Metagenome Family F096519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096519
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	48 residues
Representative Sequence	MTEQAGEVQGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDL
Number of Associated Samples	65
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.31 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.962 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.385 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.808 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 0.00% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF06906	DUF1272	2.88
PF00581	Rhodanese	2.88
PF11706	zf-CGNR	2.88
PF13561	adh_short_C2	1.92
PF04229	GrpB	1.92
PF01494	FAD_binding_3	1.92
PF08241	Methyltransf_11	1.92
PF11066	DUF2867	0.96
PF00704	Glyco_hydro_18	0.96
PF03976	PPK2	0.96
PF03462	PCRF	0.96
PF13527	Acetyltransf_9	0.96
PF00196	GerE	0.96
PF05068	MtlR	0.96
PF00583	Acetyltransf_1	0.96
PF05598	DUF772	0.96
PF11578	DUF3237	0.96
PF16277	DUF4926	0.96
PF08388	GIIM	0.96
PF09335	SNARE_assoc	0.96
PF00248	Aldo_ket_red	0.96
PF13508	Acetyltransf_7	0.96
PF01977	UbiD	0.96
PF07690	MFS_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.85
COG3813	Uncharacterized conserved protein, DUF1272 domain	Function unknown [S]	2.88
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.92
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.92
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.92
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	1.92
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.96
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.96
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.96
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.96
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.96
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.96
COG3722	DNA-binding transcriptional regulator, MltR family	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
All Organisms	root	All Organisms	49.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
cellular organisms	root	All Organisms → cellular organisms	49.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.35 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.54 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.85 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.88 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.65 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.85 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.96 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.92 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.92 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.96 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.96 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.92 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.92 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.96 %
Ornithinimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.88 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	1.92 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.92 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.92 %
Leptolyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya	0.96 %
Ornithinimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium	0.96 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.88 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	1.92 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.92 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.92 %
unclassified Ornithinimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium	0.96 %
unclassified Leptolyngbya	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya	0.96 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.96 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.88 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	1.92 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.92 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.92 %
Ornithinimicrobium sp. F0845	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. F0845	0.96 %
Leptolyngbya sp. FACHB-261	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. FACHB-261	0.96 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1048732	Not Available	760	Open in IMG/M
3300004268\|Ga0066398_10094395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	685	Open in IMG/M
3300004268\|Ga0066398_10223067	Not Available	506	Open in IMG/M
3300004633\|Ga0066395_10277286	Not Available	909	Open in IMG/M
3300005332\|Ga0066388_100933000	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005332\|Ga0066388_101058477	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300005332\|Ga0066388_102117831	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005713\|Ga0066905_100499586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1011	Open in IMG/M
3300005713\|Ga0066905_101976885	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005764\|Ga0066903_100396434	All Organisms → cellular organisms → Bacteria	2267	Open in IMG/M
3300005764\|Ga0066903_102636164	Not Available	974	Open in IMG/M
3300005764\|Ga0066903_104277860	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005764\|Ga0066903_105419008	Not Available	673	Open in IMG/M
3300009088\|Ga0099830_10497897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	994	Open in IMG/M
3300009792\|Ga0126374_10198096	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300009792\|Ga0126374_11437549	Not Available	563	Open in IMG/M
3300010043\|Ga0126380_12143776	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300010046\|Ga0126384_11048150	Not Available	745	Open in IMG/M
3300010046\|Ga0126384_11482996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300010046\|Ga0126384_11575954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	618	Open in IMG/M
3300010046\|Ga0126384_11691359	Not Available	598	Open in IMG/M
3300010047\|Ga0126382_11155686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	690	Open in IMG/M
3300010047\|Ga0126382_11557397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300010048\|Ga0126373_10179641	Not Available	2035	Open in IMG/M
3300010048\|Ga0126373_11249394	Not Available	809	Open in IMG/M
3300010359\|Ga0126376_10354949	Not Available	1301	Open in IMG/M
3300010359\|Ga0126376_10592463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047	Open in IMG/M
3300010359\|Ga0126376_11056246	Not Available	817	Open in IMG/M
3300010359\|Ga0126376_12091721	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300010359\|Ga0126376_12486153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	565	Open in IMG/M
3300010361\|Ga0126378_10329752	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1633	Open in IMG/M
3300010361\|Ga0126378_10706331	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300010361\|Ga0126378_10933432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	973	Open in IMG/M
3300010366\|Ga0126379_10076145	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300010366\|Ga0126379_10356475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1495	Open in IMG/M
3300010366\|Ga0126379_11607200	Not Available	755	Open in IMG/M
3300010376\|Ga0126381_102249512	All Organisms → cellular organisms → Bacteria → Terrabacteria group	784	Open in IMG/M
3300010376\|Ga0126381_103104867	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010398\|Ga0126383_11154782	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300010398\|Ga0126383_13498974	Not Available	513	Open in IMG/M
3300012355\|Ga0137369_10228743	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300012971\|Ga0126369_10349673	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300012971\|Ga0126369_11378972	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300012971\|Ga0126369_12273984	Not Available	629	Open in IMG/M
3300012971\|Ga0126369_12590460	Not Available	592	Open in IMG/M
3300012971\|Ga0126369_13349873	Not Available	525	Open in IMG/M
3300012971\|Ga0126369_13412194	Not Available	520	Open in IMG/M
3300016319\|Ga0182033_10955334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300016319\|Ga0182033_11023349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. FACHB-261	735	Open in IMG/M
3300016357\|Ga0182032_11097236	Not Available	682	Open in IMG/M
3300016357\|Ga0182032_11104051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	680	Open in IMG/M
3300016371\|Ga0182034_11478152	Not Available	595	Open in IMG/M
3300016422\|Ga0182039_10159951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1756	Open in IMG/M
3300018076\|Ga0184609_10329889	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300021560\|Ga0126371_10719650	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300021560\|Ga0126371_13020649	Not Available	570	Open in IMG/M
3300025910\|Ga0207684_10307261	Not Available	1367	Open in IMG/M
3300027835\|Ga0209515_10111830	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300031543\|Ga0318516_10091123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	1712	Open in IMG/M
3300031546\|Ga0318538_10283345	Not Available	892	Open in IMG/M
3300031549\|Ga0318571_10403633	Not Available	534	Open in IMG/M
3300031572\|Ga0318515_10420180	Not Available	715	Open in IMG/M
3300031573\|Ga0310915_11179115	Not Available	530	Open in IMG/M
3300031640\|Ga0318555_10204792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300031668\|Ga0318542_10320542	Not Available	795	Open in IMG/M
3300031681\|Ga0318572_10447981	Not Available	768	Open in IMG/M
3300031713\|Ga0318496_10256165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300031713\|Ga0318496_10300246	Not Available	886	Open in IMG/M
3300031736\|Ga0318501_10332516	Not Available	814	Open in IMG/M
3300031751\|Ga0318494_10420231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300031751\|Ga0318494_10483855	Not Available	721	Open in IMG/M
3300031764\|Ga0318535_10256736	Not Available	782	Open in IMG/M
3300031765\|Ga0318554_10851735	Not Available	509	Open in IMG/M
3300031769\|Ga0318526_10271491	Not Available	694	Open in IMG/M
3300031770\|Ga0318521_10581944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300031771\|Ga0318546_10681246	Not Available	723	Open in IMG/M
3300031777\|Ga0318543_10525858	Not Available	530	Open in IMG/M
3300031781\|Ga0318547_10335790	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300031781\|Ga0318547_10451303	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300031781\|Ga0318547_10948419	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031793\|Ga0318548_10105665	Not Available	1351	Open in IMG/M
3300031798\|Ga0318523_10248117	Not Available	889	Open in IMG/M
3300031798\|Ga0318523_10486969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	611	Open in IMG/M
3300031799\|Ga0318565_10451534	All Organisms → cellular organisms → Bacteria → Terrabacteria group	622	Open in IMG/M
3300031846\|Ga0318512_10434684	Not Available	661	Open in IMG/M
3300031859\|Ga0318527_10303190	Not Available	680	Open in IMG/M
3300031860\|Ga0318495_10047498	Not Available	1897	Open in IMG/M
3300031879\|Ga0306919_10039219	Not Available	3058	Open in IMG/M
3300031880\|Ga0318544_10046836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	1551	Open in IMG/M
3300031894\|Ga0318522_10377973	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031897\|Ga0318520_10253852	Not Available	1050	Open in IMG/M
3300031897\|Ga0318520_10765189	Not Available	605	Open in IMG/M
3300031910\|Ga0306923_12402142	Not Available	523	Open in IMG/M
3300031941\|Ga0310912_10108376	Not Available	2057	Open in IMG/M
3300031959\|Ga0318530_10199132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ornithinimicrobiaceae → Ornithinimicrobium → unclassified Ornithinimicrobium → Ornithinimicrobium sp. F0845	821	Open in IMG/M
3300032001\|Ga0306922_11470080	Not Available	682	Open in IMG/M
3300032043\|Ga0318556_10453046	Not Available	671	Open in IMG/M
3300032065\|Ga0318513_10432562	Not Available	643	Open in IMG/M
3300032066\|Ga0318514_10212195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300032068\|Ga0318553_10345316	Not Available	779	Open in IMG/M
3300032068\|Ga0318553_10373707	Not Available	746	Open in IMG/M
3300032076\|Ga0306924_11732180	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300033290\|Ga0318519_10661445	Not Available	637	Open in IMG/M
3300033290\|Ga0318519_10706052	Not Available	617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.08%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.08%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.58%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	32.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10487322	3300000655	Forest Soil	MTEQAREAQGGGTWEPREAAAEWRRGAAARVQAFGPATEMMLDLVKVA
Ga0066398_100943951	3300004268	Tropical Forest Soil	MTEPASEAQGGGTWGSREAAAEWRRGAAARVQAFGPATEMMLDL
Ga0066398_102230671	3300004268	Tropical Forest Soil	MGTDRPEARSSGTWGSREAAAEWRRGAAARLEALGPATEMMLDLA
Ga0066395_102772861	3300004633	Tropical Forest Soil	MKTMTEQAREAHGGGTWGPCEAAAEWRRGVAARVQAFGPATEMMLDLVK
Ga0066388_1009330002	3300005332	Tropical Forest Soil	MTEQAREAQGGGTWGPREAAAEWRRGAAARVQAFGPATDLMLDLVKLAAGSRVLDVGRAREIPH*
Ga0066388_1010584771	3300005332	Tropical Forest Soil	MTEQAREAHGGGTWGPCEAAAEWRRGVAARVQAFGPATEMMLDLVKVAEGSRVLDVG
Ga0066388_1021178311	3300005332	Tropical Forest Soil	MTEQAREAQGGGTWGPREAAAEWRRGAAARVQAFGPATEMMLDLVKVAEGSRVLDVG
Ga0066905_1004995863	3300005713	Tropical Forest Soil	MTAGQGSGTWGSREAATEWQRGAAARLTALGPATEMMLDLA
Ga0066905_1019768851	3300005713	Tropical Forest Soil	MTEQAREVQGGGTWGTREAAAEWRRGAAARLQAFGRATEMMLDLVNVAEGSWVLDVG
Ga0066903_1003964341	3300005764	Tropical Forest Soil	VTEQGREVQGRGTWGPREAAGEWRRGATARLRAFGPATEMMLDLVK
Ga0066903_1026361641	3300005764	Tropical Forest Soil	MMTEQVPETQAGGTWNSQAAAAEWRRGAAGRAQALGPATEMMLDLAKVDAGS
Ga0066903_1042778601	3300005764	Tropical Forest Soil	MTEQAREAQGGGTWEPREAAAEWRRGAAARVQAFGPATEMMLDLVKVAEGSRVL
Ga0066903_1054190081	3300005764	Tropical Forest Soil	MTEQGGEVHGGGTWGPREAAAEWRRGAAARLQAFGP
Ga0099830_104978972	3300009088	Vadose Zone Soil	MTEQPREAQGGGTWGPREAAAEWRRGAAARVQAFGPATVMMLDLVKVATGSRVLDV
Ga0126374_101980961	3300009792	Tropical Forest Soil	MTEQAREAQGGGTWEPREAAAEWRRGAAARVQAFGPATEMMLDLVKVAEG
Ga0126374_114375491	3300009792	Tropical Forest Soil	MTEQPGEVHGGGTWGPREAAAQWHRGAAARLQAFGPATETMLDL
Ga0126380_121437762	3300010043	Tropical Forest Soil	MMEQAREVQGGGTWGPREAAAEWRRGAAARLQAFGPATEIMLDLAKLAKGSRVLDVGA
Ga0126384_110481502	3300010046	Tropical Forest Soil	MTEQAGEVQGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDL
Ga0126384_114829961	3300010046	Tropical Forest Soil	MKEQAREAQGGGTWGPPEAAAGWRRGAAARVQAFGPATEMMLDLVKVADGSRV
Ga0126384_115759542	3300010046	Tropical Forest Soil	MTEPASEAQGGGTWGSREAAAEWRRGAAARVQAFGPATEMMLDLVKV
Ga0126384_116913591	3300010046	Tropical Forest Soil	MTEQAREAHGGGTWGPCEAAAEWRRGVAARVQAFGPATEMM
Ga0126382_111556861	3300010047	Tropical Forest Soil	MTEPASEAQGGGTWGSREAAAEWRRGAAARVQAFGP
Ga0126382_115573971	3300010047	Tropical Forest Soil	MTEQVREAQGGGTWGPREAAAEWRRGAAARVEAFGPATELMLDLANVEHRTAGVGAGA
Ga0126373_101796411	3300010048	Tropical Forest Soil	MGTDRPEAQGFGTWGSREAATEWQRGAAARLAALGPATEMMLDLAGVKTGSW
Ga0126373_112493941	3300010048	Tropical Forest Soil	MSVQGGGTWGSRDAAAEWRRGAVARLQAFGPATEMMLDLVNVAEGSW
Ga0126376_103549492	3300010359	Tropical Forest Soil	MKTMTEQAREAHGGGTWGPCEAAAEWRRGVAARVQAFGPATEMMLDLVKVAEGSRVLDVG
Ga0126376_105924631	3300010359	Tropical Forest Soil	VTTVTEQGREVQGCGTWGPREAAGEWRRGATARLRAFGPATEMMLDLVKVAEG
Ga0126376_110562462	3300010359	Tropical Forest Soil	MTEQAREAQGGGTWEPREAAAEWRRGAAARVQAFGPATEM
Ga0126376_120917212	3300010359	Tropical Forest Soil	MGTDRPEARSSGTWGSREAAAEWRRGAAARLEALGPATEMMLDLAGVETGSRVPDVGAGPAIPR*
Ga0126376_124861532	3300010359	Tropical Forest Soil	MTEQAREAQGGGTWGPREAAAEWRRGAAARVQAFGPATEMMLDLV
Ga0126378_103297522	3300010361	Tropical Forest Soil	MTEQARDAHGDGTWGPLEAAAEWRRGAAARLQAFGPATEKMLDLVNVAEGSRVLDVG
Ga0126378_107063312	3300010361	Tropical Forest Soil	LKRLSVGVKTMTEPASEAQGGGTWGPREAAAEWRRGAAARVQAFGPATEMMLDLVKVAAG
Ga0126378_109334321	3300010361	Tropical Forest Soil	MTEQGREGHGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDLARVAEGNRVLDVGAGAGDS
Ga0126379_100761452	3300010366	Tropical Forest Soil	MTEQAREVQGGGTWGPREAAAEWRRGAAARLQAFGPATEIMLDLVKVAEGSRVLDVG
Ga0126379_103564752	3300010366	Tropical Forest Soil	MTEQAGDVGGGGTWGSREAAAQWRRGAAARLQAFGP
Ga0126379_116072001	3300010366	Tropical Forest Soil	MTEQARDAHGDGTWGPLEAAAEWRRGAAARLQAFGPATEKML
Ga0126381_1022495122	3300010376	Tropical Forest Soil	MTEQARDAHGDGTWGPQEAAAEWRRGATARLQAFGPATE
Ga0126381_1031048671	3300010376	Tropical Forest Soil	MMEQAHEVQGGGTWGPREAAAEWRRGAAARLQAFGPATEIMLDLVNLAKGSR
Ga0126383_111547821	3300010398	Tropical Forest Soil	MTEQAREAQGGGTWGPREAAAEWRRGAAARVQAFGPATEMMLDLVKVAAGSRVL
Ga0126383_134989742	3300010398	Tropical Forest Soil	MGTDRPKAQGSGTWGSREAAAEWRRGAAARLEAFGPATELMLDLSGVK
Ga0137369_102287433	3300012355	Vadose Zone Soil	MTEQPREAQGGGTWGPREAAAEWRRGAAARVQAFGPATDMMLDL
Ga0126369_103496731	3300012971	Tropical Forest Soil	MTEQAREAQGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDLVKVAEGGRVLDVG
Ga0126369_113789721	3300012971	Tropical Forest Soil	MTEQAREAQGGGTWEPREAAAEWRRGAAARVQAFGPATEMMLDLVKVAEGSRVLD
Ga0126369_122739842	3300012971	Tropical Forest Soil	MTEQGREGHGGGTWGPREAAAEWRRGAAARLQAFGP
Ga0126369_125904602	3300012971	Tropical Forest Soil	MTEQASEAQGGGTGGPREAAAEWRRGAAARVQAFGPATEMMLDLVKVAEGSRVLD
Ga0126369_133498731	3300012971	Tropical Forest Soil	MTEVPETQEGGMWGSREAAAAWRRGAAVRAQVFGPATEMMLDL
Ga0126369_134121941	3300012971	Tropical Forest Soil	MTEQAREVQEGGTWGTREAAAEWRRGAAARLQAFGPATEMMLD
Ga0182033_109553342	3300016319	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLDLVQVAEGD
Ga0182033_110233491	3300016319	Soil	MREQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEVMLDLARVAEGSRVLDVG
Ga0182032_110972361	3300016357	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVR
Ga0182032_111040511	3300016357	Soil	MGAQVPEAQGSGTWGSREAAAEWRRGAAARLAALGPATEMMLDLAGV
Ga0182034_114781521	3300016371	Soil	MTEQARELPEGGTWGPREAAAEWRRGAAARLQAFGP
Ga0182039_101599513	3300016422	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVQAAEGSR
Ga0184609_103298892	3300018076	Groundwater Sediment	MTEQVPETQEGGTWGSREAAAEWRRGAAVRAQALGPATEMMLDLAKVDAGSRV
Ga0126371_107196501	3300021560	Tropical Forest Soil	MTEQAGEGQGGGTWGPREAAAEWRRGAAARLQAFGPATE
Ga0126371_130206491	3300021560	Tropical Forest Soil	MTEQARDAHGDGTWGPQEAAAEWRRGAAARLQAFG
Ga0207684_103072612	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTEQAREAQGGGTWGPREAAAEWRRGAAARVQAFGPA
Ga0209515_101118301	3300027835	Groundwater	MTEQGWEAQGGGTWGPREAAAEWRRGAAVRLRVFGPATEIMLDLAKVDDGSWVLDV
Ga0318516_100911231	3300031543	Soil	MMEQAGEVQAGGMWGPREAAAEWRRGAAARLQAFGP
Ga0318538_102833453	3300031546	Soil	MTGQGGEVRGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLD
Ga0318571_104036331	3300031549	Soil	VTEQGHEVQGGGTWGPREAAGEWRRGATARLRAFGPATEMMLDLVKVAEGSRVLDVG
Ga0318515_104201801	3300031572	Soil	LCPARVTAMTGQGGEVRGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDLAG
Ga0310915_111791151	3300031573	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVRVAE
Ga0318555_102047921	3300031640	Soil	MTEQGGEVQAGGTWGPREAAAEWRRGAAARLRAFGPATEMMLDLVKVAEG
Ga0318542_103205421	3300031668	Soil	MTGQGGEVRGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDLAGVAEGS
Ga0318572_104479811	3300031681	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVRVAEG
Ga0318496_102561651	3300031713	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLDLVRVAEGSRV
Ga0318496_103002461	3300031713	Soil	MTEQAGEVHGGGTWGSREAAAEWRRGAAARLQAFGPATQMMLDLVQVAEGSRVL
Ga0318501_103325163	3300031736	Soil	LCPARVTAMTGQGGEVRGGGTWGPREAAAEWRRGAAARLQAFGPATE
Ga0318494_104202312	3300031751	Soil	MREQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEVMLDLARVAEGSRVLD
Ga0318494_104838552	3300031751	Soil	MTEQAREVQGGGTWGPRDAAAEWRRGAAARLQAFGPATEMMFDLAGVAEGSRV
Ga0318535_102567362	3300031764	Soil	MTEQAREVHGGGIWGSREAAAEWHRGAAARLQAFGPATEIMLVQVAEGSRVLDVGAGAGDST
Ga0318554_108517351	3300031765	Soil	MTEQAGEVQGGGTWGSQEAAAQWRRGAAARLQAFGPATEM
Ga0318526_102714911	3300031769	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVRVAEGSRVL
Ga0318521_105819441	3300031770	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLDLVQ
Ga0318546_106812461	3300031771	Soil	LCPARVTAMTGQGGEVRGGGTWGPREAAAEWRRGAAARLQAFGPAT
Ga0318543_105258581	3300031777	Soil	MTEQAREVRGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLD
Ga0318547_103357902	3300031781	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVRVAEGSRVLDVG
Ga0318547_104513031	3300031781	Soil	MTEQARELPEGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDLVMVAE
Ga0318547_109484191	3300031781	Soil	MTGQGGEVRGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLDLAGVAEGSRV
Ga0318548_101056651	3300031793	Soil	MTEQAGEVQGGGTWGSREAAAQWLRGAAARLQAFGPATERMLDLVR
Ga0318523_102481173	3300031798	Soil	LCPARVTAMTGQGGEVRGGGTWGPREAAAEWRRGAAARLQAFGPATEMM
Ga0318523_104869691	3300031798	Soil	MGAQVPEAQGSGTWGSREAAAEWRRGAAARLAALGPATEMMLDLAGVKTGSRVLD
Ga0318565_104515342	3300031799	Soil	MTEQAGEVQGGGTWGPREAAAEWRRGAAARLQAFGPATEMMLD
Ga0318512_104346841	3300031846	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLGLAQ
Ga0318527_103031902	3300031859	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMML
Ga0318495_100474983	3300031860	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLGLAQVAEGSR
Ga0306919_100392194	3300031879	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLDLANVAEGS
Ga0318544_100468361	3300031880	Soil	MMEQAGEVQAGGMWGPREAAAEWRRGAAARLQAFGPAT
Ga0318522_103779731	3300031894	Soil	MTEQAGEVQGGGTWGSREAAAQWLRGAAARLQAFGPATERMLDLVRVAEGSR
Ga0318520_102538523	3300031897	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLGL
Ga0318520_107651891	3300031897	Soil	MTEQAGEVHGGGTWGSREAAAEWRRGAAARLQAFGPATQMMLDLVQVAEGS
Ga0306923_124021421	3300031910	Soil	MTEQAREVRGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLDLVQVAEGSRV
Ga0310912_101083763	3300031941	Soil	MTEQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEMMLGLAQVAEGSRVLDVGA
Ga0318530_101991321	3300031959	Soil	MTEQAGEVQGGGTWGSREAAAQWLRGAAARLQAFGPATERML
Ga0306922_114700802	3300032001	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVQVAEG
Ga0318556_104530462	3300032043	Soil	MTEQAGEVQGGGTWGSQEAAAQWRRGAAARLQAFGPATEMMLD
Ga0318513_104325621	3300032065	Soil	MTEQAGEVQGGGTWGSREAAAQWRRGAAARLQAFGPATEMMLDLVRV
Ga0318514_102121952	3300032066	Soil	MREQAREVQGGGTWGSREAAAEWRRGAAARLQAFGPATEVMLDLARVAEGSR
Ga0318553_103453162	3300032068	Soil	MTEQAREVHGGGIWGSREAAAEWHRGAAARLQAFGPATEIMLVQVAEGSRVLDVGAGAGD
Ga0318553_103737072	3300032068	Soil	MTEQAGEVHGGGTWGSREAAAEWRRGAAARLQAFGPATQMM
Ga0306924_117321802	3300032076	Soil	MTEQAREVHGGGTWGSREAAAEWRRGAAARLRAFGPATELM
Ga0318519_106614452	3300033290	Soil	LCPARVTAMTGQGGEVRGGGTWGPREAAAEWRRGAAAR
Ga0318519_107060521	3300033290	Soil	MTEQAREVRGGGTWGSREAAAEWRRGAAARLQAFGPATEMML

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences