Metagenome / Metatranscriptome Family F097736

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097736
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	116 residues
Representative Sequence	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQQRRIDRMCLKHGFVSLLELSGLAETPVLGTLEQRPPMETGLPPRRPSQSVSRAVGTFAADIQQRS
Number of Associated Samples	61
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.85 %
% of genes near scaffold ends (potentially truncated)	17.31 %
% of genes from short scaffolds (< 2000 bps)	55.77 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (33.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.47% β-sheet: 6.94% Coil/Unstructured: 64.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07238	PilZ	18.27
PF01479	S4	9.62
PF01590	GAF	2.88
PF01810	LysE	2.88
PF00581	Rhodanese	1.92
PF01740	STAS	1.92
PF00072	Response_reg	0.96
PF13418	Kelch_4	0.96
PF13519	VWA_2	0.96
PF00873	ACR_tran	0.96
PF14833	NAD_binding_11	0.96
PF13660	DUF4147	0.96
PF14659	Phage_int_SAM_3	0.96
PF13565	HTH_32	0.96
PF12728	HTH_17	0.96
PF13415	Kelch_3	0.96
PF13517	FG-GAP_3	0.96
PF02445	NadA	0.96
PF00875	DNA_photolyase	0.96
PF00154	RecA	0.96
PF13304	AAA_21	0.96
PF07687	M20_dimer	0.96
PF08240	ADH_N	0.96
PF01663	Phosphodiest	0.96
PF07732	Cu-oxidase_3	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.96
COG0415	Deoxyribodipyrimidine photolyase	Replication, recombination and repair [L]	0.96
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.96
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	85.58 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.88 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10015989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4790	Open in IMG/M
3300000567\|JGI12270J11330_10025338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3574	Open in IMG/M
3300004080\|Ga0062385_10437122	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300004092\|Ga0062389_102812814	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300004152\|Ga0062386_100328267	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300004631\|Ga0058899_11874070	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300004635\|Ga0062388_100144217	All Organisms → cellular organisms → Bacteria → Acidobacteria	1794	Open in IMG/M
3300005541\|Ga0070733_10014480	All Organisms → cellular organisms → Bacteria	4953	Open in IMG/M
3300005712\|Ga0070764_10018423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3467	Open in IMG/M
3300005712\|Ga0070764_10122480	All Organisms → cellular organisms → Bacteria → Acidobacteria	1408	Open in IMG/M
3300005712\|Ga0070764_10495436	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300005921\|Ga0070766_10367567	All Organisms → cellular organisms → Bacteria → Acidobacteria	937	Open in IMG/M
3300006176\|Ga0070765_100142979	All Organisms → cellular organisms → Bacteria	2126	Open in IMG/M
3300006176\|Ga0070765_100159746	All Organisms → cellular organisms → Bacteria → Acidobacteria	2018	Open in IMG/M
3300011120\|Ga0150983_11154442	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300017822\|Ga0187802_10001115	All Organisms → cellular organisms → Bacteria → Acidobacteria	7075	Open in IMG/M
3300017942\|Ga0187808_10121521	All Organisms → cellular organisms → Bacteria → Acidobacteria	1142	Open in IMG/M
3300017943\|Ga0187819_10248603	All Organisms → cellular organisms → Bacteria → Acidobacteria	1041	Open in IMG/M
3300017943\|Ga0187819_10688905	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300017943\|Ga0187819_10737824	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300017947\|Ga0187785_10034062	All Organisms → cellular organisms → Bacteria → Acidobacteria	1856	Open in IMG/M
3300017955\|Ga0187817_10049924	All Organisms → cellular organisms → Bacteria → Acidobacteria	2576	Open in IMG/M
3300017955\|Ga0187817_10591261	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300017955\|Ga0187817_10745508	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300017959\|Ga0187779_10405113	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300017961\|Ga0187778_10029077	All Organisms → cellular organisms → Bacteria	3377	Open in IMG/M
3300017961\|Ga0187778_10559411	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300017973\|Ga0187780_10034121	All Organisms → cellular organisms → Bacteria → Acidobacteria	3580	Open in IMG/M
3300017973\|Ga0187780_10106941	All Organisms → cellular organisms → Bacteria → Acidobacteria	1928	Open in IMG/M
3300017974\|Ga0187777_11047071	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300017975\|Ga0187782_10058805	All Organisms → cellular organisms → Bacteria → Acidobacteria	2798	Open in IMG/M
3300018006\|Ga0187804_10286866	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300018006\|Ga0187804_10487819	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300018042\|Ga0187871_10060327	All Organisms → cellular organisms → Bacteria → Acidobacteria	2252	Open in IMG/M
3300018085\|Ga0187772_10001120	All Organisms → cellular organisms → Bacteria	12524	Open in IMG/M
3300018085\|Ga0187772_10031634	All Organisms → cellular organisms → Bacteria → Acidobacteria	3149	Open in IMG/M
3300018085\|Ga0187772_10141423	All Organisms → cellular organisms → Bacteria → Acidobacteria	1584	Open in IMG/M
3300018085\|Ga0187772_10201245	All Organisms → cellular organisms → Bacteria → Acidobacteria	1338	Open in IMG/M
3300018085\|Ga0187772_10217274	All Organisms → cellular organisms → Bacteria → Acidobacteria	1289	Open in IMG/M
3300018085\|Ga0187772_10381928	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300018085\|Ga0187772_11259963	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300018086\|Ga0187769_10002471	All Organisms → cellular organisms → Bacteria	10840	Open in IMG/M
3300018086\|Ga0187769_10012391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5486	Open in IMG/M
3300018086\|Ga0187769_10672056	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300018088\|Ga0187771_10090157	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300018088\|Ga0187771_10250021	All Organisms → cellular organisms → Bacteria → Acidobacteria	1479	Open in IMG/M
3300018088\|Ga0187771_10374557	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300018090\|Ga0187770_10131343	All Organisms → cellular organisms → Bacteria → Acidobacteria	1896	Open in IMG/M
3300018090\|Ga0187770_10136783	All Organisms → cellular organisms → Bacteria → Acidobacteria	1858	Open in IMG/M
3300018090\|Ga0187770_10842368	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300018090\|Ga0187770_11715160	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300020579\|Ga0210407_10059850	All Organisms → cellular organisms → Bacteria → Acidobacteria	2851	Open in IMG/M
3300020579\|Ga0210407_10435881	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300020579\|Ga0210407_10891795	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300020580\|Ga0210403_10020570	All Organisms → cellular organisms → Bacteria	5266	Open in IMG/M
3300020580\|Ga0210403_10824119	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300020582\|Ga0210395_10035406	All Organisms → cellular organisms → Bacteria → Acidobacteria	3661	Open in IMG/M
3300020583\|Ga0210401_10125632	All Organisms → cellular organisms → Bacteria → Acidobacteria	2405	Open in IMG/M
3300020583\|Ga0210401_10640626	All Organisms → cellular organisms → Bacteria → Acidobacteria	924	Open in IMG/M
3300021168\|Ga0210406_10000564	All Organisms → cellular organisms → Bacteria	50038	Open in IMG/M
3300021171\|Ga0210405_10009099	All Organisms → cellular organisms → Bacteria	8536	Open in IMG/M
3300021407\|Ga0210383_11693442	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300021420\|Ga0210394_10000386	All Organisms → cellular organisms → Bacteria	97043	Open in IMG/M
3300021420\|Ga0210394_11797080	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300021433\|Ga0210391_10118277	All Organisms → cellular organisms → Bacteria → Acidobacteria	2086	Open in IMG/M
3300021559\|Ga0210409_11395513	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300022714\|Ga0242671_1117307	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300027570\|Ga0208043_1110184	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300027729\|Ga0209248_10187705	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300027829\|Ga0209773_10303520	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300027854\|Ga0209517_10058023	All Organisms → cellular organisms → Bacteria → Acidobacteria	2851	Open in IMG/M
3300027879\|Ga0209169_10007341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6288	Open in IMG/M
3300027879\|Ga0209169_10133995	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300027889\|Ga0209380_10542487	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300027908\|Ga0209006_10237487	All Organisms → cellular organisms → Bacteria → Acidobacteria	1572	Open in IMG/M
3300030659\|Ga0316363_10001585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	19528	Open in IMG/M
3300031720\|Ga0307469_10011907	All Organisms → cellular organisms → Bacteria	4323	Open in IMG/M
3300032180\|Ga0307471_101521490	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300032770\|Ga0335085_10134608	All Organisms → cellular organisms → Bacteria → Acidobacteria	3130	Open in IMG/M
3300032770\|Ga0335085_10721982	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300032782\|Ga0335082_10052546	All Organisms → cellular organisms → Bacteria	4206	Open in IMG/M
3300032782\|Ga0335082_10084818	All Organisms → cellular organisms → Bacteria	3175	Open in IMG/M
3300032782\|Ga0335082_10088585	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300032782\|Ga0335082_10817479	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300032783\|Ga0335079_10055542	All Organisms → cellular organisms → Bacteria → Acidobacteria	4523	Open in IMG/M
3300032783\|Ga0335079_10093596	All Organisms → cellular organisms → Bacteria → Acidobacteria	3408	Open in IMG/M
3300032783\|Ga0335079_10182874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2335	Open in IMG/M
3300032783\|Ga0335079_11508315	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300032805\|Ga0335078_10014110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11849	Open in IMG/M
3300032805\|Ga0335078_10017467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10659	Open in IMG/M
3300032805\|Ga0335078_10043056	All Organisms → cellular organisms → Bacteria → Acidobacteria	6695	Open in IMG/M
3300032805\|Ga0335078_10995544	All Organisms → cellular organisms → Bacteria → Acidobacteria	993	Open in IMG/M
3300032829\|Ga0335070_10127623	All Organisms → cellular organisms → Bacteria → Acidobacteria	2620	Open in IMG/M
3300032829\|Ga0335070_11765171	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300032892\|Ga0335081_10003347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	25224	Open in IMG/M
3300032892\|Ga0335081_10163776	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300032892\|Ga0335081_10260938	All Organisms → cellular organisms → Bacteria → Acidobacteria	2330	Open in IMG/M
3300032898\|Ga0335072_10229349	All Organisms → cellular organisms → Bacteria → Acidobacteria	2161	Open in IMG/M
3300033004\|Ga0335084_10001116	All Organisms → cellular organisms → Bacteria → Acidobacteria	24487	Open in IMG/M
3300033158\|Ga0335077_10501869	All Organisms → cellular organisms → Bacteria → Acidobacteria	1283	Open in IMG/M
3300033803\|Ga0314862_0160656	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300033805\|Ga0314864_0120260	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300033807\|Ga0314866_013003	All Organisms → cellular organisms → Bacteria → Acidobacteria	1137	Open in IMG/M
3300033808\|Ga0314867_005734	All Organisms → cellular organisms → Bacteria → Acidobacteria	2893	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.65%
Aquatic	Environmental → Aquatic	16.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.65%
Freshwater	Environmental → Aquatic → Freshwater	16.35%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	49.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.35%
Loam	Environmental → Terrestrial → Soil → Loam	11.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	49.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.77%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	24.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	21.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100159893	3300000567	Peatlands Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQQRKIDRMCLRHGFVSLLELNGLAETPVLGTLEQRPPMETGLPLRRPSHSVSRAVGTFAADIQQRS*
JGI12270J11330_100253384	3300000567	Peatlands Soil	MLMQTLFAGVLRVLTPLGPRYVNPSFVQRIYLLWIFRNFHTLSVRVLSLRQQRWIEMICAEHGFVSLPDLHAFEETPVLGTLEQRPTETGSLPPRRPSQSVSGAVTFAADMQQRS*
Ga0062385_104371222	3300004080	Bog Forest Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQRRKIDRMCLKHGFVSLQELNGLAETPVLGTLEQRPPMETGLPPRRPSQSVPEAVGIFAADIRQRS*
Ga0062389_1028128141	3300004092	Bog Forest Soil	MLLDKLSQGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRPRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRPSHGVARAVGTFAADIQQRS*
Ga0062386_1003282671	3300004152	Bog Forest Soil	MAALELLWFKATKPDRVWVNPAMWMETLFAGVLRVLTPLGPRYVNPSLPQRVYLLWIFRNFHTLPAKVLSLRQQRWIDRMCAERGFVSLFATNGLGEMPVLGTLEQRPPTEPASLPPRRPSQNVQDAVPAFATDLRQRS*
Ga0058899_118740702	3300004631	Forest Soil	LWFKAIETKRPRKLGMWLDKVSRGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRSSQGVASAVGTFAADIQQRS*
Ga0062388_1001442173	3300004635	Bog Forest Soil	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLTPRQQKRIDNICARHGFVSLPAVNDLAEPAILGTLEQRPSIESRDLSQRKPNQSVSDAMRPFATDVQQRS*
Ga0070733_100144802	3300005541	Surface Soil	MLLDKLCQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQQRKIDRMCLKHGFVSLLELNGLSETPVLGTLEQRPPMESGLPPRRPAQSIPRAVGTFVADIQQRS*
Ga0070764_100184235	3300005712	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPYQQRRIDRMCLKHGFVSLLELSGLAETPVLGTLEQRPPMETSLPPRRPSQSVVRAVGTFAADIQQRS*
Ga0070764_101224803	3300005712	Soil	MLLDRLTQGVLRVLTPLGPRYVNPSFFQRLYLVWIFRNFHTLPLKVLRPHQQRKIDRMCLKHGFVSLSELNGLADTPVLGTLEQRPPMEASLPPRRASQGVSRAVGTFAADIQQRS*
Ga0070764_104954361	3300005712	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQRRKIDRMCLKHGFVSLPELNGLAETPVLGTLEQRPPMENGLPPRRPSQSIPEAVGIFAADIRQRS*
Ga0070766_103675672	3300005921	Soil	MWLDKLSQGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLPRRQQRKIDRMCLKHGFVSLLDLNGLEETPVLGTLEQRPPMETALPPRRASQSVSQAVGTFAADIRQRS*
Ga0070765_1001429793	3300006176	Soil	MLLDRLTQGVLRVLTPLGPRYVNPSFFQRLYLVWIFRNFHTLPLKVLRPHQQRKIDRMCLKHGFVSLAELNGLADTPVLGTLEQRPPMEASLPPRRASQGVSRAVGTFAADIQQRS*
Ga0070765_1001597461	3300006176	Soil	MWLDKVSRGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRSSQGVASAVGTFAADIQQRS*
Ga0150983_111544421	3300011120	Forest Soil	VQGNRYQALGEIGMWLDKLSQGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLPRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETALPPRRASQSVSQAVGTFAADIRQRS*
Ga0187802_100011153	3300017822	Freshwater Sediment	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSRRQQKRIDGMCAQHGFVSLLELNELAEPAILGTLEQRPPLGPENPRPNQSVSDVMRPFATDAQQRS
Ga0187808_101215212	3300017942	Freshwater Sediment	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSPRQQKRIDGMCTQHGFVSLLELNELAEPAILGTLEQRPPLGPENPRPNQSVSDVMRPFATDAQQRS
Ga0187819_102486032	3300017943	Freshwater Sediment	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPIKVLSSRQQKRIDRICAQHGFVSLLELNELADPAILGTLEQRPPLESESLQAQRTSQSVSDAMRPFAADVQPRS
Ga0187819_106889051	3300017943	Freshwater Sediment	MLMQTLFAGVLRVLTPLGPRYVNPSFVQRIYLLWIFRNFHTLSVRVLSLRQQRWIEMICSEHGFVSLPDLHAFEETPVLGTLEQRPTETGSLPPRRPSQSVSGAVAPFAADMQQRS
Ga0187819_107378241	3300017943	Freshwater Sediment	ALELLWFKSRYRSLTRVIVAMWLEKLSQGVLRVLTPLGPRYVSPTFVQRLYLLWIFRNFHTLPVKVLSRRQRRRIDRMCIRHGFVPPRELGGLSETPVLGTLEQRPPLETQSLPPRRPSQSVSGAPFAADVQQRT
Ga0187785_100340621	3300017947	Tropical Peatland	MWLEKLSFGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPAKVLSPRQQRRIDRICAQHGFVSLLELHELAILGTLEQRPPRESEGLPPRRASQSVSSVMGHFAGDAQQGS
Ga0187817_100499241	3300017955	Freshwater Sediment	AMWLEKLSQGVLRVLTPLGPRYVSPTFVQRLYLLWIFRNFHTLPVKVLSRRQRRRIDRMCIRHGFVPPRQLGGLSETPVLGTLEQRPPLEAQSLPPRRPSQSVSGAPFAADVQQRT
Ga0187817_105912612	3300017955	Freshwater Sediment	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSSRQQKRIDGICAQHGFVSLLELNELAEPAILGTLEQRPPLESESLQAQRTSQSVSDAMRPFAADVQPRS
Ga0187817_107455082	3300017955	Freshwater Sediment	TMWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSRRQQKRIDGMCAQHGFVSLLELNELAEPAILGTLEQRPPLGPENPRPNQSVSDVMRPFATDAQQRS
Ga0187779_104051132	3300017959	Tropical Peatland	MLALELLWFKTSLAYDSGNSVMWMEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSSRQRKRIDRMCAQHGYVSLLVLNERAEPTILGTLEQRPPIETEILSHPRPSQGMRGAVPPFAADAQQRS
Ga0187778_100290773	3300017961	Tropical Peatland	MWLEKLSLGVLRVLTPLGPRYVNPSLVQRLYLLWIFRNFHTLPVKVLSPRQQKRIDSMCAQHGFVSLVELNELAEPTILGTLEQRPPLGSENPRPSQSVSDVMRPFATDAQQRS
Ga0187778_105594112	3300017961	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVKPSFAQRLYLLWIFRNFHTLPAKVLSLRQQKWIDRICAAHGFASLFEPNGLSEIPLLGTLEQRPPLEPLALPPRRPSQSVPGAMPPFVVDAQQRS
Ga0187780_100341214	3300017973	Tropical Peatland	MWMEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSSRQRKRIDRMCAQHGYVSLLVLNERAEPTILGTLEQRPPIETEILSHPRPSQGMRGAVPPFAADAQQRS
Ga0187780_101069412	3300017973	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVKPSFAQRLYLLWIFRNFHTLPARVLSLRQQKWIDRICAAHGFASLFEPNGLSEIPLLGTLEQRPPLEPLALPPRRPSQSVPGAMPPFVVDAQQRS
Ga0187777_110470711	3300017974	Tropical Peatland	FGAIMLALELLWFKTSLAYDSGNSVMWMEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSSRQRKRIDRMCAQHGYVSLLVLNERAEPTILGTLEQRPPIETEILSHPRPSQGMRGAVPPFAADAQQRS
Ga0187782_100588051	3300017975	Tropical Peatland	MWLEKLCWGVLRVLTPLGPRYVKPSFAQRLYLIWIFRNFHTLPAKVLSLRQQKWIDQICATHGFTSLFEPSGLSEVPLVGTLEQRPLLEPLTFSQRRPGSGVPEAMPPFVTDAQQRS
Ga0187804_102868661	3300018006	Freshwater Sediment	ALELLWFKNCYRSLTQVTVAMWLEKLSQGVLRVLTPLGPRYVSPTFFQRLYLLWIFRNFHTLPVKVLSRRQRRRIDRMCTRHGFVPPRELGGFGETPVLGTLEQRPPLEAQSLAPRRPNQSIPGAPFAADVQQRM
Ga0187804_104878191	3300018006	Freshwater Sediment	MLMQTLFAGVLRVLTPLGPRYVNPSFAQRIYLLWIFRNFHTLSVRVLSLRQQRWIEMICAEHGFVSLPDLHAFEETPVLGTLEQRPTETGSLPPRRPSQSVSGAVAPF
Ga0187871_100603273	3300018042	Peatland	MLLDKLTQGVLRVLTPLGPRYVNPSFFQRLYLLWIFRNFHTLPLKVLRPHQQRRIDRMCLKHGFVSLLELNGLAETPVLGTLEQRPPMEASLPPRRANQGVSRAVGTFAADIQQRS
Ga0187772_100011208	3300018085	Tropical Peatland	MWLEKLCWGVLRVLTPLGPRYVKPSFAQRLYLIWIFRNFHTLPAKVLSLRQQKWIDRICATHGFTSLFEPSGLSEVPLVGTLEQRPPLEPLTFSRRRPGSGVPEAMPPFVTDAQQRS
Ga0187772_100316343	3300018085	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVNPSFLQRIYLLWIFRNFHTLPVKVLSARQQKWIDGMCAMHGFVSLMELGGFSETPLLGTLEQRPPMEPQSLSPRRPNQSVPGAMPPFVADAQQRS
Ga0187772_101414232	3300018085	Tropical Peatland	MWLEKLSFGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVRVLSPRQQKRIDSMCARHGFVSLVELNELAEPAILGTLEQRPPLESKSPQPNENVSDVMRPFATDAQQRS
Ga0187772_102012453	3300018085	Tropical Peatland	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSPRQQKRIDGICTQHGFVSLVELHELSEPAILGTLEQRPPLGSESLRRPDQSVSDVMRPFAADTQQRS
Ga0187772_102172743	3300018085	Tropical Peatland	MLMQTLFAGVLRVLTPLGPRYVNPSFVQRIYLLWIFRNFHTLPVRVLSPRQQRWFETICAEHGFVSLPDVHSFEQTPVLGTLEQRPIDVASVSPRRPSQSVPGVPPFAADVQQR
Ga0187772_103819283	3300018085	Tropical Peatland	LEKLSWGMLRVLTPLGPRYVNPSFLQRLYLLWIFRNFHTLPVKVLSARQQKWIDGVFARHGFVSLMELNGFSETPLLGTLEQRPPMEPQSLPSRRPSQSVPGAMPPFVADAQQRS
Ga0187772_112599632	3300018085	Tropical Peatland	VLRVITPLGPRYVNPSFLQRIYLLWIFRNFQTLPVRVLSQRQQRWFEMMCAEHGFVSLPDVHSFEETPVLGTLEQRPMDVGNAPPRRPSQGVPGAVPPFAADVQQR
Ga0187769_100024717	3300018086	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSARQQKWIDSVFARHGFVSLMELNGFSETPLLGTLEQRPPMEPQSLPSRRPSQSVPGAMPPFVADAQQRS
Ga0187769_100123914	3300018086	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVNPSFLQRIYLLWIFRNFHTLPVKVLSARQQKWIDGMCAMHGFVSIMELGGFSETPLLGTLEQRPPMEPQSLSPRRPNQSVPGAMPPFVADAQQRS
Ga0187769_106720561	3300018086	Tropical Peatland	PLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSPRQQKRIDSICTQHGFVSLVELHELSEPAVLGTLEQRPPLGSESLRCPDQSVSDVMRPFAADTQQRS
Ga0187771_100901574	3300018088	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSTRQQKWIDGMCAMHGFVSLVELNGFSETPLLGTLEQRPAMEPQSLPPRRPSVPGAMPPFVADAQQRS
Ga0187771_102500213	3300018088	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSARQQKWIDSVFARHGFVSLMELNGFSETPLLGTLEQRPPMEPQSLPSRRPSQSVPGAMPPFV
Ga0187771_103745571	3300018088	Tropical Peatland	RYVNPSFAQRLYLLWIFRNFHTLPVKVLSTRQQKWIDGMCAMHGFVSLIELNGFSETPLLGTLEQRPAMEPQSLPPRRPSVPGAMPPFVADAQQRS
Ga0187770_101313433	3300018090	Tropical Peatland	MWLEKLCWGVLRVLTPLGPRYVKPSFAQRLYLIWIFRNFHTLPAKVLSLRQQKWIDQICATHGFTSLFEPSGLSEVPLVGTLEQRPPLEPLTFSRRRPGSGVPEAMPPFVTDAQQRS
Ga0187770_101367833	3300018090	Tropical Peatland	MWLEKLSWGVLRVLTPLGPRYVNPSFMQRLYLLWIFRNFHTLPVKVLSARQQKWIDSVFARHGFVSLMELNGFSETPLLGTLEQRPPMEPQSLPSRRPSQSVPGAMPPFVADAQQRS
Ga0187770_108423682	3300018090	Tropical Peatland	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLSPRQQKRIDSICTQHGFVSLVELHELSEPAVLGTLEQRPPLGSESLRRPDQSVSDVMRPFAADTQQRS
Ga0187770_117151601	3300018090	Tropical Peatland	MLMQTLFSGVLRVLTPLGPRYVNPSFTQRIYLLWIFRNFHTLSLRVLSPRQQRWIETVCAEHGFVSLPQVHGFEETPLLGTLEQRPTETGSLPPRRPSESVRGAVPPFAADMQQRS
Ga0210407_100598503	3300020579	Soil	MWLDKLSLGVLRVLTPLGPRYVNPSVLQRLYLVWIFRNFHTLPLKVLRPRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRPSQSVSSAVGTFAADVQQRS
Ga0210407_104358813	3300020579	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRRRQQRRIDRMCLKRGFVSLPERNGLEETPVLGTLEQRPPMEASLPPRRASQSVSRAV
Ga0210407_108917951	3300020579	Soil	MWLDKVSRGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRSSQGVASAVGTFAADIQQRS
Ga0210403_100205702	3300020580	Soil	MWLDKLSRGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLQETPVLGTLEQRPPMETGLQPRRPSHGVSSAVGTFAADIQQRS
Ga0210403_108241191	3300020580	Soil	MLLDKLSHGVLRVLTPLGPRYVNPSLFQRLYLLWIFRNFHTLPLKVLRPRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMESGLPPRRPSHGVAGAVGSFAADVQPRS
Ga0210395_100354063	3300020582	Soil	MWLDKLSRGVLRVITPLGPRYVNPSLFQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLPESNGLEETPVLGTLEQRPPMETGLQPRQPSHGVSSAVGTFAADIQQRS
Ga0210401_101256324	3300020583	Soil	MLLDKLCQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQQRKIDRMCLKHGFVSLLELNGLSETPVLGTLEQRPPMESGLPPRRPAQSIPRAVGTFVADIQQRS
Ga0210401_106406261	3300020583	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRPRQQKKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPHRPSHDVSSAVGTFAADIRQRS
Ga0210406_1000056442	3300021168	Soil	MLLDKLSRGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLRHGFVSLPERNGLEETPVLGTLEQRPPMETSLPPRRAGQSVSGAVATFAADIQQRS
Ga0210405_100090999	3300021171	Soil	VLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRSSQGVASAVGTFAADIQQRS
Ga0210383_116934422	3300021407	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRSSQGVASAVGTFAADIQQRS
Ga0210394_100003865	3300021420	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRRRQQRRIDRMCLKRGFVSLPERNGLEETPVLGTLEQRPPMETSLPPRRASQGVSQAVGRFAADIRQRS
Ga0210394_117970801	3300021420	Soil	MWLDKLSQGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLPRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETALPPRRASQSVSQAVGTFAADIRQRS
Ga0210391_101182773	3300021433	Soil	MWLDKLSRGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRPSQGVASAVGTFAADIQQRS
Ga0210409_113955131	3300021559	Soil	MWLDKVSRGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRSS
Ga0242671_11173071	3300022714	Soil	QELSMWLDKLSRGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLRRRQQRKIDRMCLKHGFVSLLELNGLQETPVLGTLEQRPPMETGLQPRRPSHGVSSAVGTFAADIQQRS
Ga0208043_11101842	3300027570	Peatlands Soil	MLMQTLFAGVLRVLTPLGPRYVNPSFVQRIYLLWIFRNFHTLSVRVLSLRQQRWIEMICAEHGFVSLPDLHAFEETPVLGTLEQRPTETGSLPPRRPSQSVSGAVTFAADMQQRS
Ga0209248_101877051	3300027729	Bog Forest Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQRRKIDRMCLKHGFVSLQELNGLAETPVLGTLEQRPPMETGLPPRRPSQSVPEAVGIFAADIRQRS
Ga0209773_103035201	3300027829	Bog Forest Soil	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLTPRQQKRIDNICARHGFVSLPAVNDLAEPAILGTLEQRPSIESRDLSQRKPNQSVSDAMRPFATDVQQRS
Ga0209517_100580233	3300027854	Peatlands Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQQRKIDRMCLRHGFVSLLELNGLAETPVLGTLEQRPPMETGLPLRRPSHSVSRAVGTFAADIQQRS
Ga0209169_100073416	3300027879	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPYQQRRIDRMCLKHGFVSLLELSGLAETPVLGTLEQRPPMETSLPPRRPSQSVVRAVGTFAADIQQRS
Ga0209169_101339953	3300027879	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQRRKIDRMCLKHGFVSLPELNGLAETPVLGTLEQRPPMENGLPPRRPSQSIPEAVGIFAADIRQRS
Ga0209380_105424871	3300027889	Soil	MWLDKLSQGVLRVLTPLGPRYVNPSVLQRLYLLWIFRNFHTLPLKVLPRRQQRKIDRMCLKHGFVSLLDLNGLEETPVLGTLEQRPPMETALPPRRASQSVSQAVGTFAADIRQRS
Ga0209006_102374872	3300027908	Forest Soil	MLLDKLARGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPLKVLPRRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGSPARRPSHGVSGAVGTFAADVRQRS
Ga0316363_100015857	3300030659	Peatlands Soil	MQTLFAGVLRVLTPLGPRYVNPSFVQRIYLLWIFRNFHTLSVRVLSLRQQRWIEMICAEHGFVSLPDLHAFEETPVLGTLEQRPTETGSLPPRRPSQSVSGAVTFAADMQQRS
Ga0307469_100119071	3300031720	Hardwood Forest Soil	MLLDKLSQGVLRVLTPLGPRYVNPSVVQRLYLLWIFRNFHTLPLKVLRPHQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGFPPHRPSQSVSQAVGTFAADVQQRS
Ga0307471_1015214901	3300032180	Hardwood Forest Soil	MWLDKLSLGVLRVLTPLGPRYVNPSVLQRLYLVWIFRNFHTLPLKVLRPRQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMETGLPPRRPSQGVSSAVGTFAADVQQRS
Ga0335085_101346083	3300032770	Soil	VLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPIKVLRPHQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMEASLPPRRPSQSVARAVGSFAADIRQRY
Ga0335085_107219822	3300032770	Soil	MLLDKLSQGVLRVLTPLGPRYVSPSLLQRLYLLWIFRNFHTLPLKVLSLRQRRWIDRMCMSHGFVALLELNTLGDIPVLGTLEQRPPSEGEPIPPRRPPHGVTNTVPFATDMQQES
Ga0335082_100525464	3300032782	Soil	MLLDKLSQGVLRVLTPLGPRYVSPSFFQRLYLLWIFRNFHTLPVKVLSLRQRRWVDRMCGLQGFVSLLELNGFADLPVLGTLEQRPVMESGSLPPRRPSQGVTSAVPFAADAQQRF
Ga0335082_100848185	3300032782	Soil	MLLDKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPIKVLRPHQQRKIDRMCLKHGFVSLLELNGLEETPVLGTLEQRPPMEASLPPRRPSQSVARAVGSFAADIRQRY
Ga0335082_100885853	3300032782	Soil	MWLEKLSLGVLRVLTPLGPRYVNPSLVQRLYLLWIFRNFHTLPVKVLSLRQQKRIDAMCAKYGFVSLLELHGLGDIPVLGTLEQRPPREPQSLPPRRPSQGAVPPFVADLQQRS
Ga0335082_108174792	3300032782	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPAKVLSLRQRRWIDRMCAVQGFVALMELNGFGDIPILGTLEQRPVVEPESLPPRRPSQSVTSSVPFAADAQQRS
Ga0335079_100555425	3300032783	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPLKVLRPHQQRRIDRMCLKHGFVSLLELSGLAETPVLGTLEQRPPMETGLPPRRPSQSVSRAVGTFAADIQQRS
Ga0335079_100935962	3300032783	Soil	MLLDKLSLGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPAKVLSAGQRRRIERMCRVHGFVSLLELNGFGDIPVLGTLEQRPPVESESLPPRRPSRGVTVPFATDMQQGS
Ga0335079_101828741	3300032783	Soil	MWLEKLSFGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPAKVLSPRQQRRIDRICAQHGFVSLLELHELAILGTLEQRPPLESESLPPRRPSQSVSSVMGHFAGDTQQGS
Ga0335079_115083151	3300032783	Soil	YVSPSLIQRLYLLWIFRNFHTLPLKVLSLRQRRWIDHMCMSHGFVALHDLNSLGDIPVLGTLEQRPPSEGEPIPPRRPTHGVTNTVPFATDMQQGS
Ga0335078_100141108	3300032805	Soil	MWLEKLSLGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPVKVLTPRQQKRIDNICARHGFVALPAVNALAEPAILGTLEQRPSIESRDVVQRKPNQNVSDAMRPFAADAQQRT
Ga0335078_100174677	3300032805	Soil	MWLEKLSVGVLRVRTPLGPRYVNPSLTQRLYLLWIFRNFPTLPVRVLSQGQQKRIDRICAQHGFVSLVELNEFGPPAILGTLEQRPPLESNRQSSREPGQNVSDVMRPFATDVQPPS
Ga0335078_100430565	3300032805	Soil	MLALELLWFKATEKTNIKVTFTMWLEKLSFGVLRVRTPLGPRYVNPSFLQRLYLLWIFRNFQTLPVKVLSPAQQKRIDRICAQHGFVSLLELNELAAPAILGTLEQRPPIESKSPSREPGQNVSEVMRPFATDIQPRS
Ga0335078_109955442	3300032805	Soil	MEKLSFGVLRVLTPLGPRYVNPSFLQRLYLLWIFRNFDTLPVKVLSSRQRRRIDTLCAQHGFVSMLELANSGEIPVLGTLEQRPALDSGSQPPRRPSQSVTETVAPFAADARRGS
Ga0335070_101276233	3300032829	Soil	MLLDKLSQGVLRVLTPLGPRYVSPSLLQRLYLLWIFRNFHTLPLKVLSPRQRRWIDRMCMSHGFVSMLELNSFGDILVLGTLEQRPPAEGEPLPPRRPSHGVTNPVPFATDMQQGS
Ga0335070_117651712	3300032829	Soil	MWLEKLSQGVLRVLTPLGPRYVSPTFVQRLYLLWIFRNFHTLPVKVLSTGQRRRIDRMCLRHGFVPPRELGGILETPVLGTLEQRPPIEAQSLPPRRSAQSVSAAPFAADAQQRT
Ga0335081_1000334724	3300032892	Soil	MLLDKLSLGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPAKVLSAGQRRRIERMCRVHGFVSLLELNGFGDIPVLGTLEQRPPVESESLPPRRPSRSVTVPFATDMQQGS
Ga0335081_101637763	3300032892	Soil	MWLEKLSVGVLRVRTPLGPRYVNPSLAQRLYLLWIFRNFPTLPVRVLSQGQQKRIDRICAQHGFVSLVELNEFGPPAILGTLEQRPPLESNRQSSREPGQNVSDVMRPFATDVQPPS
Ga0335081_102609383	3300032892	Soil	MWLERLSWGVLRVLTPLGPRYVKPTLVQRVYLLWIFRNFPTLPSKVLSLRQQKWIDGICAQHGFVSLLEPNGVVDTPLLGTLEQRPALEPLALPPRRSPQSAPSAIPPLVADAQQRS
Ga0335072_102293494	3300032898	Soil	MLLDKLSLGVLRVLTPLGPRYVNPTLVQRLYLLWIFRNFHTLPLTVLRPAQRKRIDRMCRRHGFVSLFELSAHDDRPVLGTLEQRPPMEAGLPPRRPSQGVSGAVGSFAADLRQRS
Ga0335084_1000111613	3300033004	Soil	MLLDKLSQGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPAKVLSLRQRRWIDRMCAVQGFVALMELNGFGDIPILGTLEQRPVMEPESLPPRRPSQSVTGSVPFAADAQQRS
Ga0335077_105018692	3300033158	Soil	MWMEKLFFGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFQTLPIKVLSLRQQRRIDRICAQHGFVAVLELHELDILGTLEQRPPLESESLPSRRPNQGVSSVMGHFAGDAQQGS
Ga0314862_0160656_19_426	3300033803	Peatland	MLALELLWLRSKKTHGKVMFTMWLEKLSFGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPAKVLSPRQQRRIDHICAEHGFVSLLELHELAILGTLEQRLPRESESLPPRQPNQSVSSVMGHFAGDAQQGS
Ga0314864_0120260_202_546	3300033805	Peatland	MWLEKLSFGVLRVLTPLGPRYVNPSFVQRLYLLWIFRNFHTLPAKVLSPRQQRRIDHICAEHGFVSLLELHELAILGTLEQRLPRESESLPPRQPNQSVSSVMGHFAGDAQQGS
Ga0314866_013003_431_784	3300033807	Peatland	MFTMWLEKLSFGVLRVLTPLGPRYVNPSLLQRLYLLWIFRNFHTLPAKVLSPRQQRRIDHICAEHGFVSLLELHELALLGTLEQRPPLESESLPPRRPSQSVSSVMGHFAGDTQQGS
Ga0314867_005734_432_785	3300033808	Peatland	MFTMWLEKLSFGVLRVLTPLGPRYVNPSLVQRLYLLWIFRNFHTLPAKVLSPRQQRRIDHICAEHGFVSLLELHELALLGTLEQRPPLESESLPPRRPSQSVSSVMGHFAGDTQQGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097736

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences