Metagenome / Metatranscriptome Family F097746

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097746
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	84 residues
Representative Sequence	MADEGEEILVEHQSTAGKWILIILAIAFVAASVYGYVTTQQHVDKLTKDLSDSQAQVAELKNRMQTAEASEDALAHQVGLTKK
Number of Associated Samples	88
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.04 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.192 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.115 % of family members)
Environment Ontology (ENVO)	Unclassified (33.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.17% β-sheet: 0.00% Coil/Unstructured: 28.83%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01266	DAO	28.85
PF13414	TPR_11	1.92
PF14559	TPR_19	1.92
PF13502	AsmA_2	0.96
PF16363	GDP_Man_Dehyd	0.96
PF05532	CsbD	0.96
PF13432	TPR_16	0.96
PF13429	TPR_15	0.96
PF13371	TPR_9	0.96
PF13520	AA_permease_2	0.96
PF00515	TPR_1	0.96
PF01546	Peptidase_M20	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.62 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.19 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.19 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.19 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.19 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101382762	Not Available	597	Open in IMG/M
3300002954\|JGI20281J44786_102782	Not Available	507	Open in IMG/M
3300003219\|JGI26341J46601_10067820	All Organisms → cellular organisms → Bacteria → Acidobacteria	1085	Open in IMG/M
3300003219\|JGI26341J46601_10213597	Not Available	521	Open in IMG/M
3300004080\|Ga0062385_10967440	All Organisms → cellular organisms → Bacteria → Acidobacteria	569	Open in IMG/M
3300004082\|Ga0062384_100010441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3552	Open in IMG/M
3300004092\|Ga0062389_104715206	Not Available	513	Open in IMG/M
3300004152\|Ga0062386_100471940	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300004152\|Ga0062386_100853790	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300004635\|Ga0062388_101291358	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300006176\|Ga0070765_100047122	All Organisms → cellular organisms → Bacteria → Acidobacteria	3493	Open in IMG/M
3300009520\|Ga0116214_1261893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300009523\|Ga0116221_1391456	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300009524\|Ga0116225_1061451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1787	Open in IMG/M
3300009525\|Ga0116220_10348281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300009698\|Ga0116216_10311029	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300009839\|Ga0116223_10884961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300010339\|Ga0074046_10341320	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300010341\|Ga0074045_10041517	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300010341\|Ga0074045_10349523	All Organisms → cellular organisms → Bacteria → Acidobacteria	964	Open in IMG/M
3300012096\|Ga0137389_11826050	Not Available	504	Open in IMG/M
3300012202\|Ga0137363_10207217	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300012202\|Ga0137363_11252826	Not Available	629	Open in IMG/M
3300012363\|Ga0137390_11783542	Not Available	547	Open in IMG/M
3300014169\|Ga0181531_10208151	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300014495\|Ga0182015_10127050	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300017822\|Ga0187802_10160224	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300017935\|Ga0187848_10484771	Not Available	506	Open in IMG/M
3300017940\|Ga0187853_10174583	All Organisms → cellular organisms → Bacteria → Acidobacteria	1018	Open in IMG/M
3300018017\|Ga0187872_10500821	Not Available	504	Open in IMG/M
3300018034\|Ga0187863_10610122	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300018047\|Ga0187859_10447161	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300020582\|Ga0210395_10620721	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300020582\|Ga0210395_10866618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300020583\|Ga0210401_10355236	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300021170\|Ga0210400_10022314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4931	Open in IMG/M
3300021170\|Ga0210400_10066268	All Organisms → cellular organisms → Bacteria → Acidobacteria	2821	Open in IMG/M
3300021170\|Ga0210400_10644990	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300021180\|Ga0210396_10524608	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300021401\|Ga0210393_11288196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300021402\|Ga0210385_11403998	Not Available	534	Open in IMG/M
3300021405\|Ga0210387_10598918	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300021406\|Ga0210386_11082308	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300021407\|Ga0210383_10213557	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300021420\|Ga0210394_10384058	Not Available	1235	Open in IMG/M
3300021420\|Ga0210394_10607674	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300021420\|Ga0210394_11671644	Not Available	534	Open in IMG/M
3300021432\|Ga0210384_10948335	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300021433\|Ga0210391_10123513	All Organisms → cellular organisms → Bacteria → Acidobacteria	2037	Open in IMG/M
3300021433\|Ga0210391_10509866	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300021433\|Ga0210391_11106323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300021475\|Ga0210392_11092166	Not Available	598	Open in IMG/M
3300021477\|Ga0210398_11084252	Not Available	636	Open in IMG/M
3300021479\|Ga0210410_11227664	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300022521\|Ga0224541_1002475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1891	Open in IMG/M
3300022557\|Ga0212123_10684328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300022734\|Ga0224571_110917	Not Available	631	Open in IMG/M
3300023012\|Ga0228597_100765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300023012\|Ga0228597_109283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300023030\|Ga0224561_1005698	Not Available	904	Open in IMG/M
3300024330\|Ga0137417_1377339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4126	Open in IMG/M
3300025320\|Ga0209171_10493703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300027297\|Ga0208241_1035666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300027439\|Ga0209332_1105972	Not Available	502	Open in IMG/M
3300027625\|Ga0208044_1210554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027629\|Ga0209422_1083200	Not Available	748	Open in IMG/M
3300027648\|Ga0209420_1139639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300027652\|Ga0209007_1153298	Not Available	572	Open in IMG/M
3300027676\|Ga0209333_1090254	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300027803\|Ga0209910_10008910	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300027812\|Ga0209656_10112028	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300027824\|Ga0209040_10053371	All Organisms → cellular organisms → Bacteria → Acidobacteria	2426	Open in IMG/M
3300027824\|Ga0209040_10249389	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300027824\|Ga0209040_10442553	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300027855\|Ga0209693_10536505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300027879\|Ga0209169_10484623	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300027895\|Ga0209624_11057827	Not Available	524	Open in IMG/M
3300027905\|Ga0209415_11131680	Not Available	506	Open in IMG/M
3300028037\|Ga0265349_1007411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300028047\|Ga0209526_10550254	Not Available	745	Open in IMG/M
3300028748\|Ga0302156_10252427	Not Available	806	Open in IMG/M
3300028785\|Ga0302201_10280211	Not Available	668	Open in IMG/M
3300028806\|Ga0302221_10344004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300028808\|Ga0302228_10278385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300029636\|Ga0222749_10468748	Not Available	677	Open in IMG/M
3300029882\|Ga0311368_10776426	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300029883\|Ga0311327_10781487	Not Available	558	Open in IMG/M
3300029916\|Ga0302148_1064333	Not Available	1046	Open in IMG/M
3300029918\|Ga0302143_1149648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300029922\|Ga0311363_10048285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6660	Open in IMG/M
3300029939\|Ga0311328_10505585	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300030011\|Ga0302270_10527329	Not Available	614	Open in IMG/M
3300030045\|Ga0302282_1347293	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300030518\|Ga0302275_10212048	Not Available	1137	Open in IMG/M
3300030646\|Ga0302316_10333943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300030659\|Ga0316363_10285975	Not Available	662	Open in IMG/M
3300030739\|Ga0302311_10981181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300031231\|Ga0170824_104804095	Not Available	511	Open in IMG/M
3300031715\|Ga0307476_10130334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1796	Open in IMG/M
3300031715\|Ga0307476_10285351	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300031715\|Ga0307476_10517171	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300031718\|Ga0307474_11611608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300031753\|Ga0307477_10353186	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300034163\|Ga0370515_0010526	All Organisms → cellular organisms → Bacteria → Acidobacteria	4395	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.85%
Aquatic	Environmental → Aquatic	20.19%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.54%
Freshwater	Environmental → Aquatic → Freshwater	18.27%
Peat	Environmental → Terrestrial → Peat	15.38%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.77%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.12%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	11.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	7.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.92%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002954	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300023012	Spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1013827621	3300002245	Forest Soil	MPDEGEEIPVQHVEPQSTAGKWILLVVAILFVAAAVYGYVTTQQHVDKLTKDLSDSQNQVAELKNRMQTAEA
JGI20281J44786_1027821	3300002954	Forest Soil	MADEGEQIPVEQESNTGKWILLIVAIVFVAATVYGYVTTTQHVDKITKDLGDSQAQVAELKNRMQTAEASEETLAHQLGITKKELTQRAAQL
JGI26341J46601_100678202	3300003219	Bog Forest Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSKIQVAELKNRMQTAEASEETLARQVGMTKKELAQ
JGI26341J46601_102135971	3300003219	Bog Forest Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSQIQVAELKNRMQTAEASEETLARQVGMTKKELAQ
Ga0062385_109674401	3300004080	Bog Forest Soil	MPEEGEQIPVEQHSNAGKWMLVIVVIVFVAASVYGYVTTQQHVDKLTKDLSDSQAQVAELKSRMQTAEASEDALAHQV
Ga0062384_1000104413	3300004082	Bog Forest Soil	MADEGERIPVEQQSTAGKWILLILAIIFVAGTVYGYVTTQQHVTKLTNDLSASQAQVAELQKRMQSAEAQEETLGQKLGMTK
Ga0062389_1047152061	3300004092	Bog Forest Soil	MPDEGEAHLEPIERESNTGKWILMIVGILFVVASVYGYVSTKMRVDKLTQDLGNSQAQVAELKSRMQSSEASEDALAHQ
Ga0062386_1004719401	3300004152	Bog Forest Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSKIQVAELKNRMQTAEASEETLARQVGMTKKELAQRAAQLQQEQRAAE
Ga0062386_1008537901	3300004152	Bog Forest Soil	MPEEGEQIHVEQQSTAGKWILLFLAIFFVAASVYGYVTTQVRVQKLSADLSASQARIEELQKRVQSSEAE
Ga0062388_1012913581	3300004635	Bog Forest Soil	MPDEGEQMQVEQQSSVGKWILVVLAVIFIAATVFGYVTTGQHIEKLTSDLSGSQAQVAELQKRVQSSEAQEETIAQKLGMTKKELMERAAALQAQQKADE
Ga0070765_1000471223	3300006176	Soil	MPDEGEEIPVQHVEPQSTAGKWILLVVAILFVAAAVYGYVTTQQHVDKLTKDLSDSQNQVAELKNRMQTAEASEETLAHQVGLTKKELAQRAVQLQQ
Ga0116214_12618931	3300009520	Peatlands Soil	MPDEGDQMHVEHVEHQSNAGKWILVVVAIIFVAASVYGFVTTHQHVDKLTKDLTDSKAQVAELKNRMQTAEASEDALAHQVGLTKKELAQRAAELQAEQKTAESRLEKE
Ga0116221_13914561	3300009523	Peatlands Soil	MSDEGGEHIVVEHQSNTGKWILVVLAIAFVAGSAFADYKMYTRQEALTKDLGQSQAQVAELKNRMQTAEASEDALAHQVGMTKKELA
Ga0116225_10614511	3300009524	Peatlands Soil	MPDEGDQMHVEHVEHQSNAGKWILVVVAIIFVAASVYGFVTTQQHVDKLTKDLTDSQAQVAELKNRMQTAEASEDALAHQVGLTKKELAQRAAELQAEQKTAESRLE
Ga0116220_103482811	3300009525	Peatlands Soil	MPDEGDQMHVEHVEHQSNAGKWILVVVAIIFVAASVYGFVTTQQHVDKLTKDLTDSQAQVAELKNRMQTAEASEDAL
Ga0116216_103110292	3300009698	Peatlands Soil	MPEEGEHIHVEQQSSAGKWILVVLAIIFVAASIYGYAAMQQHLEKMAKDLSESQAQVAELQKRMRSAEAQEETLA
Ga0116223_108849612	3300009839	Peatlands Soil	MPDEGEEIQVEHQPTAGKWILIILAVAFVAASVYGYVTTQQHVDKLMKDLGDSQAQVAELKNRMQTAEASEDALAHQVGLTKKELAQRAAQLQAEQKIA
Ga0074046_103413202	3300010339	Bog Forest Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSQIQVAELKNRMQTAEASEETLARQVGMTKKELAQRAA
Ga0074045_100415171	3300010341	Bog Forest Soil	MMPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSKIQVAELKNRMQTAEASEETLARQVGMTKKELAQRAAQLQQ
Ga0074045_103495232	3300010341	Bog Forest Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSQIQVAELKNRMQTAEASEETLARQVGMTKKELAQRAAQLQQ
Ga0137389_118260501	3300012096	Vadose Zone Soil	MPDEGEATHVEHMEQQSTAGKWILLFLAIVFVAATVYGHITTRQHVDRLTKDLSASQAHVAELQKRMQSAEAQEETLGAKLGMTKKE
Ga0137363_102072174	3300012202	Vadose Zone Soil	MPDEGEATHVEHMEQQSTAGKWILLFLAIVFVAATVYGHVTTRQHVDRLTKDLSASQAQVAELQKRIQSAEAQEATLGAKLGMTKKELAQRSSE
Ga0137363_112528261	3300012202	Vadose Zone Soil	MPDEGEEIRMEPMEQQSTAGKWILLFLAILFVAATVYGHVTTRQHVDKLTKDLSASQAQVAELQKRMQSSEAQEETLGEKLGMTKKELSQRAAEL
Ga0137390_117835422	3300012363	Vadose Zone Soil	MPDEGEAIHVEHMEQQSTAGKWILLFLAIVFVAATVYGHVTTRQRVDRLTKDLSASQAQVAELQKRMQSA
Ga0181531_102081513	3300014169	Bog	MADEGDQIPVEAVEQQSTAGKWILVALAVVVVAVAVYGYVTTLQRVDKLTKDLSDSQAQVGELKSRMQTAEASEDALAHQVGLTKKELAQRAAELQAQQKTAESRLQQ*
Ga0182015_101270502	3300014495	Palsa	MSDEGEHVATEHQSNTGKWILVVLVVAFVAGSAYAYFSMYTRQETLTKDLSDSQAQVAELKNRMQTAEASEDALAHQVGLTKKELAERARQLQAEQKAAESR
Ga0187802_101602242	3300017822	Freshwater Sediment	MADEGEEILVEHQSTAGKWILIILAIAFVAASVYGYVTTQQHVDKLTKDLSDSQAQVAELKNRMQTAEASEDALAHQVGLTKK
Ga0187848_104847711	3300017935	Peatland	MADEGEQTHVEPVEQQSNTGKWILVVVAILFVVASVYGYVSTKLRVDKLTQDLGNSQAQVAELKSRMQSAESSEDALAHQVGLTKKELAQRAAELQAQQRAAESRL
Ga0187853_101745832	3300017940	Peatland	MPEEGEQIPIEHTEHQSNTGKWILLFLAIVFVAGAVYGYVTTQQHVEKLTKDLSDSQAQVAELKSRMQTAEASEDALAHQVGLTKKELA
Ga0187872_105008211	3300018017	Peatland	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYAYVTTQQHVDKLTKDLSDSQIQVAELKNRMQTAEASEETLARQVGMTKKELAQRAAQLQ
Ga0187863_106101222	3300018034	Peatland	MAEDGELIHSEQQSSVGKWILVVLAIVFVAASVYGYVTTQQHVDKLTKDLSESQSQVGELQKRMRSAEAQEETLGQKLG
Ga0187859_104471612	3300018047	Peatland	MPDEGEQIQVEQQSTAGKWILVILAILFVAGSVYGYVTTQQHVQKLTADLSASQAQVAELQKRVQSSEAQEETIAQKLGMTKKEL
Ga0210395_106207211	3300020582	Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLGDSQTQVAELKNRMQTAEASEETLARQVGL
Ga0210395_108666181	3300020582	Soil	MADEGEQIPVEQESNTGKWILLIVAIVFVAATVYGYVTTTQHVDKITKDLGDSQAQVAELKNRMQTAEASEETLAHQLGI
Ga0210401_103552362	3300020583	Soil	MPDEGEEIPVQHVEPQSTAGKWILLVVAILFVAAAVYGYVTTQQRVDKLTKDLSDSQNQVAELKNRMQTAEASEETLAHQVGSRR
Ga0210400_100223146	3300021170	Soil	MSEVEQIPVENQSTAGKWILLFLALIFVAAAVYAYVATQHRVDKLTKDLGASQSQVAELQKRMQSDEAQEETLGQRLGMT
Ga0210400_100662682	3300021170	Soil	MPEEGEQIHTEHIEHQSSAGKWILVFLAIIFVAASVYAFVTTQQRVEKLTKDLSASQAQVGELQKRMQSAEAQEETLGAK
Ga0210400_106449902	3300021170	Soil	MVEEVEQTQLEQQSNTGKWILFFLAIVFVAASVYGYVTTQKHVDQLTTDLSESRAQVAELQKRMQSAEAQEETLGQKLGMTKKELSQRAAALQAEQR
Ga0210396_105246082	3300021180	Soil	MVEEVEQTQLEQQSNTGKWILFFLAIVFVAASVYGYVTTQKHVDQLTTDLSESRAQVAELQKRMQSAEAQEETLGQKLGMTKKELSQRAA
Ga0210393_112881961	3300021401	Soil	MPDEGEEMPVLHTEPQSNAGKWILIFVAIIFVAASVYGYVTTQQHVDKLTKDLADGQNQVAELKNRMQTAEASEDALAHQVGLTKKELAQRAAELQQAQKLAESRLEKEEN
Ga0210385_114039981	3300021402	Soil	MPDEEEHIHVEQQSSAGKWILVFLAVVFVAGVVYAHVTTQQRVDTLTKGLSESKAQVEELQKRMQSAEAEE
Ga0210387_105989182	3300021405	Soil	MPDEGEQIQVEHQSTAGKWILLLLAILFVAASVYGYVSTQMHMQKLTADLETSQARIGELQKRVQSSEAQEETIAQRLGMTKKEL
Ga0210386_110823082	3300021406	Soil	MPDEEEHIHVEQQSSAGKWILVFLAVVFVAGVVYAHVTTQQRVDTLTKGLSESKAQVEELQKRMQSAEAEEETLGQKLGMT
Ga0210383_102135571	3300021407	Soil	MPDEGEHVQVEQESNTGKWILVFVAIAFVAAAVYGYVNTQQKVEKLSADLGTSQAQVAELQKRMQSAEAQAETLGQKLGMTKKELSQRA
Ga0210394_103840581	3300021420	Soil	MPDEGDQMHEHVEQQSSAGKWILVILAIAFVAAAVYGFVTTQQHVDKLTKDLSASQAQVAELQKRMQSAEAQEETLGSKLGMTKKELAQR
Ga0210394_106076742	3300021420	Soil	MPDEGEEMPVLHTEPQSNAGKWILIFVAIIFVAASVYGYVTTQQHVDKLTKDLADGQNQVAELKNRMQTAEASEDALAHQVG
Ga0210394_116716441	3300021420	Soil	MPEEGEQIHVEHQSTAGKWILLFLAILFVAASVYGYVTTQVHVQKLTADLDASQARIGELQKRVQSSEAQEETIAQRLG
Ga0210384_109483352	3300021432	Soil	MPDEGELVQVEHESNTGKWILVFVAIALVAAAVYGYVNTQQKVEKLTADLGNSQAQVAELQKRMQSAEAQEET
Ga0210391_101235131	3300021433	Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLGDSQTQVAELKNRMQTAEA
Ga0210391_105098661	3300021433	Soil	MPDEGEQIQAEQQSSAGKWILVVLAVIFIAATVFGYVTTGQHIEKLTSDLSASQAQVAELQKRVQSSEAQEET
Ga0210391_111063231	3300021433	Soil	MPEEGEQIHTEHLEQQSTAGKWILVFLAIIFVAGVVYGYVTTQQRVEKLTKDLGDSQAQVGELQKRMQSSEAQEETIAQKLGMTKKELMERAGALQ
Ga0210392_110921662	3300021475	Soil	MPEVEEIHVEQQSNAGKWILIVLAIVFVAASVYGYVTTQQHVDKLTKDLGDSQAQVGELKNRMQTAEASEETLAHQ
Ga0210398_110842522	3300021477	Soil	MPEEGEQIQVEQQSTAGKWILVVVAIAFVAASVYGYVTTQQHVDKLTKDLSDSQGQVGELQKRMQSSEAQQETLAQKLGMTKKELV
Ga0210410_112276641	3300021479	Soil	MPEEGEQIHTEHIEHQSSAGKWILVFLAIIFVAASVYAFVTTQQRVEKLTKDLSASQAQVGELQKRMQSAEAQEETLGAKLGMTKKELAQ
Ga0224541_10024751	3300022521	Soil	MAEDGELIHSEQQSSAGKWILVVLAIVFVAASVYGYVTTQQHVDKLTKDLSESQSQVGELQKRMRSAEAKEETLGQKLGMTKKELAQRARELQ
Ga0212123_106843282	3300022557	Iron-Sulfur Acid Spring	MSEEGEHTQVEQQSSAGKWILVVLAVVFVAASIYGYATMQQHLEKMAKDLSDSQTQVAELQKRMRSAEAQEETLGQKLGMTKKELAQ
Ga0224571_1109172	3300022734	Rhizosphere	MPDEGEQIHVEQQSTTGKWILVFVAIVFVAAAVYGYVTTQQHVDKLTKDLSDSQAQVAELKSRMQTAEASEDALAHQVGLTKKELAQRAAELQAQQ
Ga0228597_1007651	3300023012	Plant Litter	MPDEGEQIHVEQQSTTGKWILVFVAIVFVAAAAYGYVTTQQHVDKLTKDLSDSQGQVAELKSRMQTAEA
Ga0228597_1092831	3300023012	Plant Litter	MADEGEQIHGEQQSTAGKWILVVLAILFVAAAVYGYVTTQQRVDKLTTDLSSSQAQVGELQKRMQSSEAQEE
Ga0224561_10056981	3300023030	Soil	MPEEGEHIPMEHAEPQSNTGKWILLFLAIIFVAGAGYGYVTTQQHVDKLTKDLGDSQAQVAELKSRMQTAEASEDALAHQVGLTKKELAQRAAELQAQQKAT
Ga0137417_13773394	3300024330	Vadose Zone Soil	MEQQSTAGKWILLFLAIIFVAATVYGHITTRQHVDKLTKDLSASQAQVAELQKRMQSAEARMRRWARSLG
Ga0209171_104937032	3300025320	Iron-Sulfur Acid Spring	MSEEGEHTQVEQQSSAGKWILVVLAVVFVAASIYGYATMQQHLEKMAKDLSDSQTQVAELQKRMRSAEAQEETLGQKL
Ga0208241_10356661	3300027297	Forest Soil	MADEGEQIPVEQESNTGKWILLIVAIVFVAATVYGYVTTTQHVDKITKDLGDSQAQVAELKNRMQTAEASEETLAHQLGITKKE
Ga0209332_11059721	3300027439	Forest Soil	MPDEGEEIPVQHVEPQSTAGKWILLVVAILFVAAAVYGYVTTQQHVDKLTKDLSDSQNQVAELKNRMQTAEASEETLA
Ga0208044_12105541	3300027625	Peatlands Soil	MPDEGDQMHVEHVEHQSNAGKWILVVVAIIFVAASVYGFVTTQQHVDKLTKDLTDSQAQVAELKNRMQTAEASEDALAHQVGLTK
Ga0209422_10832001	3300027629	Forest Soil	MAEQDEQVPIEHMEHIEHIEQQSTAGKWILLFLAIIFVAVAGYGYVTTQQRVDKLTKTLSDSQAQVGELQKRMQSAEAQEE
Ga0209420_11396392	3300027648	Forest Soil	MADEGEQIPVEQESNTGKWILLIVAIVFVAATVYGYVTTTQHVDKITKDLGDSQAQVAELKNRMQTAE
Ga0209007_11532981	3300027652	Forest Soil	MPDEGEQIQVEQQSTAGKWILIILAILFVAGSVYGYVTTQQHVEKLTTDLSASQAQVAELQKRVQSSEA
Ga0209333_10902542	3300027676	Forest Soil	MPDEGEQIQVEQQSTAGKWILIILAILFVAGSVYGYVTTQQHVEKLTTDLSASQAQVAELQKRVQSSEAQEETIAQKLGMTKKELLERAG
Ga0209910_100089102	3300027803	Thawing Permafrost	MAEDGELIHSEQQSSAGKWILVVIAIVFVAASVYGYVTTQQHVDKLTKDLSESQSQVGELQKRMRSAEAQEETLGQKLGMTKKELAPVSYTHLDVYKRQGP
Ga0209656_101120281	3300027812	Bog Forest Soil	MPDEGEQIQVEHQSNTGKWILVIVAIVFVAATVYGYVTTQQKVDKLTKDLGDSQAQVAELQKRMQSEEAQSETLGQKLGMTKKEL
Ga0209040_100533712	3300027824	Bog Forest Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSKIQVAELKNRMQTAEASEETLARQVGMTKKELA
Ga0209040_102493892	3300027824	Bog Forest Soil	MPEEGEQIHVEQQSTAGKWILLFLAIFFVAASVYGYVTTQVRVQKLSADLSASQARIEELQKRVQSSEAEEET
Ga0209040_104425532	3300027824	Bog Forest Soil	MPDEGEELHVEHQSTAGKWILIILALAFVAASVYGYVTTQQHVDKLTKDLSDSQIQVAELKNRMQTAEASEETLARQVGMTKKELA
Ga0209693_105365052	3300027855	Soil	MPEEGEQIVAEQQSSAGKWILVVLAVIFIAATVFGYVTTGQHIEKLTSDLSASQAQVAELQKRVQSTEAQEETI
Ga0209169_104846232	3300027879	Soil	MPDEGEEIPVQHVEPQSTAGKWILLVVAILFVAAAVYGYVTTQQHVDKLTKDLSDSQNQVAELKNRMQTAEASEETLAHQVGLTKK
Ga0209624_110578272	3300027895	Forest Soil	MPEEGEQIQVEQQSTAGKWILLFLAIIFVAASVYGYVSTQQHVEKLTRDLSDSQAQVSELQKRMQSSEAQEETLGQKLGMTKK
Ga0209415_111316801	3300027905	Peatlands Soil	MADEGEHLQVEHQSTAGKWILLILAIIFVAGAVYGYVTTQLHVAKLTNDLSTSQAQVAELQKRMQSAEAQEETLGQKL
Ga0265349_10074112	3300028037	Soil	MVEEVEQAQLEQQSNTGKWILFFLAIFFVAASVYGYVTTQKHVDQLTTDLSASRAQVAELQKRMQSAEAQEETLGQKLGMTKKE
Ga0209526_105502542	3300028047	Forest Soil	MPDEGENLHIEQQSSAGKWILVVVAILFVGASVYAYVTNQQHVDKLTKDLADSQAQVAELKNRMQTAEASEDALAHQVGLTKKELAQRATELQQQQRS
Ga0302156_102524271	3300028748	Bog	MPEEGEQIPIEHTEHQSNTGKWILLFLAIVFLAGAVYGYVTTQQHVEKLTKDLGDSQAQVAELKSRMQTAEASEDALAHQVGLTKKELAQRAAEL
Ga0302201_102802111	3300028785	Bog	MPEEGEQIPIEHTEHQSNTGKWILLFLAIVFLAGAVYGYVTTQQHVEKLTKDLGDSQAQVAELKSRMQTAEASEDALAHQVGLT
Ga0302221_103440042	3300028806	Palsa	MPEEGEQIHVEQQSTAGKWILIVLAIVFVAASVYGYVTTQQREDKLTKDLSDSQAQVGELQKRMRSAEAQEETLGQKLGMTKK
Ga0302228_102783851	3300028808	Palsa	MAEDGELIHSEQQSSAGKWILVVLAIVFVAASVYGYVTTQQHVDKLTKDLSESQSQVGELQKRMRSAEA
Ga0222749_104687481	3300029636	Soil	MPDSGEETHMEHVEQQSTTGKWILLFLAIIFVAAVVYGYVTTHQQVDKLTKDLAASQAQVGELQKRMQSA
Ga0311368_107764261	3300029882	Palsa	MPDEGEQIQVEHQSNTGKWILVFVAVLFVAASVYGYVTTQQKVDKLTKDLGDSQSQVAELQKRMQSAEAQSETLGQ
Ga0311327_107814872	3300029883	Bog	MPDEGEVIQVEPQSNTGKWILIVLAVLFAGATVYGYVTTQQHIDKLTKDLNDSQTQVAELKNRMQTAEASEETLGHQLGLTKKELTQRALQLQLQQKEAESR
Ga0302148_10643332	3300029916	Bog	MTVEPEETHLEHGQQSTAGKWILLFLAIVFVAAAVYGYVITDQKVEKLTSDLSASRTQVGELQKRMQSAEAQEETLGEK
Ga0302143_11496482	3300029918	Bog	MAEDGELIHSEQQSSVGKWILVVLAIVFVAASVYGYVTTQQHVDKLTKDLSESQSQVGELQKRMRSAEAQ
Ga0311363_100482855	3300029922	Fen	MPEEGEQIPIEHTEHQSNTGKWILLFLAIVFVAGAVYGYVTTQQHVEKLTKDLSDSQAQVAELKSRMQTAEASEDAL
Ga0311328_105055852	3300029939	Bog	MPDEGEVIQVEPQSNTGKWILIVLAVLFAGATVYGYVTTQQHIDKLTKDLNDSQTQVAELKNRMQTAEA
Ga0302270_105273291	3300030011	Bog	MTVEPEETHLEHGQQSTAGKWILLFLAIVFVAAAVYGYVITDQKVEKLTSDLSASRTQVGELQKRMQSAEAQEE
Ga0302282_13472932	3300030045	Fen	MPDEGEVIQVEPQSNTGKWILIVLAVLFAGATVYGYVTTQQHIDKLTKDLNDSQTQVAELKNRMQTAEASEETL
Ga0302275_102120482	3300030518	Bog	MPDEGEQIQSEPSSEHMEGQSSVGKWILIVLAIMFVAASVYGYVTTQQHVDKLTSDLTASQSQVAELQKRMRSAEAQEETLGEKLGMTK
Ga0302316_103339432	3300030646	Palsa	MPDEGEEIPVHVEPQSNAGKWILIFVAIVFVAASVYGYVTTQQHVEKLTKDLSDSQTQVAELKNRMQTAEASEETLAHQVGLTKK
Ga0316363_102859751	3300030659	Peatlands Soil	MADEGEHLQVEHQSTAGKWILLILAIIFVAGAVYGYVTTQLHVAKLTNDLSTSQAQVAELQKRMQSAEAQEETLGQKLGMTKKELAQ
Ga0302311_109811811	3300030739	Palsa	MAEDGELIHSEQQSSAGKWILVVLAIVFVAASVYGYVTTQQHVDKLTKDLSESQSQVGELQKRMRSAEAQEETLGQ
Ga0170824_1048040951	3300031231	Forest Soil	MPVEGEEIPTGLDHQSTAGKWILLVLAIIFVAATVYGHVTTRQHVDKLTKDLTASQAQVAELQKRMQSAEA
Ga0307476_101303341	3300031715	Hardwood Forest Soil	MTDEVEQPHMEHMEQQSTAGKWILLFLALIFVAAAVYGYVTTQQHVGKLTKDLGASQAQVAELQKRMQSAEAQEETLGQKLGMTKKDLAQ
Ga0307476_102853512	3300031715	Hardwood Forest Soil	MPEEGEQIHSEQQSTAGKWILLVLAILFVAASVYGYVSTQIHVQKLNADLSASQAQIGELQKRVQSSEAQEETIAQKLGMTKKELMQRAAALQAQQKA
Ga0307476_105171712	3300031715	Hardwood Forest Soil	MADEGEQIPVEHIEPMEQQSTAGKWILLFLAILVVALAVFGYVTTQQRVAQLTKSLSASQAQVADLQKRMQSAEAQEETLGQK
Ga0307474_116116082	3300031718	Hardwood Forest Soil	MVDEGEQIPMDHTEHIEHVEQQSTAGKWILLFLAILVVALAVFGYVTTQQRVAQLTKSLSASQAQVADLQKRMQSAEAQEETLGQKVGMT
Ga0307477_103531861	3300031753	Hardwood Forest Soil	MPDEGEEIPVHVEPQSNAGKWILLFVAIIFVAASVYGYVTTQQHVEKLTKDLGDSQNQVAELKNRMQTAEASEETLAHQVGLTKKE
Ga0370515_0010526_2_226	3300034163	Untreated Peat Soil	MPDEGEQIPVEGQSSTGKWILVILAILFVGASVYGFVSTQQHVDKLTKDLSDSQAQVTELKSRMQTAEASEDALA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097746

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences