Metagenome / Metatranscriptome Family F097459

Basic Information
Family ID	F097459
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	76 residues
Representative Sequence	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Number of Associated Samples	102
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.08 %
% of genes near scaffold ends (potentially truncated)	39.42 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (57.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (25.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.423 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.05% β-sheet: 0.00% Coil/Unstructured: 67.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00216	Bac_DNA_binding	2.88
PF01370	Epimerase	1.92
PF00072	Response_reg	0.96
PF08379	Bact_transglu_N	0.96
PF00313	CSD	0.96
PF04392	ABC_sub_bind	0.96
PF00982	Glyco_transf_20	0.96
PF02371	Transposase_20	0.96
PF00534	Glycos_transf_1	0.96
PF08281	Sigma70_r4_2	0.96
PF01527	HTH_Tnp_1	0.96
PF05362	Lon_C	0.96
PF01694	Rhomboid	0.96
PF01936	NYN	0.96
PF13579	Glyco_trans_4_4	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	2.88
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.96
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.96
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
All Organisms	root	All Organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
cellular organisms	root	All Organisms → cellular organisms	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.35 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.69 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.92 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.73 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.96 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.96 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.96 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.96 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.96 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.96 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.69 %
Symbiodinium necroappetens	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	0.96 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.96 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.96 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.96 %
Mesorhizobium plurifarium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01BTS60	Not Available	551	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1004704	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300000650\|AP72_2010_repI_A1DRAFT_1005136	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300000787\|JGI11643J11755_11752532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1526	Open in IMG/M
3300000789\|JGI1027J11758_12757571	Not Available	630	Open in IMG/M
3300001224\|SwM_115012	Not Available	519	Open in IMG/M
3300001228\|SwM_142869	Not Available	519	Open in IMG/M
3300002906\|JGI25614J43888_10032356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1645	Open in IMG/M
3300002914\|JGI25617J43924_10026764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2030	Open in IMG/M
3300003505\|JGIcombinedJ51221_10179536	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300004139\|Ga0058897_10009742	Not Available	892	Open in IMG/M
3300004463\|Ga0063356_101610999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300004635\|Ga0062388_100587930	Not Available	1017	Open in IMG/M
3300005162\|Ga0066814_10062223	Not Available	638	Open in IMG/M
3300005163\|Ga0066823_10082260	Not Available	635	Open in IMG/M
3300005165\|Ga0066869_10111579	Not Available	558	Open in IMG/M
3300005166\|Ga0066674_10504185	Not Available	544	Open in IMG/M
3300005171\|Ga0066677_10189479	Not Available	1146	Open in IMG/M
3300005172\|Ga0066683_10393221	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005178\|Ga0066688_10196245	Not Available	1280	Open in IMG/M
3300005179\|Ga0066684_11059598	Not Available	520	Open in IMG/M
3300005184\|Ga0066671_10916429	Not Available	555	Open in IMG/M
3300005186\|Ga0066676_11123996	Not Available	517	Open in IMG/M
3300005332\|Ga0066388_102399703	Not Available	956	Open in IMG/M
3300005332\|Ga0066388_106123734	Not Available	607	Open in IMG/M
3300005468\|Ga0070707_100011505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8250	Open in IMG/M
3300005518\|Ga0070699_100128800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2230	Open in IMG/M
3300005540\|Ga0066697_10666318	Not Available	572	Open in IMG/M
3300005545\|Ga0070695_101086777	Not Available	654	Open in IMG/M
3300005555\|Ga0066692_10758512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300005557\|Ga0066704_10382442	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300005558\|Ga0066698_10798544	Not Available	612	Open in IMG/M
3300005560\|Ga0066670_10285634	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300005564\|Ga0070664_101555699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	626	Open in IMG/M
3300005566\|Ga0066693_10176919	Not Available	814	Open in IMG/M
3300005568\|Ga0066703_10456721	Not Available	765	Open in IMG/M
3300005576\|Ga0066708_10136000	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300005586\|Ga0066691_10712523	Not Available	593	Open in IMG/M
3300005713\|Ga0066905_100302048	Not Available	1257	Open in IMG/M
3300006028\|Ga0070717_10264512	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300006046\|Ga0066652_100409647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium plurifarium	1237	Open in IMG/M
3300006354\|Ga0075021_11191986	Not Available	500	Open in IMG/M
3300006797\|Ga0066659_10400765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300006893\|Ga0073928_10171315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1729	Open in IMG/M
3300007255\|Ga0099791_10186898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300007788\|Ga0099795_10251689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300009012\|Ga0066710_102584068	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300009090\|Ga0099827_10161932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1838	Open in IMG/M
3300009789\|Ga0126307_11116099	Not Available	638	Open in IMG/M
3300010037\|Ga0126304_10484956	Not Available	829	Open in IMG/M
3300010322\|Ga0134084_10412812	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300010379\|Ga0136449_100222559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3548	Open in IMG/M
3300010379\|Ga0136449_101023510	Not Available	1326	Open in IMG/M
3300010398\|Ga0126383_13072445	Not Available	545	Open in IMG/M
3300011120\|Ga0150983_14698337	Not Available	733	Open in IMG/M
3300012204\|Ga0137374_10197966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1734	Open in IMG/M
3300012210\|Ga0137378_10307307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1475	Open in IMG/M
3300012285\|Ga0137370_10792679	Not Available	588	Open in IMG/M
3300012353\|Ga0137367_11076300	Not Available	544	Open in IMG/M
3300012359\|Ga0137385_10114212	All Organisms → cellular organisms → Bacteria → Proteobacteria	2387	Open in IMG/M
3300012925\|Ga0137419_11469881	Not Available	577	Open in IMG/M
3300012957\|Ga0164303_10108530	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300015242\|Ga0137412_10278751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1316	Open in IMG/M
3300016270\|Ga0182036_11305469	Not Available	605	Open in IMG/M
3300017792\|Ga0163161_11284394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300018433\|Ga0066667_11608002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300018482\|Ga0066669_10291617	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300019890\|Ga0193728_1307380	Not Available	597	Open in IMG/M
3300020140\|Ga0179590_1089725	Not Available	823	Open in IMG/M
3300020579\|Ga0210407_11176014	Not Available	578	Open in IMG/M
3300020581\|Ga0210399_10961763	Not Available	690	Open in IMG/M
3300021086\|Ga0179596_10283517	Not Available	824	Open in IMG/M
3300021178\|Ga0210408_10828314	Not Available	723	Open in IMG/M
3300021478\|Ga0210402_10411556	Not Available	1256	Open in IMG/M
3300021560\|Ga0126371_12358845	Not Available	643	Open in IMG/M
3300026277\|Ga0209350_1133305	Not Available	558	Open in IMG/M
3300026326\|Ga0209801_1170342	Not Available	903	Open in IMG/M
3300026490\|Ga0257153_1107963	Not Available	550	Open in IMG/M
3300027070\|Ga0208365_1035125	Not Available	664	Open in IMG/M
3300027161\|Ga0208368_110940	Not Available	521	Open in IMG/M
3300027635\|Ga0209625_1145815	Not Available	529	Open in IMG/M
3300027654\|Ga0209799_1079564	Not Available	739	Open in IMG/M
3300027655\|Ga0209388_1192573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300027829\|Ga0209773_10483381	Not Available	510	Open in IMG/M
3300027846\|Ga0209180_10061114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	2095	Open in IMG/M
3300027873\|Ga0209814_10299565	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300028807\|Ga0307305_10298189	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium necroappetens	734	Open in IMG/M
3300028878\|Ga0307278_10198498	Not Available	895	Open in IMG/M
3300028881\|Ga0307277_10017872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2760	Open in IMG/M
3300028885\|Ga0307304_10564595	Not Available	525	Open in IMG/M
3300028906\|Ga0308309_11916094	Not Available	500	Open in IMG/M
3300031572\|Ga0318515_10546352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300031713\|Ga0318496_10707289	Not Available	556	Open in IMG/M
3300031724\|Ga0318500_10046206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1828	Open in IMG/M
3300031769\|Ga0318526_10191912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	834	Open in IMG/M
3300031770\|Ga0318521_10503861	Not Available	727	Open in IMG/M
3300031879\|Ga0306919_10212338	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300031893\|Ga0318536_10697651	Not Available	506	Open in IMG/M
3300031912\|Ga0306921_10819777	Not Available	1061	Open in IMG/M
3300031959\|Ga0318530_10150717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	944	Open in IMG/M
3300032042\|Ga0318545_10293366	Not Available	584	Open in IMG/M
3300032043\|Ga0318556_10676009	Not Available	537	Open in IMG/M
3300032205\|Ga0307472_102573494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300032261\|Ga0306920_103292139	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	5.77%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.42%
Plants	Host-Associated → Plants	5.77%
Aquatic	Environmental → Aquatic	3.85%
Solid Waste	Engineered → Solid Waste	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%
Grass	Engineered → Solid Waste → Grass	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.04%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%
Composting	Engineered → Solid Waste → Grass → Composting	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001224	Switchgrass rhizosphere microbial communities from Knoxville, Tennessee, USA - 12_1	Host-Associated	Open in IMG/M
3300001228	Switchgrass rhizosphere microbial communities from Knoxville, Tennessee, USA - 12_joined	Host-Associated	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027161	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_02279450	2170459015	Switchgrass, Maize And Mischanthus Litter	MVMSHKGRNSDPGRTPLEPAVRHRKPTALMEAQRAALQRNSESELIKAGDKRLEPRADVALKPKFETRPLKGLRHRSR
AP72_2010_repI_A01DRAFT_10047041	3300000579	Forest Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDGP*
AP72_2010_repI_A1DRAFT_10051363	3300000650	Forest Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDXX*
JGI11643J11755_117525321	3300000787	Soil	IGSSRDNMSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
JGI1027J11758_127575712	3300000789	Soil	MSHKGXNRDXGRMPREPAVTHKKSTALMEAQLESLKRNSGSEFIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS*
SwM_1150121	3300001224	Switchgrass Rhizosphere	DNMSHKGRNRDPGRIPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLEPKADATLKTKFETRPLRGQRHRSDRS*
SwM_1428692	3300001228	Switchgrass Rhizosphere	DNMSHKGRNRDPGRIPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLEPRAGATLKTKFETRPLRGRRHRSDRS*
JGI25614J43888_100323564	3300002906	Grasslands Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKAGATLKTKFETRPLRGRRHRSDRS*
JGI25617J43924_100267643	3300002914	Grasslands Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
JGIcombinedJ51221_101795362	3300003505	Forest Soil	MSHKGRNRDPGRMSREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
Ga0058897_100097422	3300004139	Forest Soil	MSQEGRNHELGRMSREPAVTHRKPTALMEAQLKSLERNSGSELIKAGDKRLQPRADAALKPKFDTRPLKGRRHRSGPF*
Ga0063356_1016109991	3300004463	Arabidopsis Thaliana Rhizosphere	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSEFIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS*
Ga0062388_1005879301	3300004635	Bog Forest Soil	MSYKGRNSDPGRTPREPAVTHRKPTALMEAQLESLKRNAGSELIKAADKRHRPNTDASVKTKFETRPLRGRRHRSDPA*
Ga0066814_100622231	3300005162	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADAALKPKFETRPPKGRRHRSGPF*
Ga0066823_100822602	3300005163	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETR
Ga0066869_101115791	3300005165	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
Ga0066674_105041851	3300005166	Soil	MSHKGRNCDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLEPKADATLKTKFETRPLRGRRHRSDRS*
Ga0066677_101894791	3300005171	Soil	RMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRCHRSDRS*
Ga0066683_103932211	3300005172	Soil	MPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFE
Ga0066688_101962453	3300005178	Soil	RDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRCHRSDRS*
Ga0066684_110595981	3300005179	Soil	MSHKGRNCDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFE
Ga0066671_109164291	3300005184	Soil	MSHKGRNRDSGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
Ga0066676_111239961	3300005186	Soil	MSHKGRNCDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
Ga0066388_1023997032	3300005332	Tropical Forest Soil	MSHKGRNRDPGRMPREPAVTHKKPTALMEAQLESLKRNSGSELIKVGDKRLQPKADATLKTKSETRPLRGRRHRSDRS*
Ga0066388_1061237342	3300005332	Tropical Forest Soil	MSHKGRNRDPGRMPREPAVTHKKSAALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFE
Ga0070707_10001150512	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRH
Ga0070699_1001288004	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLEPKADATLKTKFETRPLRGRRHRSDRS*
Ga0066697_106663181	3300005540	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRCHRSDRS*
Ga0070695_1010867771	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS*
Ga0066692_107585121	3300005555	Soil	GRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS*
Ga0066704_103824422	3300005557	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRHHRSDRS*
Ga0066698_107985441	3300005558	Soil	MSHKGPNRDLGRMPCEPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
Ga0066670_102856342	3300005560	Soil	REPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRCHRSDRS*
Ga0070664_1015556991	3300005564	Corn Rhizosphere	MSHKGRNSDPGRTPLEPAVTHRKPTALMEAQRAALQRNSESELIKAGDKRLEPRADAALEPKFEIGL*
Ga0066693_101769191	3300005566	Soil	MSHKGRNRDSGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRGHRSDRS*
Ga0066703_104567212	3300005568	Soil	MSHKGRNCDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS*
Ga0066708_101360001	3300005576	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFE
Ga0066691_107125231	3300005586	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLEPKADATLKTKFETRPLRGRRHRSDRS*
Ga0066905_1003020483	3300005713	Tropical Forest Soil	DNMSHKGRNRDPGRMPREPAVTHKKPTALMEAQLESLKRNSGSELIKVGDKRLQPKADATLKTKSETRPLRGRRHRSDRS*
Ga0070717_102645124	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS*
Ga0066652_1004096471	3300006046	Soil	MSHKGPNRDLGRMPCEPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLEPKADATLKTKFETRPLRGRRHRSDRS*
Ga0075021_111919861	3300006354	Watersheds	TYLGFWLGNSSSDKMSHKGRNSDPGRTPLEPAVTHRKPTALMEAQREALKRNPESELIKAGDKRLQPRADAALKPKFDTRPLKGRRHRSGPF*
Ga0066659_104007651	3300006797	Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNCGSELIKAGDKRLEPKADATLKTKFETRPLRGRRHRSDRS*
Ga0073928_101713152	3300006893	Iron-Sulfur Acid Spring	MSHKGRNSDPGRTPLEPAVTHRKPTALMEAQRKALKRNPESELIKAGDKRLQPRADAALKPKFETRPPKGRRHRSGPF*
Ga0099791_101868982	3300007255	Vadose Zone Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKAGATLKTKFETRPLRGRRHRSDRS*
Ga0099795_102516892	3300007788	Vadose Zone Soil	MSHKGPNRDLGRMPREPAVTRKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKAGATLKTKFETRPLRGRRHRSDRS*
Ga0066710_1025840681	3300009012	Grasslands Soil	MSHKGRNCDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS
Ga0099827_101619324	3300009090	Vadose Zone Soil	MPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKAGATLKTKFETRPLRGRRHRSDRS*
Ga0126307_111160992	3300009789	Serpentine Soil	MNRKGRNVDLGRAPREPSVTHRKPTALMEAQLESLKRQPGSELIKAGDKRLQTRTDALLKMKFKARRIRQG*
Ga0126304_104849562	3300010037	Serpentine Soil	MNRKGRNVDLGRAPGEPSVTHRKPTALMEAQLESLKRQPGSELIKAGDKRLQPRTDALLKMRLKTGRVRER*
Ga0134084_104128121	3300010322	Grasslands Soil	MSHKGRNCDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRCHRSDRS*
Ga0136449_1002225592	3300010379	Peatlands Soil	MSHKGRNSDPGRTPLEPAVTHRKPTALMEAQREALKRNPESELIKAGDKRLQPRADAALKPKFDTRPLKGRRHRSGPF*
Ga0136449_1010235101	3300010379	Peatlands Soil	VASLYLGFWLGNSSSDKMSHKGRNSDPGRTPLEPAVTHRKPTALMEAQREALKRNSESELIKAGDKRLQPKAAAALKPKFETRPPKGRRHRSGPF*
Ga0126383_130724451	3300010398	Tropical Forest Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRS
Ga0150983_146983373	3300011120	Forest Soil	MSHKGRNSDPGRTPLEPAVTHRKPTALMEAQREALKRNPESELIKAGDKRLQPKADAALKPKFETRPLKGRRHRSGPF*
Ga0137374_101979662	3300012204	Vadose Zone Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRRHRSDRS*
Ga0137378_103073073	3300012210	Vadose Zone Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRG
Ga0137370_107926791	3300012285	Vadose Zone Soil	MSHKSRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRPHRSDRS*
Ga0137367_110763001	3300012353	Vadose Zone Soil	MSHKGRNRDPGRMPREPAVTHKKPTALMEAQLESLKRNSGSELIKVGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
Ga0137385_101142125	3300012359	Vadose Zone Soil	GRNCDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFESRPLRGRCHRSDRS*
Ga0137419_114698811	3300012925	Vadose Zone Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKAGATLKTKFESRPLRGRRHRSDRS*
Ga0164303_101085303	3300012957	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLRRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS*
Ga0137412_102787514	3300015242	Vadose Zone Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSALGWTKPPRRRGSPGPA
Ga0182036_113054691	3300016270	Soil	MSHKGRNRDPGRMPREPAVTHKAPTALMEAQLESLKRNSGSELIKAGDKRLQPRADATLKTKFETRSLRGRRHGSDRS
Ga0163161_112843942	3300017792	Switchgrass Rhizosphere	MSHKGRNRDPGRMPREPAVTHKKPTALLEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0066667_116080022	3300018433	Grasslands Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNCGSELIKAGDKRLEPKADATLKTKFETRPLRGRRHRSDRS
Ga0066669_102916172	3300018482	Grasslands Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRHHRSDRS
Ga0193728_13073801	3300019890	Soil	MSHKGRNRDPARMSREAAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATRKTKFETRPLRGRRHRSDRS
Ga0179590_10897251	3300020140	Vadose Zone Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLLPKADATLKTKFETRPLRGRRHRSDRS
Ga0210407_111760142	3300020579	Soil	NSDPGRTSLEPAVTHRKPTALMEAQREALKRNPESELIKAGDKRLQPRADAALKPKFDTRPLKGRRHRSGPF
Ga0210399_109617631	3300020581	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLRRNSGSELIKAGDKRLQPKADATLKTRFETRP
Ga0179596_102835172	3300021086	Vadose Zone Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKAGATLKTKFETRPLRGRRHRSDRS
Ga0210408_108283142	3300021178	Soil	MSHKGRNSDPGRTPLEPAVTHRKPTALMEAQREALKRNPESELIKAGDKRLQPKADAALKPKFETRPLKGRRHRSGPF
Ga0210402_104115564	3300021478	Soil	MSHKGRNSDPGRTSLEPAVTHRKPTALMEAQREALKRNPESELIKAGDKRLQPRADAALKPKFDTRPLKGRRHRSGPF
Ga0126371_123588451	3300021560	Tropical Forest Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSD
Ga0209350_11333051	3300026277	Grasslands Soil	MSHKGPNRDLGRMPCEPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLEPKADATLKTKFETRPLRGRRHRSDRS
Ga0209801_11703422	3300026326	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSNRS
Ga0257153_11079631	3300026490	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDR
Ga0208365_10351251	3300027070	Forest Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQREALKRNPESELIKAGDKRLQPKADAALKPKFETRPLKGRRHRSGPF
Ga0208368_1109401	3300027161	Forest Soil	IGSSRDNMSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0209625_11458151	3300027635	Forest Soil	MSHKGRNRDLGRVPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDHR
Ga0209799_10795642	3300027654	Tropical Forest Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDGP
Ga0209388_11925732	3300027655	Vadose Zone Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKAGATLKTKFETRPLRGRRHRSDRS
Ga0209773_104833811	3300027829	Bog Forest Soil	RTPREPAVTHRKPTALMEAQLESLKRNAGSELIKAADKRHRPNTDASVKTKFETRPLRGRRHRSDPA
Ga0209180_100611141	3300027846	Vadose Zone Soil	MSHKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0209814_102995651	3300027873	Populus Rhizosphere	HKGPNRDLGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKANATLKTKFETRPLRGRCHRSDRS
Ga0307305_102981891	3300028807	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPRADAALKPKFDTRPLKGRRHRSGPF
Ga0307278_101984982	3300028878	Soil	MSHKGRNRDPGRMPREPAVTHKKPTALMEAQLESLKRNSGSELIKVGDKRLQPKADATLKTKSETRPLRGRRHRSDRS
Ga0307277_100178725	3300028881	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRGHRSDRS
Ga0307304_105645951	3300028885	Soil	MSHKGRNRDSGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0308309_119160942	3300028906	Soil	KMSHKGRNSDPGRTPLEPAATHRKPTALMEAQREALKRNPESELIKAGDKRLQPRADAALKPKFDTRPLKGRRHRSGPF
Ga0318515_105463521	3300031572	Soil	SRDNMSHKGRNRDPGRMPREPAVTHKAPTALMEAQLESLKRNSGSELIKAGDKRLQPRADATLKTKFETRSLRGRRHGSDRS
Ga0318496_107072892	3300031713	Soil	MSHKGRNRDPGRMPREPAVTHKKPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0318500_100462061	3300031724	Soil	SRDNMSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0318526_101919121	3300031769	Soil	DNMSHKGRNRDPGRMPREPAVTHKEPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0318521_105038612	3300031770	Soil	MSHKGRNRDPGRMPREPAVTHKEPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLGGRRHRSDRS
Ga0306919_102123381	3300031879	Soil	MSHKGRNRDPGRMPREPAVTHKKPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSD
Ga0318536_106976511	3300031893	Soil	PREPAVTHKEPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0306921_108197771	3300031912	Soil	NRDPGRMPHEPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDGP
Ga0318530_101507172	3300031959	Soil	SRDNMSHKGRNRDPGRMPREPAVTHKEPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0318545_102933661	3300032042	Soil	MSHKGRNRDPGRMPREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFET
Ga0318556_106760092	3300032043	Soil	DPGRMPREPAVTHKEPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0307472_1025734942	3300032205	Hardwood Forest Soil	RDPGRMSREPAVTHKKSTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFETRPLRGRRHRSDRS
Ga0306920_1032921391	3300032261	Soil	MSHKGRNRDPGRMPREPAVTHKEPTALMEAQLESLKRNSGSELIKAGDKRLQPKADATLKTKFE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097459

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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