATAKADSREKPCPLSLTKRPCAVQSEMSAKGQK
Ga0111538_1017820233300009156Populus RhizosphereMSALGQKPTCAAQKGAQKGMSALHPKATVKADIRNRACLLYPRKRTCAVHWLMSAIGQ*
Ga0105249_1010579433300009553Switchgrass RhizosphereMTMSALGQKQTCAPHKLMSALPPIATVKADIRNGSCLLYPRKRTCAVQLEMSAKGQ*
Ga0126380_1010865613300010043Tropical Forest SoilMSALGQCALQKAMSALPPIATAKADIRKRSCPLYPRKRTCAVQPGMSAL
Ga0126384_1002984753300010046Tropical Forest SoilMSALGQKQTCAMQKAMSALPPIATTKADMCQWSCLLCLRKRTCAVQEAMSAKGQKRT
Ga0126384_1135157723300010046Tropical Forest SoilVHYGEMSPLMSALGHKQTCASQKEMSALPPKATAKADFRKRSCLLYPRKRTCA
Ga0126382_1055796123300010047Tropical Forest SoilMSALGQKQTCAVQTSMSASAPIATMKADFRKRSCLLYPQKRTFRAVTELSAKGQRRKFRKSVTYC
Ga0126373_1214368613300010048Tropical Forest SoilMSALGQKQTYAAQNDMSALPPIATAKADFPQKSCLLYPQERTCAVHYLMSAKGQK
Ga0126370_1115436913300010358Tropical Forest SoilMSASGQKQTYAAQQAMSALPPIATAKADIGKRSCPLDPQKRTCALQYPMSALGQ
Ga0126376_1026954013300010359Tropical Forest SoilMSALGQKQTFALQNVMSALHPIATAKADSRNRSCPPYPRKRTCAVQLQMSVKGQKRTR
Ga0126372_1040114823300010360Tropical Forest SoilMMSALGQKQTYALQKAMSALPPIATAKADIRKRSCLLYPQKRTCAVQELMSALGQKRTLTVEYA*
Ga0126377_1036903713300010362Tropical Forest SoilMALNWPQTWIMPMSALGQKQTCAVQLAMSAFPPIATVKADIRKRSCLLYPRKRTCAV
Ga0126377_1179415223300010362Tropical Forest SoilRSFNASSNGLSMSALGQKQTFATQNVMSALPPIATAKADFRNRPCLLYPQERTCAVQLAMSAKGQ*
Ga0126379_1008198213300010366Tropical Forest SoilSSLGSRKSLPNVIMSALGQKQTCAVQKGMSALPPKATAKADSRKRSCPLYPQKRTCAVQERVSALGQ*
Ga0134128_1167866713300010373Terrestrial SoilMSALGQKRTFAVHQPMSALHPIATTKADMGQWQCPLYPQKRTCAVQETMSAKGQKRTL
Ga0134124_1254383033300010397Terrestrial SoilMSALGQKQTYAAQNVMSALPPIATTKADIRKRACLLYIRKRTCAVQS
Ga0126383_1069463633300010398Tropical Forest SoilMMSALGQKQTYALQKAMSALPPIATAKADIRKRSCLLYPQKRTCAVQTGMSAKGSAR*
Ga0105246_1148576223300011119Miscanthus RhizosphereMSALGQKQTYAVQQGMSALHPIATAKADIRKTPCLLYPRKRTCAAQQPMSAK
Ga0157289_1035768523300012903SoilMSALGQTYAVQNGMSALPLIATTKADFGKPSCPLYLRKRTCAAQNEMSA
Ga0157298_1000128123300012913SoilMSALGQKPTCALQNLMSALLSIATAKADSRKRPCPLHPRKRTRALQLAMSALGQ*
Ga0126369_1053462223300012971Tropical Forest SoilVCMPMSALGQKQTYAAHKLMSAFPPIATVKADSRKRLCLLYPQKRTCAVHYLMSAKGQKRTEAILRG*
Ga0126369_1150542413300012971Tropical Forest SoilMNKAGLAGAMSALGHKQTCAAQKGMSALPPIATAKADSGKRSCLLYPGKRTCAV
Ga0164307_1179836713300012987SoilMSALGQKRTYAPQQAMSALHPIATTKADVPRKSCPLYSQKQTCAVQEAMSAKG
Ga0157307_105512013300013096SoilMSALGQKQTYAAQQVMSALSPIATAKADTRKWSCLLYPRKRTYALQTVMSALGQ
Ga0157373_1149296623300013100Corn RhizosphereMSALGQKQTYAAQQVMSALSPIATAKADTRKWSCLLYPRKRTYALQTVMSALGQKPTSGQLSAASA
Ga0163162_1049886923300013306Switchgrass RhizosphereMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCAAQQPMSA
Ga0163162_1310431813300013306Switchgrass RhizosphereMSALGQKPTYELQQAMSALPPIATAKADMCLRSCLLYPRKRTCAVHHVMSALG
Ga0157375_1005779343300013308Miscanthus RhizosphereMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCAAQQPMS
Ga0132258_1021397123300015371Arabidopsis RhizosphereMSALGQKQTYAVQQVMSALPPIATEKADIRNRSCLLYPQKRTCAVQEAMSALGQ*
Ga0132258_1104292113300015371Arabidopsis RhizosphereMSALGQKQTYAVQQPMSALPPKATTKADMPQKSCLLYPRKRTCAVHRLMSAL
Ga0132258_1206905623300015371Arabidopsis RhizosphereMSALGHKQTYAVQKAMSALRPTATVKADICPGPCLLYSRKRTCAVQLGMSAKG
Ga0132257_10106796023300015373Arabidopsis RhizosphereVQGRADKDAMSALGHKQTYAVQKDMSALPPIATAKADIRKWSCLLYPQKRTCAAQQV
Ga0182036_1000815323300016270SoilMSALGQKRTYAVHKRMSALPPIATAKADSRKGACPLYPQKRTCAVQLGMSALGQ
Ga0187787_1023256923300018029Tropical PeatlandNPEGAMSALGQKQTFASQKAMSALLRIATAKADTRKGSCLLYPQKRTDAVQNEMSAMGHKQTFRGVIAMSALP
Ga0187788_1005935923300018032Tropical PeatlandMSALGQEATFAPQNLMSALPRIATVKADLRKKSCPLCSRKRTCAAQTVMSASGQ
Ga0173482_1001042143300019361SoilMSALGQKQTCAPQNAMSALPLIATAKADIRKRSCPLCLRKRTCAVQREMSAKGQ
Ga0173482_1010673423300019361SoilMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCAAQQPMSAKGQK
Ga0247794_1004882513300024055SoilMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCAAQQPMSAKG
Ga0207710_1017543123300025900Switchgrass RhizosphereMSALGQNRTFASQKAMSALLLIATTKADIRKPPRLVYPQKRTCAVQREMSAKGQ
Ga0207681_1019041223300025923Switchgrass RhizosphereMSALGQKQTYALQQAMSALLPIATAKADLRKKACLLYPQKRTCALHWPMSGKGQ
Ga0207701_1015427743300025930Corn, Switchgrass And Miscanthus RhizosphereMTMSALGQKQTCAPHKLMSALPPIATVKADIRNGSCLLYPRKRTCAVQLEMSAKGQ
Ga0207706_1012100013300025933Corn RhizosphereMSALGHKPTYAPQQAMSALPPIATMKADIRERSCLLSLRKRTCAVRQAMSALGQKRTLVSHRAARFPQMRS
Ga0207711_1039070513300025941Switchgrass RhizosphereMSALGQNRTFASQKAMSALLLIATTKADIRKPPCLVYPQKRTCAVQREMSAKGQKRKSA
Ga0207667_1168083523300025949Corn RhizosphereMSALGHKQTYAPQQAMSALPPKATAKADIRNRSCLLYPQKQTCAVQWPMSAMGQKRTFV
Ga0207651_1002216643300025960Switchgrass RhizosphereMSALGQKPTCALQNLMSALHPIATAKADIRKTPCLLYPRKRTCAAQQPMSAKGQ
Ga0207668_1113674623300025972Switchgrass RhizosphereMTMSALGQKQTCAPHKLMSALPPIATVKADIRNGSCLLYPRKRTCAVQLGMSATGQKR
Ga0207708_1019904833300026075Corn, Switchgrass And Miscanthus RhizosphereMSALGQKPTYELQQAMSALPPIATAKADMCLRSCLLYPRKRTCAVHHVMSALGQ
Ga0209382_1015042753300027909Populus RhizosphereMSALGQKQTYALQQAMSALHPIATAKAKFRKKSCLLYPRKRTCAVQLRMSALGQ
Ga0268264_1160942213300028381Switchgrass RhizosphereMSALGQKQTCAVHQPMSASPPIATAKADLRKQPCLLYSQKRTCAVQYLMSALGQKQTFAG
Ga0318565_1020461623300031799SoilMRRSKLRGSMSALGHKRTYALQKAMSALPPIATAKADSRKGSCLLYPRKRTCAVQEAMSAQGQKRTS
Ga0307473_1029760023300031820Hardwood Forest SoilMSALGQKQTCATQQAMSALPPIATAKADIRKRSTCAVQEAMSAMGQKRTSLTAS
Ga0306921_1212500813300031912SoilMSALGHKQTYAVRKPMSALPPIATTKADIGKLSCLLYPRKRTCAVQLAMSALGQ
Ga0310901_1018311623300031940SoilMSALGQKRTYAPQQAMSALHPIATTKADVPRKSCPLYSQKQTCAVQEAMSAKGQ
Ga0310912_1008284523300031941SoilMRRSKLRGSMSALGHKRTYALQKAMSALPPIATAKADSRKGSCLLYPRKRTCAVQEAMSAQGQKRTSRP
Ga0335079_10002255243300032783SoilMSALGQKSTYAVQKPMSALPPIATAKAYSRNRPCLLFTQKQTCAVQPRMSAKGQ
Ga0310810_1016327713300033412SoilMPPGSRCPMSALGHNPTYAVQKAVSAVPPIATAKADFRKRSCPHCPRKRTCAAQLAM

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.