Metagenome / Metatranscriptome Family F096099

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	72 residues
Representative Sequence	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Number of Associated Samples	62
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.52 %
% of genes near scaffold ends (potentially truncated)	31.43 %
% of genes from short scaffolds (< 2000 bps)	64.76 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.476 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.191 % of family members)
Environment Ontology (ENVO)	Unclassified (37.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.87% β-sheet: 0.00% Coil/Unstructured: 21.13%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01381	HTH_3	11.43
PF00486	Trans_reg_C	5.71
PF08281	Sigma70_r4_2	4.76
PF00072	Response_reg	3.81
PF01139	RtcB	3.81
PF12704	MacB_PCD	2.86
PF12844	HTH_19	2.86
PF04384	Fe-S_assembly	2.86
PF07676	PD40	1.90
PF02687	FtsX	1.90
PF00891	Methyltransf_2	0.95
PF01384	PHO4	0.95
PF05598	DUF772	0.95
PF00041	fn3	0.95
PF07743	HSCB_C	0.95
PF08818	DUF1801	0.95
PF00012	HSP70	0.95
PF09656	PGPGW	0.95
PF01740	STAS	0.95
PF03404	Mo-co_dimer	0.95
PF00589	Phage_integrase	0.95
PF00144	Beta-lactamase	0.95
PF02803	Thiolase_C	0.95
PF01135	PCMT	0.95
PF07589	PEP-CTERM	0.95
PF00691	OmpA	0.95
PF13649	Methyltransf_25	0.95
PF02518	HATPase_c	0.95
PF12697	Abhydrolase_6	0.95
PF13618	Gluconate_2-dh3	0.95
PF08774	VRR_NUC	0.95
PF04185	Phosphoesterase	0.95
PF12867	DinB_2	0.95
PF16925	TetR_C_13	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	3.81
COG2975	Fe-S-cluster formation regulator IscX/YfhJ	Posttranslational modification, protein turnover, chaperones [O]	2.86
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.95
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.95
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1076	DnaJ domain-containing protein	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.95
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.95
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.95
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.95
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.95
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.95
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.95
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.76 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.95 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.95 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.95 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.95 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10000622	All Organisms → cellular organisms → Bacteria → Acidobacteria	30686	Open in IMG/M
3300001593\|JGI12635J15846_10139461	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300001593\|JGI12635J15846_10257649	Not Available	1115	Open in IMG/M
3300001867\|JGI12627J18819_10394989	Not Available	562	Open in IMG/M
3300002245\|JGIcombinedJ26739_101334348	Not Available	609	Open in IMG/M
3300002245\|JGIcombinedJ26739_101360135	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300003505\|JGIcombinedJ51221_10143867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	961	Open in IMG/M
3300004091\|Ga0062387_100296206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300004092\|Ga0062389_102790113	Not Available	652	Open in IMG/M
3300005434\|Ga0070709_10095766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1967	Open in IMG/M
3300005591\|Ga0070761_10014125	All Organisms → cellular organisms → Bacteria	4460	Open in IMG/M
3300005602\|Ga0070762_10573565	Not Available	747	Open in IMG/M
3300005921\|Ga0070766_10319176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300006052\|Ga0075029_100670924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300006163\|Ga0070715_10728727	Not Available	595	Open in IMG/M
3300006176\|Ga0070765_100310699	Not Available	1459	Open in IMG/M
3300006176\|Ga0070765_100539585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1098	Open in IMG/M
3300006176\|Ga0070765_100600290	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300006893\|Ga0073928_10002652	All Organisms → cellular organisms → Bacteria	30154	Open in IMG/M
3300006893\|Ga0073928_10011112	All Organisms → cellular organisms → Bacteria → Acidobacteria	10557	Open in IMG/M
3300006893\|Ga0073928_10011541	All Organisms → cellular organisms → Bacteria	10289	Open in IMG/M
3300006893\|Ga0073928_10032954	All Organisms → cellular organisms → Bacteria	4937	Open in IMG/M
3300006893\|Ga0073928_10049644	All Organisms → cellular organisms → Bacteria → Acidobacteria	3796	Open in IMG/M
3300006893\|Ga0073928_10111701	Not Available	2270	Open in IMG/M
3300006893\|Ga0073928_10240799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1389	Open in IMG/M
3300009665\|Ga0116135_1280715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300010866\|Ga0126344_1185530	Not Available	564	Open in IMG/M
3300010866\|Ga0126344_1320529	Not Available	864	Open in IMG/M
3300012917\|Ga0137395_10477502	Not Available	897	Open in IMG/M
3300012930\|Ga0137407_10077738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2786	Open in IMG/M
3300014489\|Ga0182018_10000147	All Organisms → cellular organisms → Bacteria	89761	Open in IMG/M
3300014501\|Ga0182024_10004010	All Organisms → cellular organisms → Bacteria	34343	Open in IMG/M
3300014501\|Ga0182024_10026629	All Organisms → cellular organisms → Bacteria	10151	Open in IMG/M
3300014501\|Ga0182024_10043818	All Organisms → cellular organisms → Bacteria	7264	Open in IMG/M
3300020579\|Ga0210407_11456801	Not Available	506	Open in IMG/M
3300020580\|Ga0210403_10140536	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300020580\|Ga0210403_11008319	Not Available	651	Open in IMG/M
3300020583\|Ga0210401_10012740	All Organisms → cellular organisms → Bacteria	8181	Open in IMG/M
3300020583\|Ga0210401_10016281	All Organisms → cellular organisms → Bacteria	7179	Open in IMG/M
3300020583\|Ga0210401_10023956	All Organisms → cellular organisms → Bacteria	5848	Open in IMG/M
3300020583\|Ga0210401_10052723	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3839	Open in IMG/M
3300020583\|Ga0210401_10098783	All Organisms → cellular organisms → Bacteria	2743	Open in IMG/M
3300020583\|Ga0210401_10115914	All Organisms → cellular organisms → Bacteria	2513	Open in IMG/M
3300020583\|Ga0210401_10718495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300020583\|Ga0210401_11454727	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300021046\|Ga0215015_10290254	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300021168\|Ga0210406_10911105	Not Available	661	Open in IMG/M
3300021171\|Ga0210405_10011320	All Organisms → cellular organisms → Bacteria → Acidobacteria	7505	Open in IMG/M
3300021171\|Ga0210405_10013620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6762	Open in IMG/M
3300021171\|Ga0210405_10744421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300021171\|Ga0210405_11154319	Not Available	576	Open in IMG/M
3300021180\|Ga0210396_10376545	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300021180\|Ga0210396_11080299	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300021401\|Ga0210393_11342506	Not Available	572	Open in IMG/M
3300021402\|Ga0210385_11284937	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300021404\|Ga0210389_11279603	Not Available	562	Open in IMG/M
3300021405\|Ga0210387_10791011	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300021406\|Ga0210386_10151033	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300021406\|Ga0210386_11700395	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300021407\|Ga0210383_10536130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300021420\|Ga0210394_10226752	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300021420\|Ga0210394_10427475	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300021432\|Ga0210384_10330107	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300021432\|Ga0210384_11187937	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300021432\|Ga0210384_11379190	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300021474\|Ga0210390_10978256	Not Available	692	Open in IMG/M
3300021477\|Ga0210398_10065701	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300021559\|Ga0210409_10043931	All Organisms → cellular organisms → Bacteria → Acidobacteria	4229	Open in IMG/M
3300021559\|Ga0210409_10256925	Not Available	1581	Open in IMG/M
3300022529\|Ga0242668_1159208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300022530\|Ga0242658_1062945	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300022557\|Ga0212123_10001132	All Organisms → cellular organisms → Bacteria	77302	Open in IMG/M
3300022557\|Ga0212123_10006358	All Organisms → cellular organisms → Bacteria → Acidobacteria	19737	Open in IMG/M
3300022557\|Ga0212123_10029636	All Organisms → cellular organisms → Bacteria	5685	Open in IMG/M
3300022557\|Ga0212123_10035686	All Organisms → cellular organisms → Bacteria → Proteobacteria	4945	Open in IMG/M
3300022557\|Ga0212123_10039259	All Organisms → cellular organisms → Bacteria	4600	Open in IMG/M
3300022717\|Ga0242661_1145843	Not Available	528	Open in IMG/M
3300025320\|Ga0209171_10030639	All Organisms → cellular organisms → Bacteria	3924	Open in IMG/M
3300026490\|Ga0257153_1077811	Not Available	667	Open in IMG/M
3300027370\|Ga0209010_1001125	All Organisms → cellular organisms → Bacteria → Acidobacteria	7028	Open in IMG/M
3300027371\|Ga0209418_1018426	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300027590\|Ga0209116_1102093	Not Available	629	Open in IMG/M
3300027605\|Ga0209329_1005122	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300027676\|Ga0209333_1064498	Not Available	1006	Open in IMG/M
3300027745\|Ga0209908_10060160	Not Available	863	Open in IMG/M
3300027895\|Ga0209624_10108799	Not Available	1814	Open in IMG/M
3300027908\|Ga0209006_10126482	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300028906\|Ga0308309_11353405	Not Available	611	Open in IMG/M
3300031057\|Ga0170834_112116289	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300031128\|Ga0170823_10471344	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300031708\|Ga0310686_109634431	Not Available	1007	Open in IMG/M
3300031715\|Ga0307476_10666809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	771	Open in IMG/M
3300031718\|Ga0307474_10005929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8818	Open in IMG/M
3300031754\|Ga0307475_10099102	Not Available	2272	Open in IMG/M
3300031754\|Ga0307475_10417044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079	Open in IMG/M
3300031962\|Ga0307479_10038003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4612	Open in IMG/M
3300031962\|Ga0307479_10175651	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300031962\|Ga0307479_10249826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1751	Open in IMG/M
3300031962\|Ga0307479_10337783	All Organisms → cellular organisms → Bacteria → Acidobacteria	1489	Open in IMG/M
3300031962\|Ga0307479_10599092	All Organisms → cellular organisms → Bacteria → Acidobacteria	1084	Open in IMG/M
3300031962\|Ga0307479_10749238	Not Available	954	Open in IMG/M
3300031962\|Ga0307479_11744969	Not Available	575	Open in IMG/M
3300032174\|Ga0307470_10726433	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300032180\|Ga0307471_100187727	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300032180\|Ga0307471_104188962	Not Available	509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.81%
Aquatic	Environmental → Aquatic	16.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	12.38%
Freshwater	Environmental → Aquatic → Freshwater	2.86%
Sediment	Environmental → Aquatic → Sediment	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Loam	Environmental → Terrestrial → Soil → Loam	21.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	12.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.00%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	12.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	13.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.33%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	12.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.95%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.95%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100006226	3300001593	Forest Soil	MSINLDTNEIVTQFQLRATAELKRELKEVKWWEDRVRRGLVKREHADRYIQAAKRVIRIKRHALGFPEYPC*
JGI12635J15846_101394614	3300001593	Forest Soil	MSTNLDANDIVRMFQVRATAELRRELDEVKWWEDRVRRGLIKREHAERCIQASKRIIRTKRHILGFPEFPC*
JGI12635J15846_102576492	3300001593	Forest Soil	MSVNLDTNEIVTQFQLRATAELQRELKEVKWLEDRVRRGFVKREHADACIQASKCIIRIKRHILGFPEFPC*
JGI12627J18819_103949891	3300001867	Forest Soil	MNINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFPC*
JGIcombinedJ26739_1013343481	3300002245	Forest Soil	DIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHAEAYIQASKRIIRTKRHVLGFPEFPC*
JGIcombinedJ26739_1013601352	3300002245	Forest Soil	MSTNLDXNDIVRMFQVRATAELRRELDEVKWWEDRVRRGLIKREHAERCIQASKRIIRTKRHILGFPEFPC*
JGIcombinedJ51221_101438672	3300003505	Forest Soil	MRITNLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVKREHVEAYIQASKRIIRTKRHVLGFPEFPC*
Ga0062387_1002962061	3300004091	Bog Forest Soil	RMFQVRATAELKRELDEVKWWEDRVRRGLVRREHAEAYIQASKRIITTKRHVLGFPEFPC
Ga0062389_1027901131	3300004092	Bog Forest Soil	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEGYIQVSKRIIGTKRHVLGFPEFPC*
Ga0070709_100957663	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSTSLDANDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFPC*
Ga0070761_100141252	3300005591	Soil	MSTNLDTNDIVRMFQVRATAELRRELDEVKWWEDRVRRGLIKREHAERCIQASKRIIRTKRHILGFPEFPC*
Ga0070762_105735651	3300005602	Soil	MSIINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVERYIQASKRIIRTKRHVLGCPEFPC*
Ga0070766_103191762	3300005921	Soil	MSIINLDTHDIVRMFQVRGTAELKRELGEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFSEFPC*
Ga0075029_1006709241	3300006052	Watersheds	SRIQEQHQPSDFNIQDAAMSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRGGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC*
Ga0070715_107287272	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	YARVQFEEHQPSDFKLQDGAMSTSLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC*
Ga0070765_1003106991	3300006176	Soil	MSTSLDTNDIEVRAIAELKRELDEVKWWEDRFRRGLVKREHAEVCIQASKRIIRTKRHVLGFREFPC*
Ga0070765_1005395853	3300006176	Soil	IVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAERYIQASKRIIRTKRHVLGFPEFPC*
Ga0070765_1006002902	3300006176	Soil	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC*
Ga0073928_1000265225	3300006893	Iron-Sulfur Acid Spring	MSISLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC*
Ga0073928_1001111216	3300006893	Iron-Sulfur Acid Spring	MSINLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVKREHAERYIQASKRIIRTNRHALGFPEFPC*
Ga0073928_100115415	3300006893	Iron-Sulfur Acid Spring	MSISLDINDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHVEAYIQASKRIIRTKRHVLGFPEFPC*
Ga0073928_100329549	3300006893	Iron-Sulfur Acid Spring	MSINFDTNDIVRMFQVRATAELKRELDEVKWWEDRVCRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC*
Ga0073928_100496443	3300006893	Iron-Sulfur Acid Spring	MSINLDTNDFVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFPC*
Ga0073928_101117012	3300006893	Iron-Sulfur Acid Spring	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQISKRIIRTKRHVLGFPEFPC*
Ga0073928_102407993	3300006893	Iron-Sulfur Acid Spring	MSNVNLDANDIVTMFQVRATAELRRELDEVKWWEDRVRRGFVKRQHAERYIQASKRIIRTKRHILGIPEFPC*
Ga0116135_12807151	3300009665	Peatland	NDIVRMFQVRATAELRRELDEVEWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHILGFPEFPC*
Ga0126344_11855301	3300010866	Boreal Forest Soil	MQEQHQPSDFNLQDAAMSINFDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHAERYIQASKRIIKTKRHVLGFPEFPC*
Ga0126344_13205292	3300010866	Boreal Forest Soil	NLRDAAMSINLDANEFVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHVEGYIQTSKRIIRTKRHVLGFPEFPC*
Ga0137395_104775022	3300012917	Vadose Zone Soil	MRITNLDTDDIVSMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEEYIQASKRIIRTKRHVLGFPEFPC*
Ga0137407_100777383	3300012930	Vadose Zone Soil	MSINLDANDIVRMFQVSATAELKRELDQVKLWEDRVRRALVRREHVEAYIQASKRIIKTKRHVLGFPEFPC*
Ga0182018_1000014781	3300014489	Palsa	MSTNLDTNDIVRMFQIRATAELRRELDEVKWWEDRVRRGLIKREHAEGYIQASKRIIRTKRHILGFPEFPC*
Ga0182024_1000401012	3300014501	Permafrost	MSTNLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVETYIQASKRIIKTKRHVLGFPEFPC*
Ga0182024_100266292	3300014501	Permafrost	MSTNLDTNDIVRMFQVRATAELGRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHILGFPEFPC*
Ga0182024_1004381810	3300014501	Permafrost	MRIINLDTNDILRMFQVRATAELKRELDEDNWWEDRVRRGLVKREHADEYIQASKHIIKTKWHVLGFSEFPC*
Ga0210407_114568011	3300020579	Soil	RPTVPDSAVAFSPPGNFNLQDAPMSIVNLDTNDIVRMFQARATAELKRELDEVRWWEDRVRRGLVKREHVEGYIQASKRIIRTKRHVLGCPEFPC
Ga0210403_101405363	3300020580	Soil	MNINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKHIITTKRHVLGFPEFPC
Ga0210403_110083192	3300020580	Soil	MSISLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210401_100127406	3300020583	Soil	MNINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIITTKRHVLGFPEFPC
Ga0210401_1001628112	3300020583	Soil	MSISLDTNDIVRMFQVRATAELKRKLDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210401_100239565	3300020583	Soil	MSIKFDTNDIVSMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210401_100527233	3300020583	Soil	MSINLDTNDFVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFPC
Ga0210401_100987831	3300020583	Soil	RMFQVRATAELRRELDEVKWWEDRVRRGLVKREHVEAYIQASKHIIRTKRHVLGFPEFPC
Ga0210401_101159144	3300020583	Soil	MSTSLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFPC
Ga0210401_107184952	3300020583	Soil	MRITTLDTDDIVRMFQVRATAELKRELDEVKWWEGRVRRGLVRPEHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210401_114547271	3300020583	Soil	MEGSKIQEQHQRIDFNLQDAAMNINLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVRREHVEAYIQASKRIITTKRHVLGFP
Ga0215015_102902541	3300021046	Soil	ETGLLLIDLNTNDIVRMFQVRATAELTREIDEVKWWEDRVRRGLVRREHVERYIQASKRIIRTKRHVLGFPEFPC
Ga0210406_109111052	3300021168	Soil	MSISLDTNIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210405_100113209	3300021171	Soil	MSISFDTNDIIRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210405_1001362012	3300021171	Soil	MSINLDTNDIVTMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFPC
Ga0210405_107444212	3300021171	Soil	DAAMSISLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210405_111543192	3300021171	Soil	DIVRMFQVRATAELRRELDEVKWWEDRVRRGLVKREHVEAYIQASKHIIRTKRHVLGFPEFPC
Ga0210396_103765451	3300021180	Soil	DATMSIKFDTNDIVSIFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210396_110802992	3300021180	Soil	RITNLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVKREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210393_113425061	3300021401	Soil	MTSDFNLQDATMSIKFDTNDIVSIFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210385_112849372	3300021402	Soil	MSTNLDTNDIVRMFQVRATAELRRELDEVKWWEDRVRRGLIKREHAERCIQASKRIIR
Ga0210389_112796032	3300021404	Soil	MTSDFNLQDATMSIKFDTNDIVSMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210387_107910112	3300021405	Soil	DFNLQDAAMSINLDTNDIVTMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFPC
Ga0210386_101510332	3300021406	Soil	MSIKFDTNDIVSIFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210386_117003951	3300021406	Soil	VTMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPEFP
Ga0210383_105361301	3300021407	Soil	CAVDAAMSINLDTSDIVRMFQVRATAELKRELDEVKWLEDRGRRGLVRREHVEAYIQALKRIIRTQRHVLGFPEFPC
Ga0210394_102267521	3300021420	Soil	MNFNLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210394_104274753	3300021420	Soil	MSISLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFP
Ga0210384_103301071	3300021432	Soil	MSFNLDTNDIVRMFQVRATAELNREIDEVKWWEDRVRRGLVRREHVEGYIQASKRIIRTKRHVLGFPEFPC
Ga0210384_111879371	3300021432	Soil	MNINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210384_113791901	3300021432	Soil	MSISLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRQEHVEAYIQASKRIIRTK
Ga0210390_109782561	3300021474	Soil	MQGSRIEGEHQPSHFNLQDAAMNINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIITTKRHVLGFPEFPC
Ga0210398_100657012	3300021477	Soil	MSTNLDTNDIVRMFQVRATAELRRELDEVKWWEDRVRRGLIKREHAERCIQASKRIIRTKRHILGFPEFPC
Ga0210409_1004393110	3300021559	Soil	MRITNLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVKREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0210409_102569253	3300021559	Soil	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVERYIQASKRIIRTKRHVLGCPEFPC
Ga0242668_11592081	3300022529	Soil	FNLQDATMSIKFDTNDIVSIFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0242658_10629451	3300022530	Soil	MSINLDTNEIVTQFQLRATAELKRKLKEVKWWEDRVRRGLVKREHADRYIQAAKRVIRMKRHILGIPEFPC
Ga0212123_1000113259	3300022557	Iron-Sulfur Acid Spring	MSINLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVKREHAERYIQASKRIIRTNRHALGFPEFPC
Ga0212123_1000635826	3300022557	Iron-Sulfur Acid Spring	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQISKRIIRTKRHVLGFPEFPC
Ga0212123_100296361	3300022557	Iron-Sulfur Acid Spring	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0212123_100356868	3300022557	Iron-Sulfur Acid Spring	MSINFDTNDIVRMFQVRATAELKRELDEVKWWEDRVCRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0212123_100392599	3300022557	Iron-Sulfur Acid Spring	MSISLDINDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0242661_11458432	3300022717	Soil	DATMSIKFDTNDTVSMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0209171_100306391	3300025320	Iron-Sulfur Acid Spring	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRH
Ga0257153_10778112	3300026490	Soil	MSINLDTNDIVRMFQVRATATLKRELDEVKWWEDRVRRGLVKREHAEAYIQASKRIIRTKRHV
Ga0209010_100112512	3300027370	Forest Soil	MSISLDTNEIVKLFQLRATAELKRELDEVKWWEDRVRRGFVKREQADGYIQASKRIIRTKRHILGFPEYPC
Ga0209418_10184261	3300027371	Forest Soil	MSISLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRQEHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0209116_11020931	3300027590	Forest Soil	MSINLDTNEIVTQFQLRATAELKRELKEVKWWEDRVRRGLVKREHADRYIQAAKRVIRI
Ga0209329_10051225	3300027605	Forest Soil	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLGKREHAERYIQASKRIIRTKRHVLGFPEFRC
Ga0209333_10644981	3300027676	Forest Soil	MSINLDTNEIVTQFQLRATAELKRELKEVKWWEDRVRRGLVKREHADRYIQAAKRVIRIKRHALGFPEYPC
Ga0209908_100601602	3300027745	Thawing Permafrost	MSTNLDTNDIVRMFQIRATAELRRELDEVKWWEDRVRRGLIKREHAEGYIQASKRIIRTKRHILGFPEFPC
Ga0209624_101087993	3300027895	Forest Soil	MSTNLDRNDIVRMFQVRATAELRRELDEVKWWEDRVRRGLIKREHAERCIQASKRIIRTKRHILGFPEFPC
Ga0209006_101264822	3300027908	Forest Soil	MSISLDTNDIVRMFQVRATAELKHELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0308309_113534051	3300028906	Soil	KTSFGRIREEHQPSDFKLQDAAMSITNRDTDDIVKMFQVRATAELKREIDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0170834_1121162892	3300031057	Forest Soil	SISLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0170823_104713442	3300031128	Forest Soil	MTSDFNLQDAAMSINLDTNDFVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0310686_1096344312	3300031708	Soil	MSISLLDTNDIEVRAIAELKRELDEVKWWEDRVRRGLVRREHVEAYIHASKRIIRTKRHVLGFPEFPC
Ga0307476_106668092	3300031715	Hardwood Forest Soil	MQWSRIQEQHQPSHFNLQDAAMSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0307474_100059293	3300031718	Hardwood Forest Soil	MSFNLDTNEIVRQFQLRATAEIRRELEQVKWWEDRVRCGLVKREHADGYIQASKRIIRTKRHVLGFPEFPC
Ga0307475_100991021	3300031754	Hardwood Forest Soil	MSINLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVKREHVERYIQASKRIIRTKRHVLGFPEFPC
Ga0307475_104170442	3300031754	Hardwood Forest Soil	QGQHQPSDFNLQDATMSISLDTNDIVRMFQVRATAELKRELDEVTWWENRVRRGLVKREHVEGYIQASKRIIRTKRHVLGCPEFPC
Ga0307479_100380031	3300031962	Hardwood Forest Soil	MSINLDTNDIVRMFQVRATAELKREIDEVKWWEDRVRRGLVKREHVERYIQASKRIIRTKRHVLGFPE
Ga0307479_101756512	3300031962	Hardwood Forest Soil	MSIINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQVSKRIIRTKRHVLGFPEFPC
Ga0307479_102498262	3300031962	Hardwood Forest Soil	MSINLDTNDIVTMFQVRATAELKRELDEVKWWEDRVRRGLVLREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0307479_103377833	3300031962	Hardwood Forest Soil	MSISLDANDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIIRTKRHVLGFPEFPC
Ga0307479_105990923	3300031962	Hardwood Forest Soil	NDIVGMFQVRATAELKREIDEVKWWEDRVRRGLVKREHAEGYIQVSKRIIRTKRHVSSII
Ga0307479_107492381	3300031962	Hardwood Forest Soil	MLGSRIQEQHQPSDFNLQDAAMSINLDANDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVKREHVERYIQASKRIIRTKRHVLGFPEFPC
Ga0307479_117449691	3300031962	Hardwood Forest Soil	MSINLDTNDIVTMFQVRATAELKRELDEVKWWEDRVRRGLVKREHAEGYIQASKRIIRTKRHVLGFPELLC
Ga0307470_107264331	3300032174	Hardwood Forest Soil	PSGASTQQISGLGTTFMSINLDANDIVRMFQIRATAELKRELDEVKWWEDRVRRGLVRREHAEGYIQASKRIIRTKRHVLGFPEFPC
Ga0307471_1001877273	3300032180	Hardwood Forest Soil	MSISLDTNDIVRMFQVRATAELKRELDEVKWWEDGVRGGLVRREHAERYIQISKRIIKTKRHVLGFPEFPC
Ga0307471_1041889621	3300032180	Hardwood Forest Soil	MSINLDTNDIVRMFQVRATAELKRELDEVKWWEDRVRRGLVRREHVEAYIQASKRIITTKRHVLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences