NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F095973

Metagenome / Metatranscriptome Family F095973

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095973
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 85 residues
Representative Sequence MVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRIDRMTKH
Number of Associated Samples 89
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 98.10 %
% of genes from short scaffolds (< 2000 bps) 88.57 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.238 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(17.143 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.286 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 41.07%    β-sheet: 0.00%    Coil/Unstructured: 58.93%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF03401TctC 22.86
PF02771Acyl-CoA_dh_N 15.24
PF01738DLH 15.24
PF00596Aldolase_II 0.95
PF01077NIR_SIR 0.95
PF13701DDE_Tnp_1_4 0.95
PF00296Bac_luciferase 0.95
PF04191PEMT 0.95
PF00589Phage_integrase 0.95
PF01039Carboxyl_trans 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 22.86
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 15.24
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 0.95
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 0.95
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.95
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.19 %
UnclassifiedrootN/A3.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2040502000|ACOD_GAKN62C01EA2VPAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria517Open in IMG/M
2170459010|GIO7OMY01B3MT1All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria515Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0446446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria527Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_10670412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1046148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria672Open in IMG/M
3300000893|AP72_2010_repI_A001DRAFT_1054637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria625Open in IMG/M
3300000955|JGI1027J12803_106207630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria542Open in IMG/M
3300004281|Ga0066397_10013630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71098Open in IMG/M
3300005167|Ga0066672_11007804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria508Open in IMG/M
3300005332|Ga0066388_101168036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1312Open in IMG/M
3300005332|Ga0066388_105900170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria619Open in IMG/M
3300005332|Ga0066388_106763808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria577Open in IMG/M
3300005332|Ga0066388_108488685All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → unclassified Bordetella → Bordetella sp. FB-8511Open in IMG/M
3300005363|Ga0008090_10257559All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria877Open in IMG/M
3300005467|Ga0070706_100262346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71612Open in IMG/M
3300005468|Ga0070707_101864610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10569Open in IMG/M
3300005549|Ga0070704_100945767Not Available777Open in IMG/M
3300005561|Ga0066699_10624911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7773Open in IMG/M
3300005576|Ga0066708_10940161Not Available538Open in IMG/M
3300005713|Ga0066905_100464037All Organisms → cellular organisms → Bacteria → Proteobacteria1044Open in IMG/M
3300005713|Ga0066905_100481558All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300005764|Ga0066903_102072607All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1094Open in IMG/M
3300006173|Ga0070716_100004221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6840Open in IMG/M
3300006173|Ga0070716_100180954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71384Open in IMG/M
3300006175|Ga0070712_100568612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria957Open in IMG/M
3300006847|Ga0075431_101932118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria546Open in IMG/M
3300009012|Ga0066710_100174964All Organisms → cellular organisms → Bacteria3023Open in IMG/M
3300009012|Ga0066710_103447370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860600Open in IMG/M
3300009088|Ga0099830_10199770All Organisms → cellular organisms → Bacteria1564Open in IMG/M
3300009090|Ga0099827_10069433All Organisms → cellular organisms → Bacteria → Proteobacteria2714Open in IMG/M
3300009156|Ga0111538_10794727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1198Open in IMG/M
3300009162|Ga0075423_11865718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria649Open in IMG/M
3300009176|Ga0105242_11734203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria661Open in IMG/M
3300010043|Ga0126380_10526242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7914Open in IMG/M
3300010043|Ga0126380_10993889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria706Open in IMG/M
3300010047|Ga0126382_10262380All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1273Open in IMG/M
3300010358|Ga0126370_12142587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria550Open in IMG/M
3300010360|Ga0126372_11284151All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria760Open in IMG/M
3300010360|Ga0126372_11753196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria663Open in IMG/M
3300010361|Ga0126378_10656208All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1162Open in IMG/M
3300010361|Ga0126378_12501414All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria590Open in IMG/M
3300010362|Ga0126377_10931002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7933Open in IMG/M
3300010362|Ga0126377_11414740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7768Open in IMG/M
3300010366|Ga0126379_11422711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7799Open in IMG/M
3300010376|Ga0126381_102675315All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria713Open in IMG/M
3300010398|Ga0126383_11280283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7823Open in IMG/M
3300010398|Ga0126383_12630825All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria586Open in IMG/M
3300010399|Ga0134127_12163310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria635Open in IMG/M
3300012198|Ga0137364_10368597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1072Open in IMG/M
3300012200|Ga0137382_10250262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1228Open in IMG/M
3300012285|Ga0137370_10050308All Organisms → cellular organisms → Bacteria2233Open in IMG/M
3300012353|Ga0137367_10055003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2983Open in IMG/M
3300012355|Ga0137369_11095671All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria521Open in IMG/M
3300012356|Ga0137371_10366668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1119Open in IMG/M
3300012359|Ga0137385_10024379All Organisms → cellular organisms → Bacteria → Proteobacteria5418Open in IMG/M
3300012361|Ga0137360_10340275All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1254Open in IMG/M
3300012362|Ga0137361_11721384All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria546Open in IMG/M
3300012582|Ga0137358_10898704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria581Open in IMG/M
3300012918|Ga0137396_10950999All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria626Open in IMG/M
3300012923|Ga0137359_10556048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1009Open in IMG/M
3300012923|Ga0137359_10611171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7955Open in IMG/M
3300012957|Ga0164303_10622034Not Available715Open in IMG/M
3300012971|Ga0126369_11448205All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7777Open in IMG/M
3300012971|Ga0126369_11710976All Organisms → cellular organisms → Bacteria → Proteobacteria718Open in IMG/M
3300012971|Ga0126369_11847703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria693Open in IMG/M
3300013297|Ga0157378_12780555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes542Open in IMG/M
3300015373|Ga0132257_102300200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria698Open in IMG/M
3300016371|Ga0182034_10975207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria731Open in IMG/M
3300016387|Ga0182040_10321515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1190Open in IMG/M
3300016404|Ga0182037_11772413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860551Open in IMG/M
3300016445|Ga0182038_12041314All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria519Open in IMG/M
3300018433|Ga0066667_10340933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1186Open in IMG/M
3300018433|Ga0066667_11780968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria556Open in IMG/M
3300018482|Ga0066669_10300511All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum1303Open in IMG/M
3300020580|Ga0210403_10904641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria696Open in IMG/M
3300021560|Ga0126371_10321171All Organisms → cellular organisms → Bacteria → Proteobacteria1679Open in IMG/M
3300025910|Ga0207684_11081213All Organisms → cellular organisms → Bacteria → Proteobacteria668Open in IMG/M
3300025972|Ga0207668_11692203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria571Open in IMG/M
3300026335|Ga0209804_1210528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7793Open in IMG/M
3300026750|Ga0207483_104135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria606Open in IMG/M
3300027061|Ga0209729_1033003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria645Open in IMG/M
3300027548|Ga0209523_1065149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria749Open in IMG/M
3300031679|Ga0318561_10650132All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300031720|Ga0307469_10199405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1561Open in IMG/M
3300031747|Ga0318502_10866292All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria549Open in IMG/M
3300031748|Ga0318492_10065963All Organisms → cellular organisms → Bacteria1724Open in IMG/M
3300031768|Ga0318509_10006152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4854Open in IMG/M
3300031778|Ga0318498_10543006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria510Open in IMG/M
3300031792|Ga0318529_10032328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2176Open in IMG/M
3300031805|Ga0318497_10424827All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria744Open in IMG/M
3300031820|Ga0307473_10944882All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria626Open in IMG/M
3300031832|Ga0318499_10334396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860583Open in IMG/M
3300031879|Ga0306919_11005829All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria637Open in IMG/M
3300031910|Ga0306923_10428745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1502Open in IMG/M
3300031981|Ga0318531_10002902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5723Open in IMG/M
3300032009|Ga0318563_10055240All Organisms → cellular organisms → Bacteria2042Open in IMG/M
3300032025|Ga0318507_10247405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria773Open in IMG/M
3300032035|Ga0310911_10760459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici560Open in IMG/M
3300032041|Ga0318549_10378214All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria638Open in IMG/M
3300032043|Ga0318556_10264791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria898Open in IMG/M
3300032066|Ga0318514_10420810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria709Open in IMG/M
3300032067|Ga0318524_10014616All Organisms → cellular organisms → Bacteria → Proteobacteria3400Open in IMG/M
3300032076|Ga0306924_12460138All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria523Open in IMG/M
3300032261|Ga0306920_100447730All Organisms → cellular organisms → Bacteria → Proteobacteria1919Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil17.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil16.19%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.29%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.67%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.76%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.86%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.90%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.95%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.95%
Fungus GardenHost-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.95%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2040502000Fungus garden microbial communities from Atta colombica in Panama - dump bottomHost-AssociatedOpen in IMG/M
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026750Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-B (SPAdes)EnvironmentalOpen in IMG/M
3300027061Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027548Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ACODB_187417102040502000Fungus GardenMVEQSNSKSSNPDQVPAADYRRGTFVIALVAVALLASLTGNLLSMAFGQGDGWHHISWHRGGFFDGPLSPAQIDDRIDRMTKAYGHRARRDRGSTGQDRKHLQG
F62_069174102170459010Grass SoilMVEQNNGKSAQADPTPSADYHRGLRGTFVLALVAVALSAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQIDDRIDRMTKHMAIELDATAEQQAKLATIA
ICChiseqgaiiDRAFT_044644613300000033SoilMVEQNNGKSPQADPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWXHISWHDGGFLGGLSPAQIDDRIDRM
ICChiseqgaiiFebDRAFT_1067041213300000363SoilMVEQSNGQSKAETPSQDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQ
AF_2010_repII_A01DRAFT_104614833300000580Forest SoilMVEQNNGKSPQADPTPSEDYHRGLRGTFVLALVAVALLAGITGNLLSKAFGQGISWHHISWQEGGFFGGLSPAQIDDRIDRMTKHMAIELDATAE
AP72_2010_repI_A001DRAFT_105463733300000893Forest SoilMVEQNNGKSPQADPTPSEDYHRGLRGTFVLALVAVALLAGITGNLLSKAFGQGISWHHISWQEGGFFGGL
JGI1027J12803_10620763023300000955SoilMVEQSKSPNAEQTPRTRRVRRGAFVLALVAVALVAGLTGNVLSMAFGQGASWHRISWHDGGVFGGPLSPAQ
Ga0066397_1001363013300004281Tropical Forest SoilMVEQNNGQSKAEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGGGWHHIAWHDGGMFGGPLSPAQIDDRIDRMTKH
Ga0066672_1100780413300005167SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQID
Ga0066388_10116803613300005332Tropical Forest SoilMIDQNNITPAGAGQSPASGVRRGRRGTLAIALIAVALVAGVTGNLLSTAFGQGFGWHGSGWHAGGPWSGPLTPAQIDDRIDRM
Ga0066388_10590017023300005332Tropical Forest SoilMSDQSRSSNPDQAPSKRWSRRGTFLLALVAVALAGGVTGNILSVAFGQGDSWHHMRWQHGGFLGGPLSPAQIDDRIDRMTKHMA
Ga0066388_10676380823300005332Tropical Forest SoilMPPETEDKEFRMVDQNNSSNPDQAPSNRRSRRGPLLLALVAVALLAGITGNLLSNAFGQGNSWHHISWHHGGVFGGPLSPAQIDDRIDRMTKHMAIELDA
Ga0066388_10848868513300005332Tropical Forest SoilMVDQNNSSNPDQAPSNRRSRRGALLLALVAVALLAGITGNLLSKAFGQGDSWHHISWHHGGVFGGPLSPAQI
Ga0008090_1025755913300005363Tropical Rainforest SoilMVDQSKSSNPDQAPSNRRSRRGTFLLALVAVALFAGITGNLLSTAFGQGDSWPHIGWHHGGSFGGPLSPAQIDDRIDRMTKHMAIELDATA
Ga0070706_10026234623300005467Corn, Switchgrass And Miscanthus RhizosphereMVEQSNGQSKAETPSQDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLS
Ga0070707_10186461013300005468Corn, Switchgrass And Miscanthus RhizosphereMVEQGNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGTFGGPLSPAQIDDRIDRMTKHMAIEID
Ga0070704_10094576733300005549Corn, Switchgrass And Miscanthus RhizosphereMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSP
Ga0066699_1062491123300005561SoilMVEQSNGQSKAETPSQDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAI
Ga0066708_1094016113300005576SoilMAEQNNGKSPQADPTPSEDYRRGLRGTFVLALVAVALVAGITGNLLSKAFGQGISWHHISWHEGGFFGGLSPAQIDDRID
Ga0066905_10046403713300005713Tropical Forest SoilMVEQSNGQSKADQTPSEDFRRGRRGTFVIALVAVALLAGLSGNLLSKAFGQGEGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLAIELDAT
Ga0066905_10048155823300005713Tropical Forest SoilMVDQSKSSNPDQAPSNRRSRRGAFLIALVAVALLAGLTGNLLSKAFGQSDGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLAIELD
Ga0066903_10207260733300005764Tropical Forest SoilMVEQSNGQSKPEQTPSEDYRRGRRGTFAIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGG
Ga0066903_10741523923300005764Tropical Forest SoilMVDQSKSSNQDQAPINRRSRRGTFLLALVAVALFAGITGNLLSTAFGQGDSWPHIGWHHGGSFG
Ga0070716_10000422153300006173Corn, Switchgrass And Miscanthus RhizosphereMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQIDDRIDRMTKHM
Ga0070716_10018095423300006173Corn, Switchgrass And Miscanthus RhizosphereMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTK
Ga0070712_10056861223300006175Corn, Switchgrass And Miscanthus RhizosphereMVEQNNGKSPQADPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQIDDRIDRMTKHMAIELDATAEQQAKLATIAKAAVADLRP
Ga0075431_10193211813300006847Populus RhizosphereMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQVDDRIDRM
Ga0066710_10017496443300009012Grasslands SoilMVEQSNGQSKAETPSQDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEID
Ga0066710_10344737013300009012Grasslands SoilMAEQNNGKSPQADPTPSEDYRRGLRGTFVLALVAVALVAGITGNLLSKAFGQGISWHHISWHEGGFFGGLSPAQIDDRIDRMTKHMAIELDATAEQQAKLATIAKAAVTD
Ga0099830_1019977033300009088Vadose Zone SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRIDRMT
Ga0099827_1006943313300009090Vadose Zone SoilMVEQSNGQSKAETPSQDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDD
Ga0111538_1079472723300009156Populus RhizosphereMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQVDDRIDRMTKHIAVELDATAEQQAKL
Ga0075423_1186571823300009162Populus RhizosphereMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQVDDRIDRMTKHIAVELDATAEQQAKLATIAKAAVADLRP
Ga0105242_1173420323300009176Miscanthus RhizosphereMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQVDDRIDRMTKHMAIELDATQDQQVKLANIAKAAVADLRPL
Ga0126380_1052624213300010043Tropical Forest SoilMVGQNNGQSKAEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGGGWHHIAWHDGGMFGGP
Ga0126380_1099388933300010043Tropical Forest SoilMAEQHNGKSPQADPIPSEDYRRGRRGTFLVALVAAALLAGITGNLLSKAFGQGISWQHINWHGGGFFGGPLSPAQIDDRIDRMAKHMAIELDATAEQQAKLATI
Ga0126382_1026238023300010047Tropical Forest SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSRAQIDERIARMTKHMA
Ga0126370_1214258713300010358Tropical Forest SoilMVEQSNGQSKPEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEIDA
Ga0126372_1128415113300010360Tropical Forest SoilMVEKEFRMVDQSKSSNPEQAPSNRRSHRGAFLIALVAVALLAGITGNLLSTAFGQGDGWHHISWRHGGFFGGP
Ga0126372_1175319613300010360Tropical Forest SoilMVEPNNDTSTQADPTLSDDYRRGRRGRLLVALVAVALLAGITGNLLSKAFGQGISWHHISWHDGGFLGGPLSPAQIDDRVDRMTKHMAIE
Ga0126378_1065620823300010361Tropical Forest SoilMVEQSNGQSKADQTPSEDFRRGRRGTFVIALVAVALLAGLSGNLLSKAFGQGEGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLAIELDATA
Ga0126378_1250141413300010361Tropical Forest SoilMVEHSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSLAQIDDRIDRMTKHMAIEIDA
Ga0126377_1093100213300010362Tropical Forest SoilMVEQSNGQSKADQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIHWHDGGMFGGPLSP
Ga0126377_1141474023300010362Tropical Forest SoilMVGQNNGQSKAEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGGGWHHIAWHDGGMFGGPLSPAQ
Ga0126379_1142271123300010366Tropical Forest SoilMVEQNNGQSKAEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGGGWHHIAWHDGGMFGGPL
Ga0126381_10267531523300010376Tropical Forest SoilMVEQSNGQSKADQTPSEDFRRGRRGTFVIALVAVALLAGLSGNLLSKAFGQGEGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLA
Ga0126383_1128028323300010398Tropical Forest SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGVTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEI
Ga0126383_1263082523300010398Tropical Forest SoilMVEQSNGQSKPEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRID
Ga0134127_1216331013300010399Terrestrial SoilMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQIDDRIDRMTKH
Ga0137364_1036859713300012198Vadose Zone SoilMAEQNNGKSPQADPTPSEDYRRGLRGTFVLALVAVALVAGITGNLLSKAFGQGISWHHISWHEGGFFGGLSPAQIDDRIDRMTKHMAIELDATAEQQAKLATIAKAAVTDLRPLQEKA
Ga0137382_1025026213300012200Vadose Zone SoilMVEHNNGKSPQAGPTPSEDYRRGLRGTFVLALVAVALLAGVTGNLLSQAFGQGNSWHHISWHDGGFFGGQLSPAQIDDRIDRMTKHMAIELDATAEQQAKLATIAKAAVTDLR
Ga0137370_1005030833300012285Vadose Zone SoilMVEQSNGKPSQAGQVPSEDQRRGRRGTFLIALVAVALVAGITGNLLSKAFGQGDSWQHISWHDGGVFGGPLSPAQIDDRIDRM
Ga0137367_1005500333300012353Vadose Zone SoilMVEQGNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQID
Ga0137369_1109567113300012355Vadose Zone SoilMVEQSNGKPSQAGQVPPEDHRRGRRGTFLIALVAVALVAGITGNLLSKAFGQGGSWHHISWHDGGVFGGPLSPAQIDD
Ga0137371_1036666813300012356Vadose Zone SoilMVEQSNSTPSQAEQIRSGDDRRGRRGTFLIALVAVALVAGLTGNLLTKAFGQGDGWHRISWHDGGVFGGPLSPAQIDDRIDRMTKHMAIELDATADQQAK
Ga0137385_1002437913300012359Vadose Zone SoilMVEQGNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGTLSPAQIDDRIDRMTKHMA
Ga0137360_1034027523300012361Vadose Zone SoilMVEQSNGQSKADQTPSADHRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGAGWHHIAWHDSGMFGGPLSPA
Ga0137361_1172138423300012362Vadose Zone SoilMVEQSKSSNVDQTPSSRRGRRGAFVLALGAVALVAGLTGNMLSNAFGQGHTWHHISWHNGGVFGETLSPAQVDDRIERMTKHLAIE
Ga0137358_1089870423300012582Vadose Zone SoilMVEQSNGQSKAETPSEDYRRGRRGTFMIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRI
Ga0137396_1095099923300012918Vadose Zone SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRIDRMTKH
Ga0137359_1055604813300012923Vadose Zone SoilMVEQSNGKSSQADQIPSEHHRRGRRGTFLIALVAVALLAGITGNLLSKAFGQGDSWHRISWHDGGVF
Ga0137359_1061117113300012923Vadose Zone SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHM
Ga0164303_1062203423300012957SoilMVDQNNDQSAQTDPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLS
Ga0126369_1144820513300012971Tropical Forest SoilMVEQNNGQSKAEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGGGWHHIAWHDGGMFGGPLSP
Ga0126369_1171097623300012971Tropical Forest SoilMVEQSNGQSKADQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLAIELDATA
Ga0126369_1184770323300012971Tropical Forest SoilMVEHSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHM
Ga0157378_1278055513300013297Miscanthus RhizosphereMVEQNNDQSAQADPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQVDDRIDRMTKHIAVELDATAEQQAK
Ga0132257_10230020023300015373Arabidopsis RhizosphereMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDSGMFGGPLSPAQIDDRIDRVT
Ga0182034_1097520723300016371SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDD
Ga0182040_1032151523300016387SoilMVDQSKSSNPDQAPSNRRSRRGMFLLALVAVALLAGITGNLLSTAFGQGASWPHIGWHHGGPFGGPLSAAQIDDRIDR
Ga0182037_1177241313300016404SoilMVEQSNGQSKPEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIE
Ga0182038_1204131413300016445SoilMVEQSNGQSKPEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRI
Ga0066667_1034093313300018433Grasslands SoilMVEQSNGQSKAETPSQDSRRGGRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMSGGPRST
Ga0066667_1178096813300018433Grasslands SoilMVEQSNGKPSQAGQVPSEDQRRGRRGTFLIALVAVALVAGITGNLLSKAFGQGDSWQHISWHDGGVFGGPLSPAQ
Ga0066669_1030051123300018482Grasslands SoilMAEQNNGKSPQADPTPSEDYRRGLRGTFVLALVAVALVAGITGNLLSKAFGQGISWHHISWHEGGFFGGLSPAQID
Ga0210403_1090464113300020580SoilMVEQNNDQSAQADPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQYISWHDGGFLGGLSPAQIDDRIDRMTKHIAIELDATAEQQAKLATIAKAAVADLRPLQEKARA
Ga0126371_1032117133300021560Tropical Forest SoilMVEQNNGKSPQADPTPSEDYHRGLRGTFVLALVAVALVAGITGNLLSKAFGQGISWHHISWNEGGFFGGLSPGQIDDR
Ga0207684_1108121313300025910Corn, Switchgrass And Miscanthus RhizosphereMVEQSNGQSKAETPSQDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEIDA
Ga0207668_1169220313300025972Switchgrass RhizosphereMVEQNNGKSPQADPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQVDDRIDRMTKHIAVELDATAE
Ga0209804_121052823300026335SoilMVEQSNGQSKAETPSQDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMSGGPLSPAQID
Ga0207483_10413523300026750SoilMVEQNNDQSAQADPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQHISWHDGGFLGGLSPAQIDDR
Ga0209729_103300323300027061Forest SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRID
Ga0209523_106514913300027548Forest SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEID
Ga0318561_1065013213300031679SoilMVEQSNGQSKADQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLAIELDATADQQAKVA
Ga0307469_1019940523300031720Hardwood Forest SoilMVEQNNDQSAQADPTPSEDYRRGLRGTFVLALVAVALLAGITGNLLSKAFGQGNSWQYISWHDGGFLGGLSPAQIDDRIDRMTKHIAIELDATA
Ga0318502_1086629213300031747SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQ
Ga0318492_1006596313300031748SoilMVEQSNGQSKPEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSP
Ga0318509_1000615263300031768SoilMVEQSNGQSKPEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEID
Ga0318498_1054300623300031778SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKH
Ga0318529_1003232813300031792SoilMVEQSNGRSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIE
Ga0318497_1042482713300031805SoilMVEQSNGQSKTETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIE
Ga0307473_1094488223300031820Hardwood Forest SoilMVEQSNGQSKAETPSEDHRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGEGWHHIAWHDGGMFGGPLSP
Ga0318499_1033439613300031832SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIE
Ga0306919_1100582923300031879SoilMVDQSKSSNPDQAPSNRRSRRGMFLLALVAVALLAGITGNLLSTAFGQGASWPHIGWHHGGPFGGPLSAAQIDDRIDRMTK
Ga0306923_1042874513300031910SoilMVEQSNGQSKTETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEIDA
Ga0318531_1000290213300031981SoilMVEQSNGQSKADQIPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQSDGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLAIELDATADQQAKVAAIAKAAVA
Ga0318563_1005524033300032009SoilMVEQSNGQSKADQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLS
Ga0318507_1024740513300032025SoilMVEQSNGRSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGG
Ga0310911_1076045913300032035SoilMVEQSNGQSKAEQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAI
Ga0318549_1037821413300032041SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMT
Ga0318556_1026479123300032043SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEIDA
Ga0318514_1042081013300032066SoilMVEQSNGQSKAETPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLS
Ga0318524_1001461613300032067SoilMVEQSNGQSKADQIPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQSDGWHHIHWHDGGMFGGPLSPAQIDDRIDRVTKHLAIELDATADQQAKVAAIAKAAV
Ga0306924_1246013823300032076SoilMVEQSNGQSKADQTPSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHHIHWHDGGMFGGPLSPAQID
Ga0306920_10044773013300032261SoilMVEQSNGQSKAETSSEDYRRGRRGTFVIALVAVALLAGLTGNLLSKAFGQGDGWHRIAWHDGGMFGGPLSPAQIDDRIDRMTKHMAIEID

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.