Metagenome / Metatranscriptome Family F096951

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096951
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	72 residues
Representative Sequence	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPTQTAALRLIAQTEEALTDEAAEAPLVRV
Number of Associated Samples	61
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	26.92 %
% of genes from short scaffolds (< 2000 bps)	83.65 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.154 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (51.923 % of family members)
Environment Ontology (ENVO)	Unclassified (51.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.00% β-sheet: 16.00% Coil/Unstructured: 54.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00982	Glyco_transf_20	4.81
PF04542	Sigma70_r2	2.88
PF00072	Response_reg	1.92
PF04964	Flp_Fap	1.92
PF00691	OmpA	1.92
PF05532	CsbD	0.96
PF13561	adh_short_C2	0.96
PF06627	DUF1153	0.96
PF00892	EamA	0.96
PF02104	SURF1	0.96
PF13701	DDE_Tnp_1_4	0.96
PF07978	NIPSNAP	0.96
PF02371	Transposase_20	0.96
PF13466	STAS_2	0.96
PF02350	Epimerase_2	0.96
PF13391	HNH_2	0.96
PF12599	DUF3768	0.96
PF00239	Resolvase	0.96
PF03740	PdxJ	0.96
PF07690	MFS_1	0.96
PF13193	AMP-binding_C	0.96
PF08447	PAS_3	0.96
PF13817	DDE_Tnp_IS66_C	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	4.81
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.88
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.88
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.88
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	1.92
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0854	Pyridoxine 5'-phosphate synthase PdxJ	Coenzyme transport and metabolism [H]	0.96
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.96
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.96
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.96
COG3346	Cytochrome oxidase assembly protein ShyY1	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
All Organisms	root	All Organisms	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
cellular organisms	root	All Organisms → cellular organisms	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.27 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.88 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	1.92 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	1.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.15 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.85 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.92 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	0.96 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_100634144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	728	Open in IMG/M
3300004082\|Ga0062384_101251131	Not Available	541	Open in IMG/M
3300004092\|Ga0062389_101275982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	920	Open in IMG/M
3300004092\|Ga0062389_104814621	Not Available	508	Open in IMG/M
3300005176\|Ga0066679_10437383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300005538\|Ga0070731_10380994	Not Available	937	Open in IMG/M
3300005541\|Ga0070733_10167034	All Organisms → cellular organisms → Bacteria → Proteobacteria	1432	Open in IMG/M
3300005541\|Ga0070733_10217327	Not Available	1253	Open in IMG/M
3300005541\|Ga0070733_10624184	Not Available	723	Open in IMG/M
3300005541\|Ga0070733_10890100	Not Available	598	Open in IMG/M
3300005557\|Ga0066704_11060139	Not Available	500	Open in IMG/M
3300005560\|Ga0066670_10872643	Not Available	547	Open in IMG/M
3300005586\|Ga0066691_10436614	Not Available	781	Open in IMG/M
3300006797\|Ga0066659_11328891	Not Available	600	Open in IMG/M
3300006800\|Ga0066660_11452892	Not Available	538	Open in IMG/M
3300006854\|Ga0075425_102576328	Not Available	562	Open in IMG/M
3300006893\|Ga0073928_10001000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57672	Open in IMG/M
3300006893\|Ga0073928_10001424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	46316	Open in IMG/M
3300009012\|Ga0066710_101688631	Not Available	964	Open in IMG/M
3300009038\|Ga0099829_10132041	Not Available	1978	Open in IMG/M
3300009038\|Ga0099829_10402397	Not Available	1132	Open in IMG/M
3300009038\|Ga0099829_11402868	Not Available	577	Open in IMG/M
3300009038\|Ga0099829_11734182	Not Available	512	Open in IMG/M
3300009088\|Ga0099830_10811369	Not Available	772	Open in IMG/M
3300009088\|Ga0099830_11375996	Not Available	587	Open in IMG/M
3300009089\|Ga0099828_10219879	Not Available	1698	Open in IMG/M
3300009089\|Ga0099828_11040571	Not Available	729	Open in IMG/M
3300009089\|Ga0099828_11285024	Not Available	648	Open in IMG/M
3300009090\|Ga0099827_10240451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	1518	Open in IMG/M
3300009090\|Ga0099827_10413145	Not Available	1154	Open in IMG/M
3300009090\|Ga0099827_10941920	Not Available	748	Open in IMG/M
3300009137\|Ga0066709_100554020	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300009137\|Ga0066709_100882117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1302	Open in IMG/M
3300010343\|Ga0074044_10940734	Not Available	565	Open in IMG/M
3300010379\|Ga0136449_104374025	Not Available	521	Open in IMG/M
3300011120\|Ga0150983_14665591	Not Available	740	Open in IMG/M
3300011120\|Ga0150983_15499592	Not Available	857	Open in IMG/M
3300011120\|Ga0150983_15800530	Not Available	569	Open in IMG/M
3300011269\|Ga0137392_10188665	Not Available	1681	Open in IMG/M
3300011269\|Ga0137392_10243264	Not Available	1480	Open in IMG/M
3300011269\|Ga0137392_11223784	Not Available	609	Open in IMG/M
3300011270\|Ga0137391_10308733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300011270\|Ga0137391_10590634	Not Available	932	Open in IMG/M
3300011271\|Ga0137393_11468694	Not Available	571	Open in IMG/M
3300011998\|Ga0120114_1112821	Not Available	520	Open in IMG/M
3300012096\|Ga0137389_11334808	Not Available	611	Open in IMG/M
3300012181\|Ga0153922_1083290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300012189\|Ga0137388_10152625	Not Available	2047	Open in IMG/M
3300012189\|Ga0137388_10451296	Not Available	1193	Open in IMG/M
3300012189\|Ga0137388_11279972	Not Available	672	Open in IMG/M
3300012189\|Ga0137388_11900985	Not Available	525	Open in IMG/M
3300012198\|Ga0137364_10350248	Not Available	1102	Open in IMG/M
3300012198\|Ga0137364_10418960	Not Available	1003	Open in IMG/M
3300012199\|Ga0137383_10522641	Not Available	869	Open in IMG/M
3300012199\|Ga0137383_10934847	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300012202\|Ga0137363_10687139	Not Available	866	Open in IMG/M
3300012205\|Ga0137362_10865874	Not Available	772	Open in IMG/M
3300012205\|Ga0137362_11198913	Not Available	643	Open in IMG/M
3300012206\|Ga0137380_10137128	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300012206\|Ga0137380_10158570	Not Available	2063	Open in IMG/M
3300012207\|Ga0137381_10551430	Not Available	1005	Open in IMG/M
3300012208\|Ga0137376_10733557	Not Available	852	Open in IMG/M
3300012208\|Ga0137376_11656830	Not Available	531	Open in IMG/M
3300012209\|Ga0137379_10293936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1535	Open in IMG/M
3300012209\|Ga0137379_10379639	Not Available	1322	Open in IMG/M
3300012209\|Ga0137379_10468456	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300012209\|Ga0137379_11121280	Not Available	693	Open in IMG/M
3300012210\|Ga0137378_11592897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300012350\|Ga0137372_10096634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2485	Open in IMG/M
3300012351\|Ga0137386_10683148	Not Available	738	Open in IMG/M
3300012359\|Ga0137385_10490014	Not Available	1041	Open in IMG/M
3300012363\|Ga0137390_10053247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3929	Open in IMG/M
3300012363\|Ga0137390_10113326	Not Available	2684	Open in IMG/M
3300012363\|Ga0137390_11020952	Not Available	778	Open in IMG/M
3300012363\|Ga0137390_11125388	Not Available	734	Open in IMG/M
3300012363\|Ga0137390_11681985	Not Available	570	Open in IMG/M
3300012917\|Ga0137395_11031777	Not Available	587	Open in IMG/M
3300012927\|Ga0137416_10914267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300013764\|Ga0120111_1031468	Not Available	1414	Open in IMG/M
3300013770\|Ga0120123_1062670	Not Available	811	Open in IMG/M
3300014056\|Ga0120125_1101813	Not Available	671	Open in IMG/M
3300014501\|Ga0182024_10000115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	167447	Open in IMG/M
3300014501\|Ga0182024_10004005	All Organisms → cellular organisms → Bacteria → Proteobacteria	34376	Open in IMG/M
3300014501\|Ga0182024_10031879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8996	Open in IMG/M
3300014501\|Ga0182024_10099236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4248	Open in IMG/M
3300016750\|Ga0181505_10490365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1623	Open in IMG/M
3300021086\|Ga0179596_10707902	Not Available	510	Open in IMG/M
3300021171\|Ga0210405_10864798	Not Available	689	Open in IMG/M
3300021420\|Ga0210394_10051876	All Organisms → cellular organisms → Bacteria → Proteobacteria	3581	Open in IMG/M
3300021420\|Ga0210394_10076031	All Organisms → cellular organisms → Bacteria → Proteobacteria	2904	Open in IMG/M
3300021420\|Ga0210394_10094401	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300021420\|Ga0210394_10376086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300022507\|Ga0222729_1067233	Not Available	523	Open in IMG/M
3300022557\|Ga0212123_10001748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57663	Open in IMG/M
3300027846\|Ga0209180_10139173	Not Available	1396	Open in IMG/M
3300027862\|Ga0209701_10123640	Not Available	1600	Open in IMG/M
3300027867\|Ga0209167_10102526	Not Available	1465	Open in IMG/M
3300027867\|Ga0209167_10513462	Not Available	656	Open in IMG/M
3300027869\|Ga0209579_10646267	Not Available	573	Open in IMG/M
3300027869\|Ga0209579_10725078	Not Available	538	Open in IMG/M
3300027875\|Ga0209283_10367070	Not Available	942	Open in IMG/M
3300027905\|Ga0209415_10028757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8118	Open in IMG/M
3300031708\|Ga0310686_116056857	Not Available	505	Open in IMG/M
3300032515\|Ga0348332_11201895	Not Available	637	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.38%
Aquatic	Environmental → Aquatic	7.69%
Plants	Host-Associated → Plants	0.96%
Fungi	Host-Associated → Fungi	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.42%
Freshwater	Environmental → Aquatic → Freshwater	4.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.88%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%
Mycelium	Host-Associated → Fungi → Mycelium	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.88%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	51.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1006341442	3300004082	Bog Forest Soil	VFEGAPPLAWRISYRHPFRPDDGGIRFVPDESEAAAEKLRLELRGYAVSKPTRAAALRLIAQTEELISGAAAKAPFDRL*
Ga0062384_1012511311	3300004082	Bog Forest Soil	MAWRISYRHPLRPSDGGVRYVPDQSEAVAEKLRLELRGYAVSNPTQTAVLRLIAQTEETMGDPAPAPRPFLNC*
Ga0062389_1012759822	3300004092	Bog Forest Soil	MAWRISYRHPFRPDDGGIRFVPDVSEAAAEKLRLELRGYTVSTPTQAAALRLIAQTEEVISGEAVEAPLDRF*
Ga0062389_1048146211	3300004092	Bog Forest Soil	MAWRISYLHPLRRDDGGIRFVPDQSEAAAEKLRLELRGYAVSSPKRTGALRLIAQTEETMTEAPKPRPFLNC*
Ga0066679_104373832	3300005176	Soil	MAWRISYRHPLRRDDGGIRYVPDQSEAFAEKLRLELRGYAVSKPTQAAALRLIAQTDEEITGQAVRSFLDR*
Ga0070731_103809942	3300005538	Surface Soil	MAWRISYRHPLRPDDGGLRFVPDQSEAAAEKLRLELRGYLVSKPTQAAALRLIAQTEEAITGSAVEVSFDRLARSD*
Ga0070733_101670342	3300005541	Surface Soil	VAWRISYRHPFRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSMPTRAAALRLIAQTEEAISGEAAKAPFDRL*
Ga0070733_102173273	3300005541	Surface Soil	VAWRISYRHPLRPDDGGLRFVPDQSEAAAEKLRLELRGYLVSKPTQAAALRLIAQTEEAITGRAAEVSFDRLARSD*
Ga0070733_106241841	3300005541	Surface Soil	VAWRISYRHPLRRDDGGIRFVSDQAEAAAEKLRLELRGYAVSQPTQAAALRLIAQTEEVLTGEAAKAPLLRF
Ga0070733_108901002	3300005541	Surface Soil	MPWRISYRHPLRPDDGGVRFLPDQSDAAAEKLRLELRGYVVSSPIRTGAFRLIAQTEEVIAGEAGAARSFLDP*
Ga0066704_110601391	3300005557	Soil	MPWRISYRHPLRPDDGGIRFVPAQSEAAAEKLRLELRGYAVSEPTQAADLRLIAQTEEVLTDEAVLAPLVRV*
Ga0066670_108726431	3300005560	Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVTEPIEVAALRLIEQTEEVLTDEAVLAPLVGC*
Ga0066691_104366143	3300005586	Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTEGLRLIAQTEEVLTD
Ga0066659_113288912	3300006797	Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0066660_114528922	3300006800	Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPMQTEGLQLTAQTEEVL
Ga0075425_1025763282	3300006854	Populus Rhizosphere	MAWRLSYRHPLRRDDGGIRYVPDQSEAAAEKLRLELRGYAVSKPTQAAALRLIAQTDEEITGEAVRSFLDR*
Ga0073928_1000100033	3300006893	Iron-Sulfur Acid Spring	MAWRISYWHPLRRDDGGVRFVSDQSEAAAEKLRLELRGYVVTSPTQTSALGLIAQTEEGIWGEGAKAPA*
Ga0073928_100014245	3300006893	Iron-Sulfur Acid Spring	VAWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPSQAAALRLIAQTEEAITGDATEAPLLRF*
Ga0066710_1016886312	3300009012	Grasslands Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTESLRLTAQTEEVLTDEAVLAPLVGC
Ga0099829_101320413	3300009038	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQAEAAAEKLRLELRGYAVSQPTQAAALRLMAQTKEVLTDEAAETPFVRFLDR*
Ga0099829_104023972	3300009038	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPILTEGLRLTAQTEEVLTDEAVLARSFVFRRLAPAL*
Ga0099829_114028682	3300009038	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPTQTAALRLIAQTEEALTDEAAEAPLVRV*
Ga0099829_117341821	3300009038	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPTQTAALRLIAQTEEA
Ga0099830_108113692	3300009088	Vadose Zone Soil	LRTPDYSRYNCREVFEGGSPMPWRISYQHPLRPDDGGIRFVPDQAEAAAEKLRLELRGYAVSQPTQAAALRLMAQTKEVLTDEAAETPFVRFLDR*
Ga0099830_113759962	3300009088	Vadose Zone Soil	DYSGYICREAFEGGFPPMPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYVVSKPTQAADLRLIAQTEEVLTGEAAEAPLVRV*
Ga0099828_102198793	3300009089	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQEAAAEKLRLELRGCAVSQPTQAAALRLMAQTKEVLTDEAAETPFVRFLDR*
Ga0099828_110405711	3300009089	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYVVSKPTQTEGLRLIAQTEEALTDEAAAAPLARV
Ga0099828_112850241	3300009089	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQAEAASEKLRLELRSYAVSKPTQAAPLRLIAQTEEVLAEAAEALLVRV*
Ga0099827_102404511	3300009090	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPIRTEGLRLIAQTEEVDEAAEAPLVRV*
Ga0099827_104131451	3300009090	Vadose Zone Soil	MPWRISYQHPFRPDDGGIRFVPDQAEAAAEKLRLELRGYAVSQPTQAAALRLMAQTKEVL
Ga0099827_109419202	3300009090	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPILTEGLRLTAQTEEVLTDEAVL
Ga0066709_1005540202	3300009137	Grasslands Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTESLRLTAQTEEVLTDEAVLAPLVGC*
Ga0066709_1008821172	3300009137	Grasslands Soil	MPWRISYRHPLRPDDGGIRFVPAQSEAAAEKLRLELRGYAVSEPIQTEGLRLTAQTGEVLTDEAVLAPLVRV*
Ga0074044_109407342	3300010343	Bog Forest Soil	MAWRISYRHPFRPDDGGIRFVPDVSEAAAEKLRLELRGYTVSTPTQAAALRLIAQTEEVISGEAVEAPLD
Ga0136449_1043740252	3300010379	Peatlands Soil	MAWRISYRHPLRRDDGGLRYVPDQSEAFAEKLRLELRGYTVSKPTQAAALRLIAQTDEAITGEVVRSFLDR*
Ga0150983_146655912	3300011120	Forest Soil	MAWRISYQHPLRRDDGGIRYVPDRSEAFSEKLRLELRGYAVSYPTQAGALRMIAQTDQAITGEAVGSLLDR*
Ga0150983_154995921	3300011120	Forest Soil	MPWRISYQHPLRPNDGGIRFVPDQSEAAAEKLRLELRGYAVSQPTQAAALRLIAQAEETIAGEAAEAPFVRV*
Ga0150983_158005301	3300011120	Forest Soil	MPWRISYQHPLRADDGGIRFVPDQSEAAAEKLRLELRGYVVSPPTQAAALRLIAQTKELLTDEAAEAPAALVRF*
Ga0137392_101886651	3300011269	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYVVSKPTQAADLRLIVQTEEVLTGEAAEAPLVRV*
Ga0137392_102432641	3300011269	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTEGLRLTAQTEEVLTDEAVLAPL
Ga0137392_112237841	3300011269	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELSGYAVSEPTQAADLRLIAQPEEVLMDEAVL
Ga0137391_103087332	3300011270	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELSGYAVSEPTQAADLRLIAQPEEVLMDEAVLAPLVRV*
Ga0137391_105906341	3300011270	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYVVSKPTQTAALRLIAQTEEALTDEAAAAPLAGV*
Ga0137393_114686941	3300011271	Vadose Zone Soil	LRPDDGGIRFVPDQAEAASEKLRLELRSYAVSKPTQAAPLRLIAQTEEVLAEAAEALLVRV*
Ga0120114_11128211	3300011998	Permafrost	VVWFISYQHPLRPDDGGIRFVSDQSEATAEKLRLELRGYVVSNASQTGALRLVAQTQEAITGEAAEAPFVRF*
Ga0137389_113348082	3300012096	Vadose Zone Soil	RYICREVFKGGSPMPWRISYRHPLRPDDGGIRFVPDQAEAASEKLRLELRSYAVSKPTQAAPLRLIAQTEEVLAEAAEALLVRV*
Ga0153922_10832901	3300012181	Attine Ant Fungus Gardens	MAWRISYRHPLRRDDGGLRYVPDQSEALAEKLRLELRGYAVSKPTQAGALRLISQTAETVTGETARSFSND*
Ga0137388_101526253	3300012189	Vadose Zone Soil	MPWRSSYQHPLRPDDGGIRFVPDQAEAAAEKLRLELRGYAVSQPTQAAALRLMAQTKEVLTDEAAETPFVRFLDR*
Ga0137388_104512962	3300012189	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPTQTEGFRLTAQTEEVLPDEAAEAPARSRLLGAIFHTAPGP*
Ga0137388_112799722	3300012189	Vadose Zone Soil	SPMPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELGGYAVSEPILTEGLRLTAQTEEVLTDEAVLARSFVFRRLAPAL*
Ga0137388_119009851	3300012189	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAASEKLRLELRGYAVSKPTQAAALRLITQTEEVLAEAAEALLVRV*
Ga0137364_103502481	3300012198	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVLAQSEAAAEKLRLELRGYAVSEPIQTEGLRLTAQTGEVLTDEAVLAPLVRV*
Ga0137364_104189603	3300012198	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRYVPDQSEAAAEKLRLDSRGYPVSEPIAVAARRVMAQTEEVIAGHAAEAPLDRF*
Ga0137383_105226412	3300012199	Vadose Zone Soil	MAWRISFRHPLRPDDGGIRFVPAQSEAAAEKLRLELRGYAVSEPIQTEGLRLTAQTEEVL
Ga0137383_109348471	3300012199	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVTEPIEVAARRVIEQEEELLTDEAVLAPLVGF*
Ga0137363_106871392	3300012202	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAVAEKLRLELRGYAVSEPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137362_108658741	3300012205	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTAALRLIEQGEEVITGEAAEVQLVRF*
Ga0137362_111989131	3300012205	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTEGLRLIEQEAEVITGEGAEAPLVRV*
Ga0137380_101371282	3300012206	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPTQTAALRLIAQTEV*
Ga0137380_101585704	3300012206	Vadose Zone Soil	MSWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPTQTAALRLIEQTEEVDEAAETPLVRV*
Ga0137381_105514301	3300012207	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPTQAADLRLIAQTEEVLTDEAVLAPLVRV*
Ga0137376_107335573	3300012208	Vadose Zone Soil	MPWRISSRHPLRPDDGGIRFVPAQSEAAAEKLRLELRGYAVSEPIQTAGLRLTAQTEEVLTDEAVLAPL
Ga0137376_116568302	3300012208	Vadose Zone Soil	MPWRISYQHPLRPGDGGIRFVPDQSEAAAEKLRLELRGYAVSDPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137379_102939364	3300012209	Vadose Zone Soil	MPWRISYRHPHRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPIQTESLRLTAQTEEVLTDEAAEAPLVRV*
Ga0137379_103796393	3300012209	Vadose Zone Soil	MPWHISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTESLRLTEQTEEVLADEAVLAPLVRV*
Ga0137379_104684562	3300012209	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPTQTAALPLIAQTEEALTDEAAEAPLVRVLD
Ga0137379_111212801	3300012209	Vadose Zone Soil	MSWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137378_115928972	3300012210	Vadose Zone Soil	HPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSDPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137372_100966342	3300012350	Vadose Zone Soil	MPWHISYRHPLRPNDGGIRFVPDQSEAAAEKLRFELRGYAVSEPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137386_106831481	3300012351	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVYEPIQTESPRLTAQTEEVLTDEAVLAPLVGC*
Ga0137385_104900142	3300012359	Vadose Zone Soil	MPWRISYRHPLRLDDGGIRFVPDQLKAAAEKLRLELRGYAVSEPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137390_100532473	3300012363	Vadose Zone Soil	HPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPTQAADLRLIAQPEEVLMDEAVLAPLVRV*
Ga0137390_101133263	3300012363	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYVVSKPTQTEGLRLIAQTEEALTDEAAAAPLARV*
Ga0137390_110209522	3300012363	Vadose Zone Soil	DDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137390_111253881	3300012363	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAGAEKLRLELRGYAVSDPIQTEGLRLTAQTEEVLTDEAVLAPLVRV*
Ga0137390_116819851	3300012363	Vadose Zone Soil	LRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPTQTEGFRLTAQTEEVLPDEAAEAPARSRLLGAIFHTAPGP*
Ga0137395_110317772	3300012917	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPTQTEGLRLSAQAEEVLTDEAVLAPLVRV*
Ga0137416_109142672	3300012927	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPIQTEGLQLIEQEAEVITDEGAEAPLVRV*
Ga0120111_10314682	3300013764	Permafrost	VAWRITYQHPLRPNDGGIRFVPDQSEASAEKLRLELRGYAVSQPTQAAALRLIAQTEEVMTGEAVETPLVRV*
Ga0120123_10626703	3300013770	Permafrost	MPWRISYQHPLRPNDGGIRFVPDQSEAAAEKLRLELRGYAVSTPTQAAALRLIAQTEEILTDEAAEAPLVRV*
Ga0120125_11018132	3300014056	Permafrost	MPWRISYEHPFRPDDGGIRFLPDQSEAAAEKLRLELRGYVVSSPTQAAALRLVAQTEEAITGEVPNAPSVRFLNL*
Ga0182024_1000011524	3300014501	Permafrost	VAWRISYQHPLRPNDGGIRFVPDQSEAAAEKLRLELRGYAVSPPTQAAALRLIAQAEEMITGEAAEAPFVGL*
Ga0182024_1000400518	3300014501	Permafrost	MPWRISYQHPLRADDGGIRFVPDQSEAAAEKLRLELRGYVVSTPTQAAALRLIAQTEEVLTDDAAETPVVRV*
Ga0182024_100318791	3300014501	Permafrost	MPWRISYQHPLRPNDGGIRFVPDELDAAAEKLRLELRGYAVSQPTQATALRLIAQTNEELAGEAVRSFKLLTPAL*
Ga0182024_100992365	3300014501	Permafrost	MAWRISYRHPFRPDDGGIRFVPDESEAAAEKLRLELRGYAVSPPTQAAALRLIAQTEEVISGEVAEAPFDRF*
Ga0181505_104903654	3300016750	Peatland	RVQVAWRISYRHPFRPDDGGIRFVPDESEAAAEKLRLELRGYAVSMPTRAAALRLIAQTEEVISGEAAKAPFDRL
Ga0179596_107079021	3300021086	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSKPTQTAALRLIAQTEEALTDEAAEAPLVRV
Ga0210405_108647981	3300021171	Soil	PLRADDGGIRFVPDQSEAAAEKLRLELRGYAVSTPAQAAALRLIAQTEEVITGEAVETPLVRV
Ga0210394_100518764	3300021420	Soil	MPWRISYQHPLRADDGGIRFVPDQSEAAAEKLRLELRGYAVSQPTQAAALRLIAQTEEVMTGEAVETPLVRV
Ga0210394_100760313	3300021420	Soil	VAWRISYQHPLRPNDGGIRFVPDQSEAAAEKLRLELRGYAVSQPTQAAALRLIAQAEETIAGEAAEAPFVRV
Ga0210394_100944013	3300021420	Soil	MPWRISYQHPLRADDGGIRFVPDQSEAAAEKLRLELRGYAVSTPEQAAALRLLAQAEEVITGEAVETPLVRV
Ga0210394_103760862	3300021420	Soil	MAWRISYRHPFRPDDGGIRFVPDESEAAAEKLRLELRGYAVSPPTQAAALRLIAQTEEVISGEAAEAPFDHF
Ga0222729_10672332	3300022507	Soil	MPWRISYQHPLRADDGGIRFVPDQSEAAAEKLRLELRGYAVSQSTQAAALRLIAQTELVMTGEAVETPLVRV
Ga0212123_1000174832	3300022557	Iron-Sulfur Acid Spring	MAWRISYWHPLRRDDGGVRFVSDQSEAAAEKLRLELRGYVVTSPTQTSALGLIAQTEEGIWGEGAKAPA
Ga0209180_101391731	3300027846	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQAEAAAEKLRLELRGYAVSQPTQAAALRLMAQTKEVLTDEAAETPFVRFLDR
Ga0209701_101236402	3300027862	Vadose Zone Soil	MPWRISYRHPLRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSEPILTEGLRLTAQTEEVLTDEAVLARSFVFRRLAPAL
Ga0209167_101025262	3300027867	Surface Soil	VAWRISYRHPFRPDDGGIRFVPDQSEAAAEKLRLELRGYAVSMPTRAAALRLIAQTEEAISGEAAKAPFDRL
Ga0209167_105134621	3300027867	Surface Soil	MPWRISYRHPLRPDDGGVRFLPDQSDAAAEKLRLELRGYVVSSPIRTGAFRLIAQTEEVIAGEAGAARSFLDP
Ga0209579_106462671	3300027869	Surface Soil	MAWRISYRHPLRPDDGGLRFVPDQSEAAAEKLRLELRGYLVSKPTQAAALRLIAQTEEAITGSAVEVSFDRLARSD
Ga0209579_107250781	3300027869	Surface Soil	VPVAWRISYQHPLRPNDGGIRFVPDQSEAAAEKLRLELRGYAVSQPTQAAALRLIEKAEETITGEAAEAPFVRV
Ga0209283_103670702	3300027875	Vadose Zone Soil	MPWRISYQHPLRPDDGGIRFVPDQEAAAEKLRLELRGCAVSQPTQAAALRLMAQTKEVLTDEAAETPFVRFLDR
Ga0209415_100287575	3300027905	Peatlands Soil	MAWRISYRHPLRRDDGGLRYVPDQSEAFAEKLRLELRGYTVSKPTQAAALRLIAQTDEAITGEVVRSFLDR
Ga0310686_1160568571	3300031708	Soil	MAWRISYRHPFRPDDGGIRFVPDESEAAAEKLRLELRGYAVSPPTQAAALRLIAQTEEVISGEAAEAPFDRF
Ga0348332_112018951	3300032515	Plant Litter	MAWRISYRHPFRPDDGGIRFVPDESEAAAEKLRLELRGYSVSPPTQAAALRLIAQTEEVISGEAAEAPFDRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096951

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences