NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096175

Metagenome / Metatranscriptome Family F096175

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096175
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 47 residues
Representative Sequence MAMEKKSLVSKKAAPSTKSNSTKKVDTSKPAASKVVAARGGTGKPGI
Number of Associated Samples 80
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 66.67 %
% of genes near scaffold ends (potentially truncated) 36.19 %
% of genes from short scaffolds (< 2000 bps) 94.29 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (72.381 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(17.143 % of family members)
Environment Ontology (ENVO) Unclassified
(31.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.000 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.13
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02954HTH_8 21.90
PF13437HlyD_3 4.76
PF12697Abhydrolase_6 1.90
PF16640Big_3_5 0.95
PF00135COesterase 0.95
PF00158Sigma54_activat 0.95
PF05163DinB 0.95
PF13533Biotin_lipoyl_2 0.95
PF00561Abhydrolase_1 0.95
PF16576HlyD_D23 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2272Carboxylesterase type BLipid transport and metabolism [I] 0.95
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.38 %
All OrganismsrootAll Organisms27.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10232747Not Available1195Open in IMG/M
3300002245|JGIcombinedJ26739_101424416Not Available586Open in IMG/M
3300004080|Ga0062385_10052967All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300004082|Ga0062384_100194068All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300004082|Ga0062384_100681114Not Available706Open in IMG/M
3300004082|Ga0062384_101195127Not Available552Open in IMG/M
3300004092|Ga0062389_101161369All Organisms → cellular organisms → Bacteria → Acidobacteria958Open in IMG/M
3300004092|Ga0062389_101585756All Organisms → cellular organisms → Bacteria → Acidobacteria837Open in IMG/M
3300004137|Ga0058883_1532605Not Available690Open in IMG/M
3300004631|Ga0058899_11741056Not Available541Open in IMG/M
3300004635|Ga0062388_101012492Not Available808Open in IMG/M
3300005591|Ga0070761_10297909Not Available970Open in IMG/M
3300005602|Ga0070762_10718706Not Available671Open in IMG/M
3300009633|Ga0116129_1091203Not Available889Open in IMG/M
3300009665|Ga0116135_1032178All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1800Open in IMG/M
3300009665|Ga0116135_1073144All Organisms → cellular organisms → Bacteria → Acidobacteria1213Open in IMG/M
3300009787|Ga0116226_10311257All Organisms → cellular organisms → Bacteria → Acidobacteria1621Open in IMG/M
3300010856|Ga0126358_1127337Not Available507Open in IMG/M
3300010858|Ga0126345_1204215Not Available586Open in IMG/M
3300011120|Ga0150983_14785980Not Available507Open in IMG/M
3300011120|Ga0150983_15920109Not Available624Open in IMG/M
3300011120|Ga0150983_16091660Not Available721Open in IMG/M
3300011269|Ga0137392_10703282Not Available837Open in IMG/M
3300012359|Ga0137385_10493747All Organisms → cellular organisms → Bacteria → Acidobacteria1036Open in IMG/M
3300012683|Ga0137398_10185568Not Available1366Open in IMG/M
3300012924|Ga0137413_11575366Not Available536Open in IMG/M
3300013832|Ga0120132_1017086All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300014169|Ga0181531_10081719Not Available1915Open in IMG/M
3300014495|Ga0182015_10168115All Organisms → cellular organisms → Bacteria → Acidobacteria1482Open in IMG/M
3300014501|Ga0182024_10021042All Organisms → cellular organisms → Bacteria11872Open in IMG/M
3300014501|Ga0182024_10893747Not Available1071Open in IMG/M
3300015242|Ga0137412_10011148All Organisms → cellular organisms → Bacteria → Acidobacteria7247Open in IMG/M
3300019260|Ga0181506_1070226Not Available572Open in IMG/M
3300019268|Ga0181514_1185476Not Available893Open in IMG/M
3300019268|Ga0181514_1257927Not Available791Open in IMG/M
3300020583|Ga0210401_10233428Not Available1698Open in IMG/M
3300021086|Ga0179596_10138902All Organisms → cellular organisms → Bacteria → Acidobacteria1146Open in IMG/M
3300021315|Ga0179958_1175783Not Available555Open in IMG/M
3300021404|Ga0210389_11377429Not Available539Open in IMG/M
3300021406|Ga0210386_11141706Not Available660Open in IMG/M
3300021474|Ga0210390_10321483Not Available1311Open in IMG/M
3300022498|Ga0242644_1021124Not Available654Open in IMG/M
3300022498|Ga0242644_1026558All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300022499|Ga0242641_1021811Not Available655Open in IMG/M
3300022502|Ga0242646_1025276Not Available584Open in IMG/M
3300022506|Ga0242648_1022857Not Available815Open in IMG/M
3300022513|Ga0242667_1042504Not Available556Open in IMG/M
3300022523|Ga0242663_1013816Not Available1130Open in IMG/M
3300022527|Ga0242664_1048306Not Available771Open in IMG/M
3300022715|Ga0242678_1021556Not Available789Open in IMG/M
3300022722|Ga0242657_1114245Not Available679Open in IMG/M
3300022722|Ga0242657_1214839Not Available537Open in IMG/M
3300023678|Ga0247538_106614Not Available544Open in IMG/M
3300024288|Ga0179589_10557276Not Available535Open in IMG/M
3300025612|Ga0208691_1078831Not Available743Open in IMG/M
3300025612|Ga0208691_1127801Not Available573Open in IMG/M
3300026557|Ga0179587_10353079All Organisms → cellular organisms → Bacteria → Acidobacteria954Open in IMG/M
3300027609|Ga0209221_1167129Not Available541Open in IMG/M
3300027676|Ga0209333_1087271Not Available853Open in IMG/M
3300027692|Ga0209530_1039485All Organisms → cellular organisms → Bacteria → Acidobacteria1395Open in IMG/M
3300027737|Ga0209038_10091158All Organisms → cellular organisms → Bacteria → Acidobacteria918Open in IMG/M
3300027767|Ga0209655_10069679All Organisms → cellular organisms → Bacteria1170Open in IMG/M
3300027853|Ga0209274_10292634Not Available836Open in IMG/M
3300027855|Ga0209693_10543052Not Available553Open in IMG/M
3300027895|Ga0209624_10015211All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella4909Open in IMG/M
3300027895|Ga0209624_10521408All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300027895|Ga0209624_10913526Not Available572Open in IMG/M
3300027908|Ga0209006_10730596Not Available808Open in IMG/M
3300028746|Ga0302233_10312864Not Available594Open in IMG/M
3300029701|Ga0222748_1114335Not Available538Open in IMG/M
3300029882|Ga0311368_10891447Not Available597Open in IMG/M
3300029944|Ga0311352_10453010All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1043Open in IMG/M
3300029999|Ga0311339_10537542Not Available1179Open in IMG/M
3300029999|Ga0311339_11233606Not Available682Open in IMG/M
3300030007|Ga0311338_11658060Not Available582Open in IMG/M
3300030007|Ga0311338_11870536Not Available538Open in IMG/M
3300030503|Ga0311370_10375937All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1798Open in IMG/M
3300030520|Ga0311372_12118120Not Available652Open in IMG/M
3300030524|Ga0311357_11834634Not Available504Open in IMG/M
3300030602|Ga0210254_10786179Not Available512Open in IMG/M
3300030618|Ga0311354_10944144All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300030618|Ga0311354_11589757Not Available575Open in IMG/M
3300030741|Ga0265459_13926193Not Available522Open in IMG/M
3300031090|Ga0265760_10380855Not Available507Open in IMG/M
3300031231|Ga0170824_126730394Not Available1470Open in IMG/M
3300031231|Ga0170824_128845572Not Available1037Open in IMG/M
3300031233|Ga0302307_10297641All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella825Open in IMG/M
3300031234|Ga0302325_13113355Not Available532Open in IMG/M
3300031236|Ga0302324_103501465Not Available509Open in IMG/M
3300031474|Ga0170818_103960503Not Available835Open in IMG/M
3300031524|Ga0302320_11909987Not Available561Open in IMG/M
3300031708|Ga0310686_100384585Not Available540Open in IMG/M
3300031708|Ga0310686_106959863Not Available539Open in IMG/M
3300031708|Ga0310686_117047762Not Available869Open in IMG/M
3300032028|Ga0316052_111997Not Available562Open in IMG/M
3300032515|Ga0348332_10556533Not Available933Open in IMG/M
3300032515|Ga0348332_11102935Not Available573Open in IMG/M
3300032515|Ga0348332_11735719Not Available652Open in IMG/M
3300032895|Ga0335074_10148991All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella2964Open in IMG/M
3300032895|Ga0335074_10508746Not Available1246Open in IMG/M
3300034124|Ga0370483_0073319All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1105Open in IMG/M
3300034163|Ga0370515_0006233All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5802Open in IMG/M
3300034163|Ga0370515_0006539All Organisms → cellular organisms → Bacteria5642Open in IMG/M
3300034163|Ga0370515_0086169Not Available1360Open in IMG/M
3300034163|Ga0370515_0317986All Organisms → cellular organisms → Bacteria → Acidobacteria658Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.14%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa14.29%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil13.33%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil8.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.71%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland4.76%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil4.76%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.81%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.86%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.86%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter2.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.90%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.90%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.90%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.95%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.95%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.95%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.95%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004137Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300010856Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010858Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019268Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021315Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300022498Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022499Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022502Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023678Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030602Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300032028Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1023274713300001593Forest SoilMAMEKKSLVSKKTATPTKSKSTKSKVDTSKPAASKVVAASGLGHLPKNG*
JGIcombinedJ26739_10142441623300002245Forest SoilMAMEKKSLVSKKASTPKGKSTKSKVDTSKPAASKVVAASGPKHNSPLNG*
Ga0062385_1005296723300004080Bog Forest SoilVAKKSLLSKKTALATKGNSSEKVDTSKPAASKVVSARSVIGKGKF*
Ga0062384_10019406813300004082Bog Forest SoilVAKKSLLSKKTAPATKGNSSKKVDTSKPAASKVVSARSVIGKGKF*
Ga0062384_10068111413300004082Bog Forest SoilMAMEKKSLVSKKAAPSTKSNSTKKVDTSKPAASKVVAARGGKSPESISG*
Ga0062384_10119512713300004082Bog Forest SoilMAMEKKSLGGKKTAPATKSKSTKKVDTSKPAASKVVAARNLGNPGSLSN*
Ga0062389_10116136923300004092Bog Forest SoilMEKKSTVGKKTAPVTKSKSTKKVDTSKPKASKIVAARQQHPTL*
Ga0062389_10158575613300004092Bog Forest SoilMAIEKKSLSKKTAPATKNSTKSKIDTSKPAASKVVAARDWGGKGK*
Ga0058883_153260533300004137Forest SoilTMAMEKKSLVGKKTAAPTKGTSTKSKVDTTKPAASKVVAARNVFQKP*
Ga0058899_1174105613300004631Forest SoilMAMEKKSLVSKKTAAPTKSKSVKSKVDTSKPAATKVVSASNLKNKVGW*
Ga0062388_10101249213300004635Bog Forest SoilMAMEKKSLNSKKTATPAKGKSSKSKVDVRKPAASKVVAALRLPQY*
Ga0070761_1029790933300005591SoilMAMEKKSLVSKKTAPATKGKSSKKVDTSKPAASKVVSARSVAGKGEF*
Ga0070762_1071870613300005602SoilMAMEKKSLVSKKTAPATKGNSSKKADTRKPAASKVVSARSVLGKGKF*
Ga0116129_109120323300009633PeatlandMAMEKKSLVSKKATTPTKSKSTKSKVDTAKPASGKVVAAMKIIHGA*
Ga0116135_103217823300009665PeatlandMEKKSLVSKKATTPTKSKSTKSKVDTAKPASGKVVAAMKIIHGA*
Ga0116135_107314423300009665PeatlandMAIEKKSLAGKKTAPATKNSSKSKVDTSKPTASKVVAARKVVQGT*
Ga0116226_1031125723300009787Host-AssociatedMAIEKKSLAGKKTAPVTKGKTTKKVDTAKPAASKVVAAMSFGGKPGK*
Ga0126358_112733713300010856Boreal Forest SoilKTGEPTMAMEKKSLASKKTAPATKSNTAKSKLDTSKPAASKVVAARNTFQKP*
Ga0126345_120421523300010858Boreal Forest SoilMAMEKKSLASKKTAPATKSNTAKSKLDTSKPAASKVVAARNTFQKP*
Ga0150983_1478598023300011120Forest SoilGEMAMEKKSLAGKKATTTTKSKGKVDTKKPAASKVVAARAPGNHPQGG*
Ga0150983_1592010923300011120Forest SoilQYLEKITMAMEKKSLVGKKTAAPTKGASTKSKVDTTKPAASKVVAARNVFQKP*
Ga0150983_1609166033300011120Forest SoilKTGETKMAMEKKSLASKKTAPATKGNTAKSKLDTSKPAASKVVAARNTFQKP*
Ga0137392_1070328223300011269Vadose Zone SoilMAMEKKSLASKKTAPATKSNTAKSKVDISKPSSGKVVAARTSFQKP*
Ga0137385_1049374713300012359Vadose Zone SoilMAMEKKSLASKKTAPATKSNTAKSKVDTSKPSSGKVVAARTSFQKP*
Ga0137398_1018556833300012683Vadose Zone SoilMEKKSLASKKTAPATKSNTAKSKVDTSKPSAGKVVAARSPFQKG*
Ga0137413_1157536623300012924Vadose Zone SoilMAMEKKSLASKKTAPATKSNTAKSKVDTSKPLAGKVVAARISIQKP*
Ga0120132_101708633300013832PermafrostMAMEKKSLASKKTAPATKSKTAKSKVDTSKPAAGKVVAARATINQ*
Ga0181531_1008171943300014169BogMEKKSLVSKKTAPSTKSNSTKKVDTRKPAASKVVAARAPVQPGFTAKP*
Ga0182015_1016811523300014495PalsaMAMEKKSLVGKKTAPATKSNSTKKVDTSKPAASKVVAARNLGNPGSAGR*
Ga0182024_1002104273300014501PermafrostMEKKSLVGKKTAPATKGKSTKKVDTSKPAASKVVAARNLGNPGGGNPGI*
Ga0182024_1089374723300014501PermafrostMAMEKKSLVSKKTASPTKNKGTKSKVDTSKPAASKVVAASGPKHGPPYTA*
Ga0137412_1001114833300015242Vadose Zone SoilMATEKKSVISKKPAPVSKGNSTKSKIDTSKPAASKVVAARGGPGHIR*
Ga0181506_107022623300019260PeatlandGDTTMEKKSLVGKKTAPATKSNSKSKVDTGKPAASKVVAARGNGGKPGI
Ga0181514_118547633300019268PeatlandMAMEKKSLVGKKTAPVSKSKTAKKLDTTKPAASKVVAARAPGNHPQGG
Ga0181514_125792733300019268PeatlandMEKKSLVSKKTAPSTKSNSTKKVDTRKPAASKVVAARAPVQPGFTAKP
Ga0210401_1023342833300020583SoilMAMEKKSLVSKKTAAPTKSKSVKSKVDTSKPAATKVVSASNLKNKVGW
Ga0179596_1013890223300021086Vadose Zone SoilMAMEKKSLASKKTAPATKSNTAKSKVDTSKPSSGKVVAARTSFQKP
Ga0179958_117578313300021315Vadose Zone SoilNKTGETKMAMEKKSLASKKTAPATKSNTAKSKVDTSKPSAGKVVAARSPFQKG
Ga0210389_1137742913300021404SoilMAMEKKSLVGKKTAPSTKSKSAKSKVDTSKPAASKVVAARGIGKPPYSA
Ga0210386_1114170613300021406SoilMAMKKKSLVSKKTAPATKRNSSKKADTTKPAASKVVSARSMAGKSIF
Ga0210390_1032148323300021474SoilMAMEKKSLVSKKTAPATKGNSSKKADTRKPAASKVVSARSVLGKGKF
Ga0242644_102112423300022498SoilELKMAMEKKSLVGKKTAPSTKSKSAKSKVDTSKPAASKVVAARGIGKPPYSA
Ga0242644_102655813300022498SoilNRRKTTMAMEKKSLVSKKTAAPTKSKSVKSKVDTSKPAATKVVSASNLKNKVGW
Ga0242641_102181113300022499SoilRGELKMAMEKKSLVGKKTAPSTKSKSAKSKVDTSKPAASKVVAARGIGKPPYSA
Ga0242646_102527623300022502SoilMAMEKKSLVKKAEPTTKSNSTKKVDTSKPTASKVVAARKIGNTH
Ga0242648_102285713300022506SoilRKTTMAMEKKSLVSKKTAAPTKSKSVKSKVDTSKPAATKVVSASNLKNKVGW
Ga0242667_104250413300022513SoilKTGDTTMAIEKKSLGGKKSVPATKNSTRSKVDTSKPTASKVVAARPLGGKTYK
Ga0242663_101381613300022523SoilINRGELKMAMEKKSLVGKKTAPSTKSKSAKSKVDTSKPAASKVVAARGIGKPPYSA
Ga0242664_104830633300022527SoilNRGELKMAMEKKSLVGKKTAPSTKSKSAKSKVDTSKPAASKVVAARGIGKPPYSA
Ga0242678_102155633300022715SoilLKMAMEKKSLVGKKTAPSTKSKSAKSKVDTSKPAASKVVAARGIGKPPYSA
Ga0242657_111424523300022722SoilDTTMAMEKKSLVSKKTAPATKGNSSKKADTRKPAASKVVSARSVLGKGKF
Ga0242657_121483923300022722SoilMAIKKKSLVGKKTAPSTKSKSAKSKVDTSKPAASKVVAARGIGKPPYSA
Ga0247538_10661413300023678SoilKMAMEKKAIKKAAPTTKSSSTKSKVDTSKPVASKVVAARKIGNGGL
Ga0179589_1055727613300024288Vadose Zone SoilMATEKKSVISKKPAPVSKGNSTKSKIDTSKPAASKVVAARGGPGHIR
Ga0208691_107883123300025612PeatlandMAIEKKSLAGKKTAPATKNSSKSKVDTSKPTASKVVAARKVVQGT
Ga0208691_112780113300025612PeatlandMAMEKKSLVSKKATTPTKSKSTKSKVDTAKPASGKVVAAMKIIHGA
Ga0179587_1035307913300026557Vadose Zone SoilMAMEKKSLASKKTAPATKSNTAKSKVDTSKPSSGKVVAARTSIQ
Ga0209221_116712913300027609Forest SoilWRIHTMAIEKKSLAGKKTAPATKNSSKSKVDTSKPTASKVVAARKVVQGT
Ga0209333_108727133300027676Forest SoilMAMEKKSLVSKKATTPTKSKSTKSKVDTSKPAASKVVAASGLGHLPKNG
Ga0209530_103948533300027692Forest SoilMEKKSLAGKKTAPATKNSSKSKVDTSKPTASKVVAARKVVQGT
Ga0209038_1009115823300027737Bog Forest SoilMAMEKKSLVSKKAAPSTKSNSTKKVDTSKPAASKVVAARGGTGKPGI
Ga0209655_1006967913300027767Bog Forest SoilVAKKSLLSKKTALATKGNSSEKVDTSKPAASKVVSARSVIGKGKF
Ga0209274_1029263423300027853SoilMAMEKKSLVSKKTAPATKGKSSKKVDTSKPAASKVVSARSVAGKGEF
Ga0209693_1054305213300027855SoilMAMEKKSLVSKKTASPAGKSTKSKVDTSKPSASKVVAAKPFTG
Ga0209624_1001521143300027895Forest SoilMAMEKKSLVSKKASTPKGKSTKSKVDTSKPAASKVVAASGPKHNSPLNG
Ga0209624_1052140813300027895Forest SoilMAMEKKSLAGKKTAPTTKSKSTKSKVDTSKPAASKIVAAKPQLPFKA
Ga0209624_1091352623300027895Forest SoilMAMEKKSLVNKKASTPTKTKSAKSKVDTSKPAASKVVSAFKVPS
Ga0209006_1073059633300027908Forest SoilMAMEKKSIKKAAPTTKSSSTKSKVDTSKPVASKVVAARKIGNGGPA
Ga0302233_1031286423300028746PalsaMAMEKKSLVSKKTATPAGKSTKSKIDTSKPAASKVVAAKGYVPVGP
Ga0222748_111433513300029701SoilMAMEKKSLVSKKTASPTKSKSTKSKVDTSKPEASKVVAAQARKGPWTA
Ga0311368_1089144713300029882PalsaMAMEKKTLNKKAAPTNKSKSAKSKVDTSKPAASKVVAARQIGNGQI
Ga0311352_1045301013300029944PalsaMAIEKKSLAGKKTAPATKNSSKSKVDTSKPTASKVVAARKVVQ
Ga0311339_1053754213300029999PalsaMAMEKKSLVSKRTAPATKGNSGKKADASKPAASKVVSARSVAGNAKF
Ga0311339_1123360623300029999PalsaMAMEKKSLVSKKTAPATKGNSSKKPDTSKPTASKVVSARSVAGKGKF
Ga0311338_1165806023300030007PalsaMAMEKKSLVSKAASTPKSKTTKSKFDTSKPAASKVIAAKKQGTPNSN
Ga0311338_1187053613300030007PalsaMAMEKKSLASKKTAAPTSKSTKSKVDTSKPTASKVVAAKKPGWAT
Ga0311370_1037593723300030503PalsaMAMEKKSLASKKTAAPTSKSTKSKVDTSKPTASKVVAAKKPGWAS
Ga0311372_1211812023300030520PalsaMAMEKKSLASKKTATPTSKSTKSKVDTSKPTASKVVAAKKPGWAS
Ga0311357_1183463423300030524PalsaTTMAMEKKSLASKKTATPTSKSTKSKVDTSKPTASKVVAARKPGWAS
Ga0210254_1078617913300030602SoilEKTTMAMEKKSLVSKKTAAPTKSKSVKSKVDTSKPAAAKVVSAQGIGNKVGWH
Ga0311354_1094414423300030618PalsaMEKKSLASKKTAPVTKSSSKKVDTSKPAASKVVAAKRPSSG
Ga0311354_1158975713300030618PalsaMAMEKKSLVSKRTAPATKGNSGKKADASKPAASKVVSARSVAGNARF
Ga0265459_1392619333300030741SoilLISKKTASPTKSKSTKSKVDTSKPASSKIVAASGPKHSPPFNA
Ga0265760_1038085513300031090SoilANMAMEKKSLVSKKTASPTKSKSTKSKVDTTKPAASKVVAARGSKPLGFNQ
Ga0170824_12673039433300031231Forest SoilMAMEKKSLASKKTAPATKSNTAKSKVDTSKPSAGKVVAARTAFQKG
Ga0170824_12884557213300031231Forest SoilMAMEKKSLASKKTAPATKGNTAKSKLDTSKPAASKVVAARNIFQKP
Ga0302307_1029764133300031233PalsaMEKKTLNKKAAPTNKSKSAKSKVDTSKPAASKVVAARQIGNGQI
Ga0302325_1311335513300031234PalsaMAMEKKSLVGKKTAPATKSKATKSKVDTKKPAASKVVAARNLGNPG
Ga0302324_10350146523300031236PalsaMEKKSLVSKKSSTATKGKTSKSKVDTSKPAASKVVAAYS
Ga0170818_10396050313300031474Forest SoilTGETKMAMEKKSLASKKTAPATKGNTAKSKLDTSKPAASKVVAARNTFQKP
Ga0302320_1190998713300031524BogMAMEKKSLTTKKKVTPTKSKSIKSKVDTSKPAASKVVAAKV
Ga0310686_10038458513300031708SoilMEKKSLVSKKATTPTKSKSTKSKVDTAKPASGKVVAAMKIIHGA
Ga0310686_10695986313300031708SoilMAMEKKSLVGKKAAPATKSKSAKSKLDTTKPAASKVVAARAPGNHPQGG
Ga0310686_11704776213300031708SoilMEKKSLVKKDAPSTKSNSTKKVDVSKPTASKVVAARKIGNTH
Ga0316052_11199723300032028SoilMAMEKKSLAGKKTAPATKGKSTKKVDTSKPAASKVVAARGGPQTNPVG
Ga0348332_1055653333300032515Plant LitterGDTAMEKKSLISKKSAAAKSNSTKSKVDTSKPAASKVVAARPGPPVARP
Ga0348332_1110293523300032515Plant LitterMAMEKKSLVGKKNAPATKSNSTKKVDTSKPAASKVVAARGNFGKPGN
Ga0348332_1173571913300032515Plant LitterMAMEKKAIKKVAPTTKSSSTKSKVDTSKPVASKVVAARKIGNGGL
Ga0335074_1014899113300032895SoilMEKKSLAGKKPATTTKSKGKVDTSKPAASKVVAARAAGNKPQG
Ga0335074_1050874643300032895SoilMEKKSLVSKKTAPASKSKSTKKIDTSKPAASKVVAARSTGTNGTNGGGTI
Ga0370483_0073319_92_2353300034124Untreated Peat SoilMAMEKKSLVGKKNAPATKSNSTKKVDTSKPAASKVVAARGLTSKPGS
Ga0370515_0006233_814_9543300034163Untreated Peat SoilMAIEKKALNKKAAPTTKSNNAKSKVDTSKPVASKVVAARKIGNGQL
Ga0370515_0006539_4751_48883300034163Untreated Peat SoilMARKSPVSKKTAPAAKGNSSKKVDTSKPAASKVVSARSVVGKTKF
Ga0370515_0086169_166_3183300034163Untreated Peat SoilMAIEKKSLVSKKSSTAAKGKTTKSKVDTSKPAASKVVAASGPKHGVIYNA
Ga0370515_0317986_526_6573300034163Untreated Peat SoilMAMEKKSLVSKKTATPSKGKSTKSKVDTSKPAASKVVSAFRGPL


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