Metagenome / Metatranscriptome Family F097532

Basic Information
Family ID	F097532
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	61 residues
Representative Sequence	MDDQQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILT
Number of Associated Samples	103
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	28.16 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	98.08 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Most Common Taxonomy
Group	Unclassified (64.423 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (27.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.29% β-sheet: 0.00% Coil/Unstructured: 84.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01245	Ribosomal_L19	87.50
PF01746	tRNA_m1G_MT	10.58
PF05239	PRC	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0335	Ribosomal protein L19	Translation, ribosomal structure and biogenesis [J]	87.50

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
All Organisms	root	All Organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
cellular organisms	root	All Organisms → cellular organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.73 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	22.12 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	0.96 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.96 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	0.96 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.96 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18401BB9KR	Not Available	533	Open in IMG/M
2170459002\|FZY7DQ102H2JZ7	Not Available	511	Open in IMG/M
3300001661\|JGI12053J15887_10446106	Not Available	620	Open in IMG/M
3300002675\|Ga0005473J37261_114941	Not Available	601	Open in IMG/M
3300004629\|Ga0008092_11271119	Not Available	522	Open in IMG/M
3300005457\|Ga0070662_100175061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1688	Open in IMG/M
3300005468\|Ga0070707_101944735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300005548\|Ga0070665_102319628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300005576\|Ga0066708_10376418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	911	Open in IMG/M
3300005587\|Ga0066654_10752628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300005718\|Ga0068866_11235694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	540	Open in IMG/M
3300006237\|Ga0097621_102208605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300006354\|Ga0075021_10796153	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006573\|Ga0074055_10017226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300006576\|Ga0074047_10009115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	680	Open in IMG/M
3300006806\|Ga0079220_11081125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300006914\|Ga0075436_100673017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	765	Open in IMG/M
3300009012\|Ga0066710_101967883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	869	Open in IMG/M
3300009101\|Ga0105247_11368849	Not Available	571	Open in IMG/M
3300009551\|Ga0105238_11276000	Not Available	760	Open in IMG/M
3300010080\|Ga0127448_164898	Not Available	649	Open in IMG/M
3300010104\|Ga0127446_1089260	Not Available	646	Open in IMG/M
3300010115\|Ga0127495_1013332	Not Available	596	Open in IMG/M
3300010117\|Ga0127449_1017255	Not Available	602	Open in IMG/M
3300010121\|Ga0127438_1018007	Not Available	633	Open in IMG/M
3300010127\|Ga0127489_1085653	Not Available	608	Open in IMG/M
3300010130\|Ga0127493_1137869	Not Available	526	Open in IMG/M
3300010133\|Ga0127459_1011479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	768	Open in IMG/M
3300010134\|Ga0127484_1058451	Not Available	575	Open in IMG/M
3300010326\|Ga0134065_10450343	Not Available	527	Open in IMG/M
3300010366\|Ga0126379_10533611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1250	Open in IMG/M
3300012199\|Ga0137383_10870317	Not Available	658	Open in IMG/M
3300012200\|Ga0137382_11129427	Not Available	559	Open in IMG/M
3300012201\|Ga0137365_11025750	Not Available	597	Open in IMG/M
3300012211\|Ga0137377_11440230	Not Available	616	Open in IMG/M
3300012359\|Ga0137385_10199920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1745	Open in IMG/M
3300012364\|Ga0134027_1123666	Not Available	653	Open in IMG/M
3300012371\|Ga0134022_1121025	Not Available	595	Open in IMG/M
3300012372\|Ga0134037_1066066	Not Available	516	Open in IMG/M
3300012393\|Ga0134052_1112957	Not Available	623	Open in IMG/M
3300012397\|Ga0134056_1164507	Not Available	653	Open in IMG/M
3300012511\|Ga0157332_1024658	Not Available	727	Open in IMG/M
3300012923\|Ga0137359_11304203	Not Available	614	Open in IMG/M
3300012924\|Ga0137413_10172463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1433	Open in IMG/M
3300012958\|Ga0164299_10166822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1237	Open in IMG/M
3300012988\|Ga0164306_10831005	Not Available	747	Open in IMG/M
3300013296\|Ga0157374_11852337	Not Available	629	Open in IMG/M
3300015358\|Ga0134089_10320492	Not Available	647	Open in IMG/M
3300016387\|Ga0182040_11131488	Not Available	657	Open in IMG/M
3300016404\|Ga0182037_10618761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	920	Open in IMG/M
3300017959\|Ga0187779_10346645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	959	Open in IMG/M
3300018468\|Ga0066662_12405161	Not Available	554	Open in IMG/M
3300020076\|Ga0206355_1387867	Not Available	631	Open in IMG/M
3300020081\|Ga0206354_10611681	Not Available	615	Open in IMG/M
3300020140\|Ga0179590_1069489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	927	Open in IMG/M
3300020580\|Ga0210403_10728866	Not Available	792	Open in IMG/M
3300021168\|Ga0210406_10647504	Not Available	820	Open in IMG/M
3300021404\|Ga0210389_11137182	Not Available	602	Open in IMG/M
3300022501\|Ga0242645_1017202	Not Available	618	Open in IMG/M
3300022510\|Ga0242652_1027240	Not Available	642	Open in IMG/M
3300022512\|Ga0242676_1023856	Not Available	653	Open in IMG/M
3300022708\|Ga0242670_1061858	Not Available	555	Open in IMG/M
3300022726\|Ga0242654_10276815	Not Available	610	Open in IMG/M
3300024254\|Ga0247661_1020287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1160	Open in IMG/M
3300025913\|Ga0207695_10360826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300025938\|Ga0207704_10200416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1460	Open in IMG/M
3300025961\|Ga0207712_11764381	Not Available	555	Open in IMG/M
3300026318\|Ga0209471_1236473	Not Available	646	Open in IMG/M
3300027031\|Ga0208986_1008502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300027119\|Ga0209522_1001038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1985	Open in IMG/M
3300027401\|Ga0208637_1010738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	928	Open in IMG/M
3300027530\|Ga0209216_1092145	Not Available	530	Open in IMG/M
3300027725\|Ga0209178_1333041	Not Available	565	Open in IMG/M
3300027765\|Ga0209073_10107167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	993	Open in IMG/M
3300027903\|Ga0209488_11177608	Not Available	518	Open in IMG/M
3300030677\|Ga0302317_10197935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	924	Open in IMG/M
3300030923\|Ga0138296_1189074	Not Available	697	Open in IMG/M
3300031093\|Ga0308197_10316376	Not Available	581	Open in IMG/M
3300031094\|Ga0308199_1114221	Not Available	609	Open in IMG/M
3300031096\|Ga0308193_1039395	Not Available	680	Open in IMG/M
3300031114\|Ga0308187_10494065	Not Available	502	Open in IMG/M
3300031446\|Ga0170820_15916803	Not Available	602	Open in IMG/M
3300031716\|Ga0310813_11077086	Not Available	736	Open in IMG/M
3300031723\|Ga0318493_10773062	Not Available	540	Open in IMG/M
3300031751\|Ga0318494_10649096	Not Available	617	Open in IMG/M
3300031765\|Ga0318554_10200987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1134	Open in IMG/M
3300031771\|Ga0318546_11322655	Not Available	506	Open in IMG/M
3300031798\|Ga0318523_10303665	Not Available	796	Open in IMG/M
3300031894\|Ga0318522_10142015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	903	Open in IMG/M
3300031947\|Ga0310909_11265078	Not Available	595	Open in IMG/M
3300032001\|Ga0306922_12057613	Not Available	555	Open in IMG/M
3300032008\|Ga0318562_10900500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	505	Open in IMG/M
3300032052\|Ga0318506_10140138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1055	Open in IMG/M
3300032054\|Ga0318570_10145141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1059	Open in IMG/M
3300032054\|Ga0318570_10500713	Not Available	554	Open in IMG/M
3300032055\|Ga0318575_10249484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	895	Open in IMG/M
3300032065\|Ga0318513_10516666	Not Available	584	Open in IMG/M
3300032805\|Ga0335078_10404557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1790	Open in IMG/M
3300033158\|Ga0335077_10155862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2614	Open in IMG/M
3300033803\|Ga0314862_0121552	Not Available	618	Open in IMG/M
3300034673\|Ga0314798_111993	Not Available	589	Open in IMG/M
3300034678\|Ga0314803_075009	Not Available	626	Open in IMG/M
3300034680\|Ga0370541_025169	Not Available	692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.42%
Host-Associated	Host-Associated	10.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.46%
Plants	Host-Associated → Plants	10.58%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Peat	Environmental → Terrestrial → Peat	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.88%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002675	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF122 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010115	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010121	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300022501	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027031	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027530	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_00551580	2124908009	Soil	MDDQQDPGILAPSPASEPDAGSGKPEPDKDAPAAKKKKSFGRELLTIVVAAAILTLL
E1_00271280	2170459002	Grass Soil	VWREGEVGGDQQDPGTLAPSPASEPDADSSKAEPDKDAPAAKKKKKSFGRELLTIVVAAAVLTLL
JGI12053J15887_104461062	3300001661	Forest Soil	MDDQEDPGTLAPAPASEPDVGSGKPEPDKDAPAAKKKKSFGRELLTIVVAAAI
Ga0005473J37261_1149412	3300002675	Forest Soil	VGGDQQDPGTLAPSPASEADADSGKAEPDKDAPPAKKKKSLGRELLTIVVAAAVLTLLVKAFIIQVYR
Ga0008092_112711191	3300004629	Tropical Rainforest Soil	MDDQEDPGALASARTSDEPAAGSGAPEPDKSAPAAKAKKKKSFGRELLTIVVAAA
Ga0070662_1001750614	3300005457	Corn Rhizosphere	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILTLLVKA
Ga0070707_1019447351	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQQDPGTLAPAPASEPDAGSSQAEPDKDAPAAKKKKSFGRELLTIVVAAAVLTLLVKAFIIQVYRIPS
Ga0070665_1023196281	3300005548	Switchgrass Rhizosphere	MDDQQDPGALAPASASGTASASEPESGSGQEEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLVKAF
Ga0066708_103764181	3300005576	Soil	MDDQQDPGTLAPAPAFEPSSASEPSSASEPDAGSGQAGPDKDAPAAKKKKSFGRELLTIV
Ga0066654_107526281	3300005587	Soil	VGGDQQDPGTLAPASTSEPDADSAKTEPDKDAPAAKKKKSFGRELLTIVVAAA
Ga0068866_112356942	3300005718	Miscanthus Rhizosphere	MDDQQDPGTLAPAPASEPESASSEPESGSDEAEPDKDAPAAKKNKKKKSFGRELLTIVVAAAILTLLVKA
Ga0097621_1022086051	3300006237	Miscanthus Rhizosphere	MDDEQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKTKKKKSFGRELLTIVVAAAILTLLVKA
Ga0075021_107961532	3300006354	Watersheds	MDDQQDPGTLAPAPTSGSASASEPDAASEPDVGSGQAGPDKDAPAAKKKKSFGRELLTIVVAAAILTL
Ga0074055_100172261	3300006573	Soil	MDDPQDPGTLAPAPASEPESGSDKAEPDNDAPAAKNKKKKSFGRELLTIVVAAAILTLLV
Ga0074047_100091152	3300006576	Soil	MDDPQDPGTLAPAPASEPESGSDKAEPDNDAPAAKKKKKKSFGRELLTIVVAAAILTLLVKAF
Ga0079220_110811252	3300006806	Agricultural Soil	MDDQQDPGTLAPAPASGPASASEPDAGSGPESGSSQTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLVKAFIIQVYRIP
Ga0075436_1006730173	3300006914	Populus Rhizosphere	MDDQQDPGTLAPAPASEPDDGSGKPEPDEDAPAAKKKKKRSFGRELLT
Ga0066710_1019678831	3300009012	Grasslands Soil	VGGDQQDPGTLAPASTSEPDADSAKTEPDKDAPAAKKKKSFGRELLTIV
Ga0105247_113688492	3300009101	Switchgrass Rhizosphere	MDDEQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILTLLVKAFII
Ga0105238_112760003	3300009551	Corn Rhizosphere	MDDEQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILTLLVKAFIIQVY
Ga0127448_1648981	3300010080	Grasslands Soil	MDDQQDPGTLAPAPASGSASASEPDADSGPESGSGRTEPDKDAPAAKKKKSFGRELLTIVVAA
Ga0127446_10892602	3300010104	Grasslands Soil	MDDQQDPGTLAPAPASGPASASEPDADSGPESGSGQTEPDKDAPAAKKKKSFGRELLTIVVAA
Ga0127495_10133322	3300010115	Grasslands Soil	MDDQQDPGTLAPAPTSEPDAVSSQAEPDEDAPAAKKKKSFGRELLTIVVAA
Ga0127449_10172552	3300010117	Grasslands Soil	MDDQQDPGTLAPAPASGPASASEPDADSGPESGSGQTEPDKDAPAAKKKKSFGRELLTIVVA
Ga0127438_10180072	3300010121	Grasslands Soil	MDDQQDPGTLAPASTSEPDADSAKTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLAKAFI
Ga0127489_10856532	3300010127	Grasslands Soil	MDDQQDPGTLAPAPASEPDAGSAEAEPDKDAPAAKKKKKKSFGRELLTIVVAA
Ga0127493_11378692	3300010130	Grasslands Soil	MDDQQDPGTLAPAPASGSASASEPDADSGPESGSGQTEPDKDAPAAKKKKSFGRELL
Ga0127459_10114793	3300010133	Grasslands Soil	MDDQQDPGTLAPAPTSEPDAGSDQAEPDEDAPAAKKKKKKSFARELLTIVVAAAIL
Ga0127484_10584512	3300010134	Grasslands Soil	MDDQQDPGTLAPAPTSEPDAGSSQAEPDKDAPAAKKKKSFGRELLTIVVAAAVLTLLVK
Ga0134065_104503431	3300010326	Grasslands Soil	MDDQQDPGTLAPPPASEPDAGSGKPESDKDAPAAKKKKKSFGRELLTIVVAAAILTLLVKAFIIQV
Ga0126379_105336111	3300010366	Tropical Forest Soil	VTDDQEDPGPLASARTSDEPASGSGAPEPDKSAPTAKAKKKKSFGRELLTIVVAAAVLTL
Ga0137383_108703172	3300012199	Vadose Zone Soil	MDDQQDPGTLAPASTSEPDADSTNTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLVKAFI
Ga0137382_111294272	3300012200	Vadose Zone Soil	MDDQQDPGTLAPASTSEPDADSTNTEPDKDAPSAKKKKSFGRELLTTV
Ga0137365_110257502	3300012201	Vadose Zone Soil	MDDQQDPGTLAPASTSEPDADSTNTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLVKAFIIQVY
Ga0137377_114402302	3300012211	Vadose Zone Soil	MDDQQDPGTLAPASTSEPDADSTNTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLVKAFIIQVYRIPSA
Ga0137385_101999201	3300012359	Vadose Zone Soil	MDDQQDPGPHASAPASEPAADKSTPEPGKSEPAAKKKKKKSFGRELLTIVVAAA
Ga0134027_11236661	3300012364	Grasslands Soil	VGGDQQDPGTLAPASTSEPDAESAKTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLAK
Ga0134022_11210252	3300012371	Grasslands Soil	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKSFGRELLTIVVA
Ga0134037_10660662	3300012372	Grasslands Soil	VGGDQQDPGTLAPASTSEPDADSAKTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLAKAFII
Ga0134052_11129571	3300012393	Grasslands Soil	MDDEQDPGTLAPAPASEPDAGSDQAEPDEDAPAAKKKKSFGRELLTIVVAAAVLTLLVKA
Ga0134056_11645071	3300012397	Grasslands Soil	MDDEQDPGTLAPAPASEPDAGSDQAEPDEDAPAAKKKKSFARELLTIVVAAAI
Ga0157332_10246583	3300012511	Soil	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVV
Ga0137359_113042032	3300012923	Vadose Zone Soil	MDDQQDPGTLAPAPASEPDDGSSQAEPDKDAPEAKKKKSFGRELLTIVVAAAVLTLLVKAFIIQV
Ga0137413_101724631	3300012924	Vadose Zone Soil	MDDQQDPGTLAPAPASGSASASEPDAGSGPESASGQTDPDKDAPAAKKKKSFGRELLTIVVAAAVLTLLVKAF
Ga0164299_101668221	3300012958	Soil	MDDQQDPGTLAPAPASGSASASEPDAGSGPEGPDKDAPAAKKKKSFCRELLTIVVA
Ga0164306_108310051	3300012988	Soil	MDDEQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKSFGRELLTIVVAAAILTLLVKAFIIQ
Ga0157374_118523372	3300013296	Miscanthus Rhizosphere	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILT
Ga0134089_103204921	3300015358	Grasslands Soil	MDDQQDPGTLAPAPTSEPDAGSDQAEPDEDAPAAKKKKSFARELLTIVVAAAILTL
Ga0182040_111314882	3300016387	Soil	VTDDQEDPGPLASARTSDEPASGAPEPGTTAPAAKARKKKSFGRELLTIVVAAAV
Ga0182037_106187611	3300016404	Soil	VTDDQEDPGPLASARTSDEPASGSPEPGTTAPAAKARKKKSFGRELLTIVVAAAILTLLVKAFVIQVYRIPSAS
Ga0187779_103466453	3300017959	Tropical Peatland	VGRPGGAGDQRDPGTLAAARTSERAAGAEAAEPGEGAPEARKKRKSLGRELLTIVLAAAVLTLLVKAFVVQVYRIPTG
Ga0066662_124051612	3300018468	Grasslands Soil	MDDQQDPGTLAPVPTSEPDTDSSKTEPDESAPAAKKKKKKSFGRELLTIVVAAAVL
Ga0206355_13878672	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQQDPGTLAPPPASEPEAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILT
Ga0206354_106116811	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILTLLVKAFIIQ
Ga0179590_10694891	3300020140	Vadose Zone Soil	MDDQQDPGTLAPAPASEPESASEPESGSDEAEPDKDAPAAKKNKKKKSFGRELLTIVVAA
Ga0210403_107288663	3300020580	Soil	VGGDQQDPGTLAPSPASEPDADSGKAEPDKDAPAAKKKKSFGRELLTIVVAAAVLTLLVKAFIIQ
Ga0210406_106475041	3300021168	Soil	VGGDQQDPGTLAPSPASEPDADSGKAEPDKDAPAAKKKKSFGRELLTIVVAAAVLTLLVK
Ga0210389_111371822	3300021404	Soil	VTDDEQDPGTLASARTSDELAAGSGEPEPDPSAPVAKAKKKKSFGRELLTIV
Ga0242645_10172021	3300022501	Soil	VGGDQQDPGTLAPSPASEADTDSGKAEPDKDAPPAKKKKSLGRELLTIVVA
Ga0242652_10272401	3300022510	Soil	MDDQQDPGTLAPAPASGSASASEPDLGSGPEGPDKDAPAAKKKKSFGRELLTIVVAAAVLTLLVKA
Ga0242676_10238561	3300022512	Soil	MDDQQDPGTLAPSPDSSKPDADSSKAEPDKDAPPAKKKKSLGRELLTIVVAAAVLTLLVKAFIIQVYRIPSA
Ga0242662_102070032	3300022533	Soil	VASARTSESATDQSKPDQDAPAAGKSKKKRSFGRELLTIVVAAAVLTLLVKAFVVQVYRI
Ga0242670_10618581	3300022708	Soil	MDDQQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKNKKKKSFGRELLTIVVAAAILTLLVKAFVIQ
Ga0242654_102768151	3300022726	Soil	MDDQQDPGTLAPAPASGSASASEPDAGSGPESGSGQADPDKDAPAAKKKKSFGRELLTI
Ga0247661_10202871	3300024254	Soil	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKSFGRELLTIVVAAAILTLLVKAFIIQ
Ga0207695_103608263	3300025913	Corn Rhizosphere	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILTLLV
Ga0207704_102004163	3300025938	Miscanthus Rhizosphere	MDDQQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKKSFGRELLTIVVAAAILT
Ga0207712_117643812	3300025961	Switchgrass Rhizosphere	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKSFGRELLTIVVAAAILTLLVK
Ga0209471_12364732	3300026318	Soil	MDDQQDPGTLAPAPAFEPSSASEPSSASEPDAGSGQAGPDKDAPAAKKKKSFGRELLTIVVAAAILTLLVKAFIIQVYRIPS
Ga0208986_10085021	3300027031	Forest Soil	MDDQQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKNKKKKSFGRELLTIVVAAAIL
Ga0209522_10010384	3300027119	Forest Soil	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKSFGRELLTIV
Ga0208637_10107383	3300027401	Soil	MDDPQDPGTLAPAPASEPESGSDKAEPDNDAPAAKNKKKKSFGRELLTIVVAAAILTLLVKAFIIQVYRI
Ga0209216_10921451	3300027530	Forest Soil	MDDEQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKKKSFGRELLTIVVAAAILTLLVKAFII
Ga0209178_13330411	3300027725	Agricultural Soil	MDDQQDPGTLAPAPASGSASASEPDAGSEPDAGSGQAGPDEDAPAAKKKKKSFGRELLTIVVA
Ga0209073_101071671	3300027765	Agricultural Soil	MDDQQDPGTLAPAPASGPASASEPDAGSGPESGSSQTEPDKDAPAAKKKKSFGRELLTIVVAAAILTLLVKAF
Ga0209488_111776082	3300027903	Vadose Zone Soil	MDDQQDPGTLAPAPASGSASASEPDAGSGPESASGQTDPDKDAPAAKKKKSFGRELLTIVVAAAIL
Ga0302317_101979353	3300030677	Palsa	VPGGGQPVDDQPDPALASARTPASAGSDAPAGDQSTPVAGKKKKSFGRELLTIVVAAAVLTLLVKA
Ga0138296_11890742	3300030923	Soil	VWREGEVGGDPQDPGTLAPSPASEPDADSEPDADSSKPDADSGKAEPDKDAPAAKKKKKSFGRELLTIVVAAAVLTQKEKEK
Ga0308197_103163762	3300031093	Soil	MDDQQDPGTLAPASASEPESASEPESGSDEAEPDKDAPAAKKNKKKKKSFGRELLTIVVAAAILT
Ga0308199_11142212	3300031094	Soil	MDDQQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKSFGRVLLTIVVAAA
Ga0308193_10393951	3300031096	Soil	MDDQQDPGTLAPASASEPESASEPESGSDEAEPDKDAPAAKKNKKKKKSFGRELLTI
Ga0308187_104940652	3300031114	Soil	MDDQQDPGTLAPPPSSEPDAGSGKPEPDKDAPAAKKKKKSFGRELLTIVVAAAIL
Ga0170820_159168032	3300031446	Forest Soil	MDDQQDPGTLAPAPASEPDAGSEGDAGSEAEPDNDAPAAKKKKKSFARELLTIVVAAAILTLLVKAFIIQVYRI
Ga0310813_110770862	3300031716	Soil	MDDQQDPGTLAPAPASEPDAGSGKPEPDKDAPAAKKKKKRSFGRELLTIVVAAAILTLLV
Ga0318493_107730621	3300031723	Soil	VTDDQEDPGTLASARTSDELASGSGAPEPDHDAPAAKARKKKSFGRELLTI
Ga0318494_106490962	3300031751	Soil	VTDDQEDPGPLASARTSDEPASGAPEPGTTAPAAKARKKKSFGRELLTIVVAAAVLTLLVKAFVI
Ga0318554_102009873	3300031765	Soil	VTDDQEDPGTLASAPASDEAAAGSGAPEPGQGARAAKTKKKKSFGRELLTIVV
Ga0318546_113226552	3300031771	Soil	VTDDQEDPGPLASARTSDEPASGAPEPGITTPAAKARKKKSFGRELLTIVVAAAVLTLLVKAFV
Ga0318523_103036653	3300031798	Soil	VTDDQEDPGTLASARTSDELASGSGAPEPDHDAPAAKARKKKSFGRELLTIVVAAAILTLLVKAFVIQVYRIP
Ga0318522_101420153	3300031894	Soil	VTDDQEDPGALASAPASDEAAAGSGAPEPGKGARAAKTKKKSFGRELLTIVVAA
Ga0310909_112650782	3300031947	Soil	MDDQQDPGTLASARTPEPAPDSADKGAPEEDKSASAGKKEKRSFGRELLTIVVAAA
Ga0306922_120576131	3300032001	Soil	VTDDQEDPGPLASARTSAEPAASSGVSEPGRGARPAQARKKSFGRELLTIVVVAAVLTLLVKAFVIQVYRIPSA
Ga0318562_109005001	3300032008	Soil	VTDDQEDPGPLASARTSDEPAARSGAPEPDRGARAAKAKKKKSFGRELLTIVVAAAVLTLLVKTFVIQVY
Ga0318506_101401383	3300032052	Soil	VTDDQEDPGTLASAPASDEAAAGSGAPEPGKGVRAAKTKKKSFGRELLTIVV
Ga0318570_101451411	3300032054	Soil	VTDDQEDPGTLASARTSDELASGSGAPEPDQDAPAAKARKKKSFGRELLTIVVAAAILTLLVKAFVIQVYRIP
Ga0318570_105007131	3300032054	Soil	MDDQQDPGTLASARTPEPAPDSADKGAPEEDKSASAGKKKKRSFGRELLTIVVAAAVLT
Ga0318575_102494843	3300032055	Soil	VTDDQEDPGPLASARTSDEPASGAPEPGITTPAAKARKKKSFGRELLTIVVAAAVLTLLVKAFVIQVYRIP
Ga0318513_105166661	3300032065	Soil	VTDDQEDPGPLASARTSDEPASGAPEPGITTPAAKARKKKSFGRELLT
Ga0335078_104045571	3300032805	Soil	VTDDSQDPGTLAPAPTSDEPSSGSGPPEPDESAPAAKAKKKKSFGRELLTIVVAAAVLTLLVKAFVIQ
Ga0335077_101558626	3300033158	Soil	VTDDEQDPGTLASARTSDEPASGSGEPEPDTSAPAGKAKKKKKSFGRELLTIVVAAAILTLLVKAFVIQV
Ga0314862_0121552_2_184	3300033803	Peatland	VTDDQEDPGPLASARTSDEPASGTPEPDPSAPAATAKKKSFGRELLTIVVAAAVLTLLVK
Ga0314798_111993_2_175	3300034673	Soil	MDDQQDPGTLAPPPASEPDAGSGKPEPDKDAPAAKKKKKSFGRELLTIVVAAAILTLL
Ga0314803_075009_445_624	3300034678	Soil	MDDQQDPGTLAPPPASEPDVGSGKPEPDKDAPAAKKKKKSFGRELLTIVVAAAILTLLVK
Ga0370541_025169_3_164	3300034680	Soil	MDDQQDPGTLAPAPASEPESGSDKAEPDQDAPAAKKKKSFGRELLTIVVAAAIL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097532

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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