Metagenome / Metatranscriptome Family F097077

Basic Information
Family ID	F097077
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	58 residues
Representative Sequence	NSKPWAEVFLDGVEKKSLGQTPLSGVRVPIGSVLVFENPQFQTKRYRVTGNETGIQIVFP
Number of Associated Samples	85
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (17.308 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.769 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 26.14% Coil/Unstructured: 73.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF09660	DUF2397	14.42
PF07719	TPR_2	7.69
PF00072	Response_reg	0.96
PF03741	TerC	0.96
PF13181	TPR_8	0.96
PF13577	SnoaL_4	0.96
PF08308	PEGA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.19%
Plants	Host-Associated → Plants	24.04%
Aquatic	Environmental → Aquatic	4.81%
Arthropoda	Host-Associated → Arthropoda	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.23%
Sediment	Environmental → Aquatic → Sediment	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.35%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1017248701	3300000559	Soil	ATKVTITFDVSLQINSKPWAEVSVDGVDKKALGQTPLSDVRVPIGSVLIFENPQFAPKRYRVTGDETGIQIVFP*
JGI1027J11758_126797822	3300000789	Soil	AEVFLDGVERKPLGQTPLSGVRVPIGSVLVFENPQFQPKRYRVTGNETGIQXVFP*
AF_2010_repII_A001DRAFT_100145113	3300000793	Forest Soil	SAETTKAMITFDATLQINAKPWAEVFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
soilH2_104005712	3300003324	Sugarcane Root And Bulk Soil	RKSLGQTPLSGVRVPIGAVLVFENPQFQAKKYRVTGKETGIQMVFP*
Ga0062590_1014506441	3300004157	Soil	VTFDVSLPINSRPWSDVYIDGPQRKALGQTPLGRVSVPIGSVLIFENPKFQPKRYRVTGNESSIQISFP*
Ga0063356_1034780082	3300004463	Arabidopsis Thaliana Rhizosphere	WADVLIDGLERKTLGQTPLSGVRVPIGGVLVFAHPKFGLKKYRVNGSETAIQIAFP*
Ga0066674_104648621	3300005166	Soil	ETTKTMITFDVSVQINSKPWAAVFIDGVEKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIVFQ*
Ga0066683_103108212	3300005172	Soil	FIDGVEKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQVVFQ*
Ga0066683_105547281	3300005172	Soil	TFDVSVQINSKPWAAVFIDGVEKKALGQTPLSGVRVPIGSILIFENPRFQTKTYRVTGNETGIQIVFP*
Ga0066685_100969701	3300005180	Soil	MITFEATVQINAKPWADVFLDGVVRKPLGQTPLSGVQVPIGGVLVFENPAFPTKTYRVTGNETGIQIVFP*
Ga0066675_104281362	3300005187	Soil	KPWAAVFIDGVEKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIVFQ*
Ga0070690_1014692821	3300005330	Switchgrass Rhizosphere	KKALGQTPLSGVRVPIGSVLIFENPQFPAKRYRVTGTETGIQIVFP*
Ga0066388_1013940942	3300005332	Tropical Forest Soil	PWAEVFLDGVEKRSLGQTPLSGVRVPIGSVLVFENPQFQTKRYRVTGNETGIQIVFP*
Ga0070680_1008739361	3300005336	Corn Rhizosphere	GAERKGLGQTPLSSVRVPIGSVLLFENPRFQTKRYRVTGNETGIQIVFP*
Ga0070713_1004136871	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LGQTPLSGVRVPIGSVLIFQNPKFQPKRYRVTGTETGIQIVFP*
Ga0066682_106057801	3300005450	Soil	VQINARPWADVFIEGTEMKSLGQTPMSSVRVPIGGVLVFQNPKFPAKRYRVTGRESTIQIVFP*
Ga0070681_101772941	3300005458	Corn Rhizosphere	EVYIDGAERKGLGQTPLSSVRVPIGSVLLFENPRFQTKRYRVTGNETGIQIVFP*
Ga0070679_1019878412	3300005530	Corn Rhizosphere	MITFDVTVQINSKPWAEVFLDGVERKDLGQTPLSGVRVPIGGVLTFQNPQFQAKKYRITGNETGIQIVFP*
Ga0070684_1004133251	3300005535	Corn Rhizosphere	SEVFLDGVERKDLGQTPLSGVRVPIGGVLIFENPQFQAKRYRITGNETGIQVVFP*
Ga0066697_102695652	3300005540	Soil	INSKPWAAVFIDGVEKKALGQTPLSGVRVPIGSILIFENPRFQTKTYRVTGNETGIQIVFP*
Ga0066707_102130342	3300005556	Soil	ITFDVSVQINSKPWAAVFIDGVEKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQVVFQ*
Ga0066698_102663271	3300005558	Soil	EKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQVVFQ*
Ga0066698_105975912	3300005558	Soil	FDVSVQINSRPWADVFLEGVEKKALGQTPLSGVRVPIGGVLVFENPRFQPKRYRVTGNEPGIQIVFP*
Ga0068859_1003947111	3300005617	Switchgrass Rhizosphere	PWAEVFIDGSEKKDLGQTPLSGVRIPIGSVLIFENPQFQPKRYRVTGNETGIQMVFP*
Ga0066903_1003723123	3300005764	Tropical Forest Soil	WAEVFLDGAEQKDLGQTPLSGVRVPIGSVLIFQNPKFQPKRYRVTGNETGIQIVFP*
Ga0066903_1034105672	3300005764	Tropical Forest Soil	KPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0066903_1047374911	3300005764	Tropical Forest Soil	AMITFDVTVQINAKPWAEVFLDGVERKSLGQTPLSAIRVPIGSVLVFENPGFPIKKYRVTGNEKGVQIVFP*
Ga0066903_1057801951	3300005764	Tropical Forest Soil	MITIDVDVQINANPWADVFLDGVERKRLGQTPLSGMRVPIGSVLVFDNPGFPTKVYRVTGNEKRIQIVFP*
Ga0066903_1062555371	3300005764	Tropical Forest Soil	FDVTLQVNSKPWAEVFLDGVEKKSLGQTPLSGVRVPIGSVLVFENPQFQTKRYRVTGNETGIQIVFP*
Ga0066651_106842291	3300006031	Soil	AYRQPLGQTPLSGIVVPAGSTLVFENPNFPRKNYRVTGTETAIQVVFP*
Ga0066656_109678251	3300006034	Soil	TFDVTVQINSKPWSDVFVDGVERKTLGQTPLSGVRVPIGTVLIFENPQFQARKYRVTGKETGIQIVFP*
Ga0075417_104614961	3300006049	Populus Rhizosphere	AKPWAEVFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0079222_115044681	3300006755	Agricultural Soil	MISFDAAVQLNSKPWAEVFLDGVERKAIGQTPLSGVRVPIGSVLVFENPGFPKKKYRVSGNETGIQNVFP*
Ga0066659_101249831	3300006797	Soil	QINSKPWAAVFIDGVEKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIVFQ*
Ga0075428_1000956201	3300006844	Populus Rhizosphere	AEVFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRITGNETGIQIVFP*
Ga0075421_1000739301	3300006845	Populus Rhizosphere	AEVFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0075421_1016304231	3300006845	Populus Rhizosphere	VFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0075431_1001514741	3300006847	Populus Rhizosphere	DGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0075431_1021087011	3300006847	Populus Rhizosphere	VFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRITGNETGIQIVFP*
Ga0075420_1011154222	3300006853	Populus Rhizosphere	ADVYVDGIERRPLGQTPMSGVQVPIGGVLVFENSQFGVKKYRVTGRETAIQIVFP*
Ga0075425_1014160182	3300006854	Populus Rhizosphere	IQVNSKPWAEVFVDGADRKPLGQTPLSGVRVPIGGVLVFENPGFRPKRYRVTGNETGIQIVFP*
Ga0075425_1030478382	3300006854	Populus Rhizosphere	LDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0075436_1001467751	3300006914	Populus Rhizosphere	LGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0066710_1048718721	3300009012	Grasslands Soil	ITFDVSVQINSKPWAAVFIDGVEKKALGQTPLSGVRVPIGSILIFENPRFQTKTYRVTGNETGIQIVFP
Ga0105245_119545951	3300009098	Miscanthus Rhizosphere	MVIFEVTIPVNSKPWSEVFLEGAERKDLGQTPLSGVRVPIGGVLVFENPQFQAKRYRITGNETGIQVVFP*
Ga0066709_1045522132	3300009137	Grasslands Soil	SFDVPVQINARPWADVFVEGTEMKPLGQTPMSNVRVPIGGILVFQNPKFPTKRYRVTGTESTIQIVFP*
Ga0111538_117454001	3300009156	Populus Rhizosphere	LSGVKVPIGAVLVFQNPKFQAKRYRVTGNETGIQITFQ*
Ga0105248_115161511	3300009177	Switchgrass Rhizosphere	LSGVRIPIGSILIFENPRFQPKRYRVTGNETGIQVAFP*
Ga0105252_100645641	3300009678	Soil	LSGVRVPIGTVLIFENREFQPKKYRVTGNESGIQNVFP*
Ga0123355_110970431	3300009826	Termite Gut	WADVFLDGVERKSLGQTPLSAILPIGSVLVFENPGFPTKEYRVTGNENGIQIVFP*
Ga0126380_120558502	3300010043	Tropical Forest Soil	LDGAARKDLGQTPLSSVRVPIGSVLSFENPQFPTKKYRVTGNETGIQVVFP*
Ga0134088_106339171	3300010304	Grasslands Soil	TPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIVFP*
Ga0126370_104447692	3300010358	Tropical Forest Soil	FDVDVQINAKPWAEVFLDGVERKSLGQTPLSAMRLPIGSVLVFENPGFPTKKYRVTGNEKGIQIVFP*
Ga0126370_125169491	3300010358	Tropical Forest Soil	MIAFDLEVQINSRPWANVFVDGVEREALGQTPLSGVRVPIGSVLVFKNPAFPEKKFRVIGNETGIQVVFP*
Ga0126376_116042581	3300010359	Tropical Forest Soil	NSKPWAEVFVDGPEPKDLGQTPLSGVRVPIGSVLIFRNPKFQEKRYRVAGNETGIQIVFP
Ga0126376_119195791	3300010359	Tropical Forest Soil	QINSKPWAEVFLEGTERTSLGQTPLSGVRVPIGGILSFENPAFPKKRYRVTGNETGIQIVFP*
Ga0126379_110882872	3300010366	Tropical Forest Soil	GQTPMSSISVPIGGVLTFENPQFQAKKYRVVGNETGIQIVFP*
Ga0126379_114891541	3300010366	Tropical Forest Soil	PWAEVFLDGVARKPLGQTPLSGVQVPIGAVLVFENPEFQPKRYRVTGNETGLQIVFK*
Ga0126379_116825721	3300010366	Tropical Forest Soil	INRNETSKATVVFDITVQVNSKPWSEVFLEGVERRDLGQTPLSGVRVPIGGVLIFENPQFQAKRYRIAGNETGIQVVFP*
Ga0126381_1047986511	3300010376	Tropical Forest Soil	ETTKAMITFDVTLQINAKPWAEVFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0126381_1048094481	3300010376	Tropical Forest Soil	TRTMITFDATVQINSRPWAEVFLDGIERKDLGQTPLSGVRVPIGSVLVFQNPQFQPKKYRVTGNENGIQILFP*
Ga0134124_130678161	3300010397	Terrestrial Soil	KPWADVFIDGTEMKLLGQTPMSSVRVPIGGVLVFQNPKFPAKRYRVTGKESTIQIVFP*
Ga0126383_111216521	3300010398	Tropical Forest Soil	RKDLGQTPLSGVRVPIGGVLIFENPQFQAKRYRVTGNESGIQIVFP*
Ga0134122_128418382	3300010400	Terrestrial Soil	VRIPIGTVLIFENQQFQTKKYRVTGNETGIQNIFP*
Ga0137325_10256802	3300011415	Soil	ARPWAAVSQEGIESKDLGQTPLSGVRVPIGSMLVFRNPQFQPKRYRVTGNETGIQIVFP*
Ga0137314_10022012	3300011420	Soil	MITFDITVQINARPWAAVSQEGIESKDLGQTPLSGVRVPIGSMLVFRNPQFQPKRYRVTGNETGIQIVFP*
Ga0137426_11327431	3300011435	Soil	NVRINSRPWAEVFVDGVERKSLGQTPLSGVRIPIGTVLIFENRQFQTKKYRVTGNETGIQNVFP*
Ga0137364_112970622	3300012198	Vadose Zone Soil	LSGVIVPAGSTLVFENPNFPRKAYRVTGTETAIQVVFP*
Ga0137380_102304021	3300012206	Vadose Zone Soil	KKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIVFP*
Ga0150985_1062251172	3300012212	Avena Fatua Rhizosphere	KAMVVFDVSVQVNSKPWSEVFLDGVERKDLGQTPLSGVRVPIGGVLIFENPQFQAKRYRITGNETGIQVVFP*
Ga0137435_11048011	3300012232	Soil	VQINSRPWAEVFVDGVEKKSLGQTPLSGVRIPIGSVLIFENPKFQAKRHRVTGNETGIQIVFP*
Ga0137371_101178181	3300012356	Vadose Zone Soil	VEKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIVFP*
Ga0137371_101550891	3300012356	Vadose Zone Soil	VEKKALGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQVVFQ*
Ga0126375_106598561	3300012948	Tropical Forest Soil	TPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIIFP*
Ga0126369_100840693	3300012971	Tropical Forest Soil	DATLQINAKPWAEVFLDGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP*
Ga0126369_112580991	3300012971	Tropical Forest Soil	LGQTPLSGVRVPIGSVLIFQNPKFQPKRYRVTGNETGIQIVFP*
Ga0126369_116142212	3300012971	Tropical Forest Soil	NSKPWANVFIDGVERTAIGQTPLGGVQVPIGSVLIFENPRFPPKRYRVTGNETGIQIVFP
Ga0126369_121522232	3300012971	Tropical Forest Soil	INCRPWAEVFIEGAERKDLGQTPLSGVRVPIGTVLSFENPRFPAKKYRVTGNETGIQIVFP*
Ga0126369_132819081	3300012971	Tropical Forest Soil	RTMITFDVMLQINAKPWADVFLDGIDKKPLGQTPLSGIRAPIGAVLVFENPGFQTKRYRVTGNETGIQIVFP*
Ga0157375_109277951	3300013308	Miscanthus Rhizosphere	KATITFDINVQINSKPWAEVFVDGSEKKDLGQTPLSGVRIPIGSILIFENPQFQPKRYRVTGNETGIQVAFP*
Ga0163163_101830613	3300014325	Switchgrass Rhizosphere	GQTPLSGVRVPIGGVLIFENPQFQAKRYRITGNETGIQIVFP*
Ga0157376_100898511	3300014969	Miscanthus Rhizosphere	LSGVRVPIGGVLIFENPQFQAKRYRITGNETGIQVVFP*
Ga0134085_106025461	3300015359	Grasslands Soil	DGVEKKALGQTPLSGVRVPIGSILIFENPRFQTKTYRVTGNETGIQIVFP*
Ga0132256_1026496442	3300015372	Arabidopsis Rhizosphere	EAIVQINARPWAEVFLDGVERKSLGQTPLSGVQVPIGGVLVFENPAFQPKKYRITGNETGIQMVFP*
Ga0132255_1020000951	3300015374	Arabidopsis Rhizosphere	RPWAEVFIDGIEKKSLGQTPLSGVRVPIGSVLVFENPQFQAKKYRVTGNETGIQIVFP*
Ga0182032_109877262	3300016357	Soil	RPWAEVFLDGPEPKDLGQTPLSGVRVPIGSVLIFQNPQFQPKKYRVTGNETGIQIVFP
Ga0182039_101621963	3300016422	Soil	FDTTLQINSRPWAEVFLDGVDRKDLGQTPLSGVRVPIGSVLIFQNPQFQPKKYRVSGNETGIQIVFP
Ga0182038_114290132	3300016445	Soil	DVTVQINSRPWAEVFLDGVERKDLGQTPLSGVSVPIGSVLTFQNPQFQTKKYRVTGNETGIQIVFP
Ga0193751_10316333	3300019888	Soil	MITFDVSVRINSKPWAEVFVDGVERKSLGQTPLGSVRVPIGSVLSFENPQFQTKKYRVTGNETAIQIVFP
Ga0126371_134229811	3300021560	Tropical Forest Soil	TVQINSKPWAEVFLDGVERKDLGQTPLSGVRVPVGGVLSFHNPQFQTKIYRVTGNETGIQIVFP
Ga0242654_100959951	3300022726	Soil	KDLGQTPLSGVRVPIGSVLIFQNPKFQPKRYRVTGTETGIQIVFP
Ga0207707_106811031	3300025912	Corn Rhizosphere	EVYIDGAERKGLGQTPLSSVRVPIGSVLLFENPRFQTKRYRVTGNETGIQIVFP
Ga0207652_116340092	3300025921	Corn Rhizosphere	MITFDVTVQINSKPWAEVFLDGVERKDLGQTPLSGVRVPIGGVLTFQNPQFQAKKYRITGNETGIQIVFP
Ga0207650_108933491	3300025925	Switchgrass Rhizosphere	TPLSGVRVPIGGVLIFENPQFQAKRYRITGNETGIQVVFP
Ga0207687_110064291	3300025927	Miscanthus Rhizosphere	MVIFEVTIPVNSKPWSEVFLEGAERKDLGQTPLSGVRVPIGGVLVFENPQFQAKRYRITGNETGIQVVFP
Ga0209236_11388392	3300026298	Grasslands Soil	LGQTPLSGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQIVFQ
Ga0209153_11701111	3300026312	Soil	GPERQPLGQTPLSGVHVPIGSVLIFENPNFVGKTYRVTGREAEIRVTFP
Ga0209377_10877911	3300026334	Soil	SGVRVPIGSVLIFENPRFQTKTYRVTGNETGIQVVFQ
Ga0209488_111464172	3300027903	Vadose Zone Soil	ARTMVAFDTTVQINSKPWAEVFVDGVDRKDLGQTPLSGVQVPIGSVLLFQNPQFQPKKYRVTGSETGIQIVFP
Ga0209382_101038783	3300027909	Populus Rhizosphere	DGTARKPLGQTPLSGVQVPIGAVLVFENPEFQAKRYRVTGNETGIQIVFP
Ga0310900_106552512	3300031908	Soil	IKVPIGSVLIFENPQFQSKKYRVTENETAVQNVFP
Ga0306926_117331192	3300031954	Soil	VNSKPWSEVFLEGVERKDLGQTPLSGVRVPIGSVLIFENPQFQAKRYRITGNETGIQVVF
Ga0306920_1024164762	3300032261	Soil	FLDGGDRKGLGQTPLSGVRVPIGSVLIFQNPQFQPKKYRVTGNETGIQIVFP
Ga0373959_0171408_3_185	3300034820	Rhizosphere Soil	NSKPWAEVFLDGVEKKSLGQTPLSGVRVPIGSVLVFENPQFQTKRYRVTGNETGIQIVFP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097077

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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