Metagenome / Metatranscriptome Family F097096

Basic Information
Family ID	F097096
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	PVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Number of Associated Samples	83
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	98.08 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (98.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.731 % of family members)
Environment Ontology (ENVO)	Unclassified (42.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.885 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.36% β-sheet: 22.73% Coil/Unstructured: 65.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07811	TadE	86.54
PF04392	ABC_sub_bind	2.88
PF13701	DDE_Tnp_1_4	0.96
PF12697	Abhydrolase_6	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.15 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	95.19 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	64.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.92 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.42 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.73 %
Unclassified	root	N/A	1.92 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.42 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	7.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.73 %
Unclassified	root	N/A	1.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.42 %
Methylobacterium nodulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	7.69 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	5.77 %
Unclassified	root	N/A	1.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.42 %
Methylobacterium nodulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	7.69 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	5.77 %
Unclassified	root	N/A	1.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10075709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	848	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1064038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10038186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	1106	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1027710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	899	Open in IMG/M
3300005363\|Ga0008090_15598411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300005447\|Ga0066689_10444812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	813	Open in IMG/M
3300005558\|Ga0066698_10183176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1428	Open in IMG/M
3300005558\|Ga0066698_10273746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1168	Open in IMG/M
3300005598\|Ga0066706_10677198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	819	Open in IMG/M
3300005614\|Ga0068856_101405558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300005713\|Ga0066905_102275062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300005764\|Ga0066903_100260467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2690	Open in IMG/M
3300005764\|Ga0066903_101524043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1263	Open in IMG/M
3300005764\|Ga0066903_106341195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300005764\|Ga0066903_106372138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300005764\|Ga0066903_107582121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300006028\|Ga0070717_10472538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1132	Open in IMG/M
3300006034\|Ga0066656_10849793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300006046\|Ga0066652_101491831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300006755\|Ga0079222_10387975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	965	Open in IMG/M
3300006852\|Ga0075433_10950791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300006853\|Ga0075420_101520651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300006854\|Ga0075425_100617585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1247	Open in IMG/M
3300007076\|Ga0075435_101501088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300009012\|Ga0066710_103756351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300009137\|Ga0066709_101624310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300009143\|Ga0099792_10487681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300009143\|Ga0099792_11059238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300009156\|Ga0111538_10186962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2630	Open in IMG/M
3300009839\|Ga0116223_10352889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300010043\|Ga0126380_10173354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1412	Open in IMG/M
3300010047\|Ga0126382_10789359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	808	Open in IMG/M
3300010047\|Ga0126382_11368335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300010335\|Ga0134063_10099578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1318	Open in IMG/M
3300010358\|Ga0126370_10944223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300010358\|Ga0126370_11888844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300010359\|Ga0126376_12549815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300010360\|Ga0126372_11392067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	734	Open in IMG/M
3300010361\|Ga0126378_10498516	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300010376\|Ga0126381_104130319	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010398\|Ga0126383_12967099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300012209\|Ga0137379_11000366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300012356\|Ga0137371_10669871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300012361\|Ga0137360_10805841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300012930\|Ga0137407_11010577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300012971\|Ga0126369_11064436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	897	Open in IMG/M
3300012971\|Ga0126369_11248973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	833	Open in IMG/M
3300012971\|Ga0126369_13257593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300013503\|Ga0120127_10163591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300015371\|Ga0132258_12475998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1299	Open in IMG/M
3300016294\|Ga0182041_11249396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300016341\|Ga0182035_10169639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1697	Open in IMG/M
3300016371\|Ga0182034_10586381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	939	Open in IMG/M
3300016387\|Ga0182040_10328404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1179	Open in IMG/M
3300016387\|Ga0182040_11286817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300016445\|Ga0182038_11275948	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300020579\|Ga0210407_11135366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300021560\|Ga0126371_11643268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300021560\|Ga0126371_12455826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300021560\|Ga0126371_12740913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300021560\|Ga0126371_13007418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300021560\|Ga0126371_13682477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300025939\|Ga0207665_10527236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300026088\|Ga0207641_10618574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	1062	Open in IMG/M
3300026309\|Ga0209055_1155163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300031544\|Ga0318534_10788101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300031546\|Ga0318538_10433612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031564\|Ga0318573_10283354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	886	Open in IMG/M
3300031713\|Ga0318496_10631568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300031723\|Ga0318493_10170624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1136	Open in IMG/M
3300031724\|Ga0318500_10598520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031736\|Ga0318501_10774473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300031744\|Ga0306918_10774660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300031763\|Ga0318537_10324519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300031764\|Ga0318535_10450243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031769\|Ga0318526_10127509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	1028	Open in IMG/M
3300031771\|Ga0318546_10239301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1247	Open in IMG/M
3300031793\|Ga0318548_10293101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300031794\|Ga0318503_10240980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300031797\|Ga0318550_10319960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300031821\|Ga0318567_10290538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	921	Open in IMG/M
3300031821\|Ga0318567_10774094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300031833\|Ga0310917_10662545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300031833\|Ga0310917_10694104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300031879\|Ga0306919_10277201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1267	Open in IMG/M
3300031879\|Ga0306919_10843074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300031879\|Ga0306919_11424996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031893\|Ga0318536_10622174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300031897\|Ga0318520_10182258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1232	Open in IMG/M
3300031897\|Ga0318520_10218693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1129	Open in IMG/M
3300031897\|Ga0318520_10640042	Not Available	662	Open in IMG/M
3300031910\|Ga0306923_10998160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	909	Open in IMG/M
3300031942\|Ga0310916_10695700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	860	Open in IMG/M
3300031947\|Ga0310909_11621701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300032025\|Ga0318507_10312542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300032041\|Ga0318549_10277861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300032044\|Ga0318558_10536672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300032054\|Ga0318570_10143804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300032055\|Ga0318575_10580694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300032066\|Ga0318514_10622340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300032068\|Ga0318553_10137718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1260	Open in IMG/M
3300032174\|Ga0307470_11860176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300032261\|Ga0306920_100424115	Not Available	1977	Open in IMG/M
3300033289\|Ga0310914_10431593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.31%
Host-Associated	Host-Associated	7.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Plants	Host-Associated → Plants	7.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.62%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100757093	3300000597	Forest Soil	FFLTLPLQRSQTDLYVELVGLVQPGDGVSFDVVQLYR*
AF_2010_repII_A100DRAFT_10640381	3300000655	Forest Soil	PVAAFGKFFLTLPLGRSQTDLYVEMVGLVRPGDGVSYDVVQLYR*
AF_2010_repII_A001DRAFT_100381861	3300000793	Forest Soil	KFFLTLPLGRSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
AP72_2010_repI_A001DRAFT_10277103	3300000893	Forest Soil	QAHVPVAAFGKFFLTLPLQQSQTDLYVELVGLVQPGDGVSFDVVQLYR*
Ga0008090_155984112	3300005363	Tropical Rainforest Soil	GKFFLTLPLARAQTDLYVEMVGLVRPGDGVSYDVVQLYR*
Ga0066689_104448123	3300005447	Soil	QSNIPVAAFGKLFLTLPLAQSQTDLYVELVGLVQPGDGVSYDVVQLYR*
Ga0066698_101831761	3300005558	Soil	AFGKFFLTLPLARAQTDLYVEMVGLVRPGDGVSYDVVQLYR*
Ga0066698_102737463	3300005558	Soil	AFGKLFLTLPLQRSQTDLYAELIGLVKPGDDGNFDMVQLYR*
Ga0066706_106771983	3300005598	Soil	TLPLAQSQTDLYVELVGLVQPGDGVSYDVVQLYR*
Ga0068856_1014055581	3300005614	Corn Rhizosphere	FLTLPLQRSQTDLYVEALGFVTPGDIVNYDMVQLYR*
Ga0066905_1022750621	3300005713	Tropical Forest Soil	AAFGKLFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR*
Ga0066903_1002604671	3300005764	Tropical Forest Soil	TQSDIPVAAFGKFFLTLPLSRSQTDLYVELVGLVRPGDGVSYDVVQLYR*
Ga0066903_1015240431	3300005764	Tropical Forest Soil	QFNVPVAAFGKLFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR*
Ga0066903_1063411951	3300005764	Tropical Forest Soil	QSNVPVAAFGKLFLTLPLSRSQTDLYVEMAGLVQPGDGVSFDVVQLYR*
Ga0066903_1063721381	3300005764	Tropical Forest Soil	PVAAFGKFFLTLPLAPAQSDLYVEMIGLVRPGDGVSFDVIQLYR*
Ga0066903_1075821211	3300005764	Tropical Forest Soil	PVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSYDVVQLYR*
Ga0070717_104725381	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FLTLPLARSQTDLYVELVGLVRPGDGVSYDVVQLYR*
Ga0066656_108497932	3300006034	Soil	FLTLPLAQSQTDLYVELVGLVRPGDGVSFDVVQLYR*
Ga0066652_1014918312	3300006046	Soil	VAAFGKFFLTLPLSRAQTDLYVELVGLVRPGDGVSYDVVQLYR*
Ga0079222_103879753	3300006755	Agricultural Soil	PVAAFGKLFLTLPLGRSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0075433_109507913	3300006852	Populus Rhizosphere	FLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0075420_1015206511	3300006853	Populus Rhizosphere	PVAAFGKFFLTLPLARAQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0075425_1006175853	3300006854	Populus Rhizosphere	AAFGKLFLTLPLAQSQTDLYVELVGLVRPGDGVSFDVVQLYR*
Ga0075435_1015010882	3300007076	Populus Rhizosphere	KFFLTLPLAHAQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0066710_1037563511	3300009012	Grasslands Soil	VAAFGKFFLTLPLSRAQTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0066709_1016243103	3300009137	Grasslands Soil	LDGEAQSNVPVAAFSKFFLTLPLTRAQTDLYVEMVGLVRPGDGVSYDVVQLYR*
Ga0099792_104876811	3300009143	Vadose Zone Soil	TVPVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0099792_110592381	3300009143	Vadose Zone Soil	TLPLARSQTDLYVEPVALVRPGDPVNFDLVQLYR*
Ga0111538_101869621	3300009156	Populus Rhizosphere	PVAAFGKFFLTLPLAHAQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0116223_103528891	3300009839	Peatlands Soil	NLSRGESAMTNIPVAAFGKFFLTLPLMPSQTDLYVEIVGLVVPGDGTPDFETVQLYR*
Ga0126380_101733543	3300010043	Tropical Forest Soil	AFAKLFLTLPLQPSQTDLYVELNGLVKPGDGSNFDMVQLYR*
Ga0126382_107893591	3300010047	Tropical Forest Soil	PVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0126382_113683351	3300010047	Tropical Forest Soil	LFLTLPLGRSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0134063_100995783	3300010335	Grasslands Soil	GKFFLTLPLARAQTDLYVEMVGLVRPGDGVSYDVVQLFR*
Ga0126370_109442233	3300010358	Tropical Forest Soil	PSMDDTQASVPVAAFGKFFLTLPLQQSQTDLYVELVGLVQPGDGVSFDVVQLYR*
Ga0126370_118888442	3300010358	Tropical Forest Soil	AFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR*
Ga0126376_125498152	3300010359	Tropical Forest Soil	NVPVVAFGKFFLTLPLGRSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0126372_113920673	3300010360	Tropical Forest Soil	FLTLPLQGSQTDLYAELIGLVKPGDDSNFEMVQLYR*
Ga0126378_104985164	3300010361	Tropical Forest Soil	FAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR*
Ga0126381_1041303191	3300010376	Tropical Forest Soil	LFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR*
Ga0126383_129670992	3300010398	Tropical Forest Soil	VAAFGKFFLTLPLAQSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0137379_110003661	3300012209	Vadose Zone Soil	PVAAFGKFFLTLPLARAQTDLYVEMVGLVRPGDGVSYDVVQLYR*
Ga0137371_106698713	3300012356	Vadose Zone Soil	AFGKFFLTLPLVRGQTDLYVEMVGLVRPGDGVSYDVVQLYR*
Ga0137360_108058411	3300012361	Vadose Zone Soil	QYNVPVADFSNPLLTLPSAQSQTDLYVELVGLVRPGDGVSFDVVQLYR*
Ga0137407_110105771	3300012930	Vadose Zone Soil	VAAFGKLFLTLPLPQSQTDLYVELVGLVQPGDGVSYDVVQLYR*
Ga0126369_110644361	3300012971	Tropical Forest Soil	FLTLPLQQSQTDLYVELVGLVQPGDGVSFDVVQLYR*
Ga0126369_112489731	3300012971	Tropical Forest Soil	NVPVAAFGKLFLTLPLSRSQTDLYVEMAGLVQPGDGVSFDVVQLYR*
Ga0126369_132575931	3300012971	Tropical Forest Soil	AFGKFFLTLPLGRSQTDLYVEMVGLVRPGDGVSFDVVQLYR*
Ga0120127_101635911	3300013503	Permafrost	LFLALPLQRSQTDLYVETVGLVRPGDSVNYDMVQLYR*
Ga0132258_124759981	3300015371	Arabidopsis Rhizosphere	KFFLTLPLARSQTDLYVELVGLVRPGDGVSYDVVQLYR*
Ga0182041_112493962	3300016294	Soil	LTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0182035_101696394	3300016341	Soil	VQFKVPVAAFAKLFLTLPLGSQTDLYVEMVGLVHPGDGVSFDVVQLYR
Ga0182034_105863813	3300016371	Soil	FFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0182040_103284041	3300016387	Soil	GEVQFKVPVAAFAKLFLTLPLGSQTDLYVEMVGLVHPGDGVSFDVVQLYR
Ga0182040_112868171	3300016387	Soil	KLFLTLPLERSQTDLYVEMVGLVRPGDGVSYDVVQLYR
Ga0182038_112759482	3300016445	Soil	LTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0210407_111353662	3300020579	Soil	PVAAFGKFFLTLPLQPPQTDLYVELVGLVQPGDGVSFDVVQLYR
Ga0126371_116432681	3300021560	Tropical Forest Soil	PVAAFGKLFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0126371_124558261	3300021560	Tropical Forest Soil	QVAAFGKFFLTLPLGRSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0126371_127409132	3300021560	Tropical Forest Soil	FAKFFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVIQLYR
Ga0126371_130074182	3300021560	Tropical Forest Soil	PVAAFAKLFLTLPLERSQTDLYVEMVGLVRPGDGVSYDVVQLYR
Ga0126371_136824771	3300021560	Tropical Forest Soil	AAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSYDVVQLYR
Ga0207665_105272361	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	NIPVAAFGKLFLTLPLSRSQTDLYVELVDLVKPGDHVNLDLVQLYR
Ga0207641_106185743	3300026088	Switchgrass Rhizosphere	RTVRYSCPAFGKFFLTLPLARSQTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0209055_11551631	3300026309	Soil	KLFLTLPLAQSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0318534_107881011	3300031544	Soil	PVAAFGKLFLALPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0318538_104336122	3300031546	Soil	GKLFLTLPLERSQTDLYVEMVGLVRPGDGVSYDVVQLYR
Ga0318573_102833541	3300031564	Soil	LEGEVQFNVPVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318496_106315681	3300031713	Soil	VQFKVPVAAFAKFFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318493_101706241	3300031723	Soil	QFNVPVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318500_105985201	3300031724	Soil	LEGEEFKVPVAAFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0318501_107744732	3300031736	Soil	LTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0306918_107746601	3300031744	Soil	EGEVQFKVPVAAFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0318537_103245192	3300031763	Soil	VPVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318535_104502431	3300031764	Soil	LFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0318526_101275091	3300031769	Soil	EQQYNVPVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318546_102393015	3300031771	Soil	VPVVAFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0318548_102931013	3300031793	Soil	AFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318503_102409802	3300031794	Soil	GEVQSTVAVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318550_103199602	3300031797	Soil	DYVVQFNVPVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318567_102905383	3300031821	Soil	QLEGEVQFKVPVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318567_107740942	3300031821	Soil	NVPVAAFGKLFLTLPLGRSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0310917_106625452	3300031833	Soil	AKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0310917_106941042	3300031833	Soil	EVQFNVPVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0306919_102772013	3300031879	Soil	QSSVPVAAFGKLFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0306919_108430742	3300031879	Soil	FLTLPLERSQTDLYVEMVGLVRPGDGVSYDVVQLYR
Ga0306919_114249962	3300031879	Soil	AFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0318536_106221742	3300031893	Soil	STVPVAAFGKLFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0318520_101822583	3300031897	Soil	KVPVAAFAKLFLTLPLGSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318520_102186931	3300031897	Soil	FNVPVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318520_106400421	3300031897	Soil	VPVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0306923_109981603	3300031910	Soil	FKVPVAAFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0310916_106957003	3300031942	Soil	FLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0310909_116217012	3300031947	Soil	VPSMDDTQASVPVAAFGKFFLTLPLQQSQTDLYVELVGLVQPGDGVSFDVVQLYR
Ga0318507_103125422	3300032025	Soil	QLEGEVQFNVPVAAFGKLFLTLPLERSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318549_102778613	3300032041	Soil	PVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318558_105366721	3300032044	Soil	QLESEAQFNVPVAAFGKLFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0318570_101438043	3300032054	Soil	QLEGEEFKVPVAAFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0318575_105806941	3300032055	Soil	GKLFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0318514_106223402	3300032066	Soil	LVGEVQSTVAVAAFGKLFLTLPLARSQTDLYVEMVGLVRPGDGVSFDVVQLYR
Ga0318553_101377184	3300032068	Soil	QSEGEVQFKVPVAAFAKLFLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR
Ga0307470_118601762	3300032174	Hardwood Forest Soil	FGKLFLTLPLQRSQTDLYVELVGLVRPSDDGNFEMVQLYR
Ga0306920_1004241154	3300032261	Soil	VAAFGKFFLTLPLARSQTDLYVELVGLVRPGDGVSFDVVQLYR
Ga0310914_104315931	3300033289	Soil	FLTLPLGSKTDLYVELVGLVRPGDGVSYDVVQLYR

Hidden Markov Model


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