Metagenome / Metatranscriptome Family F097304

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097304
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	149 residues
Representative Sequence	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSSS
Number of Associated Samples	97
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.57 %
% of genes near scaffold ends (potentially truncated)	35.58 %
% of genes from short scaffolds (< 2000 bps)	77.88 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.846 % of family members)
Environment Ontology (ENVO)	Unclassified (43.269 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.88% β-sheet: 0.00% Coil/Unstructured: 33.12%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02784	Orn_Arg_deC_N	20.19
PF09594	GT87	6.73
PF01967	MoaC	1.92
PF00753	Lactamase_B	1.92
PF02803	Thiolase_C	0.96
PF03454	MoeA_C	0.96
PF12270	Cyt_c_ox_IV	0.96
PF01997	Translin	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	20.19
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	20.19
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	1.92
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.96
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	0.96
COG2178	Predicted RNA- or ssDNA-binding protein, translin family	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.23 %
Unclassified	root	N/A	5.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.23 %
Unclassified	root	N/A	5.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.23 %
Unclassified	root	N/A	5.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.65 %
Unclassified	root	N/A	5.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.65 %
Unclassified	root	N/A	5.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	82.69 %
Unclassified	root	N/A	5.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	81.73 %
Unclassified	root	N/A	5.77 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.73 %
Unclassified	root	N/A	5.77 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.73 %
Unclassified	root	N/A	5.77 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.73 %
Unclassified	root	N/A	5.77 %
Nocardiopsis chromatogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis chromatogenes	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_82554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300000956\|JGI10216J12902_100184959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300004156\|Ga0062589_101360146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300004157\|Ga0062590_102399850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300004463\|Ga0063356_101001311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1193	Open in IMG/M
3300004480\|Ga0062592_100166026	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300005093\|Ga0062594_102238600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005166\|Ga0066674_10379736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300005172\|Ga0066683_10029435	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300005178\|Ga0066688_10095564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1808	Open in IMG/M
3300005181\|Ga0066678_10300227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1051	Open in IMG/M
3300005187\|Ga0066675_11060836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300005366\|Ga0070659_101420061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300005444\|Ga0070694_101900203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300005447\|Ga0066689_10723760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300005451\|Ga0066681_10219299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis chromatogenes	1144	Open in IMG/M
3300005526\|Ga0073909_10012410	All Organisms → cellular organisms → Bacteria	2625	Open in IMG/M
3300005540\|Ga0066697_10028638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3074	Open in IMG/M
3300005545\|Ga0070695_101115367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300005552\|Ga0066701_10186161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1268	Open in IMG/M
3300005556\|Ga0066707_10059423	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300005557\|Ga0066704_10457726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300005559\|Ga0066700_10708391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300005560\|Ga0066670_10832270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300005569\|Ga0066705_10058742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2184	Open in IMG/M
3300005576\|Ga0066708_10656606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300005598\|Ga0066706_10053169	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300006031\|Ga0066651_10058435	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300006573\|Ga0074055_11571879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300006794\|Ga0066658_10404732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300006797\|Ga0066659_10342936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1156	Open in IMG/M
3300006800\|Ga0066660_10739050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300009012\|Ga0066710_101366801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300009012\|Ga0066710_103749800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300009090\|Ga0099827_10341331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1273	Open in IMG/M
3300009137\|Ga0066709_100971727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1242	Open in IMG/M
3300009137\|Ga0066709_102563979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300009147\|Ga0114129_11813774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300010147\|Ga0126319_1282927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300010301\|Ga0134070_10140071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300010320\|Ga0134109_10495260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300010321\|Ga0134067_10425790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300010329\|Ga0134111_10179947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300010337\|Ga0134062_10473412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300010397\|Ga0134124_10090748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2643	Open in IMG/M
3300012019\|Ga0120139_1070931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300012198\|Ga0137364_10508126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300012199\|Ga0137383_10120091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1917	Open in IMG/M
3300012200\|Ga0137382_10096980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1939	Open in IMG/M
3300012200\|Ga0137382_10694545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300012206\|Ga0137380_10275986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1510	Open in IMG/M
3300012208\|Ga0137376_10105303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2393	Open in IMG/M
3300012210\|Ga0137378_10967640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300012285\|Ga0137370_10042073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2422	Open in IMG/M
3300012349\|Ga0137387_10444470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	941	Open in IMG/M
3300012351\|Ga0137386_10082604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2253	Open in IMG/M
3300012356\|Ga0137371_10060129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2942	Open in IMG/M
3300012362\|Ga0137361_11362043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300012955\|Ga0164298_10082648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1651	Open in IMG/M
3300012957\|Ga0164303_10138406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1270	Open in IMG/M
3300012958\|Ga0164299_10835525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300012958\|Ga0164299_10878020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300012976\|Ga0134076_10241113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300012984\|Ga0164309_10311388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1140	Open in IMG/M
3300012986\|Ga0164304_10175980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1374	Open in IMG/M
3300012986\|Ga0164304_11017603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300014157\|Ga0134078_10128058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	978	Open in IMG/M
3300018027\|Ga0184605_10425518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300018061\|Ga0184619_10441790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300018071\|Ga0184618_10103701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1118	Open in IMG/M
3300018431\|Ga0066655_10005413	All Organisms → cellular organisms → Bacteria	5187	Open in IMG/M
3300018433\|Ga0066667_10671059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300020004\|Ga0193755_1031921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1742	Open in IMG/M
3300021415\|Ga0193694_1000283	All Organisms → cellular organisms → Bacteria	6521	Open in IMG/M
3300021418\|Ga0193695_1005175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2455	Open in IMG/M
3300022694\|Ga0222623_10271358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300025885\|Ga0207653_10000004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	263142	Open in IMG/M
3300025981\|Ga0207640_11294890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300026116\|Ga0207674_11965571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300026301\|Ga0209238_1076328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300026322\|Ga0209687_1268811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300026324\|Ga0209470_1051341	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300026325\|Ga0209152_10138382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300026536\|Ga0209058_1152047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300026537\|Ga0209157_1089688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1487	Open in IMG/M
3300026538\|Ga0209056_10032661	All Organisms → cellular organisms → Bacteria	4886	Open in IMG/M
3300026538\|Ga0209056_10169746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1639	Open in IMG/M
3300027882\|Ga0209590_10499382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300028708\|Ga0307295_10019052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1671	Open in IMG/M
3300028710\|Ga0307322_10051302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300028711\|Ga0307293_10196221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300028716\|Ga0307311_10078045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300028718\|Ga0307307_10012251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2292	Open in IMG/M
3300028782\|Ga0307306_10075572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300028828\|Ga0307312_10086796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1922	Open in IMG/M
3300028881\|Ga0307277_10453995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300031152\|Ga0307501_10190745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300031421\|Ga0308194_10398462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Host-Associated	Host-Associated	4.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.38%
Aquatic	Environmental → Aquatic	4.81%
Plants	Host-Associated → Plants	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.38%
Sediment	Environmental → Aquatic → Sediment	3.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Freshwater	Environmental → Aquatic → Freshwater	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_01192370	2199352025	Soil	VNRRSLHRSLTQGTIEPFPTLWRQPTKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVMGVAASMLAVKYAADEDASTAPTGDGHRSDA
INPhiseqgaiiFebDRAFT_1053475122	3300000364	Soil	MGRRLNYAGIGGAVAGVISLLGIYSYWWTTDTTSYDGVADVSGRLALGMSVGLFAFGLAYVLMSDPTIRRVMGALMTICAVVLTLACVWGVLRSDDVAPXATIELGLWVSAIGGVLGIVASLLALRDAMAFDAGSPGAPGEA*
JGI10216J12902_1001849591	3300000956	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVMGVAASMLAMKYAADEDASTAPTG
Ga0062589_1013601462	3300004156	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDVVSQEAPSTS*
Ga0062590_1023998501	3300004157	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDVVSQEAPSTS
Ga0063356_1010013112	3300004463	Arabidopsis Thaliana Rhizosphere	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDVKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGVSTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTASTGDGRGSDAVSQEAPSTG*
Ga0062592_1001660262	3300004480	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDVVSQEAPSTR*
Ga0062594_1022386001	3300005093	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRIRRAMGALMTLCAAVLTLACVWGLQRADSVAPGASTQAGLWVSLLGGVMGIVASMLAVKYAADEDASVGSGDEWGSDAVSHSASAS*
Ga0066674_103797361	3300005166	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG*
Ga0066683_100294354	3300005172	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG*
Ga0066688_100955642	3300005178	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSGDERGSDAVSPSPSVS*
Ga0066678_103002272	3300005181	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDHRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSGDERGSDAVSTSPSVS*
Ga0066675_110608361	3300005187	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDA
Ga0066388_1006471571	3300005332	Tropical Forest Soil	MGRTLNYAGIGGAVAGVISLLGIYSYWWSTETTSFDGVADISGRLALGMSVGLFAFGVAYVVMSDRSIRRAMGALMTICAVVLTLACVWGVIRADDVAPGATIELGLWVSAIGAVLGIVASLLALRDAMAADARSSSSAAVS*
Ga0070659_1014200611	3300005366	Corn Rhizosphere	VKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFSFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGFWVSLLGGVMGVAASMLAVKYAADEDASTAPTHDGHGSDAVSQG
Ga0070694_1019002031	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RVEAPVKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFSFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGFWVSLLGGVMGVAASMLAVKYAADEDASTAPTHDGHGSDAVSQGAPSTG*
Ga0066689_107237602	3300005447	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDEDA
Ga0066681_102192992	3300005451	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERETDAVSHTSSTG*
Ga0073909_100124104	3300005526	Surface Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGIWVSLLGGVIGIAASMLAVKYAADEDASTAPTGDGQGSDAVSQGAPSTG*
Ga0066697_100286384	3300005540	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETETTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG*
Ga0070695_1011153671	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFSFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVMGVAASMLAVKYAADEDASTAPTHDGHGSDAVSQGAPSTG*
Ga0066701_101861612	3300005552	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNIAPGASTQVGLWVSLLGGVMGIAASMLALKYASDEDASADAGDERMSDAVSHTTSTS*
Ga0066707_100594232	3300005556	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASAQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSDDERGSDAVSTSPSVS*
Ga0066704_104577261	3300005557	Soil	GLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGMMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSTS*
Ga0066700_107083911	3300005559	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSGDERGSDAVSPSPSVS*
Ga0066670_108322701	3300005560	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETETTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAV
Ga0066705_100587422	3300005569	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASAQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSGDERGSDAVSPSPSVS*
Ga0066708_106566061	3300005576	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLPVACVWGLQRADNVALGASAQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSDDERGSDAVSTSPSVS*
Ga0066706_100531692	3300005598	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSDDERGSDAVSTSPSVS*
Ga0066651_100584353	3300006031	Soil	AVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG*
Ga0066656_108190591	3300006034	Soil	MGRKLNYAGIGGAVAGVISLLGIYSYWWSTDTTSYDGVADISGRLALGMSVGLFAFGVAFVVMSDPAIRRAMGALMTVCAVVLTLACVWGVLRADQVASGATIELGLWVSGIGGVLGIVASILALRDAMATDAGSSSRTGGP*
Ga0074055_115718792	3300006573	Soil	MKDQRFNYGGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNIAPGASTEAGLWVSLLGGFMGVAASMLAVKYAADEDASTVPTGDGHGSDAVSQEAPSTS*
Ga0066658_104047322	3300006794	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGMMGIAASMLAVKYASDEDASADSGDERMSD
Ga0066659_103429361	3300006797	Soil	GIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNIAPGASTQVGLWVSLLGGVMGIAASMLALKYASDEDASADAGDERMSDAVSHTTSTS*
Ga0066660_107390501	3300006800	Soil	MKDQRLNYDGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASADSGDEQMSDAVPHTTSTS*
Ga0066710_1013668012	3300009012	Grasslands Soil	MKDQRFNYAGIGGAVAGVVGLLGIYADWWQTDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRIRRAMGALMTLFAVVLTLACVWGLQRADSVAAGASTKAGLWVSLLGGVVGIAASMLALKYASDEDASTMTSGGDHGADTVSHASSAS
Ga0066710_1037498001	3300009012	Grasslands Soil	PKKDPRFNQAAFGGAVGGVVGLDGIYAGWSETETTVYHGTAAISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG
Ga0099827_103413313	3300009090	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRIRRAMGALMTLFAAVLTLACVWGLQRADSVAPGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDAFADPGDDRMSDAVSHTTSTS*
Ga0066709_1009717272	3300009137	Grasslands Soil	MKDQRFNYAGIGGAVAGVVGLLGIYADWWQTDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRIRRAMGALMTLFAVVLTLACVWGLQRADSVAAGASTKAGLWVSLLGGVVGIAASMLALKYASDEDASTMTSGGDHGADTVSHASSAS*
Ga0066709_1025639791	3300009137	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGASYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSSS*
Ga0114129_118137742	3300009147	Populus Rhizosphere	ADWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLSAAVLTLSCVWGVMRADNVAPGASTETGLWVSLLGGVIGIAASMLAVKYAADEDASPAPTDDGHDSDAVSKVPSTG*
Ga0126319_12829271	3300010147	Soil	AIMKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVLSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVASGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTTPTGDGHGSDAVSQEVPSTG*
Ga0134070_101400711	3300010301	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMVIAASMLAVK
Ga0134109_104952601	3300010320	Grasslands Soil	WWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG*
Ga0134067_104257901	3300010321	Grasslands Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSGDERGSDAVSTSPS
Ga0134111_101799473	3300010329	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSCDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSSS*
Ga0134062_104734122	3300010337	Grasslands Soil	VAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG*
Ga0134124_100907482	3300010397	Terrestrial Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETAAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRGMGALMTLCAAVLTLSCVWGLLRADNIAPGASTEAGIWVSLLGGVIGVAASMLAVKYAADEDASTVPTGDGQGSDAVSQGAPSTG*
Ga0120139_10709311	3300012019	Permafrost	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDAKVYYGTADISGQLALATAIGLFAFGVAYVVFSDQRIRRAMGALMTLFAVVLTLACVWGLLRADNVAPGASTQVGLWVSLLGGVMGVAASMLAVK
Ga0137364_105081262	3300012198	Vadose Zone Soil	MKDQRFNYAGIGGTVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADDVAPGASTEAGLWLSLLGGVMGVAASMLAVKYAADEDASTTPTGDGHGSDAV
Ga0137383_101200912	3300012199	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGVQRADNVAAGASTKAGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSTS*
Ga0137382_100969802	3300012200	Vadose Zone Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADDVAPGASTEAGLWLSLLGGVMGVAASMLAVKYAADEDASTTPTGDGHGSDAVSQEAPSTG*
Ga0137382_106945451	3300012200	Vadose Zone Soil	MKDQRFNYAGIGGAVAGVVGLLGIYADWWQTDTTVFHGTADISGQLALAMSIGLFVFGAAYVLFSDKRIRRAMGALMTLFAVVLTLACVWGLQRADNVAAGASTKAGLWVSLLGGVMGIAASMLAVKYASDEDASSDSGDERMSDAVS
Ga0137380_102759861	3300012206	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRVRRAMGALMTLFAVVLTLACVWGVQRADNVAAGASTKAGLWVSLLEGVMGIAASMLAVKYASDEDASA
Ga0137376_101053032	3300012208	Vadose Zone Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADDVAPGASTEAGLWLSLLGGVIGVAASMLAVKYAADEDASTTLTGDGHGSDAVSQEAPSTG*
Ga0137378_109676402	3300012210	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGVQRADNVAPGASTQVGLWVSLLGGVMGIAASMLALKYASDEDAFADAGDERMSDAVSHTTSTS*
Ga0137370_100420731	3300012285	Vadose Zone Soil	MKDQRFNYAGIGGAVAGVVGLLGIYADWWQTDTTVFHGTADISGQLALAMSIGLFVFGAAYVLFSDKRIRRAMGALMTLFAVVLTLACVWGLQRADNVAAGASTKAGLWVSLLGGVMGIAASMLALKYASDEDASAMSSS
Ga0137387_104444701	3300012349	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDQDASADSGDERMSDAVSHTTSTS*
Ga0137386_100826044	3300012351	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRVRRAMGALMTLFAVVLTLACVWGVQRADNVAAGASTKAGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTSSTG*
Ga0137371_100601293	3300012356	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSTS*
Ga0137361_113620431	3300012362	Vadose Zone Soil	PDPVEAPMKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVVFADQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASADSDDERMSDAVSHTSSTG*
Ga0164298_100826482	3300012955	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGIWVSLLGGVIGIAASRLAVKYAADEDASTAPTGDGQGSDAVSQGAPSTG*
Ga0164303_101384062	3300012957	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADDVAPGASTEAGLWVSLLGGVMGVAASMLAVKYAADEEAPTAPTGDGHASDAVSEGAPLTG*
Ga0164299_108355252	3300012958	Soil	GLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNIAPGASTEAGLWVSLLGGVMGVAASMLAVKYAADEDASTAPTADGRVSDAVSQEAPSTG*
Ga0164299_108780201	3300012958	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGIWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGQGSDAVSQGAPSTG*
Ga0134076_102411131	3300012976	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASTAPTGDGHGSDAVSQEAPSTA*
Ga0164309_103113882	3300012984	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNIAPGASTEAGLWVSLLGGVMGVAASMVAVKYAADEDASTAPTADGRGSDAVSQEAPSTG*
Ga0164304_101759802	3300012986	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNIAPGASTEAGLWVSLLGGVMGVAASMVAVKNAADEDASTAPTADGRGSDAVSQEAPSTG*
Ga0164304_110176031	3300012986	Soil	MTDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGIWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGQGSDAVSQGAPSTG*
Ga0134078_101280582	3300014157	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSGDERGSDAVSTSPSVS*
Ga0134078_106721651	3300014157	Grasslands Soil	SILGVYSYWWSTPTTLYDGVADVSGRLALGMSVGLFAFGIAYVVLSDPAIRRAMGALMTVCAVVLTLACVWGVLRSDHVAAGSSVELGLWVSAIGGVLGIVASVLALRDAMAADAGSPSATSGG*
Ga0134085_102573612	3300015359	Grasslands Soil	MGRKLNYAGIGGAVAGVVSLLGIYSYWWSTDTVSYDGIADISGRLALGMSIGLFAFGVAYVLISDRAIRRAMGALMTICAVILTLACVWAVFRSDDVSSGATVELGLWVSAIGGVLGIVASALALRDAMGSDAQPSPAAATL*
Ga0184605_104255182	3300018027	Groundwater Sediment	MKDQRLNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYGTGDISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVK
Ga0184619_104417901	3300018061	Groundwater Sediment	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDVKSYYGTADVSGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTTPTGDGHGSDAVSQEVPSTG
Ga0184618_101037012	3300018071	Groundwater Sediment	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDVKSYYGTADVSGQLSLAMSVGLFAFGVSYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVALGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTTPTGDGNGSDAVSQEVPSTG
Ga0066655_100054135	3300018431	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG
Ga0066667_106710591	3300018433	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSSS
Ga0190268_112824661	3300018466	Soil	MDRNQITYAGVGGAVAGVIGFIGVYANWWASADTGFDGTADASGTLGLAMSIATFAFGGGYILFSDLRIRRAMGALMTLSAVVLTLAAVWGTMRADEVAAGASTETGLWVSGLGGILGIAAGLLALRDSQAVDAAGGPDRDSIAS
Ga0193755_10319212	3300020004	Soil	MKDQRINYAGIGGAVAGVVGLLGIYAGWWDTDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNIAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDAVSQEAPSTG
Ga0193694_10002834	3300021415	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYASWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVALGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDPVSQEAPSTG
Ga0193695_10051755	3300021418	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDAKVYYGTADISGQLALATSIGLFAFGVAYVVFSDQRIRRAMGALMTLFAVVLTLACVWGLLRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASADSGDEPMSDAVSHTTSTG
Ga0222623_102713581	3300022694	Groundwater Sediment	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYATADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGRGSDA
Ga0207653_1000000476	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRIRRAMGALMTLCAAVLTLACVWGLQRADSVAPGASTQAGLWVSLLGGVMGIVASMLAVKYAADEDASVGSGDEWGSDAVSHSASAS
Ga0207640_112948901	3300025981	Corn Rhizosphere	TDAKSYYGTADISGQLALAMSIGLFSFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGFWVSLLGGVMGVAASMLAVKYAADEDASTAPTHDGHGSDAVSQGAPSTG
Ga0207674_119655711	3300026116	Corn Rhizosphere	GLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRIRRAMGALMTLCAAVLTLACVWGLQRADSVAPGASTQAGLWVSLLGGVMGIVASMLAVKYAADEDASVGSGDEWGSDAVSHSASAS
Ga0209238_10763283	3300026301	Grasslands Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGASYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGMMGIAASMLAVKYA
Ga0209687_12688111	3300026322	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGS
Ga0209470_10513414	3300026324	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTLYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG
Ga0209152_101383822	3300026325	Soil	MKDQRLNYAGIGGAVAGIVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVALGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDASAGSGDERGSDAVSPSPSVS
Ga0209058_11520471	3300026536	Soil	SVEAPMKDQRLNYAGIGGAVAGVVGLLGIYADWWETETTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG
Ga0209157_10896882	3300026537	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETETTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASAGSVDERESDAVSHTSSTG
Ga0209056_100326617	3300026538	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETETTVYHGTADISGQLALAMSIGLFAFGAAYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRTDNVAAGASTQAGLWVSLLGGVMGIAASMLAVKYAADEDASADSGDERMSDAVSHTTSSS
Ga0209056_101697462	3300026538	Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGASYVLSSDQRIRRAMGALMTLFAVVLTLACVWGLQRADNVAPGASTQVGLWVSLLGGVMGIAASMLAVKYASDEDASADSGDERMSDAVSHTTSSS
Ga0209590_104993821	3300027882	Vadose Zone Soil	MKDQRLNYAGIGGAVAGVVGLLGIYADWWETDTTVYHGTADISGQLALAMSIGLFAFGAAYVLFSDQRIRRAMGALMTLFAAVLTLACVWGLQRADSVAPGASTQVGLWVSLLGGVMGIAASMLAVKYAADEDAFADPGDDRMSDAVSHTTSTS
Ga0307295_100190522	3300028708	Soil	MKDQRLNYAGVGGAVAGVVGLLGIYAGWWETDAKSYYATADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGRGSDAVSQEAPSTG
Ga0307322_100513021	3300028710	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYAGWWETDAKSYYATADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGRGSDAVSQEAPSTG
Ga0307293_101962211	3300028711	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYASWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDPVSQEAPSTG
Ga0307311_100780451	3300028716	Soil	MKDQRLNYAGVGGAVAGVVGLLGIYAGWWETDAKSYYATADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDAVSQEAPSTG
Ga0307307_100122513	3300028718	Soil	MKDQRFNYAGIGGAVAGVVGLLGIYASWWETDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTRDGHGSDPVSQEAPSTG
Ga0307306_100755721	3300028782	Soil	MKDQRLNYAGVGGAVAGVVGLLGIYAGWWETDAKSYYATADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDA
Ga0307312_100867962	3300028828	Soil	MKDQRINYAGIGGAVAGVVGLLGIYADWWKTDTTVYHGTADISGQLALAMSIGLFVFGAAYVLFSDERIRRAMGALMTLFAVVLTLACVWGLQRADNVAVGASTKAGLWVSLLGGVMGIAASMLALKYAADEDAATAGSGDDHGSDAVSHAPNAS
Ga0307277_104539952	3300028881	Soil	TDAKSYYGTADISGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVAPGASTEAGLWVSLLGGVIGVAASMLAVKYAADEDASTAPTGDGHGSDPVSQEAPSTG
Ga0307501_101907451	3300031152	Soil	VAGVVGLLGIYAGWWETDVKSYYGTADVSGQLALAMSIGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADDVAPGASTEAGLWLSLLGGVMGVAASMLAVKYAADEDASTMPTGDGHGSDAVSQEAPSTG
Ga0308194_103984621	3300031421	Soil	DQRFNYAGIGGAVAGVVGLLGIYAGWWETDVKSYYGTADVSGQLALAMSVGLFAFGVAYVVFSDQRIRRAMGALMTLCAAVLTLSCVWGLLRADNVALGASTEAGLWVSLLGGVIGVAASMLAVKYASDEDASADSGDERMSDAVSHTSSTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097304

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences