Metagenome / Metatranscriptome Family F096098

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096098
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	58 residues
Representative Sequence	LPPHPTDAGKPVIYDPPFVAKSDDGRDCAPAFSCRLRLLGVIQNNGAVELRATAFTW
Number of Associated Samples	81
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.31 %
% of genes near scaffold ends (potentially truncated)	85.71 %
% of genes from short scaffolds (< 2000 bps)	82.86 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (60.952 % of family members)
Environment Ontology (ENVO)	Unclassified (64.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.476 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.35% Coil/Unstructured: 77.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00697	PRAI	60.95
PF08534	Redoxin	12.38
PF01425	Amidase	9.52
PF08546	ApbA_C	6.67
PF02558	ApbA	4.76
PF11373	DUF3175	1.90
PF00107	ADH_zinc_N	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	60.95
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	9.52
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	6.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.67 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.29 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.81 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.76 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.81 %
Unclassified	root	N/A	2.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_104531226	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005558\|Ga0066698_10384103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300005764\|Ga0066903_103132130	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006163\|Ga0070715_10736003	Not Available	592	Open in IMG/M
3300010046\|Ga0126384_10011862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5455	Open in IMG/M
3300010359\|Ga0126376_10273834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1451	Open in IMG/M
3300010360\|Ga0126372_10221442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1597	Open in IMG/M
3300010376\|Ga0126381_100217371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2566	Open in IMG/M
3300010376\|Ga0126381_102201798	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300010376\|Ga0126381_103137166	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300010398\|Ga0126383_11826319	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300011120\|Ga0150983_15604693	Not Available	811	Open in IMG/M
3300012096\|Ga0137389_11254171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300012212\|Ga0150985_116481026	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012285\|Ga0137370_10136116	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300012363\|Ga0137390_11527163	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300016294\|Ga0182041_10074767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2398	Open in IMG/M
3300016319\|Ga0182033_10338165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1255	Open in IMG/M
3300016341\|Ga0182035_10130318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1897	Open in IMG/M
3300016387\|Ga0182040_10375845	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300016387\|Ga0182040_10534186	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300016404\|Ga0182037_10095226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2129	Open in IMG/M
3300016445\|Ga0182038_10633003	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300016445\|Ga0182038_11713830	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300017995\|Ga0187816_10458431	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300020580\|Ga0210403_10579181	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300020581\|Ga0210399_10113113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2226	Open in IMG/M
3300021178\|Ga0210408_10091851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2383	Open in IMG/M
3300021404\|Ga0210389_10310064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300021405\|Ga0210387_11276023	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300021406\|Ga0210386_10136101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2044	Open in IMG/M
3300021475\|Ga0210392_10914402	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300021476\|Ga0187846_10025550	All Organisms → cellular organisms → Bacteria → Proteobacteria	2711	Open in IMG/M
3300021476\|Ga0187846_10110962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1176	Open in IMG/M
3300022508\|Ga0222728_1111765	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300022530\|Ga0242658_1125982	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300022533\|Ga0242662_10104077	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300022533\|Ga0242662_10131606	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300022533\|Ga0242662_10327969	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300022726\|Ga0242654_10314162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300027698\|Ga0209446_1054281	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300027875\|Ga0209283_10631028	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031231\|Ga0170824_114766754	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031543\|Ga0318516_10038983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2545	Open in IMG/M
3300031549\|Ga0318571_10080357	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031561\|Ga0318528_10036006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2455	Open in IMG/M
3300031561\|Ga0318528_10174237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1149	Open in IMG/M
3300031561\|Ga0318528_10274839	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031564\|Ga0318573_10330795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300031573\|Ga0310915_10079012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2183	Open in IMG/M
3300031573\|Ga0310915_10150198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1610	Open in IMG/M
3300031640\|Ga0318555_10381063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300031668\|Ga0318542_10112773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1323	Open in IMG/M
3300031668\|Ga0318542_10508101	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031682\|Ga0318560_10258662	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300031719\|Ga0306917_11581954	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031724\|Ga0318500_10036604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2009	Open in IMG/M
3300031724\|Ga0318500_10267331	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031736\|Ga0318501_10362080	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031744\|Ga0306918_10358587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1132	Open in IMG/M
3300031744\|Ga0306918_11160303	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031747\|Ga0318502_10214614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1116	Open in IMG/M
3300031751\|Ga0318494_10066203	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300031751\|Ga0318494_10291049	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031751\|Ga0318494_10494827	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300031763\|Ga0318537_10382881	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300031769\|Ga0318526_10294153	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031770\|Ga0318521_10310138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300031782\|Ga0318552_10158165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1140	Open in IMG/M
3300031782\|Ga0318552_10343411	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031792\|Ga0318529_10089988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300031792\|Ga0318529_10125356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1172	Open in IMG/M
3300031794\|Ga0318503_10195015	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300031797\|Ga0318550_10068885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1624	Open in IMG/M
3300031797\|Ga0318550_10181993	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300031799\|Ga0318565_10258544	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300031819\|Ga0318568_10448541	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031833\|Ga0310917_10507228	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031859\|Ga0318527_10174505	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300031860\|Ga0318495_10552065	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031879\|Ga0306919_10083383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2209	Open in IMG/M
3300031879\|Ga0306919_10488866	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300031879\|Ga0306919_10690217	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031893\|Ga0318536_10324715	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300031893\|Ga0318536_10514094	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031910\|Ga0306923_12226183	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300031942\|Ga0310916_10708507	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300031945\|Ga0310913_10170946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1510	Open in IMG/M
3300031947\|Ga0310909_10399867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300031947\|Ga0310909_10869894	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300032001\|Ga0306922_10110128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2921	Open in IMG/M
3300032044\|Ga0318558_10239153	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300032052\|Ga0318506_10422078	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300032054\|Ga0318570_10369465	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300032055\|Ga0318575_10224447	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300032055\|Ga0318575_10322169	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300032059\|Ga0318533_10040063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3080	Open in IMG/M
3300032063\|Ga0318504_10170478	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300032063\|Ga0318504_10276155	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300032066\|Ga0318514_10252077	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300032076\|Ga0306924_10052471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4505	Open in IMG/M
3300032090\|Ga0318518_10086214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1551	Open in IMG/M
3300032180\|Ga0307471_101374405	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300033289\|Ga0310914_10142193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2108	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.19%
Aquatic	Environmental → Aquatic	2.86%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.29%
Freshwater	Environmental → Aquatic → Freshwater	2.86%
Cave	Environmental → Terrestrial → Cave	1.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.86%
Loam	Environmental → Terrestrial → Soil → Loam	2.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	60.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.90%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1045312261	3300004092	Bog Forest Soil	TDAGKPVIYDPQFVAKSNDETGCAAGLPCRLRLLGVIQNNGAVELRATAFTW*
Ga0066698_103841031	3300005558	Soil	TDAGKPVIFGPGFIAKSDEDKGCAPGFSCRLRLLGVIQNNGAVELRATAFTW*
Ga0066903_1031321302	3300005764	Tropical Forest Soil	DAGKPVIYDPPFVAKSDDDKSCAPGFSCRLRLLGVIQNNGVVELRATAFTW*
Ga0070715_107360031	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	AAQAVSTVDPFGGGPVLLSLPPHPTDAGKPVIYDPQFVVKGDNDSGCAASLPCRLQLLGVIQNNGAVELRAKAFTW*
Ga0126384_100118627	3300010046	Tropical Forest Soil	AGKPVIYGPQYIRKSDEDRGCAPGFSCRLRLLGVIQNNGALELRATAFTW*
Ga0126376_102738341	3300010359	Tropical Forest Soil	QASVPLDLLPHPTDAGKPLIYDPQFAAQADKDLRFGCTPGLQCRLRLLGVIQNNGAVELRTTVHRW*
Ga0126372_102214421	3300010360	Tropical Forest Soil	AALSLPPYPTEAGKPVIYGPQYIRKSDEDRGCAPGFSCRLRLLGVIQNNGALELRATAFTW*
Ga0126381_1002173714	3300010376	Tropical Forest Soil	VGGGAAALSLPPYPTEAGKPVIYGPQYIRKSDEDKGCAPGFSCRLRLLGVIQNNGALELRATAFTW*
Ga0126381_1022017981	3300010376	Tropical Forest Soil	KPVIFGPGFTAKSDEDKGCAPGFSCRLRLLGVIQNNGAIELRATAFTW*
Ga0126381_1031371662	3300010376	Tropical Forest Soil	GGGGPAPLTLPSYPTDAGKPVIFGPSFIAKSDADKGCAPGFSCRLRLLGVIQNNGAVELRATAFTW*
Ga0126383_118263191	3300010398	Tropical Forest Soil	PVIYDPQLAAKSDQHSECAPGFSCRWRLLGVIQNNGAVELKATIFNW*
Ga0150983_156046932	3300011120	Forest Soil	VLLSLPPHPTDAGKPVIYDPQFVAKGNNDSGCAAGLPCRLQLLGVIQNNGAVEL
Ga0137389_112541711	3300012096	Vadose Zone Soil	PAWLSLPRPADSGKAIIYDPQFVVKGEKDIRSGCSPGLQCRLRLLGVIQNNGAVELRATAFTW*
Ga0150985_1164810262	3300012212	Avena Fatua Rhizosphere	SSDLPYPPGAGKPLIFSPGFLTKSDEDKRCAPGFSCRLRLLGVIQNNGAVELRATAFTW*
Ga0137370_101361163	3300012285	Vadose Zone Soil	DAGKPVIFSPGFIAKSDEDKSCAPGFSCRLRLLGVIQNNGAVELRATAFTW*
Ga0137390_115271631	3300012363	Vadose Zone Soil	KPVIYDPQFVAKGDSERGRAPSLPCRLQLLGVIQNNGAVELRAKAFTW*
Ga0182041_100747672	3300016294	Soil	VTLTLPLYPTDAGKPVIYDPLFVAKSDDDQRCAPGFSCRVRLLGVIQNNGVVELRATAFT
Ga0182033_103381653	3300016319	Soil	PVIYDPQFVAKSEDDSGCAVGSPCRLRLFGVIQNNGAVELRATVFTW
Ga0182035_101303181	3300016341	Soil	VTLTLPPYPTDAGKPVIYDPPFVAKSDDDQGCAPGFSCRLRLLGVIQNNGVVELRATAFT
Ga0182040_103758453	3300016387	Soil	LHFAGSSTARRWWKTVTLTLPPYPTDAGKPVIYDPPFVAKSDDDQGCAPGFSCRPRLLGVIQNNGVVELRATAFTW
Ga0182040_105341861	3300016387	Soil	MLALPPHPTDAGKPVIYDQPFASKSDDEKGCAPGFLCRLRLFGVIQNNGAVELRTTAFTW
Ga0182037_100952261	3300016404	Soil	SAGTATLFLPRHPTDAGKPIIYDPQFVAKSDENGGCAPGFSCQLRLFGVIQNNGAVELRATAFTW
Ga0182038_106330033	3300016445	Soil	VTLTLPPHPTDAGKPVIYDPQFAAKSNDERGCALGLSCRLRLLGVIQNNGIVELRA
Ga0182038_117138302	3300016445	Soil	VLPPYPTDTGKPIIYDPQFVAKSGDGKGCAPGFSCRVRLLGVIQNNGVVELRATAFSW
Ga0187816_104584311	3300017995	Freshwater Sediment	AEFLGGPPAPLALPPHPTDTGKPVIYDPQFVAKSDNDRGCSPDFSCRLRLLGVIQNNGAVELRATAFTW
Ga0066655_106487971	3300018431	Grasslands Soil	AAQQLWAPLPHPTDSGKPVIFDPQFAAKAENDRRRGCAPGSQCRLQLLGVIQNNGAVELRATALTW
Ga0210403_105791812	3300020580	Soil	YPTDAGKPVIYDPPFVATSEDSRECAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0210399_101131131	3300020581	Soil	GKPVIYDPPFVAPSEDGRECAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0210408_100918513	3300021178	Soil	VLLSLPPHPTDAGKPVIYDPQFVAKGNNDSGCAAGLPCRLQLLGVIQNNGAVELRAKAFT
Ga0210389_103100643	3300021404	Soil	TGKPVIYDPLFVAKGDNDRGCAPSLPCRLQLLGVVQNNGAVELRAKAFTW
Ga0210387_112760231	3300021405	Soil	VGGGPATVALPPYPTQAGKPVIYDPPFVAKSDDDKGCAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0210386_101361014	3300021406	Soil	VLLTLPPHPTDTGKPVIYDPLFVAKGDNDRGCAPSLPCRLQLLGVVQNNGAVELR
Ga0210392_109144021	3300021475	Soil	ALGGGPVLLTLPPHPTDTGKPVIYDPLFVAKGDNDRGCAPSLPCRLQLLGVVQNNGAVELRAKAFTW
Ga0187846_100255503	3300021476	Biofilm	MLILPSHPTDAGKPIIYDPQFVAKSSDDKGCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0187846_101109621	3300021476	Biofilm	VIYDPQFVAKSNDEKNCAPDFSCRLRLLGVIQNNGVIELRATAFTW
Ga0222728_11117651	3300022508	Soil	VGGGPTIIALPPYPTQAGKPVIYAPPFVAKSDDDKGCAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0242658_11259821	3300022530	Soil	PTDAGKPVIFGPGFIAKSDEDKSCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0242662_101040771	3300022533	Soil	MLVLPPHPTDAGKPVIYDPPFVAPSEDGRECAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0242662_101316062	3300022533	Soil	ILPSFPTDAGKPQIYGSPFIAKSDDDKGCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0242662_103279692	3300022533	Soil	DAGKPLTYGPPFIAKSDEDRSCAPGLSCRLRLLGVVQNNGVVELRATAFTW
Ga0242654_103141621	3300022726	Soil	ETSPGWLSLPRPADSGKAIIYDPQFAAKGEKDSRSGCTPGLQCRLQLLGVIQNNGAVELRATAFTW
Ga0209446_10542813	3300027698	Bog Forest Soil	LTLPPHPTDAGKPVIYDPQFVAKSNDETGCAAGLPCRLRLLGVIQNNGAVELRATAFTW
Ga0209283_106310283	3300027875	Vadose Zone Soil	LTLPLHPTEAGKPLIYDPQFVAKSGDDKAGDDRGCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0170824_1147667541	3300031231	Forest Soil	PPYPTDTGKPVIFGPGFIAKSEEDRSCTPGLSCRLRLFGVIQNNGAVELRATAFTW
Ga0318516_100389832	3300031543	Soil	VTLTLPPHPTDAGKPVIYDPQFAAKSDDERGCALGLSCRLRLLGVIQNNGAVELRARALT
Ga0318571_100803571	3300031549	Soil	PHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0318528_100360064	3300031561	Soil	AGKPLTYDPQFVAKSGDDKACAPGFSCRVRLLGVIQNNGVVELRATAFSW
Ga0318528_101742373	3300031561	Soil	DSGKPLIYDPQFLGKTDSDQRSGCTAGLQCRLRLLGVIQNNGAVELRATAFKW
Ga0318528_102748392	3300031561	Soil	RPVTLTLPPYPTDAGKPVIYDPLFVAKSDDDQRCAPGFSCRVRLLGVIQNNGVVELRATAFTW
Ga0318573_103307952	3300031564	Soil	VTLTLPPYPTDAGKPVIYDPLFVAKSDDDQRCAPGFSCRVRLLGVIQNNGVVELRATAFT
Ga0310915_100790121	3300031573	Soil	GGGPTTLTLPPHPTDAGKPVIYDPQFVTKSEDDSGCAAGRLCRLRLYGVIQNNGAVELRATAFTW
Ga0310915_101501983	3300031573	Soil	LPPHPTDAGKPVIYDPPFVAKSDDGRDCAPAFSCRLRLLGVIQNNGAVELRATAFTW
Ga0318555_103810632	3300031640	Soil	MLTLPPHPTDAGKPVIYDPPFVAKSDDGRDCAPAFSCRLRLLGVIQNNGAVELRATAFTW
Ga0318542_101127731	3300031668	Soil	AGAQQAVGGGPATLALPSYPTDAGKPVIYDPQFAVKSDDEKGCAPGFSCRLRLLGVIQNNGIVELRATAFTW
Ga0318542_105081011	3300031668	Soil	GGSAMLTLPPHPTDAGKPVIYDPPFVAKSDDGRDCAPAFSCRLRLLGVIQNNGAVELRATAFTW
Ga0318560_102586621	3300031682	Soil	TDTGKPVIYDAPFAAKSDDDNDCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0306917_115819542	3300031719	Soil	AQQPVGGEPVTLTLPPHPTDAGKPVIYDPQFAAKSDDERGCALGLSCRLRLLGVIQNNGAVELRARALTW
Ga0318500_100366041	3300031724	Soil	GPTTLTLPPHPTDAGKPVIYDPQFVTKSEDDSGCAAGRLCRLRLYGVIQNNGAVELRATAFTW
Ga0318500_102673311	3300031724	Soil	AGTATLILPRHPTDAGKPIIYDPQFVAKSDENGGCAPGFSCQLRLFGVIQNNGAVELRATAFTW
Ga0318501_103620802	3300031736	Soil	GSNALVLTLPPHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0306918_103585873	3300031744	Soil	HPTDAGKPVIYDPQFVAKSEDDSGCAVGSPCRLRLFGVIQNNGAVELRATVFTW
Ga0306918_111603032	3300031744	Soil	GKPVIYDPLFVAKSDDDQRCAPGFSCRVRLLGVIQNNGVVELRATAFTW
Ga0318502_102146143	3300031747	Soil	LPSYPTDAGKPVIYDPQFAVKSDDEKGCAPGFSCRLRLLGVIQNNGIVELRATAFTW
Ga0318494_100662031	3300031751	Soil	ATLILPRHPTDAGKPIIYDPQFVAKSDENGGCAPGFSCQLRLFGVIQNNGAVELRATAFT
Ga0318494_102910491	3300031751	Soil	GPATLALPTHPTDTGKPLTYDPQFVAESGDDKGCAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0318494_104948271	3300031751	Soil	NAPATLSLPPHPTGAGKPVIYDPQFVAKSEDDSGCAVGSPCRLRLFGVIQNNGAVELRATVFTW
Ga0318537_103828811	3300031763	Soil	KPVIYDPQFVAKSEDDSGCAVGSQCRLRLFGVIQNNGAVELRATAFTW
Ga0318526_102941532	3300031769	Soil	PTTLTLPPHPTDAGKPVIYDPQFVTKSEDDSGCAAGRLCRLRLYGVIQNNGAVELRATAFTW
Ga0318521_103101383	3300031770	Soil	GKPVIYDPQFVAKSEDDSGCAVGSPCRLRLFGVIQNNGAVELRATVFTW
Ga0318552_101581653	3300031782	Soil	KPVIYDPQFVAKSEDDSGCAVGSPCRLRLFGVIQNNGAVELRATVFTW
Ga0318552_103434112	3300031782	Soil	PTHPTDTGKPLTYDPQFVAESGDDKGCAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0318529_100899881	3300031792	Soil	LFLPRHPTDAGKPIIYDPQFVAKSDENGGCAPGFSCQLRLFGVIQNNGAVELRATAFTW
Ga0318529_101253561	3300031792	Soil	APWGFLPYPTDSGKPLIYDPQFLGKTDSDQRSGCTAGLQCRLRLLGVIQNNGAVELRATAFKW
Ga0318503_101950151	3300031794	Soil	LPAVAQQAVGSNALVLTLPPHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0318550_100688851	3300031797	Soil	NALVLTLPPHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0318550_101819931	3300031797	Soil	QSLPPHPTDAGKPVIYDPPFVAKSDDGRDCAPAFSCRLRLLGVIQNNGAVELRATAFTW
Ga0318565_102585442	3300031799	Soil	LPTHPTDTGKPLTYDPQFVAESGDDKGCAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0318568_104485412	3300031819	Soil	TALVLTLPPHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0310917_105072282	3300031833	Soil	TDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0318527_101745052	3300031859	Soil	YPTDSGKPLIYDPQFLGKTDSDQRSGCTAGLQCRLRLLGVIQNNGAVELRATAFKW
Ga0318495_105520652	3300031860	Soil	AMLALPPHPTDAGKPVIYDPPFAAKSDDEKGCAPGFLCRLRLFGVIQNNGAVELRTTAFT
Ga0306919_100833834	3300031879	Soil	YPTDAGKPVIYDPQFAVKSDDEKGCAPGFSCRLRLLGVIQNNGIVELRATAFTW
Ga0306919_104888661	3300031879	Soil	KPLTYDPQFVAESGDDKGCAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0306919_106902172	3300031879	Soil	AVGSNALVLTLPPHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0318536_103247152	3300031893	Soil	MLALPPHPTDAGKPVIYDPPFAAKSDDEKGCAPGFSCRLRLLGVIQNNGAVELRTTAFTW
Ga0318536_105140942	3300031893	Soil	GTATLFLPRHPTDAGKPIIYDPQFVAKSDENGGCAPGFSCQLRLFGVIQNNGAVELRATAFTW
Ga0306923_122261831	3300031910	Soil	ALPPYPTQAGKPLIYDPAFIAKSDDDKGCAPGFSCRLRLLGVIQNNGVVELRATAFTW
Ga0310916_107085071	3300031942	Soil	LPRHPTDAGKPIIYDPQFVAKSDENGGCAPGFSCQLRLFGVIQNNGAVELRATAFTW
Ga0310913_101709462	3300031945	Soil	MLTLPPHPTDAGKPVIYDPPFVAKTDDGRDCAPAFSCRLRLLGVIQNNGAVELRATAFTW
Ga0310909_103998673	3300031947	Soil	LTLPPHPTDAGKPVIYDPQFAAKSDDERGCALGLSCRLRLLGVIQNNGAVELRARALTW
Ga0310909_108698942	3300031947	Soil	PVIYDPLFVAKSDDDQRCAPGFSCRVRLLGVIQNNGVVELRATAFTW
Ga0306922_101101282	3300032001	Soil	VTLTLPPHPTDAGKPVIYDPQFAAKSNDERGCALGLSCRLRLLGVIQNNGAVELRAKAFT
Ga0318558_102391532	3300032044	Soil	NAPVLTLPPHPTDTGKPVIYDAPFAAKSDDDNDCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0318506_104220782	3300032052	Soil	VLTLPPHPTDTGKPVIYDAPFAAKSDDDNDCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0318570_103694651	3300032054	Soil	PVLTLPPHPTDTGKPVIYDAPFAAKSDDDNDCAPGFSCRLRLLGVIQNNGAVELRATAFT
Ga0318575_102244473	3300032055	Soil	PHPTDAGKPVIYDPQFAAKSDDERGCALGLSCRLRLLGVIQNNGAVELRARALTW
Ga0318575_103221692	3300032055	Soil	VGSNALVLTLPPHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0318533_100400632	3300032059	Soil	VTLTLAPYPTDAGKPVIYDPLFVAKSDDDQRCAPGFSCRVRLLGVIQNNGVVELRATAFT
Ga0318504_101704782	3300032063	Soil	AEAQQAAGGGPTTLTLPPHPTDAGKPVIYDPQFVTKSEDDSGCAAGRLCRLRLYGVIQNNGAVELRATAFTW
Ga0318504_102761551	3300032063	Soil	PTDAGKPVIYDPQFVAKSEDDSGCAVGSPCRLRLFGVIQNNVAVELRATVFTW
Ga0318514_102520771	3300032066	Soil	GKPLIYDPQFLGKTDSDQRSGCTAGLQCRLRLLGVIQNNGAVELRATAFKW
Ga0306924_100524715	3300032076	Soil	VTLTLPPYPTDAGKPVIYDPLFVAKSDDDQRCAPGFSCRVRLLGVIQNNGVVELRATA
Ga0318518_100862143	3300032090	Soil	SNALVLTLPPHPTDTGKPVIYDPPFAAKSDDDSDCAPGFSCRLRLLGVIQNNGAVELRATAFTR
Ga0307471_1013744052	3300032180	Hardwood Forest Soil	VVGSNAPLLTLPPHPTDTGKPVIYDPPFAAKSDDDNDCAPGFSCRLRLLGVIQNNGAVELRATAFTW
Ga0310914_101421934	3300033289	Soil	KPVIYDPQFVTKSEDDSGCAAGRLCRLRLYGVIQNNGAVELRATAFTW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096098

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences