NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F097618

Metagenome / Metatranscriptome Family F097618

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097618
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 49 residues
Representative Sequence MGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Number of Associated Samples 76
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.77 %
% of genes near scaffold ends (potentially truncated) 35.58 %
% of genes from short scaffolds (< 2000 bps) 71.15 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (59.615 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(14.423 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(31.731 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 64.58%    β-sheet: 0.00%    Coil/Unstructured: 35.42%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF06723MreB_Mbl 34.62
PF05670NFACT-R_1 9.62
PF04349MdoG 4.81
PF00472RF-1 2.88
PF02588YitT_membrane 1.92
PF05036SPOR 1.92
PF08367M16C_assoc 1.92
PF02633Creatininase 0.96
PF00535Glycos_transf_2 0.96
PF01970TctA 0.96
PF08338DUF1731 0.96
PF04055Radical_SAM 0.96
PF00085Thioredoxin 0.96
PF02653BPD_transp_2 0.96
PF13419HAD_2 0.96
PF10035DUF2179 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 34.62
COG1293Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domainsTranslation, ribosomal structure and biogenesis [J] 9.62
COG3131Periplasmic glucan biosynthesis protein OpgGCell wall/membrane/envelope biogenesis [M] 4.81
COG1186Protein chain release factor PrfBTranslation, ribosomal structure and biogenesis [J] 2.88
COG0216Protein chain release factor RF1Translation, ribosomal structure and biogenesis [J] 2.88
COG1284Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domainsFunction unknown [S] 1.92
COG2364Uncharacterized membrane protein YczEFunction unknown [S] 1.92
COG1026Zn-dependent peptidase, M16 (insulinase) familyPosttranslational modification, protein turnover, chaperones [O] 1.92
COG1402Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)Coenzyme transport and metabolism [H] 0.96
COG1784TctA family transporterGeneral function prediction only [R] 0.96
COG3333TctA family transporterGeneral function prediction only [R] 0.96
COG1090NAD dependent epimerase/dehydratase family enzymeGeneral function prediction only [R] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.62 %
UnclassifiedrootN/A40.38 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000786|WSSedA2C2DRAFT_1008108All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium895Open in IMG/M
3300002961|JGI11641J44799_10054155All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1152Open in IMG/M
3300003432|JGI20214J51088_10016210All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria5017Open in IMG/M
3300003910|JGI26437J51864_10000119All Organisms → cellular organisms → Bacteria22983Open in IMG/M
3300004066|Ga0055484_10032314Not Available1076Open in IMG/M
3300004481|Ga0069718_16146228All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium926Open in IMG/M
3300005145|Ga0068713_1001817All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria25245Open in IMG/M
3300005145|Ga0068713_1193753Not Available566Open in IMG/M
3300005216|Ga0068994_10013062All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1577Open in IMG/M
3300005216|Ga0068994_10030537All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1157Open in IMG/M
3300005216|Ga0068994_10093490Not Available763Open in IMG/M
3300005252|Ga0068712_1056145All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1656Open in IMG/M
3300005252|Ga0068712_1152668All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium755Open in IMG/M
3300005254|Ga0068714_10004468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria15668Open in IMG/M
3300005254|Ga0068714_10020679All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4708Open in IMG/M
3300005254|Ga0068714_10038239All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium2921Open in IMG/M
3300005254|Ga0068714_10117413All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1265Open in IMG/M
3300005254|Ga0068714_10353517All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005832|Ga0074469_10258941All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria37557Open in IMG/M
3300005832|Ga0074469_11092555Not Available1007Open in IMG/M
3300006224|Ga0079037_100017319All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4955Open in IMG/M
3300006224|Ga0079037_100040918All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3535Open in IMG/M
3300006224|Ga0079037_100408116Not Available1287Open in IMG/M
3300006224|Ga0079037_102504079Not Available514Open in IMG/M
3300006930|Ga0079303_10409290Not Available576Open in IMG/M
3300007072|Ga0073932_1010960All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria7633Open in IMG/M
3300009009|Ga0105105_10061478All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1725Open in IMG/M
3300009053|Ga0105095_10009758All Organisms → cellular organisms → Bacteria5182Open in IMG/M
3300009078|Ga0105106_10011764All Organisms → cellular organisms → Bacteria6363Open in IMG/M
3300009078|Ga0105106_10540276Not Available837Open in IMG/M
3300009078|Ga0105106_10888400Not Available634Open in IMG/M
3300009091|Ga0102851_10151452All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium2110Open in IMG/M
3300009091|Ga0102851_12621269Not Available578Open in IMG/M
3300009111|Ga0115026_10131931All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1580Open in IMG/M
3300009111|Ga0115026_10452714All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium943Open in IMG/M
3300009131|Ga0115027_10294122All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1089Open in IMG/M
3300009166|Ga0105100_10343771Not Available898Open in IMG/M
3300009167|Ga0113563_11999706Not Available692Open in IMG/M
3300009179|Ga0115028_10150322Not Available1408Open in IMG/M
3300009179|Ga0115028_10194272All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1277Open in IMG/M
3300009179|Ga0115028_11293687Not Available606Open in IMG/M
3300009504|Ga0114946_10020061All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4014Open in IMG/M
3300009504|Ga0114946_10133771All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1367Open in IMG/M
3300009581|Ga0115600_1153215Not Available830Open in IMG/M
3300010412|Ga0136852_11489560Not Available641Open in IMG/M
3300010413|Ga0136851_10162579All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium2325Open in IMG/M
3300011408|Ga0137460_1096768Not Available581Open in IMG/M
3300012152|Ga0137347_1019300All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium982Open in IMG/M
(restricted) 3300013136|Ga0172370_10292536All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium947Open in IMG/M
(restricted) 3300013137|Ga0172375_10021035All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria7463Open in IMG/M
3300017960|Ga0180429_10749198Not Available659Open in IMG/M
3300018029|Ga0187787_10277651Not Available621Open in IMG/M
3300018065|Ga0180430_10944051Not Available601Open in IMG/M
3300018068|Ga0184636_1064669All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1216Open in IMG/M
3300019252|Ga0172286_1341341Not Available544Open in IMG/M
3300020074|Ga0194113_10433296Not Available958Open in IMG/M
3300020222|Ga0194125_10449707Not Available801Open in IMG/M
3300022185|Ga0079039_1553999Not Available873Open in IMG/M
3300022554|Ga0212093_1031914All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3434Open in IMG/M
3300024056|Ga0124853_1376071All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1930Open in IMG/M
3300025135|Ga0209498_1003721All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria9056Open in IMG/M
3300025948|Ga0210088_1005062Not Available1993Open in IMG/M
3300025948|Ga0210088_1078164Not Available535Open in IMG/M
3300025950|Ga0210134_1002354Not Available2844Open in IMG/M
3300025964|Ga0210127_1004444All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1556Open in IMG/M
3300026463|Ga0256815_1028481All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium651Open in IMG/M
3300026476|Ga0256808_1001194Not Available2258Open in IMG/M
3300026501|Ga0256806_1003441All Organisms → cellular organisms → Bacteria2228Open in IMG/M
3300027536|Ga0209163_1000248All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria125551Open in IMG/M
3300027690|Ga0209164_1003356All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria15295Open in IMG/M
3300027690|Ga0209164_1023719All Organisms → cellular organisms → Bacteria → Proteobacteria3509Open in IMG/M
3300027690|Ga0209164_1108279All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1078Open in IMG/M
3300027690|Ga0209164_1117001Not Available1016Open in IMG/M
3300027713|Ga0209286_1035916Not Available1851Open in IMG/M
3300027731|Ga0209592_1131515Not Available904Open in IMG/M
3300027811|Ga0256868_10192568All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium871Open in IMG/M
3300027818|Ga0209706_10399251Not Available639Open in IMG/M
3300027871|Ga0209397_10285174Not Available786Open in IMG/M
3300027877|Ga0209293_10062966Not Available1569Open in IMG/M
3300027877|Ga0209293_10390617All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium719Open in IMG/M
3300027885|Ga0209450_10000101All Organisms → cellular organisms → Bacteria49088Open in IMG/M
3300027887|Ga0208980_10068130All Organisms → cellular organisms → Bacteria → Proteobacteria2075Open in IMG/M
3300027887|Ga0208980_10426937All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium763Open in IMG/M
3300027890|Ga0209496_10094686Not Available1264Open in IMG/M
3300027900|Ga0209253_10443353All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium978Open in IMG/M
3300027979|Ga0209705_10008679All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria5517Open in IMG/M
3300029827|Ga0134606_10002067All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria8699Open in IMG/M
3300031577|Ga0316602_10038059All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium761Open in IMG/M
3300031834|Ga0315290_10746896Not Available840Open in IMG/M
3300032163|Ga0315281_10341926Not Available1624Open in IMG/M
3300033406|Ga0316604_10526857All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium650Open in IMG/M
3300033413|Ga0316603_12367590Not Available500Open in IMG/M
3300033414|Ga0316619_10772169Not Available818Open in IMG/M
3300033416|Ga0316622_101054642All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium949Open in IMG/M
3300033418|Ga0316625_100061407All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300033418|Ga0316625_100749024Not Available829Open in IMG/M
3300033419|Ga0316601_100094653All Organisms → cellular organisms → Bacteria2393Open in IMG/M
3300033481|Ga0316600_10001759All Organisms → cellular organisms → Bacteria9832Open in IMG/M
3300033481|Ga0316600_11074991Not Available570Open in IMG/M
3300033482|Ga0316627_101063415All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → unclassified Hydrogenophaga → Hydrogenophaga sp. T4790Open in IMG/M
3300033483|Ga0316629_11063819All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium639Open in IMG/M
3300033485|Ga0316626_10286901Not Available1334Open in IMG/M
3300033485|Ga0316626_10295103All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium1317Open in IMG/M
3300033513|Ga0316628_101576064All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium875Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil14.42%
Enrichment CultureEngineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture13.46%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland11.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment9.62%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands8.65%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands7.69%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland4.81%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment2.88%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment2.88%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment2.88%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.92%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.92%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.92%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment1.92%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.92%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.92%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.92%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment1.92%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.96%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.96%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.96%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000786Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A2 CattailEnvironmentalOpen in IMG/M
3300002961Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300003910Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LWEnvironmentalOpen in IMG/M
3300004066Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005145Enrichment culture microbial communities om Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS2 (Arthur Kill Sulfidogenic replicate 2) MetaGEngineeredOpen in IMG/M
3300005216Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2EnvironmentalOpen in IMG/M
3300005252Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS1 (Arthur Kill Sulfidogenic replicate 1) MetaGEngineeredOpen in IMG/M
3300005254Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaGEngineeredOpen in IMG/M
3300005832Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBBEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300007072Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaGEnvironmentalOpen in IMG/M
3300009009Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009504Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep SedimentEnvironmentalOpen in IMG/M
3300009581Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300010413Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9EnvironmentalOpen in IMG/M
3300011408Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT723_2EnvironmentalOpen in IMG/M
3300012152Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT590_2EnvironmentalOpen in IMG/M
3300013136 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.5mEnvironmentalOpen in IMG/M
3300013137 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1mEnvironmentalOpen in IMG/M
3300017960Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_S_1 metaGEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018065Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_S_2 metaGEnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300019252Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300022185Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022554Dewar_combined assemblyEnvironmentalOpen in IMG/M
3300024056Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300025135Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)EnvironmentalOpen in IMG/M
3300025948Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025950Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025964Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026463Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS6EnvironmentalOpen in IMG/M
3300026476Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR6EnvironmentalOpen in IMG/M
3300026501Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR4EnvironmentalOpen in IMG/M
3300027536Enrichment culture microbial communities om Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKS2 (Arthur Kill Sulfidogenic replicate 2) MetaG (SPAdes)EngineeredOpen in IMG/M
3300027690Enrichment culture microbial communities from rom New York Harbor, USA that are MTBE-degrading - MTBE-NYH (New York Harbor Sulfidogenic) MetaG (SPAdes)EngineeredOpen in IMG/M
3300027713Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027811Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeqEnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300029827Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047EnvironmentalOpen in IMG/M
3300031577Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CTEnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
WSSedA2C2DRAFT_100810813300000786WetlandMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLW
JGI11641J44799_1005415533300002961WetlandMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA*
JGI20214J51088_1001621033300003432WetlandMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPECQIGRLWLMDKAA*
JGI26437J51864_10000119143300003910Freshwater Lake SedimentMAEENLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA*
Ga0055484_1003231413300004066Natural And Restored WetlandsMGEEKLEKRFEEAEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0069718_1614622823300004481SedimentMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPQCQIGR
Ga0068713_100181743300005145Enrichment CultureMSEEKAQKLTEDMEVRCDVCRKTFPPSEEGKRCPECGIGRIWSMQKAA*
Ga0068713_119375313300005145Enrichment CultureMGEEKREKSFEDMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA*
Ga0068994_1001306223300005216Natural And Restored WetlandsMGEENLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMEKAA*
Ga0068994_1003053713300005216Natural And Restored WetlandsMGEEKREKGFEGMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA*
Ga0068994_1009349013300005216Natural And Restored WetlandsMGEEKREKGFEDMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA*
Ga0068712_105614533300005252Enrichment CultureMGEEKREKGFEDMEVRCDVCRKTFPLSEEGKRCPACNIGRLWLMDKAA*
Ga0068712_115266813300005252Enrichment CultureMSEERAEKLAEGMEVRCDVCRKTFPLSEAGKQCPECGIGRIW
Ga0068714_10004468103300005254Enrichment CultureMSEERAERLAEATEVRCDVCRKVFPPSEEGRKCPECGIGRLWLMEKAA*
Ga0068714_1002067933300005254Enrichment CultureMEEERAARLTEDSEVRCDVCRKTFPPSEQGKQCPECRIGRLWLMEKAA*
Ga0068714_1003823933300005254Enrichment CultureMSEEKAQKLAEDMEVRCDVCRKTFPPSEEGKRCPECGIGRIWSMEKAA*
Ga0068714_1011741313300005254Enrichment CultureMGEEKREKGFENMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA*
Ga0068714_1035351713300005254Enrichment CultureMSEERAASGSENTEVRCDVCRKTFPAEEQGKQCPECKIGRLWLMEKAVS*
Ga0074469_10258941223300005832Sediment (Intertidal)MGEEKLEKRFEAMEVRCDVCRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0074469_1109255513300005832Sediment (Intertidal)HMSEERAEKFAENMEVRCDVCRKIFPASEEGKRCPECGIGRIWLMEKAA*
Ga0079037_10001731983300006224Freshwater WetlandsMGEEKLEKRFEDTEVRCDICRKTFPLSEEGKKCPECHIGRLWLMDKAA*
Ga0079037_10004091823300006224Freshwater WetlandsMGEQKLEKRFEEVEVRCDICRKIFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0079037_10040811613300006224Freshwater WetlandsLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA*
Ga0079037_10250407913300006224Freshwater WetlandsSFSSSLTRRLAMGEEKLEKRFEELEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0079303_1040929013300006930Deep SubsurfaceMGEQKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0073932_101096083300007072Hot Spring SedimentMGDEKREKGFENMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA*
Ga0105105_1006147833300009009Freshwater SedimentMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPQCQIGRLWLMEKAA*
Ga0105095_1000975833300009053Freshwater SedimentVSLLSLNLYKRRLAMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPQCQIGRLWLMEKAA*
Ga0105106_1001176413300009078Freshwater SedimentIAVPLFKKLSPVSLLSLNLYKRRLAMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPQCQIGRLWLMEKAA*
Ga0105106_1054027613300009078Freshwater SedimentMGEEKLEKRFEAMEVRCDICRKTFPLSEEGKKCPECHLGRLWLMDKAA*
Ga0105106_1088840013300009078Freshwater SedimentMGEEKLEKRFEDMEVRCDICRKIFPLSEEGKKCPECHIGCLWLMDKAA*
Ga0102851_1015145223300009091Freshwater WetlandsMAEEKLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA*
Ga0102851_1262126913300009091Freshwater WetlandsMAEENLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0115026_1013193133300009111WetlandMGEEKLEKRFEELEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0115026_1045271433300009111WetlandMGEEKLEKRFEDTEVRCDICRKTFPLSEEGKKCPECHIGRLWLMDKAP*
Ga0115027_1029412213300009131WetlandMGEEKLEKRFEEAEVRCDICRKTFPLSEEGKKCPECQIG
Ga0105100_1034377113300009166Freshwater SedimentLAVGEEKLEKRFEDLEVRCDICRKTFPLSEEGKKCPECNIGRLWLMDKAA*
Ga0113563_1199970613300009167Freshwater WetlandsVSLLSLDLYKRRLAMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0115028_1015032223300009179WetlandMGEEKLEKRFEELEVRCDICRKTFPLSEEGKKCPECHIGRLWLMDKAP*
Ga0115028_1019427213300009179WetlandMGEEKLEKRFEDTEVRCDICRKTFPLSQEGKKCPECQIGR
Ga0115028_1129368723300009179WetlandVSSFSSSLTRRSAMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0114946_1002006133300009504SedimentMEEERAARRTEDSEVRCDVCRKTFPPSEQGKQCPECRIGRLWLMEKAA*
Ga0114946_1013377133300009504SedimentMSEEREATRAEDMEVRCDVCRKSFPPSEQGKQCPD
Ga0115600_115321513300009581WetlandVSSYSSSPTRRLAMAEEKLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA*
Ga0136852_1148956023300010412Mangrove SedimentSFSSSLPRRFAMGEEKREKGFEDMEVRCDVCRKTFPLSEEGKRCPACNIGRLWLMDKAA*
Ga0136851_1016257923300010413Mangrove SedimentMGQEKLEKRLEAVEVRCDVCRKTFPLSEEGKKCPECQIGRLWLMDKAA*
Ga0137460_109676823300011408SoilMGEEKLEKRFEDLEVRCDLCRKTFPLYEAGKKCPECNIGRLWLMDKAA*
Ga0137347_101930023300012152SoilMGEEKLEKRFEDLEVRCDICRKTFPLSEEGKECPECNIGRLWLMDKAA*
(restricted) Ga0172370_1029253613300013136FreshwaterMGEEKLEKRFEEVEVRCDVCRKTYPLSEEGKRCPECQIGRLWLMEKAA*
(restricted) Ga0172375_1002103553300013137FreshwaterMGEEKLEKRFEEVEVRSDVCRKTYPLSEEGKRCPECQIGRLWLMEKAA*
Ga0180429_1074919813300017960Hypersaline Lake SedimentDMEVRCDVCRKTFPPSEQGKQCPECRIGRLWLMEKAA
Ga0187787_1027765123300018029Tropical PeatlandMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0180430_1094405113300018065Hypersaline Lake SedimentMNEERAARHAEDMEVRCDVCRKTFPPSEQGKQCPECRIGRLWLMEKAA
Ga0184636_106466933300018068Groundwater SedimentMGEEKLEKRFEDLEVRCDICRKTFPLSEEGKECPECNIGRLWLMDKAA
Ga0172286_134134113300019252WetlandGVSSFSSSLTRRLAMGEQKLEKRFEEVEVRCDICRKIFPLSEEGKKCPECQIGRLWLMDKAA
Ga0194113_1043329613300020074Freshwater LakeMGKEKEQKNLEGMEVRCDVCRKTFPVSEEGKKCPDCGIGRLWLMEKAA
Ga0194125_1044970713300020222Freshwater LakeMGKEKEQKNLEGMEVRCDVCRKTFTLSEEGKKCPDCGIGRLWLMEKAA
Ga0079039_155399913300022185Freshwater WetlandsSSPTRRLAMAEEKLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA
Ga0212093_103191463300022554Hot Spring SedimentMGDEKREKGFENMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA
Ga0124853_137607123300024056Freshwater WetlandsMGEQKLEKRFEEVEVRCDICRKIFPLSEEEKVPECQIGRLWLMDKAA
Ga0209498_100372133300025135SedimentMEEERAARRTEDSEVRCDVCRKTFPPSEQGKQCPECRIGRLWLMEKAA
Ga0210088_100506233300025948Natural And Restored WetlandsMGEEKLEKRFEEAEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0210088_107816433300025948Natural And Restored WetlandsMGEEKREKGFEGMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA
Ga0210134_100235423300025950Natural And Restored WetlandsMGEEKLEKRFEAMEVRCDVCRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0210127_100444413300025964Natural And Restored WetlandsMGEEKLEKRFEAMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA
Ga0256815_102848133300026463SedimentMGEEKLEKRFEDVEVRCDICRKTFPLSEEGKKCPECGIGRLWLMDKAA
Ga0256808_100119443300026476SedimentMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQLGRLWLMDKAA
Ga0256806_100344133300026501SedimentRRLAMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQLGRLWLMDKAA
Ga0209163_10002481463300027536Enrichment CultureMSEEKAQKLTEDMEVRCDVCRKTFPPSEEGKRCPECGIGRIWSMQKAA
Ga0209164_100335673300027690Enrichment CultureMSEERAERLAEATEVRCDVCRKVFPPSEEGRKCPECGIGRLWLMEKAA
Ga0209164_102371933300027690Enrichment CultureMGEEKREKGFENMEVRCDVCRKTFPLSEEGKRCPECNIGRLWLMDKAA
Ga0209164_110827913300027690Enrichment CultureMSEEKAQKLAEDMEVRCDVCRKTFPPSEEGKRCPECGIGRIWSMEKAA
Ga0209164_111700133300027690Enrichment CultureMGEEKREKGFEDMEVRCDVCRKTFPLSEEGKRCPACNIGRLWLMDKAA
Ga0209286_103591623300027713Freshwater SedimentMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPQCQIGRLWLMEKAA
Ga0209592_113151513300027731Freshwater SedimentKRFEDLEVRCDICRKTFPLSEEGKKCPECNIGRLWLMDKAA
Ga0256868_1019256833300027811SoilMGEEKLEKRFEDTEVRCDICRKTFPLSEEGKKCPECHIGRLWLMD
Ga0209706_1039925123300027818Freshwater SedimentMGEEKLEKRFEAMEVRCDICRKTFPLSEEGKKCPECHLGRLWLMDKAA
Ga0209397_1028517413300027871WetlandGVSSFSSSLTRRSAMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0209293_1006296633300027877WetlandRLAMAEEKLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA
Ga0209293_1039061713300027877WetlandMGEEKLEKRFEDTEVRCDICRKTFPLSEEGKKCPECHIGRLWLMDKAA
Ga0209450_10000101443300027885Freshwater Lake SedimentMAEENLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA
Ga0208980_1006813043300027887WetlandMEEEKLEKCFDEVEVRCDICRKTFPPSEEGKKCPECQIGRLWLMDKAA
Ga0208980_1042693723300027887WetlandMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLM
Ga0209496_1009468623300027890WetlandMGEEKLEKRFEDTEVRCDICRKTFPLSEEGKKCPECHIGRLWLMDKAP
Ga0209253_1044335313300027900Freshwater Lake SedimentLAVGEEKLEKRFEDLEVRCDICRKNFPLSEEGKKCPECNIGRLWLMDKAA
Ga0209705_1000867933300027979Freshwater SedimentVSLLSLNLYKRRLAMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPQCQIGRLWLMEKAA
Ga0134606_1000206773300029827Marine SedimentMSEERAERLTEDTEVRCDVCRKTFPPSEEGKRCPECGIGRIWLMEKAA
Ga0316602_1003805913300031577SoilMAEENLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLW
Ga0315290_1074689623300031834SedimentMGEEKLEKRFEDLEVRCDICRKNFPLSEEGKKCPECNIGRLWLMDKAA
Ga0315281_1034192633300032163SedimentLAVGEEKLEKRFEDLEVRCDICRKTFPLSEEGKKCPECNIGRLWLMDKAA
Ga0316604_1052685733300033406SoilMGEEKLEKRFEELEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0316603_1236759023300033413SoilMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0316619_1077216923300033414SoilMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECHIGRLWLMDKAA
Ga0316622_10105464213300033416SoilMAEEKLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKA
Ga0316625_10006140753300033418SoilMGEQKLEKRFEEVEVRCDICRKIFPLSEEGKKCPECQIGRLWLMDKAA
Ga0316625_10074902413300033418SoilLKRRFAMGEEKLEKRFEDTEVRCDICRKTFPLSEEGKKCPECHIGRLWLMDKAA
Ga0316601_10009465313300033419SoilKRRLAMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0316600_1000175953300033481SoilMAEENLEKRFEEVEVRCDICRKTFPLSQEGKKCPVCQIGRLWLMDKAA
Ga0316600_1107499113300033481SoilRRLAMGEEKLEKRFEELEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0316627_10106341513300033482SoilRRLAMGEEKLEKRFEEAEVRCDVCRKTFPLSEEGKKCPECQIGRLWLMDKAA
Ga0316629_1106381913300033483SoilMGEEKLEKRFEEVEVRCDICRKTFPLSEEGKKCPECQIGRL
Ga0316626_1028690123300033485SoilYSSSPTRRLAMAEEKLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKAA
Ga0316626_1029510313300033485SoilMAEENLEKRFEEVEVRCDICRKTFPLSQEGKKCPECQIGRLWLMDKA
Ga0316628_10157606423300033513SoilMEEEKLEKCYDEVEVRCDICRKTFPLSEEGKKCPECQIGRLWLMDK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.