NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095930

Metagenome Family F095930

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095930
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 113 residues
Representative Sequence VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS
Number of Associated Samples 79
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 37.14 %
% of genes near scaffold ends (potentially truncated) 40.95 %
% of genes from short scaffolds (< 2000 bps) 74.29 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(36.190 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.762 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.
1GPIPI_00307460
2INPgaii200_11803322
3INPhiseqgaiiFebDRAFT_1019888953
4F14TC_1075824672
5Ga0062593_1000003182
6Ga0062595_1000363703
7Ga0062595_1002033692
8Ga0062595_1022716542
9Ga0066395_105323591
10Ga0070690_1004611762
11Ga0066388_1002138862
12Ga0066388_1024530091
13Ga0070687_1002205192
14Ga0070674_1002807423
15Ga0070667_1022394542
16Ga0070711_1003048142
17Ga0070705_1000231014
18Ga0070685_107704701
19Ga0070707_1015921351
20Ga0070695_1012272202
21Ga0070665_1000059444
22Ga0066903_1001868974
23Ga0066903_1034675011
24Ga0066903_1048699052
25Ga0068858_1006484992
26Ga0068858_1006694412
27Ga0070716_1008168621
28Ga0070712_1000304275
29Ga0075425_10000180913
30Ga0075425_1004197221
31Ga0075425_1004420303
32Ga0075425_1005553952
33Ga0075425_1024209301
34Ga0075434_1010854152
35Ga0075435_1006797782
36Ga0075435_1012465481
37Ga0075423_114505742
38Ga0105241_113929801
39Ga0105248_100535601
40Ga0105237_101481562
41Ga0126374_100583103
42Ga0126374_101118922
43Ga0126374_102222532
44Ga0126380_105855102
45Ga0126384_101186873
46Ga0126382_104807221
47Ga0126373_100714642
48Ga0126370_102887382
49Ga0126370_103351673
50Ga0126370_113210492
51Ga0126372_101090941
52Ga0126372_127221651
53Ga0126377_123378881
54Ga0126379_100312033
55Ga0126379_119276432
56Ga0126383_104534031
57Ga0157303_101289361
58Ga0126375_100843213
59Ga0126375_111486522
60Ga0126369_106296641
61Ga0126369_107893611
62Ga0157378_100047637
63Ga0157378_112045693
64Ga0157379_101680333
65Ga0157376_1000000554
66Ga0132258_100171966
67Ga0132258_102048368
68Ga0132258_106377033
69Ga0132258_132221831
70Ga0132256_1004980732
71Ga0132256_1032749952
72Ga0132257_1005411412
73Ga0132255_1022744582
74Ga0182035_100723985
75Ga0126371_108243831
76Ga0247691_10182403
77Ga0247664_11020162
78Ga0247661_10004209
79Ga0247681_10077661
80Ga0207642_104323052
81Ga0207710_101692943
82Ga0207669_109390621
83Ga0207704_106987971
84Ga0207711_117645421
85Ga0207703_104736543
86Ga0207641_101029034
87Ga0207648_106671832
88Ga0207676_105262881
89Ga0209465_100102707
90Ga0318538_102884702
91Ga0318528_100852602
92Ga0318542_103483161
93Ga0318561_102881772
94Ga0307469_100325613
95Ga0307469_109802892
96Ga0318523_103740141
97Ga0318512_104075741
98Ga0318495_101653171
99Ga0318551_102240153
100Ga0318553_102717262
101Ga0318540_103019212
102Ga0307470_100072495
103Ga0307471_1000491854
104Ga0307472_1000811212
105Ga0307472_1002827741
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 49.30%    Coil/Unstructured: 50.70%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110VPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRSSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Tropical Forest Soil
Soil
Soil
Soil
Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Arabidopsis Rhizosphere
20.0%3.8%2.9%13.3%5.7%6.7%5.7%2.9%5.7%4.8%2.9%8.6%2.9%2.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_003074602088090014SoilVPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
INPgaii200_118033222228664022SoilVQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
INPhiseqgaiiFebDRAFT_10198889533300000364SoilVQITIVRNSPDDTQTRQIKIFLDGKNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
F14TC_10758246723300000559SoilVSASEHPPATPARVTIFRNSPEDTQTRQIKIYLDQQNQGELMYGESMTLDVSAGTHTIRVDNTWNRKELAIEVQPGDELQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSGPPHR*
Ga0062593_10000031823300004114SoilVADPENSKPGTARVTVFRDSPEDTQTRQIKIYLDGENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS*
Ga0062595_10003637033300004479SoilVLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS
Ga0062595_10020336923300004479SoilVIVRNSSDDTQTRQIKIFLDGENQGELMFGDSMTLEVSSGAHTIRVDNTWNRKDLALEIHAGQNLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS*
Ga0062595_10227165423300004479SoilVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMR
Ga0066395_1053235913300004633Tropical Forest SoilDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0070690_10046117623300005330Switchgrass RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0066388_10021388623300005332Tropical Forest SoilVSASENPSPATARVTIFRDSPEDTQTRQIKVYLDGQQQGELMYGDAMTLDLMPGVHVLRVDNTWNRKDLSIAVRPGEDLQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPRS*
Ga0066388_10245300913300005332Tropical Forest SoilARFGRSLLSGCAVPAPAHSGSAPGRVTVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0070687_10022051923300005343Switchgrass RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0070674_10028074233300005356Miscanthus RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSPAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0070667_10223945423300005367Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070711_10030481423300005439Corn, Switchgrass And Miscanthus RhizosphereVQITIVRNSPADTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGQRLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070705_10002310143300005440Corn, Switchgrass And Miscanthus RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070685_1077047013300005466Switchgrass RhizosphereFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS*
Ga0070707_10159213513300005468Corn, Switchgrass And Miscanthus RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSR
Ga0070695_10122722023300005545Corn, Switchgrass And Miscanthus RhizosphereHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070665_10000594443300005548Switchgrass RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS*
Ga0066903_10018689743300005764Tropical Forest SoilMPSFRVIAAACVLPAIIPERAAVSASENSSPATARVTIFRDSPEDTQTRQIKIYLDGQQQGELMYGDSMTLDVVPGAHVLRVDNTWNRKDLAIAVRPGEDFQFVTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLRS*
Ga0066903_10346750113300005764Tropical Forest SoilVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0066903_10486990523300005764Tropical Forest SoilVPAPAHSGSAPGRVTVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0068858_10064849923300005842Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0068858_10066944123300005842Switchgrass RhizosphereMSTTLPSPKSSDSTSVGTQITIVRNSSEDTQTRQIIVYLDGENRGELMYGDSMTLDVAPGAHVMRVDNTWNRKDLRIVVQPGEEHRFVTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPLQS*
Ga0070716_10081686213300006173Corn, Switchgrass And Miscanthus RhizosphereVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0070712_10003042753300006175Corn, Switchgrass And Miscanthus RhizosphereVPPPGHSGSATVQITIVRNSPADTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGQRLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075425_100001809133300006854Populus RhizosphereVSLPEHPAAHITVVRNSPDDTQTRQIKIFLDGENHGELMFGDSATLGVNAGSHTIRVDNTWNRKEISFQIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS*
Ga0075425_10041972213300006854Populus RhizosphereMPPPEHSGSTTAQITIVRNSPEDTQTRQIKIFLDGESQGELMFGDSMTLDVGAGAHTLRVDNTWNRKDLAIEISAGENLRFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075425_10044203033300006854Populus RhizosphereMTASAVPHRDHFGSATAQIVIVRNSSDDTQTRQIKIFLDGENQGELMFGDSMTLEVSSGAHTIRVDNTWNRKDLALEIHAGQNLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS*
Ga0075425_10055539523300006854Populus RhizosphereVPPPENSGSATARITIVRNSPEDTQTRQIKIFLDGENQGELMFGDSMTLNVSAGTHAIRVDNTWNRKELTLEIHAGGSLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075425_10242093013300006854Populus RhizosphereVSDLKNSGLGAGRVTIFRNSPDDTQTRQIKVYLDDRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSLEPLPSRPPEP*
Ga0075434_10108541523300006871Populus RhizosphereVSDLKNSGLGAGRVTIFRNSPDDTQTRQIKVYLDDRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSLEP
Ga0075435_10067977823300007076Populus RhizosphereVADSENFKPGTAHITVFRNSPEDTQTRQIKIYLDRQNQGELMYGDSMTLDVAAGTHVLGVDNTWNRKELAIEVQHGDELQFITRSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPQR*
Ga0075435_10124654813300007076Populus RhizosphereRLRRSSAPARFRRSLLIANHVAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0075423_1145057423300009162Populus RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQSGEHLYFLAKSSAGKFAWFLLGFLGAGPMQVSI
Ga0105241_1139298013300009174Corn RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS*
Ga0105248_1005356013300009177Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPS
Ga0105237_1014815623300009545Corn RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRADEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS*
Ga0126374_1005831033300009792Tropical Forest SoilVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHILRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0126374_1011189223300009792Tropical Forest SoilVSDPKNSGFAAGRVTIFRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPIHVSIEPLPSRPPQP*
Ga0126374_1022225323300009792Tropical Forest SoilVPITIVRNSPDDTQTRQIKIFLDGESQGELMFGDSMTLEVSVGAHTIGVDNTWKRKDLAIEIHAGEHLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0126380_1058551023300010043Tropical Forest SoilVSELQDSGLAAGRVTIFRNSPEDTQTRQIKVYLDGRNRGELMFGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126384_1011868733300010046Tropical Forest SoilVSDLQDSGLARGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNYKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126382_1048072213300010047Tropical Forest SoilGRSLLSSTAVSDPKSSGFAAGRVTILRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKLVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126373_1007146423300010048Tropical Forest SoilMPSEKPKDPTAGGQVTIVRNSSDDTQTRQIVIYLDRERKGELMFGDSMTFELTPGAHTLRVDNTWNRQDLSFELRAGDHLQFQTKSTASKFSWFLLGFLGAGPMHVFIEPLPSRT*
Ga0126370_1028873823300010358Tropical Forest SoilVFRNSPADTQTRQIKVYLDGQNQGELMFGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0126370_1033516733300010358Tropical Forest SoilVSDLQDSGLARGRVTIFRNSPEDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126370_1132104923300010358Tropical Forest SoilFMTAETAEQVSETAQITIVRDSSEDTQTRQIVVYLDGQNQGELMFGDSITLDLVPGAHTLRVDNTWNRQDLKLDLRAGEHLQFRTRSSATKFSWFLLGFLGAGPMRVSIEPLPSRA*
Ga0126372_1010909413300010360Tropical Forest SoilPADTQTRQIKVYLDGRNQGELMYGDSMTLDAAPGAHVLRVDNTWNRKDLAIEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0126372_1272216513300010360Tropical Forest SoilMTAETAEQVSETAQITIVRDSSEDTQTRQIVVYLDGQNQGELMFGDSITLDLVPGAHTLRVDNTWNRQDLKLDLRAGEHLQFRTRSSATKFSWFLLGFLGAGPMRVSIEPLPSRA*
Ga0126377_1233788813300010362Tropical Forest SoilSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126379_1003120333300010366Tropical Forest SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLPPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0126379_1192764323300010366Tropical Forest SoilVSFAENTSSANAQITVVRNSADDTQTRQIKVFLDGENQGELMFGDSMTLDVVAGKHTIRVDNTWNRQTLTTEVHSGEHLEFVTKSTAGKFVWFLLGFLGAGPMQVSIEPLPSRSQRQ*
Ga0126383_1045340313300010398Tropical Forest SoilGRSLLSGTAVSELQDSGLAAGRVTIFRNSPEDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDDLEFLTKSSAGKLVWFLLGFLGAGPMHVSIEPLPSRPPQP*
Ga0157303_1012893613300012896SoilVADPENSKPGTARVTVFRDSPEDTQTRQIKIYLDGENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLP
Ga0126375_1008432133300012948Tropical Forest SoilVSDPKNSGFAAGRVTIFRNSPDDTQTRQIKVYLDGRNQGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLALEVRPGDDLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPPEA*
Ga0126375_1114865223300012948Tropical Forest SoilVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIRLDVSPGTHVLRVDNTWNRKDLKIEIRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHSP*
Ga0126369_1062966413300012971Tropical Forest SoilPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP*
Ga0126369_1078936113300012971Tropical Forest SoilMSSAERLETTARITILRNATDDTQTRQIKVYLDGQNRGELMYGDSLALDVPPGAHVLGVDNTWNRKDLALEVHPGRDLRFLTKSSAGRFVWFLLGF
Ga0157378_1000476373300013297Miscanthus RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDLQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR*
Ga0157378_1120456933300013297Miscanthus RhizosphereVLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGA
Ga0157379_1016803333300014968Switchgrass RhizosphereVGTQITIVRNSSEDTQTRQIIVYLDGENRGELMYGDSMTLDVAPGAHVMRVDNTWNRKDLRIVVQPGEEHRFVTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPLQS*
Ga0157376_10000005543300014969Miscanthus RhizosphereVAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132258_1001719663300015371Arabidopsis RhizosphereVPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS*
Ga0132258_1020483683300015371Arabidopsis RhizosphereVLAVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRREPS
Ga0132258_1063770333300015371Arabidopsis RhizosphereVLPATIPDPSAVPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWKRKELAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132258_1322218313300015371Arabidopsis RhizosphereSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132256_10049807323300015372Arabidopsis RhizosphereVPTTEHSASPTAQITIVRDSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132256_10327499523300015372Arabidopsis RhizosphereVAPSDHPVPVTAQITIVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGA
Ga0132257_10054114123300015373Arabidopsis RhizosphereVPTTEHSGSPTAQITIVRDSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIQAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0132255_10227445823300015374Arabidopsis RhizospherePSDHPVPVTAQITLVRNSPADTQTRQIKIFLDGQSQGELMYGDSTTLDVSAGTHTIRVDNTWNGKEITIQIRAGEHLQFLTRSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS*
Ga0182035_1007239853300016341SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSI
Ga0126371_1082438313300021560Tropical Forest SoilAGRGGLERPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP
Ga0247691_101824033300024222SoilVPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLG
Ga0247664_110201623300024232SoilVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0247661_100042093300024254SoilVPLPEHRAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS
Ga0247681_100776613300024310SoilVPLPEHPAAHITVVRNSPDDTQTRQIKLFLDGKNHGELMFGDSATLAVNAGSHTICVDNTWNRKEISIEIRSGEHLRFLTKSSAGKFAWFLLGFLGAGPMRVSIEPVLGIPS
Ga0207642_1043230523300025899Miscanthus RhizosphereVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDLQAGAHTIRADNTWNRRDLQIEVRAGEHLQFMTKSSAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR
Ga0207710_1016929433300025900Switchgrass RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS
Ga0207669_1093906213300025937Miscanthus RhizosphereAAVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLQIEVRAGEHLQFLTKSPAGKFVWFLMGFLGAGPMRVSIEPLPSRSEHR
Ga0207704_1069879713300025938Miscanthus RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGEHLQFLTKSSAGKFVWFLLGFLGAGPMRV
Ga0207711_1176454213300025941Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFL
Ga0207703_1047365433300026035Switchgrass RhizosphereVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDSMTLDVNVGSHTIRVDNTWNRKELIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0207641_1010290343300026088Switchgrass RhizosphereVAGSENSSTETARVTIFRNSPDDTQTRQIKVYLDGQNQGELMFGDSTTLDVSAGAHTIRVDNTWNRRDLEIEVRAGVHLQFLTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPLDS
Ga0207648_1066718323300026089Miscanthus RhizosphereVADPENSKPGTARVTVFRNSPEDTQTRQIKIYLDSENRGELMFGDSMTLEVKAGAHTIGADNTWNRRDLRIEARAGEHLEFMTKSSAGKFVWFLLGFLGAGPMRVSIEPLPSRPEHS
Ga0207676_1052628813300026095Switchgrass RhizosphereRSLLTAVPPTEHSGSPTAQITIVRNSPDDTQTRQIKIFLDGENQGDLMFGDFMTLDVNVGSHAIRVDNTWNRKDLIIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0209465_1001027073300027874Tropical Forest SoilRPAAVARFRRSFLSGVSVAVSDNSASTIGRVTIFRNSPDDTQTRQIIIYLDRQNQGELMFGDSIALDVTPGTHVLRVDNTWNRKELEIDVRAGDDLQFVTKSSAGKFAWFLLGFIGAGPMHVSIEPLPSRPHHP
Ga0318538_1028847023300031546SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318528_1008526023300031561SoilVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318542_1034831613300031668SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMH
Ga0318561_1028817723300031679SoilATYRAMKFPTSRTPSFPAIAGACALRAITPERHRVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0307469_1003256133300031720Hardwood Forest SoilVADSENAKPGTARVTVFRNSPEDTQTRQIKIYLDGENLGELMFGDSMTLDVQAGAHTIRADNTWNRRDLRIEVRAGEHLQFMTKSSAGKFVWFLLGFLGAGPIRVSIEPLPSRSEHR
Ga0307469_1098028923300031720Hardwood Forest SoilVQITIVRNSPDDTQTRQIKIFLDGQNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS
Ga0318523_1037401413300031798SoilSLLSGTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318512_1040757413300031846SoilRSLLSGTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318495_1016531713300031860SoilTAVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318551_1022401533300031896SoilVSDLQDSGLAAGRVTIFRNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPP
Ga0318553_1027172623300032068SoilDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0318540_1030192123300032094SoilNSPDDTQTRQIKVYLDGRNRGELMYGDSMTLDLAPGAHVLRVDNTWNHKDLAMEVRPGDELQFLTKSSAGKFVWFLLGFLGAGPMHVSIEPLPSRPPQP
Ga0307470_1000724953300032174Hardwood Forest SoilVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGESLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0307471_10004918543300032180Hardwood Forest SoilVQITIVRNSPDDTQTRQIKIFLDGENQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMQVSIEPLPSRS
Ga0307472_10008112123300032205Hardwood Forest SoilVPPPGHSGSATVQITIVRNSPDDTQTRQIKIFLDGQNQGELMFGDSMTLDVSVGAHTIRVDNTWNRKDLAIEIHAGERLQFLTKSSAGKFAWFLLGFLGAGPMRVSIEPLPSRS
Ga0307472_10028277413300032205Hardwood Forest SoilVPTTEHSGSPTAQITIVRDSPDDTQTRQIKVFLDGENQGDLMFGDFMTLDVNVGSHTIRVDNTWNHKDLIIEIHAGERLQFLTKSSAGKFAWFL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.