Metagenome Family F097085

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097085
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	45 residues
Representative Sequence	SSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Number of Associated Samples	66
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.269 % of family members)
Environment Ontology (ENVO)	Unclassified (59.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 33.33% Coil/Unstructured: 52.38%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00171	Aldedh	9.62
PF05988	DUF899	4.81
PF01436	NHL	3.85
PF00106	adh_short	0.96
PF06224	HTH_42	0.96
PF03816	LytR_cpsA_psr	0.96
PF08281	Sigma70_r4_2	0.96
PF01243	Putative_PNPOx	0.96
PF07992	Pyr_redox_2	0.96
PF13305	TetR_C_33	0.96
PF00872	Transposase_mut	0.96
PF03446	NAD_binding_2	0.96
PF00067	p450	0.96
PF13655	RVT_N	0.96
PF13560	HTH_31	0.96
PF13649	Methyltransf_25	0.96
PF02518	HATPase_c	0.96
PF08240	ADH_N	0.96
PF01568	Molydop_binding	0.96
PF01266	DAO	0.96
PF13411	MerR_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	9.62
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	9.62
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	9.62
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	4.81
COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2124	Cytochrome P450	Defense mechanisms [V]	0.96
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.96
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.92 %
Unclassified	root	N/A	48.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.88 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.96 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	1.92 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.96 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.96 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	1.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.96 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Catenulispora rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora rubra	1.92 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.96 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.96 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Catenulispora rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora rubra	1.92 %
Streptomyces sp. DvalAA-14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. DvalAA-14	0.96 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.96 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.96 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573002\|GZIGXIF01CLL7S	All Organisms → cellular organisms → Bacteria → Terrabacteria group	509	Open in IMG/M
3300005471\|Ga0070698_102211114	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005764\|Ga0066903_100219151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2881	Open in IMG/M
3300005764\|Ga0066903_103800734	Not Available	811	Open in IMG/M
3300005764\|Ga0066903_105505198	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005764\|Ga0066903_107272396	Not Available	573	Open in IMG/M
3300005764\|Ga0066903_107674255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300005764\|Ga0066903_109060134	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300006755\|Ga0079222_11016140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300006804\|Ga0079221_11212720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	587	Open in IMG/M
3300006871\|Ga0075434_101648279	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300006904\|Ga0075424_100598122	Not Available	1178	Open in IMG/M
3300010043\|Ga0126380_10182740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1384	Open in IMG/M
3300010048\|Ga0126373_10033960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4434	Open in IMG/M
3300010048\|Ga0126373_10082624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2933	Open in IMG/M
3300010048\|Ga0126373_10141134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2279	Open in IMG/M
3300010048\|Ga0126373_10659588	Not Available	1102	Open in IMG/M
3300010048\|Ga0126373_11175078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300010048\|Ga0126373_11755232	Not Available	684	Open in IMG/M
3300010358\|Ga0126370_10747954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300010358\|Ga0126370_11077248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300010358\|Ga0126370_11131907	Not Available	723	Open in IMG/M
3300010360\|Ga0126372_10376341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300010361\|Ga0126378_10128329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2552	Open in IMG/M
3300010361\|Ga0126378_10474546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1366	Open in IMG/M
3300010361\|Ga0126378_10508128	Not Available	1320	Open in IMG/M
3300010361\|Ga0126378_11645470	Not Available	729	Open in IMG/M
3300010361\|Ga0126378_11791769	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300010366\|Ga0126379_10399789	Not Available	1421	Open in IMG/M
3300010366\|Ga0126379_10735357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora rubra	1082	Open in IMG/M
3300010366\|Ga0126379_11838525	Not Available	709	Open in IMG/M
3300010376\|Ga0126381_102943361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300011270\|Ga0137391_10366066	Not Available	1237	Open in IMG/M
3300012971\|Ga0126369_11873819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora rubra	688	Open in IMG/M
3300012971\|Ga0126369_12795402	Not Available	571	Open in IMG/M
3300016294\|Ga0182041_11568603	Not Available	607	Open in IMG/M
3300016319\|Ga0182033_10663130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	911	Open in IMG/M
3300016319\|Ga0182033_11323728	Not Available	647	Open in IMG/M
3300016404\|Ga0182037_10641444	Not Available	905	Open in IMG/M
3300016404\|Ga0182037_10746230	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300016404\|Ga0182037_10781106	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300016422\|Ga0182039_10545376	Not Available	1007	Open in IMG/M
3300021374\|Ga0213881_10317003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. DvalAA-14	697	Open in IMG/M
3300021560\|Ga0126371_10027326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5311	Open in IMG/M
3300021560\|Ga0126371_10129436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2561	Open in IMG/M
3300021560\|Ga0126371_11204411	Not Available	894	Open in IMG/M
3300021560\|Ga0126371_13090593	Not Available	563	Open in IMG/M
3300025910\|Ga0207684_10390617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1196	Open in IMG/M
3300031231\|Ga0170824_103647426	Not Available	545	Open in IMG/M
3300031543\|Ga0318516_10165854	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300031546\|Ga0318538_10422745	Not Available	721	Open in IMG/M
3300031549\|Ga0318571_10340468	Not Available	573	Open in IMG/M
3300031564\|Ga0318573_10084297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1610	Open in IMG/M
3300031573\|Ga0310915_10671152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300031640\|Ga0318555_10347244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300031668\|Ga0318542_10701404	Not Available	529	Open in IMG/M
3300031679\|Ga0318561_10534995	Not Available	645	Open in IMG/M
3300031680\|Ga0318574_10019798	All Organisms → cellular organisms → Bacteria	3257	Open in IMG/M
3300031680\|Ga0318574_10319192	Not Available	904	Open in IMG/M
3300031680\|Ga0318574_10404688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300031681\|Ga0318572_10831684	Not Available	549	Open in IMG/M
3300031719\|Ga0306917_10764118	Not Available	758	Open in IMG/M
3300031724\|Ga0318500_10225278	Not Available	904	Open in IMG/M
3300031724\|Ga0318500_10354127	Not Available	725	Open in IMG/M
3300031744\|Ga0306918_10260122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300031765\|Ga0318554_10546979	Not Available	654	Open in IMG/M
3300031770\|Ga0318521_10306405	Not Available	936	Open in IMG/M
3300031779\|Ga0318566_10348301	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031782\|Ga0318552_10135732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1231	Open in IMG/M
3300031794\|Ga0318503_10250279	Not Available	575	Open in IMG/M
3300031798\|Ga0318523_10486161	Not Available	611	Open in IMG/M
3300031805\|Ga0318497_10288452	Not Available	913	Open in IMG/M
3300031805\|Ga0318497_10347098	Not Available	829	Open in IMG/M
3300031805\|Ga0318497_10775472	All Organisms → cellular organisms → Bacteria → Terrabacteria group	537	Open in IMG/M
3300031821\|Ga0318567_10750691	All Organisms → cellular organisms → Bacteria → Terrabacteria group	553	Open in IMG/M
3300031831\|Ga0318564_10458026	All Organisms → cellular organisms → Bacteria → Terrabacteria group	555	Open in IMG/M
3300031845\|Ga0318511_10117735	Not Available	1142	Open in IMG/M
3300031859\|Ga0318527_10386798	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031879\|Ga0306919_10898734	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031893\|Ga0318536_10123958	Not Available	1306	Open in IMG/M
3300031896\|Ga0318551_10023875	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300031910\|Ga0306923_10980617	Not Available	920	Open in IMG/M
3300031945\|Ga0310913_10362915	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300031946\|Ga0310910_11064300	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300031981\|Ga0318531_10535183	Not Available	531	Open in IMG/M
3300032001\|Ga0306922_11178446	Not Available	781	Open in IMG/M
3300032008\|Ga0318562_10326101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	892	Open in IMG/M
3300032008\|Ga0318562_10407494	Not Available	790	Open in IMG/M
3300032035\|Ga0310911_10241335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1033	Open in IMG/M
3300032035\|Ga0310911_10621211	Not Available	627	Open in IMG/M
3300032043\|Ga0318556_10003338	All Organisms → cellular organisms → Bacteria	5853	Open in IMG/M
3300032043\|Ga0318556_10457940	Not Available	667	Open in IMG/M
3300032043\|Ga0318556_10759691	Not Available	504	Open in IMG/M
3300032052\|Ga0318506_10121500	Not Available	1130	Open in IMG/M
3300032054\|Ga0318570_10596340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	504	Open in IMG/M
3300032065\|Ga0318513_10645415	All Organisms → cellular organisms → Bacteria → Terrabacteria group	518	Open in IMG/M
3300032066\|Ga0318514_10733457	Not Available	525	Open in IMG/M
3300032066\|Ga0318514_10797517	Not Available	502	Open in IMG/M
3300032076\|Ga0306924_12359869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300032261\|Ga0306920_101699836	Not Available	894	Open in IMG/M
3300032261\|Ga0306920_102699200	Not Available	679	Open in IMG/M
3300032261\|Ga0306920_102997078	Not Available	637	Open in IMG/M
3300032261\|Ga0306920_103256957	All Organisms → cellular organisms → Bacteria → Terrabacteria group	606	Open in IMG/M
3300033289\|Ga0310914_10647763	Not Available	950	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.08%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.42%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE1_04709350	2189573002	Grass Soil	VADNGGGTMSAITLSSGTVNTLVTGVKAAQGLAMQADGTFLIVDESSGDIRVATGC
Ga0070698_1022111142	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAMGC*
Ga0066903_1002191511	3300005764	Tropical Forest Soil	LVTGIKAAQGLAMRADGTFLLANQQSGDIRVATGC*
Ga0066903_1038007342	3300005764	Tropical Forest Soil	SSGTVHTLVTGIKAAQGLAMRADGTFLLANQQSGDIRVARGC*
Ga0066903_1055051981	3300005764	Tropical Forest Soil	VTGVKAAQGLVMRADGTFLVTDEKSGDIRVATGC*
Ga0066903_1072723961	3300005764	Tropical Forest Soil	VTGVKAAQGLAMRADGTFLLANQQSGDIRVATGC*
Ga0066903_1076742551	3300005764	Tropical Forest Soil	TLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAMGC*
Ga0066903_1090601341	3300005764	Tropical Forest Soil	TTLVTGVNGAQGLAMRADGTFLVVDEKSGDIRVATGC*
Ga0079222_110161402	3300006755	Agricultural Soil	LASGTVTTLVTGVKAAQGLAIQADGTFLVTDEKSGDIRVATGC*
Ga0079221_112127203	3300006804	Agricultural Soil	VTGVKAAQGLAMRADGTFLVVDEKSGDIRVAMGC*
Ga0075434_1016482791	3300006871	Populus Rhizosphere	VNTLVTGVKAAQGLAMRADGTFLVVDESSGDIRVATGC*
Ga0075424_1005981222	3300006904	Populus Rhizosphere	LVTGVKAAQGLALRADGTFLIVDEKSGDIRVATGC*
Ga0126380_101827401	3300010043	Tropical Forest Soil	LSSGTANILVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC*
Ga0126373_100339603	3300010048	Tropical Forest Soil	LSSGTVTTLVTGVKAAQGLVMRADGTFLVTDERSGDIRVAMGC*
Ga0126373_100826243	3300010048	Tropical Forest Soil	GAVNTLVTGVTTAQGLAMRADGTFLVVDETSGNIRIATGC*
Ga0126373_101411341	3300010048	Tropical Forest Soil	NGGGTMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC*
Ga0126373_106595882	3300010048	Tropical Forest Soil	LPSGTVTTLVTGVKAAQGLAMRADGTFLVADESSGDIRVATGC*
Ga0126373_111750781	3300010048	Tropical Forest Soil	HGADNGGGTMSAITLSSGTVNTLVTGVNAAQGLAMRADGTFLVVDETPGDIRVAMGC*
Ga0126373_117552321	3300010048	Tropical Forest Soil	SSGTVSTLVTGVKAAQGLAMRPDGTFLVVDETSGDIRVAMGC*
Ga0126370_107479541	3300010358	Tropical Forest Soil	TLVTGVKAAQGLAMRADGTFLLADEKSGDIRVAMGC*
Ga0126370_110772481	3300010358	Tropical Forest Soil	TLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAMGC*
Ga0126370_111319072	3300010358	Tropical Forest Soil	AYVADIGGGTMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDESSGDIRVATGC*
Ga0126372_103763413	3300010360	Tropical Forest Soil	SSGTVTTLVTGVKAAQGLVMRADGTFLIVDETSGDIRVATGC*
Ga0126378_101283291	3300010361	Tropical Forest Soil	GGGTMSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAAGC*
Ga0126378_104745461	3300010361	Tropical Forest Soil	NGGGTMSAVTLSSGTVSTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC*
Ga0126378_105081281	3300010361	Tropical Forest Soil	MSAVTLASGAVTPLVTGVNGAQGLAMRADGTFLVVDEKSGDIRVATGC*
Ga0126378_116454701	3300010361	Tropical Forest Soil	VNTLVTGVKAAQGLAMRADGTFLVVDETSGDIRVAMGC*
Ga0126378_117917692	3300010361	Tropical Forest Soil	GGGTMSAVTLSTGAVNTLVTGVKAPQGLAMRADGTFLLVDEKSGDIRIAGGC*
Ga0126379_103997891	3300010366	Tropical Forest Soil	VSNGIAHGADNGGGTMSAITLSSGTVNTLVTGVNAAQGLAMRADGTFLVVDETPGDIRVAMGC*
Ga0126379_107353571	3300010366	Tropical Forest Soil	LSSGRVHTLVTGIKAAQGLAMRADGTFLLANQQSGDIRVARGC*
Ga0126379_118385252	3300010366	Tropical Forest Soil	LSSGRVHTLVTGIKAAQGLAMRADGTFLLANQQSGDIRVATGC*
Ga0126381_1029433611	3300010376	Tropical Forest Soil	NTLVTGVKAAQGLAMRADGTFLIVDEKSGDIRVATGC*
Ga0137391_103660662	3300011270	Vadose Zone Soil	FRNGVAYVADNGGGTMSAITLSSGTVSTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAVGC*
Ga0126369_118738192	3300012971	Tropical Forest Soil	MSAVTLSSGRVHTLVTGIKAAQGLAMRTDGTFLLANQQSGDIRVARGC*
Ga0126369_127954021	3300012971	Tropical Forest Soil	YVADNGGGTMSAVTLSSGTVSTLVTGVKAAQGLAMRADGTFLVVDETSGDIRVAVGC*
Ga0182041_115686031	3300016294	Soil	VADNGGGTMSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0182033_106631302	3300016319	Soil	DNGGGTMSAVTLASGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0182033_113237281	3300016319	Soil	SSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0182037_106414441	3300016404	Soil	SSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0182037_107462302	3300016404	Soil	SSGSVNTLVTGVQGAQGLAMRADGTFLVVDEKSGDVRVAAGC
Ga0182037_107811062	3300016404	Soil	AYVADNGGGTMSAVTLSSGTVSTLVTGVTGAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0182039_105453761	3300016422	Soil	VTTLVTGVKAAQGLTMRADGTFLVVDEKTGDIRVATGC
Ga0213881_103170032	3300021374	Exposed Rock	VADNGNATFSAVTLSTGAVTTLVTDVIEAQGLAMRSDGSFLVVSEATGDIRIATGC
Ga0126371_100273261	3300021560	Tropical Forest Soil	TMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDESSGDIRVATGC
Ga0126371_101294361	3300021560	Tropical Forest Soil	MSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0126371_112044111	3300021560	Tropical Forest Soil	TTLVTGVKAAQGLAMRADGTFLVTDEKSGDIRVATGC
Ga0126371_130905931	3300021560	Tropical Forest Soil	MSAITLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAAGC
Ga0207684_103906171	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TLVTGIKDAQGLAMRADGTFLVVDESSGDIRVATGC
Ga0170824_1036474262	3300031231	Forest Soil	DNGGGTMSAITLSSGTVNTLITGVNAAQGLAMRPDGTFLVVDEKSGDIRVAMGC
Ga0318516_101658542	3300031543	Soil	GGTMSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0318538_104227451	3300031546	Soil	TLVTGVKAAQGLAMRADGTFLIVDEKTGDIRVATGC
Ga0318571_103404682	3300031549	Soil	VTLSSGAVSTLVTGVKGAQGLAMRADGTFLVVDEKSGDIRVAMGC
Ga0318573_100842971	3300031564	Soil	TLVTGVTGAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0310915_106711522	3300031573	Soil	TLVTGVNGAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0318555_103472441	3300031640	Soil	TLVTGVKAAQGLAMQADGTFLVVDEKSGDIRVATGC
Ga0318542_107014041	3300031668	Soil	YVADNGGGTMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAMGC
Ga0318561_105349951	3300031679	Soil	NGGGTMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0318574_100197984	3300031680	Soil	YVADNGGGTMSAVTLSSGTVTTLVTGVSGAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0318574_103191921	3300031680	Soil	ADNGGGTMSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0318574_104046881	3300031680	Soil	NTLVTGVKAAQGLAMRADGTFLVVDQKSGDIRVAMGC
Ga0318572_108316842	3300031681	Soil	AYVADFGGRTMSAVTLSSGTVHTLVTGIKAAQGLAMRADGTFLLANQQSGDIRIARGC
Ga0306917_107641181	3300031719	Soil	SGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0318500_102252782	3300031724	Soil	GTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0318500_103541271	3300031724	Soil	MSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0306918_102601223	3300031744	Soil	VTLSSGTVHTLVTGIKAAQGLAMRADGTFLLANQQSGDIRIARGC
Ga0318554_105469791	3300031765	Soil	AYVADNGGGTMSAVTLSSGAVSTLVTGVKGAQGLAMRADGTFLVVDEKSGDIRVAMGC
Ga0318521_103064052	3300031770	Soil	MSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLIVDEKTGDIRVATGC
Ga0318566_103483012	3300031779	Soil	GTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0318552_101357322	3300031782	Soil	GTMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDQKSGDIRVAMGC
Ga0318503_102502791	3300031794	Soil	RNGVAYVADNGGGTMSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0318523_104861611	3300031798	Soil	TLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0318497_102884522	3300031805	Soil	GNAVADNGGGTMSAVTLSSGAVSTLVTGVKGAQGLAMRADGTFLVVDEKSGDIRVAMGC
Ga0318497_103470982	3300031805	Soil	LSSGTVNTLVTGVKAAQGLAMRADGTFLIVDEKTGDIRVATGC
Ga0318497_107754721	3300031805	Soil	SSGTVNTLVTGVKAAQGLAMRADGTFLVVDQKSGDIRVAMGC
Ga0318567_107506911	3300031821	Soil	SSGAVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIAAGC
Ga0318564_104580262	3300031831	Soil	MSAVTLSSGAVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIAAGC
Ga0318511_101177351	3300031845	Soil	GTMSAITLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0318527_103867981	3300031859	Soil	LSSGTVNTLVTGVQGAQGLAMRADGTFLVVDEKSGDIRVAAGC
Ga0306919_108987342	3300031879	Soil	GVAYVADNGGGTMSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0318536_101239582	3300031893	Soil	LSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0318551_100238751	3300031896	Soil	TLVTGIKAAQGLAMRADGTFLLANQQSGDIRIARGC
Ga0306923_109806171	3300031910	Soil	VNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0310913_103629151	3300031945	Soil	MSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0310910_110643001	3300031946	Soil	TLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIAAGC
Ga0318531_105351831	3300031981	Soil	VTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0306922_111784461	3300032001	Soil	ADNGGGTMSAVTLSSGTVSTLVTGVTGAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0318562_103261012	3300032008	Soil	VNTLVTGVKAAQGLAMRADGTFLVVDQKSGDIRVAMGC
Ga0318562_104074941	3300032008	Soil	GGTMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0310911_102413352	3300032035	Soil	AVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDQKSGDIRVAMGC
Ga0310911_106212111	3300032035	Soil	LVTGVKAAQGLAMRADGTFLIVDEKSGDIRVATGC
Ga0318556_100033387	3300032043	Soil	LSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIATGC
Ga0318556_104579401	3300032043	Soil	STLVTGVTGAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0318556_107596912	3300032043	Soil	LSSGTVSTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0318506_101215001	3300032052	Soil	AVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC
Ga0318570_105963401	3300032054	Soil	AVTMSSGTVNTLVTGVKAAQGLAMRADGTLLVVDEKSGDIRIATGC
Ga0318513_106454152	3300032065	Soil	TLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDQKSGDIRVAMGC
Ga0318514_107334571	3300032066	Soil	VNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVAMGC
Ga0318514_107975171	3300032066	Soil	MSAVTLSSGTVNTLVTGVTGAQGLAMRADGTFLVVDEKSGDIRVATGC
Ga0306924_123598692	3300032076	Soil	SAVTLSSGTVTTLVTGVNGAQGLAMRADGTFLIVDEKSGDIRVATGC
Ga0306920_1016998361	3300032261	Soil	SAVTLSSGAVNTLVTGVKGAQGLAMRANGTFLIVDEKSGDIRVAMGC
Ga0306920_1026992001	3300032261	Soil	TMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLIVDEKTGDIRVATGC
Ga0306920_1029970781	3300032261	Soil	TMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLIVDEKSGDIRVATGC
Ga0306920_1032569571	3300032261	Soil	TMSAVTLSSGTVTTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRIAAGC
Ga0310914_106477631	3300033289	Soil	YVADNGGGTMSAVTLSSGTVNTLVTGVKAAQGLAMRADGTFLVVDEKSGDIRVALGC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097085

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences