Metagenome Family F097737

Basic Information
Family ID	F097737
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	52 residues
Representative Sequence	VSSANRKPGIHVAWTTVTYRSVALLILAGAAVFFIAMRVAFPQFTQNGVQ
Number of Associated Samples	98
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.96 %
% of genes from short scaffolds (< 2000 bps)	0.96 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (29.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.269 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.74% β-sheet: 2.56% Coil/Unstructured: 57.69%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13231	PMT_2	12.50
PF00171	Aldedh	10.58
PF01588	tRNA_bind	3.85
PF00857	Isochorismatase	3.85
PF08924	DUF1906	1.92
PF12623	Hen1_L	0.96
PF01432	Peptidase_M3	0.96
PF13442	Cytochrome_CBB3	0.96
PF08264	Anticodon_1	0.96
PF03713	DUF305	0.96
PF02922	CBM_48	0.96
PF01850	PIN	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	10.58
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	10.58
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	10.58
COG0073	tRNA-binding EMAP/Myf domain	Translation, ribosomal structure and biogenesis [J]	3.85
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	3.85
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.85
COG2517	Predicted RNA-binding protein, contains C-terminal EMAP domain	General function prediction only [R]	3.85
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.96
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300027895\|Ga0209624_10723877	Not Available	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.23%
Host-Associated	Host-Associated	5.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.85%
Aquatic	Environmental → Aquatic	15.38%
Plants	Host-Associated → Plants	5.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.27%
Freshwater	Environmental → Aquatic → Freshwater	11.54%
Peat	Environmental → Terrestrial → Peat	9.62%
Roots	Host-Associated → Plants → Roots	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.92%
Sediment	Environmental → Aquatic → Sediment	1.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Loam	Environmental → Terrestrial → Soil → Loam	19.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.96%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024220	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026724	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN410 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_00576970	2189573001	Grass Soil	VSSDNRKPGIHVAWTTVTYRSLAVLIIGVAAAFFLSMRLAFPQFTDTSVKKASDVAGK
JGI12270J11330_102068181	3300000567	Peatlands Soil	VRFFGSKVSADNRKPGIHIAWTTVTYRSVALMIVAGAAIFFFAVRMTFPQFTESGIKKVDDVA
C688J13580_10357291	3300001205	Soil	VSSDNRKPGIHVAWTTVTYRSLALLIIAVGAGFFVSMRLVFPQFTQSSVKKAGDVTSKLL
JGI12712J15308_100137382	3300001471	Forest Soil	VGLTGSFVKVSSPIRKPGIHVRWKQVTYRSVALLVLAGAAIFLVAMHLVFPQFTD
JGI12635J15846_101669942	3300001593	Forest Soil	VSSPNRKPGIHVAWTTVTYRSVALMVLAGGVVLLLGMRFTFPQFTEN
C688J18823_106239941	3300001686	Soil	VSSNNRKPGIHVAWTTITYRSVALLILATAAIAFIALRFTFPQFTQNTLQKAGDVT
Ga0062385_104288211	3300004080	Bog Forest Soil	VSSVNRKPGIHVAWTTITYRSVALIVVGVAALFFVAARVAFPQFTESGIK
Ga0062387_1008979772	3300004091	Bog Forest Soil	VASDNRKPGIHVAWTTVTYRSVILLILAALAIVFGAMRVAFPQFTQN
Ga0063455_1000668671	3300004153	Soil	VSSDNRKPGIHVAWTTVTYRSLALLIIAVGAGFFVSMRLVFPQFTQSSVKKAGDVTSKL
Ga0066678_103656282	3300005181	Soil	VSSDNRKPGIHIKWKTVTYRSVALLILAGALILFVGMRIAFPQFTQASIQAADNVANKI
Ga0070711_1005030041	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSSANRKPGIHVAWTTVTYRSVILLILAVAAVFFIAMRVAFPQFTQNSLKAADNV
Ga0070761_102609072	3300005591	Soil	VSSDNRKSGIHVAWTTITYRSVVLLCLAVVAILFIAVRVAFPQFTQNSVQAGE
Ga0070762_102848301	3300005602	Soil	VSSSTRKPGIHIAWKTVTYRSVALLIVAGAAIFFVAVRFTFPQFTESGIKA
Ga0070763_102584072	3300005610	Soil	VSSDNRKSGIHVAWTTITYRSVVLLVLAVIAILFVAMRFAFPQFTQNSVKA
Ga0070717_104102111	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSSNSRKTGVHIAWTTITYRSVALLVLAVCAIFFVAMRLAFPQFT
Ga0075017_1009025842	3300006059	Watersheds	VSTDSRKPGIHIAWTAVSYRSVALMIMGVAALFFAAMWFTFPQFTQTGLKKSEDLAGKLLEKVAGIA
Ga0075019_108724601	3300006086	Watersheds	VLVSSTTSKPGLHIAWKTVTYRSVALLILAVVVVLLVAVRVSFPQFSEHAIQAADK
Ga0070765_1001394432	3300006176	Soil	VSSDDRKPGLHVAWTTVSYRSVALLIIAGAGIFFGAMWFTFPQFTQSSLKKADDVFSK
Ga0097621_1008454042	3300006237	Miscanthus Rhizosphere	VSSDNRKSGIHVAWTTITYRSVALLILAGLAIFGVAVRFTFPQ
Ga0073928_103736961	3300006893	Iron-Sulfur Acid Spring	VSSPNRKSGIHVAWTTVTYRSVVLMVLAALAVFFMVLHAVFPQFT
Ga0116105_12517251	3300009624	Peatland	VSSSTRKPGIHIAWKTVTYRSVALLIVGGAVVLFIGVRLTFPQFT
Ga0116129_10617712	3300009633	Peatland	VHVSSQTRKPGVHIAWKTVTYRSVALMILSGVVICLLGMRLAFPQFTE
Ga0116215_13061441	3300009672	Peatlands Soil	VSADNRKPGIHIAWTTVTYRSVALMIVAGAAIFFFAVRMTFPQFTESGIKKVDDVAGRLLEKV
Ga0116217_107203762	3300009700	Peatlands Soil	VSSSTRKPGIHIAWTTVTYRSVALMILAGALLFLLAMKVAFPQ
Ga0116219_100808361	3300009824	Peatlands Soil	VSSDNRKPGIHVAWTTITYRSVALLVIAVAVVFFIAMRVAFPQFTENSVKA
Ga0116223_109084441	3300009839	Peatlands Soil	VSSPTRKPGIHIAWKTVTYRSVALLIIGGFAVVLIGIRLTFP
Ga0126373_103214203	3300010048	Tropical Forest Soil	VSSDDRKPGIHIAWTTVTYRSVALLIFAVAAAFFIAMHFAFPQ
Ga0126378_103730811	3300010361	Tropical Forest Soil	VSSDDRKPGIHIAWTTVTYRSVALLIFAVAAAFFIAMHFAFPQFTDNS
Ga0126379_134738622	3300010366	Tropical Forest Soil	VSSDNRKPGIHVAWTTVTYRSLVLLTLAVVAALFIALRFTFPQFTENTVK
Ga0137386_106867791	3300012351	Vadose Zone Soil	VSSDNRKSGIHVAWTTITYRSVALLILAGVAIFGVVVRFTFPQFTDNSIKAGEN
Ga0137404_111675032	3300012929	Vadose Zone Soil	VSSDNRKPGIHVAWTTVTYRSVALLILAVAAVLFIGMRVAFPQFTQNGVHAVNNVAGKLLEKVA
Ga0126369_119771661	3300012971	Tropical Forest Soil	VSSDDRKPGIHIAWTTVTYRSVALLIFAVAAAFFIAMHFAFPQFTDNSI
Ga0157378_130625931	3300013297	Miscanthus Rhizosphere	VSSDNRKPGIHVAWTTITYRSVALLILAGLAIFGVAVRFTFP
Ga0181531_102988502	3300014169	Bog	VSSDNRKSGIHVAWTTITYRSVVLLVLAVIAILFIAMRMAFPQFTQNSVK
Ga0163163_105855751	3300014325	Switchgrass Rhizosphere	VSPNRKPGIHVEWTSVTYRSVLLAVVGVAALFSLGMRLAFPQFTETTVKAAS
Ga0182016_106585301	3300014493	Bog	VSSSTRKPGIHIAWKTVTYRSVALLIVGGAAVLFIGVRLTFPQFTESSIKAASG
Ga0182032_119543222	3300016357	Soil	VASNNRKPGIHVAWTTITYRSVALLILAVAAIAFISIRFAFPQFTQN
Ga0182039_105413771	3300016422	Soil	MHIAWTTITYRSVALIILAVGAIFFVAMRIAFPQFTQASLQKAGDVTSKVLEKVA
Ga0187817_111381051	3300017955	Freshwater Sediment	VSSNDRKPGIHVAWTTVTYRSVALLILAVLAVFFFAMHAAFPQFTDNSLKSAGSVANKLL
Ga0187778_105486371	3300017961	Tropical Peatland	VSSPNRKPGFHIAWTTVTYRSVALLILAGVAIFYIFMRATFPQFTENSLKKADDAAGRLLEHVAG
Ga0187780_104724412	3300017973	Tropical Peatland	VAPENRKPGFHIAWTTITYRSVVLLILAVAGGFFLFMRATFPQFTQNTLQKADDVASK
Ga0187780_109933271	3300017973	Tropical Peatland	VSSDNRKPGIHIAWTTVTYRSVALLILAVVAVFFIAMRAAFPQFTQNTLQKAGDVTSKVLEK
Ga0187782_110204092	3300017975	Tropical Peatland	VSSANRKPGIHIAWTTVTYRSVALLILAGFAVCFIAMRMAFPQFTENGLKKANDVAGKLLEKV
Ga0187805_106490471	3300018007	Freshwater Sediment	VSSDNRKPGIHVAWTTVTYRSVALLIVGVAVVFFAAVRVTFPQFTQSSMKKANDVA
Ga0187769_112867252	3300018086	Tropical Peatland	VSSANRKPGIHIAWTTVTYRSVVLLALTVVGFLFLAVRVTFPQFTAN
Ga0187770_117961882	3300018090	Tropical Peatland	VSANRKPGIHIAWKTVTYRSVLLTVLAGVLLFSIGIRLTFPQFTENSIKAAD
Ga0210407_100304231	3300020579	Soil	VSSSTRKPGIHIAWTTVTYRSVALMILAGLIVFLVGMRFTFPQFTENSI
Ga0210403_111755841	3300020580	Soil	VALVSPNRKPGIHIAWKTVTYRSVMLLVLLGLVVFFLGVRLTFPQFTDNGLKAVNGL
Ga0210399_110384721	3300020581	Soil	VSSANRKPGIHVAWTTVTYRSVALLIMAVAAVFFIAMRVAFPQFTQNGVQAVNNV
Ga0210408_108604411	3300021178	Soil	VSSDNRKPGLHVAWTTVTYRSVALMILGVAVVFSIGMRVAFPQFTESSVKSASNVASK
Ga0210385_113154872	3300021402	Soil	VSSANRKPGIHVAWTTVTYRSVALLILAGAAILFAAMRVAFPQFTQSGVKAANNIA
Ga0210389_113537802	3300021404	Soil	VSSDNRKPGIHVAWKTVTYRSVALAILAIAALIFLGLRVAFPQFTQSTVKAAGDVAGKLL
Ga0210383_100694271	3300021407	Soil	VSSQTRKPGIHIAWKTVTYRSVALLILAGAAVCFVAMRLTFPQFTENSVKAVGSVANK
Ga0210394_101886481	3300021420	Soil	VSSPTRKPGIHVAWTTVTYRSVALMVLAGAVVLLLGMRFTFP
Ga0210394_107174982	3300021420	Soil	VPSDNRKSGIHVAWTTITYRSVALLIMAGAVIFYFVVRFTFPQF
Ga0210384_111732971	3300021432	Soil	VSSANRKPGIHVAWTTVTYRSVALLILAGAAVFFIAMRVAFPQFTQNGVQ
Ga0210392_111040101	3300021475	Soil	VSSPTRKPGIHIAWKTVTYRSVALLIVAGAAVVLIGIRL
Ga0210410_107489001	3300021479	Soil	VSSSTRKPGIHVAWKTVTYRSVALLILAGAVVFFVAVRFTFPQFTDSGIKAASGFASRAL
Ga0210409_115174421	3300021559	Soil	VSSPIRKPGIHIAWTTVTYRSVALLIVAGAAVFFIAVRFTFPQFTEN
Ga0126371_129374961	3300021560	Tropical Forest Soil	VASNNRKPGIHIAWTTITYRSVVLMILAVAAIAFLSMRFAFPQF
Ga0212123_103646102	3300022557	Iron-Sulfur Acid Spring	VSSNRKSGIHVAWTTVTYRSVALLVLAGFAIFLIAMRVAFPQFTQNTLKAGENAGS
Ga0224568_10245152	3300024220	Plant Litter	VSSDDRKSGIHVAWTTITYRSVVLLILAAVAILFISIRLVFPQFTQNS
Ga0228598_10055502	3300024227	Rhizosphere	VSSPTRKPGIHIAWKTVTYRSVALLIVAGAVVFLIAIRLTFPQFTENSIK
Ga0208819_10449482	3300025498	Peatland	VSSSTRKPGIHIAWTTVTYRSVALMILAGVMLCLLGMRLAF
Ga0207693_112570912	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VSSANRKPGIHVAWTTVTYRSVILLILAVAAVFFIAMRVAFPQFTQNSLKAADNVAGKLLERV
Ga0209152_102989832	3300026325	Soil	VSSDNRKPGIHIKWKTVTYRSVALLILAGALILFVGMRIAFPQFTQASI
Ga0208842_1024641	3300026724	Soil	VSSNNRKPGIHVAWTTVTYRSIALLVLAVAAVCFIAMRMAFPQFTEAGIKKAD
Ga0209222_10962651	3300027559	Forest Soil	VSSQTRKPGIHVAWTTVTYRSVALMILAGAAIFFGAMKIAFPQFTDNSIKAANGVA
Ga0209733_11427781	3300027591	Forest Soil	VSSDNRKPGIHVAWTTVTYRSVVLMVMAGVAVFFIFLRVTFPQFTENSVKAGENAA
Ga0209248_100778912	3300027729	Bog Forest Soil	VSSQTRKPGYHIAWKTVTYRSVALLILAGAAIFFVALRLTFPQFTENSIKAASGVADK
Ga0209038_100843841	3300027737	Bog Forest Soil	VSSSTRKPGIHVAWKTVTYRSVALLIVAGAAVFFVAVRFTFPQFTESGI
Ga0209908_102163761	3300027745	Thawing Permafrost	VSSQTRKPGIHIAWTTVTYRSVALMILAGAAVFLAAVRFTFPQ
Ga0209655_100158283	3300027767	Bog Forest Soil	VSSQTRKPGIHIAWRTVTYRSVALMILAGALLCLLGMRLAFPQFTESGIQAAD
Ga0209656_104735522	3300027812	Bog Forest Soil	VSSDNRKPGIHIAWTTITYRSVILLILAVGAVLFIAMRVAFPQFTQNQVKAGAN
Ga0209060_105449982	3300027826	Surface Soil	VSSANRKPGIHVAWTTVTYRSMALLILAVAAVFFIAVRATFPQFTANSIKKADDVAGKLLER
Ga0209580_100377931	3300027842	Surface Soil	VSSNSRKTGVHIAWTTITYRSVALLVLAVCAIFFIAMRVAFPQFTQNTLQKADDVASR
Ga0209693_100484052	3300027855	Soil	VSSDNRKSGIHVAWTTITYRSVVLLVLAVIAILFVAMRFAFPQFTQNSVKAGENLAG
Ga0209590_109427521	3300027882	Vadose Zone Soil	VSSDNRKPGIHIKWKTVTYRSVALLILAGALILFVGMRIAFPQFTQAGIRAADNVANKIL
Ga0209275_105163911	3300027884	Soil	VSSSTRKPGIHVAWKTVTYRSVALLILAGAAVFFIALRFTFP
Ga0209275_105890162	3300027884	Soil	VSSNDRKPGIHVAWTTVTYRSVALLILAGLAVFFIAVRAAFPQFTDNSLKS
Ga0209624_102158241	3300027895	Forest Soil	VSSPTRKPGIHVAWTTVTYRSVALMVLAGAVVLLLGMRFTFPQFTEN
Ga0209624_107238772	3300027895	Forest Soil	VSSVNRKPGIHVAWTTVTYRSVALIVIAVAVLFFLAARMAFPQFTENGIKK
Ga0265354_10118911	3300028016	Rhizosphere	VSSSTRKPGIHVAWKTVTYRSVALLIVAGAAVFFVAMRFTFPQF
Ga0302218_101590042	3300028863	Palsa	VSSPTRKPGIHIAWTTVTYRSVALMIIAGLAVVLTGIRLTFPQFTENTIKA
Ga0302218_102449531	3300028863	Palsa	VSSDDRKSGIHVAWTTITYRSVVLLVLAAVAILFIAIRLVFPQFTQNSVKAGENLAGRLL
Ga0302278_102371221	3300028866	Bog	VSSQTRKPGIHIAWKAVTYRSVALLIVAGAAIFFVAIRLTFPQF
Ga0311329_109721411	3300029907	Bog	VSSPTRKPGIHIAWTTVTYRSVALLIIAGLAVVLTGIRLTFPQFTESTIKAAGGVA
Ga0311358_108923921	3300029915	Bog	VSSSTRKPGIHIAWKTVTYRSVALLIVGGAAVLFIGVRLTF
Ga0302277_11300803	3300029982	Bog	VSSQTRKPTVHIAWKAVTYRSVALLIVIVAAISTLGMRLAFPQFTAS
Ga0311339_113525711	3300029999	Palsa	VATTTRKPGIHVAWKTVTYRSVALLILAGAVVFFIALRVAFPTFTQSGIDAADHAAGKV
Ga0311338_118235061	3300030007	Palsa	VSSQTRKPGIHIAWKTVTYRSVALMIVAGAAVLLVGVRLTFPQFTENS
Ga0302177_105350981	3300030053	Palsa	VSSVNRKPGIHVAWTTVTYRSVALLILAGAAILFVAMRVAFPQFTQNSVKAANNV
Ga0302182_102958741	3300030054	Palsa	VSSAIRKPGIHVRWKTVTYRSVALIVLAALALLFLGMRMAFPQFTDNGVKAAGNVAG
Ga0310686_1005697291	3300031708	Soil	VSSSTRKPGIHVAWKTVTYRSVALLILAGAVVFFVAVRFTFPQFTES
Ga0310686_1070741671	3300031708	Soil	MFFVHVSSSTRKPGINIAWTTVTYRSVAMMILAGVLLLLLAMRFTFPQFTENGIKAAD
Ga0307476_102606251	3300031715	Hardwood Forest Soil	VSSANRKPGIHIRWKTVTYRSVALLILGGALLFFVGLRLAFPQFTQSGIQAADNA
Ga0307474_105720362	3300031718	Hardwood Forest Soil	VSSSTRKPGIHIAWKTVTYRSVALLIVAGAAIFFVAVRFTFPQFTESSLKAAASLA
Ga0307475_110250802	3300031754	Hardwood Forest Soil	VSSANRKSGIHVAWTTITYRSVALLILAAAAIFFVVLRFAFPQFTDNSLKAGENVASKVLERI
Ga0307471_1011452551	3300032180	Hardwood Forest Soil	VSSPIRKPGIHLAWTTVTYRSVALLIVAGAVVFLIAIRLTFPQFT
Ga0335079_122526771	3300032783	Soil	VSAENKPGIHVAWKTVTYRSVILTIVGGLVLFSVGLHFAFPQATEK
Ga0335078_117393701	3300032805	Soil	VSSDNRKPGIHIAWTTVTYRSVALLILAVCAILFIAMRAVFPQFTQNSIQKVDD
Ga0335070_105984422	3300032829	Soil	VSSDDRKPGIHIAWTTVTYRSVLLMIVGVALIFFIAMRAAFPQFTQNTIQKVDGVASRV
Ga0335074_106102391	3300032895	Soil	VSSANRKPGVHIAWTTVTYRSVVSLILAVVAIIFIAMRAAFPQFTQAGLNKADDVASSLL
Ga0316212_10421311	3300033547	Roots	VSSDDRKPGIHVAWTTITYRSVFLLILAGAAILFIAMRAVFPQFTQNTVKAS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097737

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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