Metagenome / Metatranscriptome Family F095734

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095734
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	72 residues
Representative Sequence	LDHSPLVDFDLQLFDADTGQLIVDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ
Number of Associated Samples	74
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.57 %
% of genes near scaffold ends (potentially truncated)	88.57 %
% of genes from short scaffolds (< 2000 bps)	92.38 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.905 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.905 % of family members)
Environment Ontology (ENVO)	Unclassified (24.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.381 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.37% Coil/Unstructured: 72.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00378	ECH_1	3.81
PF02776	TPP_enzyme_N	3.81
PF01925	TauE	2.86
PF02899	Phage_int_SAM_1	2.86
PF08007	JmjC_2	1.90
PF00589	Phage_integrase	1.90
PF02518	HATPase_c	1.90
PF00891	Methyltransf_2	0.95
PF00501	AMP-binding	0.95
PF13458	Peripla_BP_6	0.95
PF14076	DUF4258	0.95
PF02618	YceG	0.95
PF11013	DUF2851	0.95
PF13565	HTH_32	0.95
PF00270	DEAD	0.95
PF13518	HTH_28	0.95
PF00005	ABC_tran	0.95
PF07592	DDE_Tnp_ISAZ013	0.95
PF13551	HTH_29	0.95
PF00239	Resolvase	0.95
PF13613	HTH_Tnp_4	0.95
PF01348	Intron_maturas2	0.95
PF12697	Abhydrolase_6	0.95
PF01327	Pep_deformylase	0.95
PF00376	MerR	0.95
PF05685	Uma2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	2.86
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	2.86
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	2.86
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	1.90
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.95
COG1559	Endolytic transglycosylase MltG, terminates peptidoglycan polymerization	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.95
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.95
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
All Organisms	root	All Organisms	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
cellular organisms	root	All Organisms → cellular organisms	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	8.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.90 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	7.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.86 %
Oligoflexia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia	1.90 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.95 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.95 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	7.62 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2.86 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.90 %
Bdellovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales	1.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.95 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.95 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.95 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.95 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	4.76 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	2.86 %
unclassified Bdellovibrionales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales	1.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.95 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.95 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.95 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.95 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	4.76 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.86 %
Bdellovibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	1.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.95 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.95 %
Candidatus Rokubacteria bacterium RBG_16_73_20	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_20	0.95 %
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	0.95 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.95 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	4.76 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.86 %
Bdellovibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	1.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.90 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.95 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.95 %
Candidatus Rokubacteria bacterium RBG_16_73_20	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_20	0.95 %
Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	0.95 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.95 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.95 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12869464	Not Available	521	Open in IMG/M
3300000955\|JGI1027J12803_102288820	Not Available	546	Open in IMG/M
3300004463\|Ga0063356_104704288	Not Available	587	Open in IMG/M
3300004633\|Ga0066395_10293583	Not Available	887	Open in IMG/M
3300004633\|Ga0066395_10904098	Not Available	534	Open in IMG/M
3300005180\|Ga0066685_10323690	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300005295\|Ga0065707_10446959	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005445\|Ga0070708_100051225	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3657	Open in IMG/M
3300005468\|Ga0070707_100485374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1197	Open in IMG/M
3300005764\|Ga0066903_101842736	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005764\|Ga0066903_105317161	Not Available	680	Open in IMG/M
3300006194\|Ga0075427_10017287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	1124	Open in IMG/M
3300006845\|Ga0075421_100173732	Not Available	2682	Open in IMG/M
3300006845\|Ga0075421_101589032	Not Available	712	Open in IMG/M
3300006846\|Ga0075430_100052792	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300006847\|Ga0075431_100968502	Not Available	818	Open in IMG/M
3300006852\|Ga0075433_10264961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Bdellovibrionales → unclassified Bdellovibrionales → Bdellovibrionales bacterium	1523	Open in IMG/M
3300006852\|Ga0075433_11148963	Not Available	675	Open in IMG/M
3300006852\|Ga0075433_11820222	Not Available	523	Open in IMG/M
3300006853\|Ga0075420_100288713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1423	Open in IMG/M
3300006853\|Ga0075420_100664218	Not Available	899	Open in IMG/M
3300006853\|Ga0075420_100876046	Not Available	773	Open in IMG/M
3300006853\|Ga0075420_101208314	Not Available	650	Open in IMG/M
3300006853\|Ga0075420_101847405	Not Available	517	Open in IMG/M
3300006865\|Ga0073934_10384918	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	867	Open in IMG/M
3300006904\|Ga0075424_100379130	Not Available	1507	Open in IMG/M
3300006904\|Ga0075424_101305193	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	772	Open in IMG/M
3300007258\|Ga0099793_10697292	Not Available	512	Open in IMG/M
3300007790\|Ga0105679_10706186	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1504	Open in IMG/M
3300009088\|Ga0099830_10248615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1406	Open in IMG/M
3300009088\|Ga0099830_11044762	Not Available	677	Open in IMG/M
3300009088\|Ga0099830_11795946	Not Available	512	Open in IMG/M
3300009090\|Ga0099827_10474319	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300009090\|Ga0099827_11615872	Not Available	565	Open in IMG/M
3300009090\|Ga0099827_11668012	Not Available	555	Open in IMG/M
3300009094\|Ga0111539_10931172	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300009100\|Ga0075418_10221576	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2013	Open in IMG/M
3300009100\|Ga0075418_10538605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_53_8	1254	Open in IMG/M
3300009100\|Ga0075418_11563791	Not Available	716	Open in IMG/M
3300009162\|Ga0075423_11812217	Not Available	658	Open in IMG/M
3300009444\|Ga0114945_10257876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1020	Open in IMG/M
3300009553\|Ga0105249_13027993	Not Available	540	Open in IMG/M
3300009691\|Ga0114944_1007006	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	3624	Open in IMG/M
3300009792\|Ga0126374_10733975	Not Available	747	Open in IMG/M
3300009815\|Ga0105070_1050880	Not Available	768	Open in IMG/M
3300009821\|Ga0105064_1131684	Not Available	529	Open in IMG/M
3300010043\|Ga0126380_10155708	Not Available	1471	Open in IMG/M
3300010046\|Ga0126384_11469236	Not Available	638	Open in IMG/M
3300010046\|Ga0126384_12050299	Not Available	548	Open in IMG/M
3300010046\|Ga0126384_12451001	Not Available	506	Open in IMG/M
3300010047\|Ga0126382_10100122	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	1870	Open in IMG/M
3300010047\|Ga0126382_10210702	Not Available	1391	Open in IMG/M
3300010047\|Ga0126382_10895238	Not Available	767	Open in IMG/M
3300010358\|Ga0126370_10241815	Not Available	1394	Open in IMG/M
3300010360\|Ga0126372_11395473	Not Available	733	Open in IMG/M
3300010360\|Ga0126372_12955704	Not Available	527	Open in IMG/M
3300010362\|Ga0126377_11439526	Not Available	762	Open in IMG/M
3300010362\|Ga0126377_12549632	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010366\|Ga0126379_10466748	Not Available	1327	Open in IMG/M
3300010398\|Ga0126383_11914961	Not Available	681	Open in IMG/M
3300010398\|Ga0126383_13373320	Not Available	522	Open in IMG/M
3300010399\|Ga0134127_13454637	Not Available	517	Open in IMG/M
3300011270\|Ga0137391_10954491	Not Available	699	Open in IMG/M
3300011271\|Ga0137393_11037530	Not Available	698	Open in IMG/M
3300012096\|Ga0137389_10536612	Not Available	1004	Open in IMG/M
3300012201\|Ga0137365_10460633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	936	Open in IMG/M
3300012206\|Ga0137380_10382319	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	1252	Open in IMG/M
3300012212\|Ga0150985_119650906	Not Available	526	Open in IMG/M
3300012360\|Ga0137375_10022838	All Organisms → cellular organisms → Bacteria → Proteobacteria	7235	Open in IMG/M
3300012360\|Ga0137375_10650560	Not Available	869	Open in IMG/M
3300012362\|Ga0137361_11466128	Not Available	605	Open in IMG/M
3300012362\|Ga0137361_11615780	Not Available	569	Open in IMG/M
3300012362\|Ga0137361_11625830	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012396\|Ga0134057_1246365	Not Available	534	Open in IMG/M
3300012515\|Ga0157338_1070761	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	544	Open in IMG/M
3300012532\|Ga0137373_10179039	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RBG_16_73_20	1764	Open in IMG/M
3300012917\|Ga0137395_10156106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1565	Open in IMG/M
3300012925\|Ga0137419_11607645	Not Available	553	Open in IMG/M
3300012948\|Ga0126375_10424323	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	969	Open in IMG/M
3300012948\|Ga0126375_11530804	Not Available	571	Open in IMG/M
3300012971\|Ga0126369_10750351	Not Available	1056	Open in IMG/M
3300012971\|Ga0126369_11913907	Not Available	681	Open in IMG/M
3300012971\|Ga0126369_12505319	Not Available	601	Open in IMG/M
3300012971\|Ga0126369_12931662	Not Available	559	Open in IMG/M
3300013306\|Ga0163162_10760740	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1088	Open in IMG/M
3300015372\|Ga0132256_100617648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1199	Open in IMG/M
3300016341\|Ga0182035_10826247	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300016422\|Ga0182039_10139913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1858	Open in IMG/M
3300022195\|Ga0222625_1145658	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300025149\|Ga0209827_10050253	Not Available	768	Open in IMG/M
3300025922\|Ga0207646_10458098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1150	Open in IMG/M
3300026075\|Ga0207708_11892316	Not Available	523	Open in IMG/M
3300027873\|Ga0209814_10261992	Not Available	750	Open in IMG/M
3300027880\|Ga0209481_10567296	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	588	Open in IMG/M
3300027882\|Ga0209590_10628591	Not Available	690	Open in IMG/M
3300027909\|Ga0209382_10641069	Not Available	1151	Open in IMG/M
3300027961\|Ga0209853_1002657	All Organisms → cellular organisms → Bacteria → Proteobacteria	5401	Open in IMG/M
3300030993\|Ga0308190_1015185	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300030993\|Ga0308190_1078699	Not Available	688	Open in IMG/M
3300031094\|Ga0308199_1033372	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300031545\|Ga0318541_10669610	Not Available	580	Open in IMG/M
3300031847\|Ga0310907_10240229	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	886	Open in IMG/M
3300031910\|Ga0306923_11710293	Not Available	650	Open in IMG/M
3300032003\|Ga0310897_10386402	Not Available	659	Open in IMG/M
3300034664\|Ga0314786_181288	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.38%
Host-Associated	Host-Associated	27.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.62%
Plants	Host-Associated → Plants	27.62%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.81%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.86%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Sand	Environmental → Terrestrial → Soil → Sand	3.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.95%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.86%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_128694641	3300000789	Soil	GGDLFNVVDVDSYRVLVQENLTLVVTLDHSPLVDFDVQLFDADSRQLIQDCGINVVPEVCAQSFVVTSHDIAVDVVVTSAAGAGSYTLTLRAH*
JGI1027J12803_1022888201	3300000955	Soil	VTVDHSPLVDFDIQLFEAETGRLISDCGSNVVPEVCVVPFAVGAGDVAIDIVITSFVGAGTYTLTLDAQ*
Ga0063356_1047042882	3300004463	Arabidopsis Thaliana Rhizosphere	DEDSYRVFIQEDLTLVVTLDHSALVDFDVLLFDADTGQLIRACGTGVVPELCVVAFDVIAEDIALDVVVVSASGAGTYTLELSAE*
Ga0066395_102935831	3300004633	Tropical Forest Soil	LVDFDLQLFDADTGQLIVDCGSNVVPEVCVVPFVIHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0066395_109040982	3300004633	Tropical Forest Soil	SPLVDFDLQLFDADTGQLILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGPYTLTLDAQ*
Ga0066685_103236901	3300005180	Soil	DVDSYRVLVQEDLTLVATLDHSAAVDFDLQFFDADSGQLIRDCGVGVVPEVCAVTFDVRGRDIAVDIVVTSAIGAGGYTLTLHAQ*
Ga0065707_104469591	3300005295	Switchgrass Rhizosphere	VAVAGSLFDPLDVDSYRVVLQESLDLVVTVDHSPLVDFDIQLFEAETGRLISDCGSNVVPEVCVVPFAVGAGDVAIDIVITSFVGAGTYTLTLDAQ*
Ga0070708_1000512251	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LDHSSLVDFDILLFDAETGQLIRDCGAGVVPEVCTVSFVVRSRAIAVDVVVVSAVGAGPYTLTLDAQ*
Ga0070707_1004853742	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AETGQLIRDCGAGVVPEVCTVSFVVRSRAIAVDVVVVSAVGAGPYTLTLDAQ*
Ga0066903_1018427363	3300005764	Tropical Forest Soil	DPADVDSYRVLIQESLSLVVTLDHSPLVDFDIQLFDADTGQLILDCGSNTVPEVCVVPFVVRAHDIAVDVVVTSVVGAGPYTLTLDAQ*
Ga0066903_1053171612	3300005764	Tropical Forest Soil	YRVFIQESLHLVVTLDHSPLVDFDLQLLDADTGQVILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0075427_100172871	3300006194	Populus Rhizosphere	SPGVDFDVRLFNADTGELILDCGITAVPEVCVVPFVVRSRDLAVDVVVTSAVGAGAYTLELDVQ*
Ga0075421_1001737321	3300006845	Populus Rhizosphere	DVDSYRVLIQESLTLAVTVDHSAFVDFDLLLFDAETGGLIRDCGSPVVPEVCDVAFAVRSRALAVDIVITSAGGAGTYTLTLDAL*
Ga0075421_1015890321	3300006845	Populus Rhizosphere	QLILDCGVSVVPEACTVPFVVGSRDIAVDVVVTSIVGAGSYTLTLDAR*
Ga0075430_1000527922	3300006846	Populus Rhizosphere	VSVDHSPVVDFDVLLFNAETGELIVDCGLPVVPEVCVVPFVVGSRDLAVDVVVTSVIGAGAYTLTLEVQ*
Ga0075431_1009685022	3300006847	Populus Rhizosphere	VDSYRVLIQERLNLVVTVDHSPFVDFDIQLFDADTGQLILDCGSNVVPEVCSVRFAVGAHDIAVDIVITSVVGAGTYTLTLDAQ*
Ga0075433_102649613	3300006852	Populus Rhizosphere	LNLVVTMDHSPGVDFDVRLFNADTGELILDCGITAVPEVCVVPFVVRSRDLAVDVVVTSAVGAGAYTLELDVQ*
Ga0075433_111489631	3300006852	Populus Rhizosphere	LRLVVTVDHSPFVDFDIQLFEAASGQRIADCGSNVVPETCAVPFSVGPQALAVDIVVTSVVGAGTYTLTLDAQ*
Ga0075433_118202221	3300006852	Populus Rhizosphere	SYRVLIQESLRLVVTLDHSPLVDFDIQLFEAESGQLILDCGSNVVPEVCVVPFAVGAVGATVDIVITSVVGAGTYTLTLDAQ*
Ga0075420_1002887131	3300006853	Populus Rhizosphere	VTLDHSPAVDFDVLLFNADTGELLHDCGRAVVPEVCAVSFVVPAGDLAVDVVVTSVIGAGSYTLTLDVQ*
Ga0075420_1006642182	3300006853	Populus Rhizosphere	VGDCAIVAGSLFDPADVDSYRVLVQEDFTLVVTLDHSPLVDFDIQLFNADTGELIRDCGINVVPEICVVPFVVRGRGIAVDVVVTSAIGAGTYTLTIDTQ*
Ga0075420_1008760461	3300006853	Populus Rhizosphere	LVVTLDHSPLVDLDVQLFDADTGQLIQDCGSNVVPEVCPVSFVVRSSDIAVDVVVTSAVGAGSYTLTLRAH*
Ga0075420_1012083141	3300006853	Populus Rhizosphere	ESLRLVVTVDHSPLVDFDIQLFEAASGQLIADCGSNVVPETCAVPFSVGPQALAVDIVVTSVVGAGTYTLTLDAQ*
Ga0075420_1018474052	3300006853	Populus Rhizosphere	HSPGVDFDVLLFNADTGELLQDCGLAVVPEVCAVSFVVPAGDLAVDVVVTSVIGAGSYTLTLDVQ*
Ga0073934_103849182	3300006865	Hot Spring Sediment	VTLEHSPLVDFDVHLIDADTGALILDCGINVVPEICVVPFVVRRFDIAVDVVVTSFTGAGTYTLTLDVR*
Ga0075424_1003791301	3300006904	Populus Rhizosphere	DFDIQLFDADTGQLILDCGSNVVPEVCVVPFAVHGADIAVDVVVTSVVGAGPYTLTLDAQ
Ga0075424_1013051931	3300006904	Populus Rhizosphere	VDVDSYRVLVQESLTLVVTLDHSPLVDFDIQLFDADTGQLILDCGVSVVPEACTVPFVVGSRDIAVDVVVTSIVGAGSYTLTLDAR*
Ga0099793_106972921	3300007258	Vadose Zone Soil	GSLFDPVDVDSYRVLIQESLNLVVTLDHSSFVDFDIQLFDADTGTFILDCGSNVVPEVCVVPFAVGSHDIAVDIVITSVVGAGTYTLTLDAQ*
Ga0105679_107061862	3300007790	Soil	VDFDVQLFDADTGAFIFDCGINVVPEQCVVPFVVGGFDIAVDVVVTSFIGAGTYTLTLDAR*
Ga0099830_102486152	3300009088	Vadose Zone Soil	VVTLDHSPLVDFDIQLFDADTRQLILDCGINVVPEVCAVPFVVSSRDIAVDVVVTSFVGAGSYTLTLRAH*
Ga0099830_110447621	3300009088	Vadose Zone Soil	AETGERILDCGSTVVPAVCEVSFDVNGFDIPVDIVVTPVSGAGPYTLTLRTR*
Ga0099830_117959461	3300009088	Vadose Zone Soil	QSLNLVVTLDHSPFVDFDIQLFEAQSGQLIRDCGSNVVPEVCVVPFAVGSGDLAVDIVITSVVGAGTYTLTLDTQ*
Ga0099827_104743192	3300009090	Vadose Zone Soil	LIQESLNLVVTVDHSPFVDFDIQLFDADTGQLILDCGSNVVPEICVVPFAVRSRDIAVDIVITSVIGAGTYTLTLDAQ*
Ga0099827_116158721	3300009090	Vadose Zone Soil	TDVDSYRVLIQEDLTLVVTLDHSSLVDFDLQLFDADTGQLIRACGTARVPEVCAVSFAVCSHAIAVDVVVTSHIGAGTYTLTLDAQ*
Ga0099827_116680121	3300009090	Vadose Zone Soil	VDVDSYRILVQESLRLVVTLDHSPLVDFDIQLFDADTGQLILGCGINVVPEVCVVPFVVRSRDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0111539_109311721	3300009094	Populus Rhizosphere	FDILLFDAETGGLIRDCGSPVVPEVCDVAFAVRSRALAVDIVITSAGGAGTYTLTLDAL*
Ga0075418_102215763	3300009100	Populus Rhizosphere	DFDVLLFNADTGELLHDCGRAVVPEVCAVSFVVPAGDLAVDVVVTSVIGAGSYTLTLDVQ
Ga0075418_105386051	3300009100	Populus Rhizosphere	ETLTLVVSVDHSPVVDFDVLLFNAETGELIVDCGLPVVPEVCVVPFVVGSRDLAVDVVVTSVIGAGAYTLTLEVQ*
Ga0075418_115637911	3300009100	Populus Rhizosphere	DHSPVVDFDVLLFNAETGELIVDCGLPVVPEVCVVPFVVGSRDLAVDVVVTSFRGAGSYTLTLDVQ*
Ga0075423_118122172	3300009162	Populus Rhizosphere	ADTGDLILDCGITAVPEGCVVPFVVRSRDLAVDVVVTSAVGAGAYTLELDVQ*
Ga0114945_102578761	3300009444	Thermal Springs	DTGQLISDCGIAVVPEVCAVSFVVRSHDIAVDVVVTSFIGAGTYTLTLDAL*
Ga0105249_130279932	3300009553	Switchgrass Rhizosphere	VDFDVQLFDADTGQLIVDCGSNVVPEGCAVTIVVRGFDIAVDVVVSSVIGAGTYTLTLDAP*
Ga0114944_10070063	3300009691	Thermal Springs	VQESLTLVVTLDHSPLVDFDVQLFDADTGQLISDCGIAVVPEVCAVSFVVRSRDIAVDVVVTSFIGAGTYTLTLDAQ*
Ga0126374_107339752	3300009792	Tropical Forest Soil	ESLHLVVTLDHSPLVDFDLQLFDADTGQLIVDCGSNVVPEVCVVPFVIHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0105070_10508802	3300009815	Groundwater Sand	DIQLFDADTGQLISDCGINVVPEVCEVLFTVRSSDIAVDVVVTSFIGAGTYTLTLDAQ*
Ga0105064_11316842	3300009821	Groundwater Sand	DGRIFDPTDVDSYRVLVQESLSLAVTLDHSSLVDFDIQLFDADTGQLILDCGINVVPEVCVVPFVVGSIDIAVDVVVTSFIGAGTYTLTLDAQ*
Ga0126380_101557083	3300010043	Tropical Forest Soil	LHLVVTLDHSPLVDFDLQLFDADTGQLIVDCGSNVVPEVCVVPFVIHAHDIAVDVVVTSVVGAGPYTLTLDAQ*
Ga0126384_114692361	3300010046	Tropical Forest Soil	VDFDIQLFEAETGRLITDCGSNVVPEVCVIPFAVGAGDVAIDIVITSFIGAGTYTLTLDAQ*
Ga0126384_120502991	3300010046	Tropical Forest Soil	DHSPLVDFDLQLFDADTGQVIRDCGSTVVPEVCVVPFVIHAHDIAVDVVVTSVVGAGPYTLTLDAQ*
Ga0126384_124510011	3300010046	Tropical Forest Soil	HSPLVDFDLQLFDADTGQVMVDCGSTVVPDVCVVPFVVHVHDMAVDVVVTSVVGTGTYTLTLDAQ*
Ga0126382_101001223	3300010047	Tropical Forest Soil	PADVDSYRVFIQESLHLVVTLDHSPLVDFDLQLFDADTGQLILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0126382_102107021	3300010047	Tropical Forest Soil	FDLQLFDADTGQLIVDCGSNVVPEVCVVPFVIHAHDIAVDVVVTSVVGAGPYTLTLDAQ*
Ga0126382_108952381	3300010047	Tropical Forest Soil	FEAETGRLISDCGSNVVPEVCVVPFAVGAGDVAIDIVITSFIGAGTYTLTLDAQ*
Ga0126370_102418153	3300010358	Tropical Forest Soil	LDHSPLVDFDIQLFDADTGQLILDCGSTVVPEVCVELFVIHAHDIAVDVVVTSVVGAGPYTLTLDAP*
Ga0126372_113954731	3300010360	Tropical Forest Soil	TLVVTLDHSSQVNFAVQLLDADTGQLIRDCGSGVVLEVCVVPFVVRSRDIAVDVVVTSVSGAGPYTLTLDAQ*
Ga0126372_129557041	3300010360	Tropical Forest Soil	LDHSPLVDFDLQLFDADTGQLIVDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0126377_114395261	3300010362	Tropical Forest Soil	AVAGNLFDPLDVDSYRVVLQESLDLVVTVDHSPLVDFDIQLFEAETGRLISDCGSNVVPEVCVVPFAVGAGDVAIDIVITSFVGAGTYTLTLDAQ*
Ga0126377_125496322	3300010362	Tropical Forest Soil	LDADSYRVVLQESLDLVVTVDHSPLVDFDIQLFEAETGRLITDCGSNLVPEVCVIPFAVGAGDVAIDIVITSFVGAGTYTLTLDAQ*
Ga0126379_104667482	3300010366	Tropical Forest Soil	VAVAGSLFDPADVDSYRVFIQESLHLVVTLDHSPLVDFDLQLFDADTGQLMVDCGSTVVPDVCVVPFVVHVHDMAVDVVVTSVVGAGPYTLTLDAQ*
Ga0126383_119149612	3300010398	Tropical Forest Soil	DCVAVAGSLFDLADVDSYRVVIDEPLRLVVTLDHSPVVDFDVQVVEAESGQLILDCGSNVVPEVCVVPFAAGGATVDIVITSVVGAGTYTLTLDAQ*
Ga0126383_133733201	3300010398	Tropical Forest Soil	DPADVDSYRVLIQESLHLVVTLDHSPLVDFDLQLFDADTGQLIVDCGSNVVPEVCVVPFVIHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0134127_134546371	3300010399	Terrestrial Soil	YRVLVQESLTLVVTLDHSPFVDFDVQLFDADTGQLIADCGSNVVPEGCAVSFVVRGFDIAVDGVVSSVIGAGTYTLTPDAP*
Ga0137391_109544911	3300011270	Vadose Zone Soil	ESLSLVVTLDHSRQVDFDIQLFDADTGQLILDCGTGVVPEVCVVPFAVGSRDIAVDVVVFSVVGAGTYTLTLDAQ*
Ga0137393_110375301	3300011271	Vadose Zone Soil	LNLVVTVDHSPFVDFDIQLFDADTGQLILDCGSNVVPEICVVPFAVRSRDIAVDIVITSVVGAGTYTLTLDPQ*
Ga0137389_105366122	3300012096	Vadose Zone Soil	VDFDIQLFDADTGQLILDCGSNVVPEVCVVPFAVHGADIAVDVVVTSVVGAGPYTLTLDAH*
Ga0137365_104606333	3300012201	Vadose Zone Soil	SYRVLVQENLTLVVTLDHSAGVDFDVQLFDADTGQLIRDCGINVVPEVCPVSFVVRGSDIAVDVVVTSFIGAGTYTLTLDAQ*
Ga0137380_103823192	3300012206	Vadose Zone Soil	FDADTGQLIQDCGINVVPEVCTVPFVVRSGDIAVDVVVTSAVGAGSYTLTLRAQ*
Ga0150985_1196509062	3300012212	Avena Fatua Rhizosphere	LTLVVSLDHSPLVDFDIQLFDADTGQLILDCGISVVPEVCTVPFVVRSRDIAVDVVVTSFVGAGSYTLTLDAR*
Ga0137375_100228381	3300012360	Vadose Zone Soil	SGSIFDPADVDSYRVLVQESVILDVTLDHSSLVDFDIQLFDADTGQLIRDCGINVVPEVCAVSFDVGSGDIAVDVVVTSFIGAGTYTLTLDAQ*
Ga0137375_106505601	3300012360	Vadose Zone Soil	VDFDVQFFDADTQQLLLDCGSPLVPEGCVVPFTVRGRDIAVDVVVTSVIGTGTYTLTLEAQ*
Ga0137361_114661281	3300012362	Vadose Zone Soil	ADTGQLILDCGINVVPEVCTVPFIVRSGDIAVDVVVTSAVGAGSYTLTLRAQ*
Ga0137361_116157801	3300012362	Vadose Zone Soil	CVAVAGSLFDPVDVDSYRVLIQQSLNLVVTLDHSPFVDFDIQLFEAQSGQLIRDCGSNVVPEVCVVPFAVGSGDLAVDIVITSVVGAGTYTLTLDTQ*
Ga0137361_116258301	3300012362	Vadose Zone Soil	VTLDHSPLVDFAIQLFDADTEQLIRDCGVAVVPEVCAVSLVVGARAIAVDVVVDSHI
Ga0134057_12463652	3300012396	Grasslands Soil	VVDEDSYRVLVQENLTLVATLDHSPLVDLDIQLFDADTGQLILDCGINVVPEVCTVPFVVRSGDIAVDVVVTSAVGAGSYTLTLRAQ*
Ga0157338_10707612	3300012515	Arabidopsis Rhizosphere	FDADTGQLILDCGISVVPEVCTVPFVVRSRDIAVDVVVTSVVGAGSYTLTLSTN*
Ga0137373_101790391	3300012532	Vadose Zone Soil	TLDHSLQVDFDVQLFDADTGQLIRDCGPGVVPEVCPVSFVVRAGDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0137395_101561063	3300012917	Vadose Zone Soil	VAGSLFDPVDVDSYRVLIQESLNLVVTLDHSPFVDFDIQLFDADTGTFILDCGSNVVPEVCVVPFAVRSRDIAVDIVITSVVGAGTYTLTLDPQ*
Ga0137419_116076451	3300012925	Vadose Zone Soil	MSIQLFEAQSGQLIRDCGSNVVPEVCVVPFAVGSGDLAVDIVITSVVGAGTYTLTLDTQ*
Ga0126375_104243233	3300012948	Tropical Forest Soil	FDIQLFDADTGQLIQDCGINVVPEVCAQSFVVTSHDIAVDVVVTSAGGAGTYTLTLRAH*
Ga0126375_115308041	3300012948	Tropical Forest Soil	ESLHLVVTLDHSPLVDFDTQLFDADTGQLILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0126369_107503511	3300012971	Tropical Forest Soil	GSLFDPADVDSYRVFIQESLHLVVTLDHSPLVDFDLQLFDADTGQVILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0126369_119139071	3300012971	Tropical Forest Soil	FDLQLFDAETGQLIVDCGSNVVPEVCVVPFVVDAHDMAVDVVVTSVVGAGPYTLTLDAQ*
Ga0126369_125053191	3300012971	Tropical Forest Soil	VTLDHSPLVDFDLQLLDADTGQVILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ*
Ga0126369_129316622	3300012971	Tropical Forest Soil	VDFDIQLFDADTGQLILDCGSNTVPEVCVVPFVVRAHDIAVDVVVTSVVGAGPYTLTLDAQ*
Ga0163162_107607401	3300013306	Switchgrass Rhizosphere	SSFVDFDVQLFDADTGALIQDCGLNIVPEVCTVSFVVGSHDIAVDVAVTSFLGAGSYTLTLDVQ*
Ga0132256_1006176483	3300015372	Arabidopsis Rhizosphere	SLFDPLDVDSYRVVLQESLDLVVTVDHSPLVDFDIQLFEAETGRLISDCGSNVVPEVCVVPFAVRSVDLAVDIVIASVVGAGTYTLTLDAQ*
Ga0182035_108262472	3300016341	Soil	DHSPLVDFDIQLFDADTGQVILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLEAQ
Ga0182039_101399132	3300016422	Soil	VSHSATRSSYRVLIPESLHLVVTLDHSPLVDFDIQLFDADTGQVILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ
Ga0222625_11456581	3300022195	Groundwater Sediment	TGQLMRDCGISAVPEVCVVPFAVGGRALAVDVVVTSVLGAGTYTLTLDAQ
Ga0209827_100502532	3300025149	Thermal Springs	VALDHSLLADFDILLFDADTGQLIRDCGASVVPEVCAVSFVVLSGAIAVDVVVLSEVGAGTYTLTLDAQ
Ga0207646_104580982	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AETGQLIRDCGAGVVPEVCTVSFVVRSRAIAVDVVVVSAVGAGPYTLTLDAQ
Ga0207708_118923161	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DVQLFDADTGQLIVDCGSNLVPEGCAVPFAVRGFDIAVDVVVSSVIGAGTYTLTLDAP
Ga0209814_102619921	3300027873	Populus Rhizosphere	VLLAESLRLVVTVDHSPFVDFDIQLFEAASGQRIADCGSNVVPETCAVPFSVGPQALAVDIVVTSVVGAGTYTLTLDAQ
Ga0209481_105672962	3300027880	Populus Rhizosphere	SPLVDFDIQLFDADTGQLILDCGVSVVPEACTVPFVVGSRDIAVDVVVTSIVGAGSYTLTLDAR
Ga0209590_106285911	3300027882	Vadose Zone Soil	DIQLFDADTGTFILDCGSNVVPEVCVVPFAVSSRAIAVDIVITSVVGAGTYTLTLDAQ
Ga0209382_106410691	3300027909	Populus Rhizosphere	SPAVDFDVLLVNADTGELLQDCGLGVVPEVCAVSFVVPAGALAVDVVVTSVIGAGSYTLTLDVQ
Ga0209853_10026577	3300027961	Groundwater Sand	FDADTGQLISDCGINVVPEVCEVLFTVRSSDIAVDVVVTSFIGAGTYTLTLDAQ
Ga0308190_10151852	3300030993	Soil	VAETFTLVVTLDHSAFVDFDIQLFDAGTGQLIRDCGINVVPEVCVVPFVVTSQSIPVDVVITSALGAGTYTLTIDTQ
Ga0308190_10786992	3300030993	Soil	YRVLVQESLSLVVTLDHSRLVDFDIQLFDADTGQLILDCGSIVVPEVCVVPFAVRSSDIAVDVVVTSVIGAGTYTLTLDAQ
Ga0308199_10333722	3300031094	Soil	LDHSAFVDFDIQLFDAGTGQLIRDCGINVVPEVCVVPFVVTSQSIPVDVVITSALGAGTYTLTIDTQ
Ga0318541_106696101	3300031545	Soil	PESLHLVVTLDHSPLVDFDIQLFDADTGQVILDCGSNVVPEVCVVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ
Ga0310907_102402291	3300031847	Soil	AETGELIVDCGLPVVPEVCVVPFVVGSRDLAVDVVVTSVIGAGAYTLTLEVQ
Ga0306923_117102931	3300031910	Soil	VSHSATRSSYRVLIPESLHLVVTLDHSPLVDFDIQLFDADTGQVILDCGSNVVPEVCAVPFVVHAHDIAVDVVVTSVVGAGTYTLTLDAQ
Ga0310897_103864022	3300032003	Soil	LFNAETGELIVDCGLPVVPEVCVVPFVVGSRDLAVDVVVTSFRGAGSYTLTLDVQ
Ga0314786_181288_2_184	3300034664	Soil	DFDVLLFNADTGELLQDCGLAVVPEVCAVSFVVPAGDLAVDVVVTSVIGAGSYTLTLDVQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095734

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences