Metagenome / Metatranscriptome Family F097081

Basic Information
Family ID	F097081
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	69 residues
Representative Sequence	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGSLAVHSVILAAI
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	2.88 %
% of genes from short scaffolds (< 2000 bps)	2.88 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (22.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.462 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.42% β-sheet: 0.00% Coil/Unstructured: 39.58%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13360	PQQ_2	2.88
PF02277	DBI_PRT	2.88
PF12802	MarR_2	1.92
PF03167	UDG	1.92
PF02705	K_trans	1.92
PF04191	PEMT	1.92
PF03640	Lipoprotein_15	1.92
PF13560	HTH_31	1.92
PF13744	HTH_37	0.96
PF04978	DUF664	0.96
PF06719	AraC_N	0.96
PF02656	DUF202	0.96
PF01261	AP_endonuc_2	0.96
PF13520	AA_permease_2	0.96
PF02518	HATPase_c	0.96
PF01476	LysM	0.96
PF03358	FMN_red	0.96
PF09579	Spore_YtfJ	0.96
PF03551	PadR	0.96
PF08281	Sigma70_r4_2	0.96
PF00892	EamA	0.96
PF03572	Peptidase_S41	0.96
PF02720	DUF222	0.96
PF00111	Fer2	0.96
PF00005	ABC_tran	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2038	NaMN:DMB phosphoribosyltransferase	Coenzyme transport and metabolism [H]	2.88
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.92
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.92
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	1.92
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	1.92
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	1.92
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.96
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.96
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.96
COG4977	Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain	Transcription [K]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300006050\|Ga0075028_100416459	Not Available	771	Open in IMG/M
3300009090\|Ga0099827_11223713	Not Available	653	Open in IMG/M
3300021478\|Ga0210402_11704173	Not Available	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.54%
Host-Associated	Host-Associated	13.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.88%
Plants	Host-Associated → Plants	13.46%
Aquatic	Environmental → Aquatic	8.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.65%
Freshwater	Environmental → Aquatic → Freshwater	7.69%
Peat	Environmental → Terrestrial → Peat	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Sediment	Environmental → Aquatic → Sediment	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.46%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.69%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_102132852	3300003505	Forest Soil	MHALKLAVDCAWIVFWAYWIASASTSKESVSSGWRTQLSGVSTVGVIVIAVVLRGGSLAVHSVVLGAIGALLF
Ga0062385_110401472	3300004080	Bog Forest Soil	MHPLKLAIGCAWLVFWIYWLASAANSKESVESGWRPRLTGVSAIAVFLVAGVLRGGSLAVHSVILETI
Ga0062387_1015944541	3300004091	Bog Forest Soil	MHPLKLAIGCAWLVFWIYWIASAASSKESVKSGWRPRLTGVSAIAVFLIAGVLRGGSLAVHSVILEAIGAVLFVCGIALAVWARLH
Ga0070700_1005442511	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRGGGLAVRSLILAAIGTALFACGIALAVWAR
Ga0070706_1019279512	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHPLALAVGYAWLVFWIYWLVSAAASKQSVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSLILAAIGAALFACGIAL
Ga0070707_1019500481	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRGGGLAVRSLILAAIGAALFACGIALAVWA
Ga0070699_1020493381	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSLILAAIGAALFACGIALAVWAR
Ga0068853_1007899692	3300005539	Corn Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGL
Ga0070763_102011331	3300005610	Soil	MHPLKLAISWAWLVFWIYWLVSAASSKESVGGGWRTRLTGVSAVGVFVIAGVLRDGSLA
Ga0068851_109374942	3300005834	Corn Rhizosphere	MHPLALAVGYTWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRGGGLAVRSLILAAIGAALFACGIALAVWAR
Ga0075028_1004164591	3300006050	Watersheds	MHPLTLAIGYAWIVFWIYWLVSAASSKESVSGGWRTRLTGVSVVGVFVIAGVLRGGS
Ga0079222_113714142	3300006755	Agricultural Soil	MHPLEIAIGWAWIAFWIYWLVSAAGSKHSVRGGRRRQLAGVSVILVFAIAGALRGGSPAGPGVTLAAAGAVLFA
Ga0075435_1014314012	3300007076	Populus Rhizosphere	MHPLALAVGCAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSLILA
Ga0099827_112237131	3300009090	Vadose Zone Soil	MHPLTLAIGYAWLVFWIYWLVSASASKESVRGGWRTRLTGVSAVGVFVIAGVLRGGSLAV
Ga0105245_129982861	3300009098	Miscanthus Rhizosphere	MHPLALAVGYAWLVFWIYWLVSAAASKQSVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSVI
Ga0105237_114577781	3300009545	Corn Rhizosphere	MHPLALAVGYAWLVFWIYWLVSAAASKQSVRGGWRTRLTGVSAVGVFVIAVVLRGGSLAVHSVILAAIGAALFACG
Ga0126347_11172471	3300010867	Boreal Forest Soil	MHPLEIAIGWAWIAFWIYWLASAASSKHSVRGGRRRQLTGVSVALVFAIAGVLRGGSPAVHSVILAAIGALLFAG
Ga0137372_105451442	3300012350	Vadose Zone Soil	MHPLTLAIGYAWLVFWIYWLVSASTSKESVGGGWRTRLTGVSAVGVFVIAGVLRGGSLAVHSVILAPIGA
Ga0164303_113154181	3300012957	Soil	MHPLALAVGYAWLGFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSLFLAAIGAALFACGI
Ga0164304_100670841	3300012986	Soil	MHPLALAVGYAWLVFWIYWLVSASTSKESVSGGWRTRLTGVSAVGVFVIAVVLRGGSLAVHSVILAAIGAALFACG
Ga0164307_106662141	3300012987	Soil	MHPLTLAIGYAWIVFWIYWLVSAATSKESVRGGWRTRLTSVSAVGVFLIAGVLGG
Ga0157370_119421251	3300013104	Corn Rhizosphere	MHPLALAVGYAWLVFWIYWLVSAAASKQSVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSVILAAIGAVLFACGIALAV
Ga0157372_132701651	3300013307	Corn Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGSLAVHSVILAAI
Ga0157375_107479211	3300013308	Miscanthus Rhizosphere	MHPLALAVGYTWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGGLAVHILILA
Ga0163163_107310822	3300014325	Switchgrass Rhizosphere	MHPLALAVGYTWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRGGGLAVHSLILAAIGAALF
Ga0182024_112674861	3300014501	Permafrost	MQALKLAIGCAWLVFWIYWLASASTSKASVRGGWRTRLTGVSVIAVIVIAGAFGSQGLAVHSVILAAVGAVL
Ga0137412_111988831	3300015242	Vadose Zone Soil	VDPLKLAIGWAWLAFWIYWLASAASGKRSVRRGWRTRLTGVSAVGVFVIAGVLRGGGLAVHSVILAAIGAVLFVGGIALAVW
Ga0132256_1015242182	3300015372	Arabidopsis Rhizosphere	MHPLALAVGYTWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSLIL
Ga0182035_112212432	3300016341	Soil	MDPLKFAIGCAWLVFWIYWIASAAASKQSVPSGWRTRLTGVSAVGVFLIAGVLRGGSLAVHSVILAAIGALLF
Ga0182032_118418122	3300016357	Soil	MDPLKFAIGCAWLVFWIYWIASAAASKQSVPSGWRTRLTGVSAVGVFLIAGVLRGGSLAVHSVILAA
Ga0187807_12491501	3300017926	Freshwater Sediment	MHSLKLAVGIAWLVFWIYWLASAATSKESVRSGWRTRLTGVSAVGVFLIAGVLRGGSLAVHSLILAT
Ga0187807_12780352	3300017926	Freshwater Sediment	MHPLKLAIGCAWLVFWIYWIASASTSKESVRSGWRTRLTGVSAIGVFVIAGVLRGG
Ga0187801_104832931	3300017933	Freshwater Sediment	MHALKLAIGGAWIVFWIYWLASASVSKQSVPGGWRTRLTGVSVVGVFIISGILRGSGLAVHSVI
Ga0187809_102754241	3300017937	Freshwater Sediment	MHALKLAIGCAWIVFWIYWLASASTSKESISGGWRTRLTGVSAIGIFVIAGVLRGGSLAVHSVVLAAIGAVLFACGIA
Ga0187808_103074111	3300017942	Freshwater Sediment	MHALKFVLGCAWLVFWIYWIASAAASKQSVPSGWRTRLTGVSVVGVFLIAGVLRGGSLAVHSVILAAIGALLFACGIALA
Ga0187783_106836301	3300017970	Tropical Peatland	MHALKLVIGCAWLVFWIYWLASASTSKESVASGWRTRLTGVSAVGVFVIAGVLRGGSLAVHSLILGAIGA
Ga0187781_107341041	3300017972	Tropical Peatland	MHALKLAIGCAWIVFWIYWIASASGTKESVPTGWRTRLTGVSAVAVFLIAGVLRGGSLAVPSVILA
Ga0187780_111916461	3300017973	Tropical Peatland	MQPLKIAIGFAWLAFWIYWLASAASSKESISGGWRTRLTGVSAVAVFLIAGVIRGGGLAVHSVILAAIGAVLFACGI
Ga0187777_108615131	3300017974	Tropical Peatland	MHALELAIGCAWLVFWIYWLASASTSKESVSSGWRTRLTGVSVVGVLVIAGVLRGGSLAVHSVILA
Ga0187782_114952371	3300017975	Tropical Peatland	MATLKLVIGFAWILFWIYWLASAATSKESVPGGWRTRLTGVSAIGVFLIAGVIRGAGLAVHSVILAAIGA
Ga0187805_101496832	3300018007	Freshwater Sediment	MHALKLAIGCAWIVFWIYWIVSASSSKESVSSGWRTRLTGVSAVGVFVIAGVLRGGS
Ga0210399_112644571	3300020581	Soil	MASLKFAVGCAWIVFWIYWLASAASSKESVGGGWRTRLTGVSAVGVFVIAGVLRGGALAV
Ga0210401_101053681	3300020583	Soil	MQSLKFAVGCAWIVFWIYWLASAASSKESVGGGWRTRLTGVSAVGVFVIAGVLRGGALAVHSVILEAIGALLF
Ga0210396_110537121	3300021180	Soil	MQGLKLAVGVAWIVFWIYWLASAASSKASVRGGWRTRLTGVSVVAVIVIADAFRGDGLATHSVIMAVIGAV
Ga0210396_115786161	3300021180	Soil	MQALKLAIGIAWIVFWIYWLASAATSKTSVRGGWRTRLTGVSVVAVIVIADAFRGGGLAVHSVILAAIGAALFAGGIAL
Ga0210389_111389892	3300021404	Soil	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSVILAAIGAALFACGIAL
Ga0210387_105216761	3300021405	Soil	MQALKLAIGIAWIVFWIYWLASAATSKTSVRGGWRTRLTGVSVVAVIVIADAFRGGG
Ga0210386_104577883	3300021406	Soil	MHALKLAVGIAWIVFWIYWLASATTSNESVRGGWRTRLTGVSAVGVFVIAGVLRGGSLAVHSLIL
Ga0210391_114476261	3300021433	Soil	MQALKLAIGVAWLVFWIYWLASAATSNASVRGGWRTRLTGVSVVAVIVIADAFRGGGLAVHSLTLAVVGA
Ga0210390_101363053	3300021474	Soil	MQGLKLAVGVAWIVFWIYWLVSASTSKASVRGGWRNRLTGVSVVAVIVIADAFRGDGLATHSVIL
Ga0210390_106090502	3300021474	Soil	MHVLKLAIGVAWLVFWIYWIASASGSKESVPGGWRTRLTGVSAVGVFLIAGVLRGGLAVHSVILGAIGALLFAGGIGL
Ga0210402_117041731	3300021478	Soil	MHPLTIAIGYAWIVFWIYWLVSAAASKQSVRGGWRTRLAGVSAVGVFVIAGVLRGGSLAVHSPVLAAIGAVLF
Ga0126371_130073092	3300021560	Tropical Forest Soil	MHPLEIAIGWAWIAFWIYWLVSAARSKHSVGGGRRRQLAGVSVILVFAIAGALRGGGPAV
Ga0247677_10596101	3300024245	Soil	MHPLALAVGYTWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRGGGLAVRSLILAAI
Ga0247661_10557643	3300024254	Soil	MHPLALAVGYTWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRGGGLAVRSLILAAIGAALFAC
Ga0207642_108512541	3300025899	Miscanthus Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSLILATIGAVLFACGIALAVWA
Ga0207707_110127582	3300025912	Corn Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRG
Ga0207695_113235111	3300025913	Corn Rhizosphere	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGGL
Ga0207695_114255531	3300025913	Corn Rhizosphere	MHPLALAVGYAWLVFWICWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLSVHS
Ga0207693_103302174	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHPLTLAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVRSLILAA
Ga0207700_106240031	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHTLKLVISFAWIAFWIYWLASATNSKESVSGGWRTRLTGVSAVGVFLIAGVLRNGSLAVHSVVLGV
Ga0207664_100641144	3300025929	Agricultural Soil	MHPLEVAIGWAWIAFWIYWLAAAATSKQSVSGGWRTRLTGVSVVGVFVIAGVLRGGSLAVHSVILATAGALLFACGIAL
Ga0207664_117095371	3300025929	Agricultural Soil	MHPLALAVGYAWIAFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSVILAAIGAALF
Ga0207640_114923631	3300025981	Corn Rhizosphere	MHPLALAVGYTWLVFWIYWLVSASTSKESVRGGWRTRLTGVSVVGVFVIAVVLRGGGLAVRSLILAAIGAALFACGIALAVW
Ga0208488_10152702	3300027110	Forest Soil	MHALKLAVDCAWIVFWAYWIASASTSKESVSSGWRTQLSGVSTVGVIVIVVVLRGGSLAVHSVVLGAIGALLFACGIAL
Ga0208827_10498941	3300027641	Peatlands Soil	MDPLKLAIGCAWIVFWIYWLVSAASSKESVRSGWRARLTGVSAVGVFVIAGVLRGGGLAVHSVILAAIGAVLFAS
Ga0307280_101894102	3300028768	Soil	MHPLALAVGYAWIVFWIYWLVSASTSKESIRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSSILATIGA
Ga0307312_108068841	3300028828	Soil	MHPLALAVGYAWIVFWIYWLVSASTSKESIRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSSILATIG
Ga0307308_100323734	3300028884	Soil	MHPLALAVGYAWLVFWIYWLVSASASKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSVILA
Ga0307304_105040162	3300028885	Soil	MHPLALAVGYAWLVFWIYWLVSASTSKESVRGGWRTRLTGVSAVGVFVIAVVLRGGGLAVHSVILAAIGAALFACGIALAIWARL
Ga0311369_111278702	3300029910	Palsa	MHALKLAIGCAWLVFWIYWIASASGSKESVGSGWRTRLTGVSAVGVFVIAGVLR
Ga0311352_104289253	3300029944	Palsa	MHPLKLAIGCAWLVFWSYWIASAASSKESVKSGWRPRLTGVSAIAVFLIAGVLRGGSL
Ga0302178_100359755	3300030013	Palsa	MHPLKLAIGFAWLIFWIYWIASAASSKESVRSGWRPRLTGVSAIGVVLIACAVAAWPCTA
Ga0302311_105066571	3300030739	Palsa	MHALKLAIGCAWLVFWIYWIASASGSKESVGSGWRTRLTGVSAVGVFVIAGVLRGGGLAVHSLILAVIGALLFACGIALAVWA
Ga0302311_109772611	3300030739	Palsa	MHPLKLAIGCAWLVFWSYWIASAASSKESVKSGWRPRLTGVSAIAVFLIAGVLRGGSLAVHSVILEAIGAVLFVCGIALA
Ga0302324_1005076243	3300031236	Palsa	MHPLKLAIGFAWLVFWIYWIASAASSKESVRSGWRPRLTGVSAIGVVLIAGVLR
Ga0302326_105550783	3300031525	Palsa	MHALKLAIGCAWLVFWIYWIASASGSKESVGSGWRTRLTGVSAVGVFVIAGVLRGGGLAVHSLILAVIGALLFACGIALAVW
Ga0302326_126254131	3300031525	Palsa	MHPLMLAVGLAWIVFWVYWLASAARSKESVSGGWRSRLSGVSAVGVFVIAGVLRGGSLAEHNL
Ga0318516_105785991	3300031543	Soil	MGELKFAIGCAWGVFWIYWLVAASRSKESAEGGWRTRLTGVSAVGVFLIAGVLRDPRLAVHSVILAAIGALLFACGIALAVWARGDADD
Ga0318571_102447151	3300031549	Soil	MHSLSLAIGGAWLVFWIYWIASASSSKQSVPSGWRTRLTGVSAVGVFLIAGVLRGGSLAVHSVILA
Ga0318555_107744042	3300031640	Soil	MDALKFAISCAWLAFWIYWLVAASSSKESVGGGWRTGLTSVSVVGVFLIAGVFRGGSLAVHSVILAAVGALLFV
Ga0318542_107834851	3300031668	Soil	MNPLKLAIGYAWLIFWVYWLVSAASSKQSVSGGWRTRLTGVTAVGVFVIAGVLRGGSL
Ga0318574_102668422	3300031680	Soil	MNPLKLAIGYAWLIFWVYWLVSAASSKQSVSGGWRTRLTGVSAVGVFVIAGVLRAGSLAV
Ga0307476_100752311	3300031715	Hardwood Forest Soil	MHPLELAVSCAWIVFWIYWLVSASRSKESVGGGWRTRLTGASAVGVFLIAGVLRNGSLAVHSL
Ga0306918_106471403	3300031744	Soil	MDALKFAISCAWLAFWIYWLVAASSSKESVGGGWRTGLTSVSVVGVFLIAGV
Ga0318498_105033181	3300031778	Soil	MNPLKLAIGYAWLIFWVYWLVSAASSKQSVSGGWRTRLTGVTAVGVFVIAGVLRGGSLAVHSVILSVIGAL
Ga0318547_108519941	3300031781	Soil	MHSLSLAIGGAWLVFWIYWIASASSSKQSVPSGWRTRLTGVSAVGVFLIAGVLRGGSLAV
Ga0318552_102578711	3300031782	Soil	MDALKFAISCAWLAFWMYWLVAASSSKESVGGGWRTGLTSVSVVGVFLIAGVFRGGSLA
Ga0318522_102299001	3300031894	Soil	MDALKFAISCAWLAFWIYWLVAASSSKESVGGGWRTGLTSVSVVGVFLIAGVLRGGSLAVHS
Ga0318551_107641591	3300031896	Soil	MDPLKFAIGCAWLVFWIYWIASAAASKQSVPSGWRTRLTGVSAVGVFLIAGVLRGGSLAVHSVILAAIGALLFAC
Ga0307479_102615181	3300031962	Hardwood Forest Soil	MHTLKLAIGYAWLVFWIYWLVSAARSKESISGGWRTRIAGVSAVGVLLIVGVLR
Ga0318562_107728961	3300032008	Soil	MHALKLAIGGAWIVFWIYWLASASVSKQSVPGGWRTRLTGVSVVGVFVISGVLRGSGLAV
Ga0318556_106962962	3300032043	Soil	MEALKFAISCAWLAFWIYWLVAASSSKESVGGGWRTGLTSVSVVGVFLIAGVLRGGSLA
Ga0318524_102669642	3300032067	Soil	MHALNLVIGCAWLLFWIYWLASASTSKESVPSGWRTRLTAISVVGVFLIAGVLHDGSLAVHSVILAAIGVL
Ga0318524_104949693	3300032067	Soil	MHALKLVIGSAWIIFWIYWLASASISKESVPSGWRTRLAGASVIGVFLIAGVLH
Ga0318553_103381381	3300032068	Soil	MNPLKLAIGYAWLIFWVYWLVSAASSKQSVSGGWRTRLTGVTAVGVFVIAGVLRGGSLAV
Ga0335078_111648461	3300032805	Soil	MHPLELAISCAWLVFWIYWLVSASTSKQSVPGGWRTRLTGVSVVGVFVIAGVLRRGGLAVHSPVLAAVGALLFACGIALA
Ga0335078_117181811	3300032805	Soil	MHPLELAIGYAWLVFWIYWLVSASTSKHSVPGGWRTRLTGVSAVGVFVIAGVLRRGSVAVHSPVLAAIGALLFACGI
Ga0335078_117849611	3300032805	Soil	MRALKLAVGCAWLVFWIYWLASAATSKESVPGGWRSRLTGVSAVGVFLIAGVLRSS
Ga0335074_109009832	3300032895	Soil	MHALKIVIGGAWIVFWIYWLASASTSKESVSGGWRTRLTGVSAIGVFVIAGVLRGGGLAVHS
Ga0335075_103635081	3300032896	Soil	MHALKIAIGVAWLVFWFYWITSASTSKESVRSGWRGRLTGVSVAGVFVIAVVLRGGSLAVHSVILG
Ga0335075_107126341	3300032896	Soil	VHALKLAISGGWIVFWIYWLASASVSKESVGGGWRTRLTGVSAVGVFLIAGVLRGGGLAVHDVVLEV
Ga0335073_103194391	3300033134	Soil	MHPLTLAIGYAWIIFWIYWLVSAAASKQSVSGGWRTRLTGVSVIGVFLIAGVLRRGGLAEHSVILAAIGAL
Ga0335077_114831132	3300033158	Soil	MNALKFAIGCAWIVFWLYWLAASATSKESVSGGWRPRLAGVSVAGVFVISFVLRRGSLVVHSVVLGATGAVVFAAGIAL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097081

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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