NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F096944

Metagenome / Metatranscriptome Family F096944

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F096944
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 92 residues
Representative Sequence MNETQRLESLLAGGNGGSVRLPRRDAQELAQKLRVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEARELPSL
Number of Associated Samples 92
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 96.15 %
% of genes from short scaffolds (< 2000 bps) 91.35 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.808 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(19.231 % of family members)
Environment Ontology (ENVO) Unclassified
(36.538 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.923 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.30%    β-sheet: 5.13%    Coil/Unstructured: 49.57%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.59
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF01467CTP_transf_like 50.00
PF03602Cons_hypoth95 13.46
PF00881Nitroreductase 1.92
PF06253MTTB 0.96
PF00271Helicase_C 0.96
PF02645DegV 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG074216S rRNA G966 N2-methylase RsmDTranslation, ribosomal structure and biogenesis [J] 13.46
COG109223S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmITranslation, ribosomal structure and biogenesis [J] 13.46
COG2242Precorrin-6B methylase 2Coenzyme transport and metabolism [H] 13.46
COG2265tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD familyTranslation, ribosomal structure and biogenesis [J] 13.46
COG2890Methylase of polypeptide chain release factorsTranslation, ribosomal structure and biogenesis [J] 13.46
COG5598Trimethylamine:corrinoid methyltransferaseCoenzyme transport and metabolism [H] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.81 %
All OrganismsrootAll Organisms45.19 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001305|C688J14111_10203470Not Available615Open in IMG/M
3300001686|C688J18823_10943739Not Available547Open in IMG/M
3300002568|C688J35102_120243605All Organisms → cellular organisms → Bacteria945Open in IMG/M
3300004081|Ga0063454_101032407All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300004153|Ga0063455_100722236Not Available675Open in IMG/M
3300005167|Ga0066672_10524610All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300005178|Ga0066688_10734507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria624Open in IMG/M
3300005181|Ga0066678_10046013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2463Open in IMG/M
3300005181|Ga0066678_10229933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1193Open in IMG/M
3300005187|Ga0066675_11356035All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005328|Ga0070676_11431531All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005332|Ga0066388_100557002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1775Open in IMG/M
3300005406|Ga0070703_10028283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1675Open in IMG/M
3300005437|Ga0070710_11306694All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005438|Ga0070701_11046692All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005536|Ga0070697_100590301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria976Open in IMG/M
3300005536|Ga0070697_100870516All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300005540|Ga0066697_10158590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1338Open in IMG/M
3300005556|Ga0066707_10746929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300005558|Ga0066698_11051847Not Available516Open in IMG/M
3300005561|Ga0066699_10418035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria960Open in IMG/M
3300005568|Ga0066703_10504287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria718Open in IMG/M
3300005569|Ga0066705_10630716All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300005576|Ga0066708_10433648All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300005578|Ga0068854_101733049All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300005598|Ga0066706_11049061Not Available626Open in IMG/M
3300005764|Ga0066903_102369161All Organisms → cellular organisms → Bacteria1026Open in IMG/M
3300005764|Ga0066903_104843927Not Available715Open in IMG/M
3300006046|Ga0066652_100946823All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300006797|Ga0066659_11641074All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300009012|Ga0066710_101146674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1203Open in IMG/M
3300009098|Ga0105245_11346027Not Available763Open in IMG/M
3300009137|Ga0066709_102627599Not Available674Open in IMG/M
3300009148|Ga0105243_10607812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1054Open in IMG/M
3300010123|Ga0127479_1046198Not Available651Open in IMG/M
3300010304|Ga0134088_10149672Not Available1110Open in IMG/M
3300010396|Ga0134126_10964212Not Available956Open in IMG/M
3300012198|Ga0137364_10604240Not Available827Open in IMG/M
3300012200|Ga0137382_10493522Not Available869Open in IMG/M
3300012285|Ga0137370_10060414All Organisms → cellular organisms → Bacteria2055Open in IMG/M
3300012354|Ga0137366_10479851Not Available899Open in IMG/M
3300012357|Ga0137384_11341850Not Available562Open in IMG/M
3300012359|Ga0137385_10391873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1185Open in IMG/M
3300012389|Ga0134040_1033539Not Available696Open in IMG/M
3300012403|Ga0134049_1174702Not Available705Open in IMG/M
3300012683|Ga0137398_10562061Not Available787Open in IMG/M
3300012957|Ga0164303_10294374Not Available954Open in IMG/M
3300012960|Ga0164301_10887465Not Available691Open in IMG/M
3300012960|Ga0164301_11165435Not Available617Open in IMG/M
3300012977|Ga0134087_10142578Not Available1036Open in IMG/M
3300012977|Ga0134087_10732550Not Available528Open in IMG/M
3300012985|Ga0164308_12232657Not Available509Open in IMG/M
3300012986|Ga0164304_10065107Not Available2047Open in IMG/M
3300013307|Ga0157372_10604052All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300013307|Ga0157372_13275767Not Available516Open in IMG/M
3300014154|Ga0134075_10443475Not Available577Open in IMG/M
3300014157|Ga0134078_10380236Not Available629Open in IMG/M
3300014969|Ga0157376_10364029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1388Open in IMG/M
3300015053|Ga0137405_1239329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1379Open in IMG/M
3300015053|Ga0137405_1239330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1379Open in IMG/M
3300015372|Ga0132256_102280491Not Available645Open in IMG/M
3300018027|Ga0184605_10027029All Organisms → cellular organisms → Bacteria2343Open in IMG/M
3300018071|Ga0184618_10072791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1299Open in IMG/M
3300018071|Ga0184618_10158065Not Available930Open in IMG/M
3300018482|Ga0066669_11305776Not Available656Open in IMG/M
3300019361|Ga0173482_10503677Not Available588Open in IMG/M
3300019890|Ga0193728_1047385All Organisms → cellular organisms → Bacteria2096Open in IMG/M
3300021080|Ga0210382_10159319Not Available970Open in IMG/M
3300021413|Ga0193750_1009200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2520Open in IMG/M
3300021418|Ga0193695_1107668Not Available592Open in IMG/M
3300021510|Ga0222621_1059373Not Available804Open in IMG/M
3300021510|Ga0222621_1089665Not Available651Open in IMG/M
3300024347|Ga0179591_1087570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2172Open in IMG/M
3300025898|Ga0207692_10219730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1126Open in IMG/M
3300025901|Ga0207688_10075971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1913Open in IMG/M
3300025905|Ga0207685_10597832Not Available592Open in IMG/M
3300025907|Ga0207645_10762099Not Available658Open in IMG/M
3300025938|Ga0207704_11291912Not Available624Open in IMG/M
3300025938|Ga0207704_11779473Not Available530Open in IMG/M
3300025960|Ga0207651_10141378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1860Open in IMG/M
3300025961|Ga0207712_10939199Not Available766Open in IMG/M
3300026295|Ga0209234_1206836Not Available661Open in IMG/M
3300026310|Ga0209239_1328886Not Available532Open in IMG/M
3300026342|Ga0209057_1082638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1354Open in IMG/M
3300026547|Ga0209156_10198656Not Available956Open in IMG/M
3300026548|Ga0209161_10139719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1411Open in IMG/M
3300026550|Ga0209474_10754986Not Available507Open in IMG/M
3300026552|Ga0209577_10632066Not Available626Open in IMG/M
3300027725|Ga0209178_1190530Not Available723Open in IMG/M
3300028771|Ga0307320_10279339Not Available661Open in IMG/M
3300028790|Ga0307283_10080650Not Available824Open in IMG/M
3300028793|Ga0307299_10005466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia4406Open in IMG/M
3300028796|Ga0307287_10011145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia3014Open in IMG/M
3300028881|Ga0307277_10083807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1337Open in IMG/M
3300030993|Ga0308190_1049666Not Available805Open in IMG/M
3300031720|Ga0307469_10980569Not Available788Open in IMG/M
3300031720|Ga0307469_11101577Not Available746Open in IMG/M
3300031908|Ga0310900_10365013Not Available1085Open in IMG/M
3300031996|Ga0308176_11770882Not Available659Open in IMG/M
3300032179|Ga0310889_10704830Not Available527Open in IMG/M
3300033475|Ga0310811_10472003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1330Open in IMG/M
3300033475|Ga0310811_11460550Not Available515Open in IMG/M
3300033550|Ga0247829_10670100Not Available863Open in IMG/M
3300034268|Ga0372943_0082459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1859Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil19.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.35%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.92%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.96%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300010123Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012389Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_1020347023300001305SoilMTDTQRLESLLAEGRGGTVTLPRKDAQELVQKLKARGEPEAARSLVEKLDTPGDVSIPPDEAAGLLEQLRASGRRWVFGTN
C688J18823_1094373913300001686SoilMTDTQRIESLLAAGKGGAVTLPRKDAQELAQKLKARGEXEAAASLAQRLDAPGDVSIPPDXAAGLLEQLRASGRRWV
C688J35102_12024360523300002568SoilMTDTQRLESLLAEGRGGTVTLPRKDAQELVQKLKARGEPEAARSLVEKLDTPGDVSIPPDEAAGLLEQLRASGRRWVFGTNEARELSAMKAPEPEPEPEPEHQPGFFSRWFGKGDQ*
Ga0063454_10103240713300004081SoilMTDTQRLESLLAEGRGGTVTLPRKDAQELVQKLKARGEPEAARSLVEKLDTPGDVSIPPDEAAGLLEQLRASGRRWVFGTNEARELSAMKAPEPEPEPEPEHQPGFFSRWFG
Ga0063455_10072223613300004153SoilMTETHRLESILAGGNGGSVTLVRKDARELAQKLRARGEPEAAAILAHKLDAPGDVSLEPDEAQSLLEQLRESGRR
Ga0066672_1052461023300005167SoilMNETQRLETLLGAGNGGSVRLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLDPEEAKTLLDQLRESGRRWVFGTNEPRELPSMQAAEAEPEPERQPEAEPQSEA
Ga0066688_1073450723300005178SoilMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLRVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEAKELPSLKPPELEPEPASES
Ga0066678_1004601313300005181SoilMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLRVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFG
Ga0066678_1022993313300005181SoilMNDTQKLESLLAAGNGGSVTLGRKDARELAQKLKARGEAGAAAKLAHKLDTPGDVSLEPEEAQSLLEQLRASGRRWVFGSNEARELPSMKAPAPGPEPEPEPE
Ga0066675_1135603513300005187SoilMNETQRLESLLDAGNGGSVTLPRKDAVELAQKLRVRGNPAAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEARE
Ga0070676_1143153123300005328Miscanthus RhizosphereMNETQRLEGLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTNEARELPSLKPPESE
Ga0066388_10055700243300005332Tropical Forest SoilMTETQRLENLLAGGEGGSVTLPRQEARELAQKLKARGEAEAAATLSEKLDAPGDVSLAPEEAQSLLERLRASGRRWVFGTNE
Ga0070703_1002828343300005406Corn, Switchgrass And Miscanthus RhizosphereMNETQRLENLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGSAEARELSTTRAPEPESSPE
Ga0070710_1130669423300005437Corn, Switchgrass And Miscanthus RhizosphereMNETQRLESLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGS
Ga0070701_1104669213300005438Corn, Switchgrass And Miscanthus RhizosphereMNETQRLESLLEGGNGGNVTLPRRDAAELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTTEARELPSLKPPESESAPEPEPEA
Ga0070697_10059030133300005536Corn, Switchgrass And Miscanthus RhizosphereMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVELEPDEARTLLEQLRASGRSWVFGSNEA
Ga0070697_10087051623300005536Corn, Switchgrass And Miscanthus RhizosphereMNETQRLEGLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTTEARELPSLKPPESESAPEPEPE
Ga0066697_1015859013300005540SoilMNDTQKLESLLAAGNGGSVTLGRKDARELAQKLKARGEAGAAAKLAHKLDTPGDVSLEPEEAQSLLEQLRASGRRWVFGSNEAR
Ga0066707_1074692913300005556SoilMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLRVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEAKELPSLKPPE
Ga0066698_1105184723300005558SoilMNDTQKLESLLAAGNGGSVTLGRKDARELAQKLKARGEAGAAAKLAHKLDTPGDVSLEPEEAQSLLEQLRASGRRWVFGSNEARELPSMK
Ga0066699_1041803513300005561SoilMNETQRLETLLGAGNGGSVRLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLDPEEAKTLLDQLRESGRRWVFGTNEPRELQSMKAAEPEPEPEPEPE
Ga0066703_1050428723300005568SoilMNETQRLETLLGAGNGGSVRLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLDPEEAKTLLDQLRESGRRWVFGTNEPRELPSMKAAEAEPEPEPE
Ga0066705_1063071613300005569SoilMNETQRLEKLLAGDNGGSVTLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLNAEEAKSLLEQLRESGRRWVFGSNEA
Ga0066708_1043364823300005576SoilMNETQRLETLLGAGNGGSVRLPRRDAQELAQKLKVRGNPGAAARLLELLNSPGDVDLDPEEAKTLLDQLRESGRRWVFGTNEPRELPSMQ
Ga0068854_10173304913300005578Corn RhizosphereMNETQRLEGLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTTEARELPSLKPPELEAAPEPEPEA
Ga0066706_1104906123300005598SoilMNETQRLESLLAGGNGGSVTLSRKDAHELAQKLKVRGNPGAAARLVELLNSPGDVHLDPEEANDLLEQLRESGRR
Ga0066903_10236916113300005764Tropical Forest SoilMTETQRLESLLAGGEGGSVTLPRQDARELAQKLKARGEADAAASLSEKLDAPGDVSLAPDEARSLLEHLRASGRRWVFGTNEGRELTTFK
Ga0066903_10484392713300005764Tropical Forest SoilMTETQRLESLLAGGEGGSVTLPRQDARELAQKLKARGEADAAASLSEKLDVPGDVSLAPDEARSLLEHLRASGRRWVFGTNEGRELTTFK
Ga0066652_10094682313300006046SoilMNETQRLETLLGAGNGGSVRLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLDPEEAKTLLDQLRESGRRWVFGTDEPRELPSMQAAEAEPELEPEPQPQSEAE
Ga0066659_1164107423300006797SoilMNETQRLEGLLDAGNGGSVTLPRRDALELAQKLKVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEARELPSLKPAEPEPEPQPE
Ga0066710_10114667433300009012Grasslands SoilMTETQRLESLLAGGNGGSITLARKDARELSQKLKARGEPGAAAILVHKLDSPGDVSLAPEEAQSLLEQLRASGRRWVFG
Ga0105245_1134602723300009098Miscanthus RhizosphereMNETQRLEGLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFG
Ga0066709_10262759913300009137Grasslands SoilMTETQRLESLLAGGNGGSITLARKDARELSQKLKARGEPGAAAILVHKLDSPGDVSLAPEEAQSLLEQLRASGRR
Ga0105243_1060781233300009148Miscanthus RhizosphereMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVELEPDQARTLLEQLRASG
Ga0127479_104619813300010123Grasslands SoilMNETQRLESLLAGGNGGSVTLSRKDAHELAQKLKVRGNPGAAARLVELLNSPGDVHLDPEEANDLLEQLRESGRRWVFGTNEARELASMKVPAEPELEAEPEPEPEP
Ga0134088_1014967213300010304Grasslands SoilMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLRVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEARELPSL
Ga0134126_1096421213300010396Terrestrial SoilMNETQRLEGLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTTEARELPSLKPPELEAAPEPEPE
Ga0137364_1060424023300012198Vadose Zone SoilMTETHRLESILAGGNGGSVTLVRKDARELAQKLRARGEPEAAAILAHKLDVPGDVSLEPDEAQSLLEQLRESGRRWVFGSKDARELPSL
Ga0137382_1049352213300012200Vadose Zone SoilMNETQRLESLLAGGNGGSVKLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVDLEPDEARTLLEQLRSSGRSWVFGSNEARELALKAPEAEPQPEPKAEL
Ga0137370_1006041443300012285Vadose Zone SoilMTETHRLETILAGGNGGSVTLVRKDARELAQKLRARGEPEAAAILAHKLDVPGDVSLEPDEAQSLLEQLRESGRRWVFGSKDARELPSLGTPQREPEA
Ga0137366_1047985123300012354Vadose Zone SoilMNETQRLESLLEGGNGGSVTLPRKDALELVQKLKVRGNPGAAARLVDLLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEARELPSLKPPESESAPEP
Ga0137384_1134185013300012357Vadose Zone SoilMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVDLNADEARTLLEQLRSSGRRWVFGRDEAKELALKAPEAEPQPEPEPEQQPELELQPEP
Ga0137385_1039187313300012359Vadose Zone SoilMNETQRLESLLDAGNGGSVTLPRRDALELAQKLKVRGNPGAAARLVELLNSPGDVDLNPEEAKTLLEQLRESGRRWVFG
Ga0134040_103353923300012389Grasslands SoilMNETQRLESLLAGGNGGSVTLSRKDAHELAQKLKVRGNPGAAARLVELLNSPGDVHLDPEEANDLLEQLRESGRRWVFGTNE
Ga0134049_117470213300012403Grasslands SoilMNETQRLEGLLDAGNGGSVTLPRRDALELAQKLKVRGNPAAAARLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTNEARELASLKPPESESAPQPEP
Ga0137398_1056206113300012683Vadose Zone SoilMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPAAAAMLHERLNSPGDVELNPDEARTLLEQLRSSGRRWVFGGDEARELALKA
Ga0164303_1029437423300012957SoilMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVELEPDEARTLLEQLRASGRSWVFGSNEARELALKPPEAEAQPEPAPQQPE
Ga0164301_1088746523300012960SoilMTDTQRLETLLAAGTGDAVTLPRRDAQELAQKLKARGEAAAAAGLVEKLHTPGDVRLESAEAQGLLEQLRESG
Ga0164301_1116543513300012960SoilMNETQRLESLLEGGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTNEARELPSLKPPESEFAPEPEPEAQP
Ga0134087_1014257823300012977Grasslands SoilMNDTQKLESLLAAGNGGSVTLGRKDARELAQKLKARGEAGAAAKLAHKLDTPGDVSLEPEEAQSLLEQLRASGRRARRRRG*
Ga0134087_1073255023300012977Grasslands SoilMNETQRLETLLGAGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLDPEEAKTLLDQLRESGRRWVFGTDEPRELPSMQAAEAEPELEPEPQPQSE
Ga0164308_1223265723300012985SoilMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVELKPDEAKTLLEQLRASGRSWVFGSNEARELALKPPEA
Ga0164304_1006510753300012986SoilMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVELEPDEARTLLEQLRASGRSWVFGSNEARELALKPPEAEAQPEPAPQ
Ga0157372_1060405233300013307Corn RhizosphereMNETQRLESLLEGGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGYVDLNPEEAKSLLEQLRESGRRWVFG
Ga0157372_1327576713300013307Corn RhizosphereMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGSAEARELSMTRAPEPES
Ga0134075_1044347513300014154Grasslands SoilMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLRVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRES
Ga0134078_1038023623300014157Grasslands SoilMTETQRLESLLAGGEGGSVTLPRQDARELAQKLKARGEADAAAALAEKLDAPGDVSLAPEEAKSLLERLRASGRRWVFG
Ga0157376_1036402913300014969Miscanthus RhizosphereMNETQRLENLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAQSLLEQLRESGRAWVFGSAEARELSTTRAPEPESSPEPEPEPE
Ga0137405_123932913300015053Vadose Zone SoilMNETQRLEGLLDAGNGGSVTLPRTDALELAQKLKVRGNPGAAARLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTNEARELPSLKPPESE
Ga0137405_123933033300015053Vadose Zone SoilMNETQRLEGLLDAGNGGSVTLPRTDALELAQKLKVRGNPGAAARLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTNEARELPSLKPPQSE
Ga0132256_10228049113300015372Arabidopsis RhizosphereMNETERLESLLAGGTGESVTLPRGDAQELAQKLKVRGNPGAAARLMERLSSPGDVDLAAEEAKSLLEQLRESGRAWVFGSTEARDLPSLKASEPEPAPESERLEPATEPVLPPAPELEAE
Ga0184605_1002702933300018027Groundwater SedimentMTDSQQLESLLAGGNGGSVTIPRKQAQELAQKLKARGDAGAGAARLHELLSRPGDVSVNSDEAKALLEELRASGRSWVFGTNEARELPSLKAPEPEPEPEPESEPQKKQGFLARFFAPRD
Ga0184618_1007279133300018071Groundwater SedimentMNETQRLESLLAGGNSVNVTLSRTDAHELAQKLKTRGNPAAAARLVELLGSPGDVNLKPDEAQTLLEQLRASGRSWVFGTNEARELSTLKPPEPE
Ga0184618_1015806533300018071Groundwater SedimentMNETQRLESLLEGGNGGSVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTT
Ga0066669_1130577613300018482Grasslands SoilMTETQRLESLLAGGEGGSVTLPRQDARELAQKLKARGEADAAAALAEKLDAPGDVSLAPDEAKSLLERLRASGRRWVFGTNEGRPMPS
Ga0173482_1050367713300019361SoilMNETQRLESLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWV
Ga0193728_104738513300019890SoilMNETQRLESLLAGGNSVNVTLSRTDAHELAQKLKTRGNPGAAARLVELLGSPGDVNLKPDEAQTLLEQLRASGRSWVFGTNEARELSTLKPPEPEPEPEPEL
Ga0210382_1015931933300021080Groundwater SedimentMNETQRLESLLEGGNGGSVTLPRRDALELAQKLKVRGNPGAAARLVELLNSPGDVDLNAEEAKSLLEQLRESGR
Ga0193750_100920013300021413SoilMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVDLKPEEARTLLEQLRASGRSWVFGSNEAR
Ga0193695_110766823300021418SoilMNETQRLESLLAAGNGGSVTLVRKDARELVQKLRARGEAGAAARLAHKLDTPGDVSLEPEEAESLLEQLRESGRRWVFGSNEARELPSMKAAGPVPEPEPE
Ga0222621_105937323300021510Groundwater SedimentMNETQRLESLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRR
Ga0222621_108966513300021510Groundwater SedimentMTDTQRLENLLAGGRGGAVTLPRKDAQELAQKLKARGEPEAAATLAEKLVTPGDVSIEPEEAAGLLEQLRASGRRWV
Ga0179591_108757043300024347Vadose Zone SoilMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLKVRGNPAAAAMLHERLNSPGDVELNPDEARTLLEQLRSSGR
Ga0207692_1021973033300025898Corn, Switchgrass And Miscanthus RhizosphereMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVELEPDEARTLLEQLRASGRSWVFGSNEARELALKPPEAEPQPE
Ga0207688_1007597113300025901Corn, Switchgrass And Miscanthus RhizosphereMNETQRLESLLDAGNGGSVTLPRKDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTTEARELPSLKPPESESAPEPEP
Ga0207685_1059783213300025905Corn, Switchgrass And Miscanthus RhizosphereMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLVERLNSPGDVELEPDEARTLLEQLRASGRSWVFGSNEARELALKPPEAEPQTEPAPQQPEPQEELREEP
Ga0207645_1076209913300025907Miscanthus RhizosphereMNETQRLEGLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTNEARELPSLKPPES
Ga0207704_1129191223300025938Miscanthus RhizosphereMNETQRLEGLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRR
Ga0207704_1177947323300025938Miscanthus RhizosphereMNETQRLENLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGSAEARELSTTRAPEPESSPEP
Ga0207651_1014137843300025960Switchgrass RhizosphereMNETQRLENLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGSAEARELSMTRASEP
Ga0207712_1093919913300025961Switchgrass RhizosphereMNETQRLESLLDAGNGGSVTLQRKDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFG
Ga0209234_120683613300026295Grasslands SoilMNETQRLETLLGAGNGGSVRLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLDPEEAKTLLDQLRESGRRWVFGTD
Ga0209239_132888613300026310Grasslands SoilMNETQRLESLLAGGNGGSVRLLRRDAQELAQKLKVRGNPGAAAMLLERLNSPGDVDLKPEEARTLLEQLRASGRSWVFGSNEA
Ga0209057_108263813300026342SoilMNDTQKLESLLAAGNGGSVTLGRKDARELAQKLKARGEAGAAAKLAHKLDTPGDVSLEPEEAQSLLEQLRASGRRWVFGSNEARELPSMKA
Ga0209156_1019865633300026547SoilMTETQRLESLLAGGEGGSVTLPRQDARELAQKLKARGEADAAAALAEKLDAPGDVRLAPEEAKSLLERLRASGRRWVFGTNE
Ga0209161_1013971913300026548SoilMNETQRLESLLAGGNGGSVRLPRRDAQELAQKLRVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEAKELPSLKPPEL
Ga0209474_1075498613300026550SoilMTETQRLESLLAGGEGGSVTLPRQDARELAQKLKARGEADAAAALALKLDAPGDVRLAPEEAKSLLERLRASGRRWVFGTN
Ga0209577_1063206623300026552SoilMNETQRLETLLGAGNGGSVRLPRRDAQELAQKLKVRGNPGAAARLVELLNSPGDVDLDPEEAKTLLDQLRESGRRW
Ga0209178_119053023300027725Agricultural SoilMNETQRLESLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLMERLNSPGDVDLEAEEAKSLLEQLRESGRAWVFGSTEARELS
Ga0307320_1027933923300028771SoilMNETQRLESLLDAGNGGNVTLPRRDALELAQKLNVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTTEARELPSLKPPETES
Ga0307283_1008065033300028790SoilMTDSQRLENLLAGGRGGPVTLPRKDAQELAQKLKARGEPEAAATLAEKLVTPGDVSIEPEEAAGLLEQLRASG
Ga0307299_1000546613300028793SoilMNETQRLESLLEGGNGGSVTLPRRDALELVQKLKVRGNPAAAARLVELLNAPGDVDLNPEEAKSLLEQLRESGRRWVFGTTEARELPSLKPPETESAPEP
Ga0307287_1001114543300028796SoilMNETQRLESLLDAGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTTEARELPSLKPPETE
Ga0307277_1008380733300028881SoilMTETQRLESLLAGGNGGSVTLARQDARELAQKLKARGEPRAAAILAHKLDAPGDVSLEAEEAQSLLEQLRASGRRWVFGSDEARELPSMKA
Ga0308190_104966623300030993SoilMNETQRLESLLEGGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTTEARELP
Ga0307469_1098056923300031720Hardwood Forest SoilMNETQRLESLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGSAEAR
Ga0307469_1110157723300031720Hardwood Forest SoilMNDTQKLESLLAAGNGGSVTLPRKEARELAQKLKARGEAAAAAKLAEKLDTPGDVSLEPGEATTLLEQLRASGRRWVFGTTEARELPSMQAPEP
Ga0310900_1036501333300031908SoilMNETQRLENLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGSAEARELSTTRAPEPES
Ga0308176_1177088213300031996SoilMTETHRLETILAGGNGGSVTLVRKDARELAQKLRARGEPEAAAILAHKLDAPGDVSLEPDEAQSLLEQLRESGRRWVFGSKDARELPSLGTPQREPEATPK
Ga0310889_1070483023300032179SoilMNETQRLENLLAGGNGGSVTLPRRDAQELAQKLKVRGNPGAAARLTELLNSPGDVNLEAEEAKSLLEQLRESGRAWVFGSAEARELSMTRAPEPESSPEPE
Ga0310811_1047200333300033475SoilMNETQRLESLLEGGNGGSVTLPRKDALELVQKLKVRGNPGAAARLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTNEARELPSLKPPESESA
Ga0310811_1146055023300033475SoilMNETQRLESLLEGGNGGNVTLPRRDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKNLLEQLRESGRRWVFGTNEARELPSLKPPESESAPEPEP
Ga0247829_1067010023300033550SoilMNETQRLESLLDAGNGGSVTLPRKDALELAQKLKVRGNPGAATRLVELLNSPGDVDLNPEEAKSLLEQLRESGRRWVFGTTEARELPSLKPPESESAPEPEPEAQ
Ga0372943_0082459_199_5523300034268SoilMTDTRRLETLLAAGKGGTVTLPRKDAQELAQKLKARGEPRAAASLAEKLDAPGDVSLAPDEADSLLEQVRASGRRWVFGTNEGRELPSMQKPPEREPEPEPKQKPGLFARLFGKGDE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.