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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F095773 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 105 |
| Average Sequence Length | 47 residues |
| Representative Sequence | LARIYLEQKKPDLARAEAQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ |
| Number of Associated Samples | 89 |
| Number of Associated Scaffolds | 105 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 12.38 % |
| % of genes from short scaffolds (< 2000 bps) | 12.38 % |
| Associated GOLD sequencing projects | 82 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.63 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (87.619 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (39.048 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (51.429 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 42.11% β-sheet: 0.00% Coil/Unstructured: 57.89% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.63 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 105 Family Scaffolds |
|---|---|---|
| PF01957 | NfeD | 17.14 |
| PF13428 | TPR_14 | 2.86 |
| PF13181 | TPR_8 | 1.90 |
| PF00574 | CLP_protease | 1.90 |
| PF08123 | DOT1 | 0.95 |
| PF01145 | Band_7 | 0.95 |
| PF05036 | SPOR | 0.95 |
| COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
|---|---|---|---|
| COG0616 | Periplasmic serine protease, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 3.81 |
| COG0740 | ATP-dependent protease ClpP, protease subunit | Posttranslational modification, protein turnover, chaperones [O] | 3.81 |
| COG1030 | Membrane-bound serine protease NfeD, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 1.90 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 87.62 % |
| All Organisms | root | All Organisms | 12.38 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300005554|Ga0066661_10289615 | All Organisms → cellular organisms → Bacteria | 1010 | Open in IMG/M |
| 3300012202|Ga0137363_10567723 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 956 | Open in IMG/M |
| 3300012925|Ga0137419_10479623 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 984 | Open in IMG/M |
| 3300016445|Ga0182038_10269396 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1379 | Open in IMG/M |
| 3300017933|Ga0187801_10289325 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 665 | Open in IMG/M |
| 3300021560|Ga0126371_10433682 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1459 | Open in IMG/M |
| 3300022726|Ga0242654_10119172 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 850 | Open in IMG/M |
| 3300027884|Ga0209275_10805271 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 542 | Open in IMG/M |
| 3300028047|Ga0209526_10325808 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1034 | Open in IMG/M |
| 3300031890|Ga0306925_10517808 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1268 | Open in IMG/M |
| 3300031945|Ga0310913_10225634 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1313 | Open in IMG/M |
| 3300032001|Ga0306922_11987949 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 567 | Open in IMG/M |
| 3300033289|Ga0310914_11566025 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 562 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 20.00% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 15.24% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 11.43% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 8.57% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.71% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 4.76% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.76% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.81% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 2.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.86% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.86% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 2.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.90% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 1.90% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.90% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.95% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.95% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.95% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 0.95% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.95% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.95% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.95% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.95% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.95% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001137 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 | Environmental | Open in IMG/M |
| 3300003219 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 | Environmental | Open in IMG/M |
| 3300003350 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 | Environmental | Open in IMG/M |
| 3300003370 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 | Environmental | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300005171 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 | Environmental | Open in IMG/M |
| 3300005178 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 | Environmental | Open in IMG/M |
| 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
| 3300005554 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 | Environmental | Open in IMG/M |
| 3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010329 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
| 3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300015051 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300017933 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1 | Environmental | Open in IMG/M |
| 3300017942 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3 | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Host-Associated | Open in IMG/M |
| 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300026887 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes) | Environmental | Open in IMG/M |
| 3300027576 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027729 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027768 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027795 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027812 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027857 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300030707 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2) | Environmental | Open in IMG/M |
| 3300030879 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030991 | Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032063 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300033289 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108 | Environmental | Open in IMG/M |
| 3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
| 3300033561 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI1027J11758_116576721 | 3300000789 | Soil | IERTMLARIYLEQRKPDLARAEVEKAVKLAPNYAGAKELLQHLGTNNPTGGAR* |
| JGI12637J13337_10231531 | 3300001137 | Forest Soil | YLEQKKLDLARTEVERALKLAPKYSDAKELLQHLQKVKPSGGAQ* |
| JGI26341J46601_100410091 | 3300003219 | Bog Forest Soil | LDQKKPDLARAEVQRALKIAPNYAEAKDLLAHLQSAKPGATP* |
| JGI26347J50199_10116491 | 3300003350 | Bog Forest Soil | AMVRTTLARVYLEQKKPELARAEAERALKLAPKYAGAKELLEHLQKVKPSGGAQ* |
| JGI26337J50220_10070672 | 3300003370 | Bog Forest Soil | LAQKKPEMARVEAERALKLAPKYADAKELLEHLQKVKPSGGAQ* |
| Ga0062389_1020000482 | 3300004092 | Bog Forest Soil | LEQKKVDLARAELEKALKLAPKYPDAKELLEHLQKVKPSGGAK* |
| Ga0062389_1030347722 | 3300004092 | Bog Forest Soil | AQKKPEMARVEAERALKLAPKYADAKELLEHLQKVKPSGGAQ* |
| Ga0066677_108586352 | 3300005171 | Soil | YLEQKKNDLARTELERALKLAPNYAEAKQLLEHLKAAKPGGD* |
| Ga0066688_106406771 | 3300005178 | Soil | SLARIYVEQKKNDLARAELDRALKLAPNYAEAKTLLEHLQPTKPNGNKK* |
| Ga0070666_114116232 | 3300005335 | Switchgrass Rhizosphere | RTMLAKVYLDQKKIDLARTELERVLKLAPNYTEAKVLLDHLQNSKPGGTH* |
| Ga0070709_113048942 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | KKPDFARTELERVLKLAPNYTEAKVLLEHLQNAKPDGTH* |
| Ga0070713_1002705282 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | ARIYLEQKKNDLARTELERAVKLAPNYAEAKQLLEHLKAVKPGGDSK* |
| Ga0066661_102896151 | 3300005554 | Soil | LARIYVEQKKNDLARAELDRALKLAPNYAEAKTLLEHLQPTKPNGNKK* |
| Ga0070763_107952672 | 3300005610 | Soil | VRTTLARVYLEQKKLDLARTEVQRALKLAPKYSDAKELLEHLQKVKPSGGAQ* |
| Ga0070765_1017264522 | 3300006176 | Soil | VVRTTLARVYLEQKKLDLARTEVERALKLAPKYSDAKELLEHLQKVKPSGGAQ* |
| Ga0079221_112021432 | 3300006804 | Agricultural Soil | YLEQKKPGLARAEAQRALKLAPNYSEAKQLLERLQVFKPNGGAQ* |
| Ga0066710_1045340151 | 3300009012 | Grasslands Soil | KKNDLARAELDRALKLAPNYAEAKTLLEHLQPTKPNGNKK |
| Ga0099829_102077002 | 3300009038 | Vadose Zone Soil | TGRVMLARIYLEQKKPGFARAEVEKAVKLAPNYTEAQQLLDHLRKSKPTGGAQ* |
| Ga0099830_103497962 | 3300009088 | Vadose Zone Soil | EQKKIDLARAEVQRALQLAPSYSEAKQLLEHLQNSKPNGGAQ* |
| Ga0066709_1027747872 | 3300009137 | Grasslands Soil | KNDLARTELERALKLAPNYAEAKQLLEHLKAAKPGGD* |
| Ga0099792_105269972 | 3300009143 | Vadose Zone Soil | YLEQKKPDLARAEAQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ* |
| Ga0105248_100997721 | 3300009177 | Switchgrass Rhizosphere | KVYLDQKKIDLARTELERVLKLAPNYTEAKVLLDHLQNSKPGGTH* |
| Ga0126380_107189231 | 3300010043 | Tropical Forest Soil | RIFIEQKKNDRARTELERALKLAPNYAEAKQLLSHLQGAKPAGAPK* |
| Ga0134111_101725251 | 3300010329 | Grasslands Soil | IYLEQKKNDLARTELERALKLAPNYAEAKQLLEHLKAAKPGGD* |
| Ga0126376_115008671 | 3300010359 | Tropical Forest Soil | ARIYLEQKKNDLARTELERTLKLAPKYAEAKQLLDHLNAAKPKGTKK* |
| Ga0126378_127396151 | 3300010361 | Tropical Forest Soil | DLARTEAERALKLAPNYTEAKQLLERLQSSKPNGGAQ* |
| Ga0150983_119723421 | 3300011120 | Forest Soil | TLARVYLEQKKLDLARTEVERALKLAPKYSDAKELLQHLQKVKPSGGAQ* |
| Ga0150983_140321106 | 3300011120 | Forest Soil | RIYLEQKKLDLARTELERALKLAPKYPDAKELLEHLQKVKPSGGSQ* |
| Ga0137389_108717373 | 3300012096 | Vadose Zone Soil | LARVEVQRALKLAPNYSEAKQLLEHLQKPNGGAQ* |
| Ga0137388_101821741 | 3300012189 | Vadose Zone Soil | RVYLEQKKTDLARAEVQRALKLAPNYSEAKQLLEHLQSPKPNGGAH* |
| Ga0137363_100212075 | 3300012202 | Vadose Zone Soil | LARAEVQRALKLAPNYSEAKQLLEHLPKSKPSGGAQ* |
| Ga0137363_104325251 | 3300012202 | Vadose Zone Soil | RAEVQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ* |
| Ga0137363_105677232 | 3300012202 | Vadose Zone Soil | DHVSLARIYLEQKKNDLARTELERALKLAPNYAEAKQLLEHLKAAKPGGDKK* |
| Ga0137399_105912721 | 3300012203 | Vadose Zone Soil | LEQKKPDLARVEAERALKLAPNYSDAKQLLEHLQNTKPGGAAQ* |
| Ga0137399_110124351 | 3300012203 | Vadose Zone Soil | GRVMLARIYLEQKKPELARAEVAKAVKLAPNYTEARQLLEHLEKSKPTGGAR* |
| Ga0137362_110491741 | 3300012205 | Vadose Zone Soil | KTDLARTEVQRALQLAPSYTEAKQLLEHLQNSKPKGGAQ* |
| Ga0137419_102038041 | 3300012925 | Vadose Zone Soil | KNDLARTELERALKLAPNYAKAKQMLEHLKAAKPGGD* |
| Ga0137419_104796232 | 3300012925 | Vadose Zone Soil | SALVRTMLARIYLEQKKPDLARAEVQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ* |
| Ga0137414_10578942 | 3300015051 | Vadose Zone Soil | MLARIYLEQKKPDLARAEAQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ* |
| Ga0137414_10762641 | 3300015051 | Vadose Zone Soil | RAEAQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ* |
| Ga0182038_102693962 | 3300016445 | Soil | SRDSAAVRTTLARIYLEQKKPELARIEVEKAVKLAPHYPPATELLEHLQKNKPTGGAQ |
| Ga0187801_102893252 | 3300017933 | Freshwater Sediment | SAIERTMLARIYLEQKKPDLARTEVEKAVKLAPNYAGAKELLQHLGTNNPTGGAK |
| Ga0187808_100299221 | 3300017942 | Freshwater Sediment | YDLARAEVQKAIKIAPNYSEAKELLEHLETSKPTGGVP |
| Ga0187817_102195852 | 3300017955 | Freshwater Sediment | TMLARIYLEQKKPDLARSEVEKAVKLAPNYAGAKELLKNLGTNNPTGGAK |
| Ga0210407_101588371 | 3300020579 | Soil | EQRKTDLARTEVRRALQLAPNYPEAKQLLEHLQNSKPNGGAR |
| Ga0210401_101769363 | 3300020583 | Soil | GRVMLARIYLEQKKPELARAEVEKAVKLAPNYAEAQQLLDHLRKSKPTGGAQ |
| Ga0210406_107838521 | 3300021168 | Soil | ARIYLEQKKPDLARVEAERALKLAPNYSEAKQLLEHLKNTKPGGAAQ |
| Ga0210388_103700432 | 3300021181 | Soil | TLARIYLEQKKLDFARTELERALKLAPKYPDAKELLEHLQKVKPSGGSQ |
| Ga0210397_113890022 | 3300021403 | Soil | IYLEQKKPDLARAEVQRALKLAPNYSEAKQLLEHLPKSKSSGGAQ |
| Ga0210394_112103902 | 3300021420 | Soil | VHTILARIYLEQKKPDLAKAEVEKAVQLAPNYPEAKELLEHLEKNKSTGGAK |
| Ga0210394_116572572 | 3300021420 | Soil | RVMLARIYLEQKKPELARAEVEKAVKLAPNYAEARQLLDHLEKSKPTGGKK |
| Ga0210391_103437981 | 3300021433 | Soil | LARTEVQRALKLAPKYSDAKELLEHLQKVKPSGGAQ |
| Ga0210402_109757151 | 3300021478 | Soil | KKPDLARAEVQRALKLAPNYSEAKQLLEHLQNSKPSGGAQ |
| Ga0210402_115431372 | 3300021478 | Soil | ARTTLARVYLDQKKPDLALAEVQKAVKIAPNFTEAKDLLEHLEKTKQPGGAQ |
| Ga0210410_100177051 | 3300021479 | Soil | RIYLEQKKVELARAELEKALKLAPKYPDAKELLEHLQKVKPSGGSQ |
| Ga0126371_104336822 | 3300021560 | Tropical Forest Soil | RDSAAVRTTLARIYLEQKKPELARIEVEKAVKLAPHYPPATELLEHLQKNKPTGGAR |
| Ga0126371_131994192 | 3300021560 | Tropical Forest Soil | ARVYLEQKKPELAKAEVQRALKLAPKYADAKELMDRLQKVKSSGGAQ |
| Ga0242654_101191722 | 3300022726 | Soil | VEQKKPDLARAEAEHALKLAPNYSEAKQLLEHLQNTKPGGTKP |
| Ga0228598_10413952 | 3300024227 | Rhizosphere | TTLARVYLEQKKLDLARTEVEKALKLAPNYSDAKELLEHLQKVKPSGGAQ |
| Ga0207699_111591371 | 3300025906 | Corn, Switchgrass And Miscanthus Rhizosphere | QKKPDFARTELERVLKLAPNYTEAKVLLEHLQNAKPDGTH |
| Ga0207700_118047872 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | IYLEQKKLDLARAEAQRALKLAPNYTEAKQLLEHLQSSKPSGGAE |
| Ga0207711_103661331 | 3300025941 | Switchgrass Rhizosphere | KVYLDQKKIDLARTELERVLKLAPNYTEAKVLLDHLQNSKPGGTH |
| Ga0209240_11127782 | 3300026304 | Grasslands Soil | KPDLARTEVQRALKLAPNYSEAKQLLEHLPKSKPSGGAQ |
| Ga0179587_103180802 | 3300026557 | Vadose Zone Soil | ALVRTILARIYLEQKKPDLARVEVQRALKLAPNYSEAKQLLEHLPKSKPSGGAQ |
| Ga0207805_10257782 | 3300026887 | Tropical Forest Soil | RTTLARVYLEQKKPDLARIEVEKAVKLAPHYPPATELLEHLQRNKPTGGAQ |
| Ga0209003_11182371 | 3300027576 | Forest Soil | LARIYLEQKKPQLARAEVEKAVKLAPNYAEARQLLEHLEKSKPTGGAQ |
| Ga0209588_12259772 | 3300027671 | Vadose Zone Soil | IYLEQKKPDLARAEVQRALQLAPNYTEAKQLLEHLQNSKPHGGAP |
| Ga0209248_100728752 | 3300027729 | Bog Forest Soil | VYLEQKKLDLARNELERALKLAPKYPDAKELLEHLQKVKPSGGAK |
| Ga0209772_100215871 | 3300027768 | Bog Forest Soil | LDLACAELQHALKLAPNYTEAKELLEHLQGPKSGATP |
| Ga0209139_101552671 | 3300027795 | Bog Forest Soil | YLEQKKPDLARAEVERALKLAPKYADAKVLLEHLQKGKPSGGAQ |
| Ga0209656_104608782 | 3300027812 | Bog Forest Soil | AVRTTLARIYLEQKKPDLARAEVEKAVHLAPNYPEAKELLEHLDKGKSTGGAQ |
| Ga0209180_100202161 | 3300027846 | Vadose Zone Soil | VYLEQKKTNLARAEAERALKLAPNYSEAKQLLEHLQKQKPPGGAQ |
| Ga0209180_103309072 | 3300027846 | Vadose Zone Soil | TGRVMLARIYLEQKKPGFARAEVEKAVKLAPNYTEAQQLLDHLRKSKPTGGAQ |
| Ga0209166_106443691 | 3300027857 | Surface Soil | GRVMLARIYLEQKKPQLARAEVEKAVKLAPNYAEARQLLEHLEKSKPTGGAQ |
| Ga0209275_108052712 | 3300027884 | Soil | SAVVRTTLARVYLEQKKLDLARTEVERALKLAPKYSDAKELLEHLQKVKPSGGAQ |
| Ga0209488_111953671 | 3300027903 | Vadose Zone Soil | LARIYLEQKKPDLARAEAQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ |
| Ga0209583_100261363 | 3300027910 | Watersheds | IYLEQRKPDLARAEVKRALQLAPNYAEAKQLLQHLQNSKPNGGAQ |
| Ga0209526_103258081 | 3300028047 | Forest Soil | SALVRTLLAKVYLDQKKFDLARAEAERALKLAPNYTEAKQLLEHLQNSKPHGGAH |
| Ga0137415_104643212 | 3300028536 | Vadose Zone Soil | EQKKPDLARAEVQRALKLAPNYTEAKQLLEHLQSSKPSGGAQ |
| Ga0310038_101934911 | 3300030707 | Peatlands Soil | TLARIYLEQKKPDLARAEVEKAVKLAPNYADAKALLEHLQPGKPTGGKK |
| Ga0265765_10392661 | 3300030879 | Soil | RIYLEQKKVDLARTELERALKLAPKYPDAKELLEHLQKVKPSGGAQ |
| Ga0073994_117090232 | 3300030991 | Soil | VRTILARIYLEQKKTDLARAEVQRALKLAPNYSEAKQLLEHLQNSKPSGGAQ |
| Ga0310686_1121743722 | 3300031708 | Soil | LARVYLEQKKLDLARTEVERALKLAPKYADAKELLDHLQKVKPPGGAQ |
| Ga0307476_108524712 | 3300031715 | Hardwood Forest Soil | TLARIYLEQKKPALARVEVQRALKLAPNYAEAKELLDHLQSPKTGATP |
| Ga0307476_110754332 | 3300031715 | Hardwood Forest Soil | LARIYLEQKKPDLARAEVERALKLAPKYADAKELLDHLQKVKPSGGAQ |
| Ga0307468_1013374162 | 3300031740 | Hardwood Forest Soil | ATGRVMLARIYLEQKKPELARVEVEKAVKLAPNYTEARQLLEHLEKSKPTGGAR |
| Ga0307477_104414212 | 3300031753 | Hardwood Forest Soil | KTDLARTEVRRALQLAPNYPEAKQLLEHLQSSKPSGGAQ |
| Ga0307477_108059181 | 3300031753 | Hardwood Forest Soil | ARIYLEQKKPELARAEVEKAVKLAPNYTEARQLLEHLEKSKPTGGAR |
| Ga0307475_103241151 | 3300031754 | Hardwood Forest Soil | TMLARIYLEQKKPELARAEAQRALKLAPNYSEAKQLLEHLPTSKPSGGAQ |
| Ga0307478_113818931 | 3300031823 | Hardwood Forest Soil | LEQKKTDLARTEVRRALQLAPNYPEAKQLLEHLQSSKPNGGAQ |
| Ga0306925_105178082 | 3300031890 | Soil | SAAVRTTLARIYLEQKKPELARIEVEKAVKLAPHYPPATELLEHLQKNKPTGGAQ |
| Ga0310913_102256341 | 3300031945 | Soil | SAAVRTTLARVYLEQKKPDLARIEVEKAVKLAPHYPPATELLEHLQKNKPTGGAR |
| Ga0306926_107141931 | 3300031954 | Soil | LARIYLEQKKPELARIEVEKAVKLAPHYPPATELLEHLQKNKPTGGAQ |
| Ga0307479_108307522 | 3300031962 | Hardwood Forest Soil | VYLEQKKTDLARTEARRALQLAPNYAEAKQLLEHLQSSKPNGGAQ |
| Ga0307479_119303852 | 3300031962 | Hardwood Forest Soil | KKPDLARAEVQRALQLAPNYTEAKQLLEHLQNSKPHGGAP |
| Ga0306922_103788212 | 3300032001 | Soil | ARIYLEQKKPELARIEVEKAVKLAPHYPPATELLEHLQKNKPTGGAQ |
| Ga0306922_119879491 | 3300032001 | Soil | RDSAIERTMLARIYLEQKKPDLARAEVEKAVKLAPNYAGAKELLQHLGTNHPTGGAK |
| Ga0318504_105589231 | 3300032063 | Soil | TTLARIYLEQKKPELARIEVEKAVKLAPHYPPATELLEHLQRNKPTGGAQ |
| Ga0306924_119230861 | 3300032076 | Soil | TTLARVYLEQKKPDLARIEVEKAVKLAPHYPPATELLEHLQKNKPTGGAR |
| Ga0307470_102277052 | 3300032174 | Hardwood Forest Soil | LEQKKPDLARAEVQRALKLAPNYSEAKQLLEHLPKSKPGGGAQ |
| Ga0307472_1011140011 | 3300032205 | Hardwood Forest Soil | MLARIYLEQKKPDLARAEVQRALKLAPNYTEAKQLLEHLQDSKPSRGAQ |
| Ga0307472_1024880181 | 3300032205 | Hardwood Forest Soil | VMLARIYLEQKKPQLARVEVEKAVKLAPNYTEARQLLEHLEKSKPAGGAQ |
| Ga0310914_115660252 | 3300033289 | Soil | AVRTTLARVYLEQKKPDLARIEVEKAVKLAPHYPPATELLEHLQRNKPTGGAQ |
| Ga0326726_112455742 | 3300033433 | Peat Soil | TTLARIYLVQKKPDLARAELEKAVKLAPNYADAKELLEHLQQGKPTGGKK |
| Ga0371490_11548581 | 3300033561 | Peat Soil | VRTTLARIFLEQKKPELARAEVEKAVKLAPNYPAAKELLEHLQQSKPTGGKK |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |