Metagenome / Metatranscriptome Family F097752

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097752
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	78 residues
Representative Sequence	MVHIFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLLLTPLAGALLILSFKPPRTARSLAETASRG
Number of Associated Samples	71
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.73 %
% of genes near scaffold ends (potentially truncated)	21.15 %
% of genes from short scaffolds (< 2000 bps)	54.81 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (28.846 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.43% β-sheet: 0.00% Coil/Unstructured: 40.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00364	Biotin_lipoyl	26.92
PF00639	Rotamase	16.35
PF13624	SurA_N_3	8.65
PF13620	CarboxypepD_reg	6.73
PF02786	CPSase_L_D2	6.73
PF13616	Rotamase_3	5.77
PF00892	EamA	1.92
PF03492	Methyltransf_7	1.92
PF00830	Ribosomal_L28	1.92
PF13145	Rotamase_2	1.92
PF06026	Rib_5-P_isom_A	1.92
PF05193	Peptidase_M16_C	0.96
PF04228	Zn_peptidase	0.96
PF06764	DUF1223	0.96
PF14518	Haem_oxygenas_2	0.96
PF00266	Aminotran_5	0.96
PF03070	TENA_THI-4	0.96
PF13533	Biotin_lipoyl_2	0.96
PF10431	ClpB_D2-small	0.96
PF01039	Carboxyl_trans	0.96
PF08530	PepX_C	0.96
PF15902	Sortilin-Vps10	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0760	Peptidyl-prolyl isomerase, parvulin family	Posttranslational modification, protein turnover, chaperones [O]	16.35
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	1.92
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	1.92
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.96
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.96
COG2321	Predicted metalloprotease	General function prediction only [R]	0.96
COG2936	Predicted acyl esterase	General function prediction only [R]	0.96
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.96
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.23 %
Unclassified	root	N/A	5.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.23 %
Unclassified	root	N/A	5.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.23 %
Unclassified	root	N/A	5.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.73 %
Unclassified	root	N/A	5.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	31.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.27 %
Unclassified	root	N/A	5.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	26.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	5.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	5.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	5.77 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.92 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	1.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	5.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.92 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.96 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	5.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.92 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	0.96 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1001336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2990	Open in IMG/M
3300001084\|JGI12648J13191_1007216	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300001087\|JGI12677J13195_1000307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7323	Open in IMG/M
3300001087\|JGI12677J13195_1000317	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7111	Open in IMG/M
3300001087\|JGI12677J13195_1000845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3835	Open in IMG/M
3300001166\|JGI12694J13545_1009492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1087	Open in IMG/M
3300001175\|JGI12649J13570_1000487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6986	Open in IMG/M
3300001471\|JGI12712J15308_10005599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3520	Open in IMG/M
3300001471\|JGI12712J15308_10037705	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300001593\|JGI12635J15846_10085318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2300	Open in IMG/M
3300001593\|JGI12635J15846_10338879	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300002245\|JGIcombinedJ26739_100030210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4789	Open in IMG/M
3300002245\|JGIcombinedJ26739_100152917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2180	Open in IMG/M
3300002245\|JGIcombinedJ26739_100182640	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300002245\|JGIcombinedJ26739_100826583	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300003505\|JGIcombinedJ51221_10086198	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300004080\|Ga0062385_10146753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1213	Open in IMG/M
3300004082\|Ga0062384_100010217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3578	Open in IMG/M
3300004092\|Ga0062389_100486190	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300004635\|Ga0062388_102631978	Not Available	529	Open in IMG/M
3300005591\|Ga0070761_10014102	All Organisms → cellular organisms → Bacteria	4464	Open in IMG/M
3300005602\|Ga0070762_10089261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1766	Open in IMG/M
3300005921\|Ga0070766_10000328	All Organisms → cellular organisms → Bacteria	20161	Open in IMG/M
3300005921\|Ga0070766_10323673	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300005944\|Ga0066788_10177784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005950\|Ga0066787_10005849	All Organisms → cellular organisms → Bacteria → Acidobacteria	1863	Open in IMG/M
3300005952\|Ga0080026_10093065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300005952\|Ga0080026_10134929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300006176\|Ga0070765_100000506	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23522	Open in IMG/M
3300006176\|Ga0070765_100002899	All Organisms → cellular organisms → Bacteria	10927	Open in IMG/M
3300006176\|Ga0070765_100310820	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300006893\|Ga0073928_10012279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9850	Open in IMG/M
3300006893\|Ga0073928_10014355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8767	Open in IMG/M
3300006893\|Ga0073928_10020157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6893	Open in IMG/M
3300010341\|Ga0074045_10311718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300010876\|Ga0126361_10821492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300011120\|Ga0150983_11743852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1529	Open in IMG/M
3300014489\|Ga0182018_10003608	All Organisms → cellular organisms → Bacteria	13773	Open in IMG/M
3300014489\|Ga0182018_10542373	Not Available	613	Open in IMG/M
3300014495\|Ga0182015_10001575	All Organisms → cellular organisms → Bacteria → Acidobacteria	29683	Open in IMG/M
3300014495\|Ga0182015_10056153	All Organisms → cellular organisms → Bacteria → Acidobacteria	2853	Open in IMG/M
3300018034\|Ga0187863_10000519	All Organisms → cellular organisms → Bacteria → Acidobacteria	32556	Open in IMG/M
3300018034\|Ga0187863_10041920	All Organisms → cellular organisms → Bacteria → Acidobacteria	2645	Open in IMG/M
3300018042\|Ga0187871_10341735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300019258\|Ga0181504_1511803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300020579\|Ga0210407_10509315	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300020580\|Ga0210403_10031433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4244	Open in IMG/M
3300020582\|Ga0210395_10864628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300020583\|Ga0210401_10055911	All Organisms → cellular organisms → Bacteria	3721	Open in IMG/M
3300021088\|Ga0210404_10079368	All Organisms → cellular organisms → Bacteria → Acidobacteria	1613	Open in IMG/M
3300021181\|Ga0210388_10026295	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4752	Open in IMG/M
3300021401\|Ga0210393_10009902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7440	Open in IMG/M
3300021401\|Ga0210393_10806229	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300021401\|Ga0210393_11074480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300021402\|Ga0210385_10370604	Not Available	1072	Open in IMG/M
3300021420\|Ga0210394_10002230	All Organisms → cellular organisms → Bacteria → Acidobacteria	27242	Open in IMG/M
3300021420\|Ga0210394_10788616	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300021432\|Ga0210384_10595849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300021477\|Ga0210398_10136142	All Organisms → cellular organisms → Bacteria → Acidobacteria	1997	Open in IMG/M
3300021478\|Ga0210402_11534562	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300022518\|Ga0224548_1012718	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300022521\|Ga0224541_1000077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	9718	Open in IMG/M
3300022557\|Ga0212123_10015297	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9601	Open in IMG/M
3300022557\|Ga0212123_10017882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8428	Open in IMG/M
3300022557\|Ga0212123_10034865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5029	Open in IMG/M
3300022557\|Ga0212123_10360191	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300026214\|Ga0209838_1043526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300027334\|Ga0209529_1017753	Not Available	1201	Open in IMG/M
3300027545\|Ga0209008_1002892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4096	Open in IMG/M
3300027567\|Ga0209115_1068922	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300027590\|Ga0209116_1025195	All Organisms → cellular organisms → Bacteria → Acidobacteria	1242	Open in IMG/M
3300027619\|Ga0209330_1000417	All Organisms → cellular organisms → Bacteria → Acidobacteria	18262	Open in IMG/M
3300027648\|Ga0209420_1000071	All Organisms → cellular organisms → Bacteria → Acidobacteria	64773	Open in IMG/M
3300027652\|Ga0209007_1000076	All Organisms → cellular organisms → Bacteria → Acidobacteria	61296	Open in IMG/M
3300027667\|Ga0209009_1016760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1764	Open in IMG/M
3300027684\|Ga0209626_1036290	All Organisms → cellular organisms → Bacteria → Acidobacteria	1214	Open in IMG/M
3300027767\|Ga0209655_10007512	All Organisms → cellular organisms → Bacteria → Acidobacteria	3729	Open in IMG/M
3300027767\|Ga0209655_10037145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1633	Open in IMG/M
3300027853\|Ga0209274_10484212	Not Available	640	Open in IMG/M
3300027908\|Ga0209006_10034966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4548	Open in IMG/M
3300027908\|Ga0209006_10061451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3359	Open in IMG/M
3300027908\|Ga0209006_10078522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2938	Open in IMG/M
3300027908\|Ga0209006_10100013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2571	Open in IMG/M
3300028016\|Ga0265354_1024064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300028731\|Ga0302301_1039424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1321	Open in IMG/M
3300028775\|Ga0302231_10311869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300028776\|Ga0302303_10094975	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1098	Open in IMG/M
3300028801\|Ga0302226_10196757	All Organisms → cellular organisms → Bacteria → Acidobacteria	864	Open in IMG/M
3300028871\|Ga0302230_10193305	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300028906\|Ga0308309_10001385	All Organisms → cellular organisms → Bacteria → Acidobacteria	14493	Open in IMG/M
3300028906\|Ga0308309_10008387	All Organisms → cellular organisms → Bacteria → Acidobacteria	6366	Open in IMG/M
3300029943\|Ga0311340_10759004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300030043\|Ga0302306_10021940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2641	Open in IMG/M
3300030760\|Ga0265762_1038509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300030862\|Ga0265753_1020664	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300030879\|Ga0265765_1057368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300031234\|Ga0302325_12620376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300031236\|Ga0302324_101720650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300031708\|Ga0310686_101210134	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300031708\|Ga0310686_102829662	All Organisms → cellular organisms → Bacteria → Acidobacteria	18434	Open in IMG/M
3300031708\|Ga0310686_104916046	All Organisms → cellular organisms → Bacteria	15364	Open in IMG/M
3300031708\|Ga0310686_106180114	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300031708\|Ga0310686_112072190	Not Available	946	Open in IMG/M
3300031708\|Ga0310686_117374724	All Organisms → cellular organisms → Bacteria → Acidobacteria	2065	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.69%
Aquatic	Environmental → Aquatic	16.35%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.12%
Peat	Environmental → Terrestrial → Peat	10.58%
Freshwater	Environmental → Aquatic → Freshwater	9.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	6.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	38.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	6.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	38.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.58%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.62%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.65%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	6.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	28.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	6.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.88%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001087	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10013364	3300001084	Forest Soil	MLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLTFWKTFTLSFFLTPLAGALMVLSFKPPRTARSLAETTSRG*
JGI12648J13191_10072162	3300001084	Forest Soil	MFHVILIWMVVWLALGIAAVAWTMLCGATAHWGEKEGLAFWQTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG*
JGI12677J13195_10003077	3300001087	Forest Soil	MFQSFFISMGSWSLLGIAVLGWSFLSGIIAHWGEQEGLVFWHTFALCFILTPLAGALMVLTFKPPRTGRSVAETASRG*
JGI12677J13195_10003174	3300001087	Forest Soil	MFQSFLAWTAAWFVLGIAALAWTLLCGVVAHWGEKEGLAFWRTFGLCILLTPLAGALVVLTFKPPRTGRSMAQTASRG*
JGI12677J13195_10008454	3300001087	Forest Soil	MLQSFLAFAAGWLLLSITALAWTMLCGLVAHWGEKEGLSFWRTFTLCILLTPLAGALVVLAFKPPRTGRSLAETASRG*
JGI12694J13545_10094921	3300001166	Forest Soil	MLHIFLVWFAAGLVLATIALSWIMLCVATAHWGEKEGLAFWKTFALSFFLTPLAGTLMVLSFKPPRAARSLAETASRG*
JGI12649J13570_10004874	3300001175	Forest Soil	MFHVILIWMVVWLALGIAAVAWTMLCGATAHWGEKEGLAFWHTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG*
JGI12712J15308_100055995	3300001471	Forest Soil	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLSFKKTFALCLVLTPLAGALLILSFKPSRTARSLAETASRG*
JGI12712J15308_100377052	3300001471	Forest Soil	MVHIFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLLLTPLAGALLILSFKPPRTARSLAETASRG*
JGI12635J15846_100853182	3300001593	Forest Soil	MFHVILIWMVVWLVLGIAAVAWTMLCGATAHWGEKEGLAFWQTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG*
JGI12635J15846_103388792	3300001593	Forest Soil	LRQAEPESTWETQMLHIFLVWLAAGLVLATAALAWIMVCGATANWAEKEGLAFWKTFAFSFFLTPLAGVLMVLSFKPPRAARSLAETASRG*
JGIcombinedJ26739_1000302103	3300002245	Forest Soil	MFQSFLAWTAAWFVLGIAALAWTLLCGVVAHWGEKEGLAFWRTFXLCILLTPLAGALVVLTFKPPRTGRSMAQTASRG*
JGIcombinedJ26739_1001529173	3300002245	Forest Soil	MVHTFXIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFXKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG*
JGIcombinedJ26739_1001826402	3300002245	Forest Soil	MVHIFLIWFAAALVLTTTALGWIMLCGVTAHWGEKEGLPFKKTFALSVVLTPLAGALLILSFKPPRTTRSLAETASRG*
JGIcombinedJ26739_1008265832	3300002245	Forest Soil	MVHVFLIWFAAALVLTTAGLLWIMLCGVTAQWGEKEGLPFKKTFAPCLVLTPLAGALLILSFKPPRTAR
JGIcombinedJ51221_100861982	3300003505	Forest Soil	MLHIFLIWFAAVLVLATAALAWIMVCGAIAQWAEKEGLAFWKTFALSFFLTPLAGALMVLSFKPPRTTRSLAETASRG*
Ga0062385_101467532	3300004080	Bog Forest Soil	MVHVFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGVPFKRTFALCLVLSPLAGALLIFSFKPPRTARSLAETASRG*
Ga0062384_1000102174	3300004082	Bog Forest Soil	MISQVHFVWILGCLLLATAGLVWIMLCGVTAQWGEKEGLGFWKTFTLSFLLSPLAGLLVVVAFRSPRTGRSLAETASRG*
Ga0062389_1004861902	3300004092	Bog Forest Soil	MFHVILIWMVGWLVLGIAAVGWTMLCGVTAHWGEKEGLSFWQTFALCLFLTPLAGAVVVLAFKPPRSRRSLAETASRG*
Ga0062388_1026319781	3300004635	Bog Forest Soil	MFHVILIWMVGWLVLGIAAVGWTMLCGVTAHWGEKEGLSFWQTFALCLFLTPLAGAVVVLAFKPPRSRRSLAETASR
Ga0070761_100141026	3300005591	Soil	MLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLTFWKTFTLSFFLTPLAGALMVLSFKPPR
Ga0070762_100892612	3300005602	Soil	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG*
Ga0070766_100003285	3300005921	Soil	MLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLPFWKTFTLSFFLTPLAGALMVLSFKPPRPARSLAETASRG*
Ga0070766_103236731	3300005921	Soil	IGGRMLQSFLAWMAAWLVLSIATLAWTVLSGVVAHWGEKEGLAFWRTFALCILLTPLAGALVVLAFKPPRTGRSMAQTASRG*
Ga0066788_101777841	3300005944	Soil	VGWLVLGIVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG*
Ga0066787_100058493	3300005950	Soil	MKAGFESPEGTRGKGMFHVILIWMVGWLVLGIVAVAWTILCGATAHWAEKEGFAFWQNFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG*
Ga0080026_100930652	3300005952	Permafrost Soil	GKGMFHVILIWMVGWLVLGIVAVAWTILCGATAHWAEKEGFAFWQNFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG*
Ga0080026_101349291	3300005952	Permafrost Soil	MFHVILIWMVGWLVLGIVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG*
Ga0070765_10000050615	3300006176	Soil	MLHSFLIWFAAVLVMGSAALIWVMLCGATAHWGEKEGLTFWKTFTLSFLLTPLAGALAVLAFKPSRTGRTLAHTASRG*
Ga0070765_1000028997	3300006176	Soil	MLHIFLVWLAAGLLLATVTLLWIMFCGATAHWGEKEGLAFWKTFALSFFLTPLAGALMVLSFKPPRATRSLAETASRG*
Ga0070765_1003108202	3300006176	Soil	MVHIFLIWFAVALVLTTTALGWIMLCGVTAHWGEKEGLPFRKTFALSVVLTPIAGALLILSFKPPRTARSLAETATRG*
Ga0073928_100122795	3300006893	Iron-Sulfur Acid Spring	MLHIFLIWLAAGLVLATAALAWIMVCGATAHWGEREGIAFWKTFALSYFLSPLAGALLVLSFKPPRTARSLAETASRG*
Ga0073928_100143554	3300006893	Iron-Sulfur Acid Spring	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFRKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG*
Ga0073928_100201574	3300006893	Iron-Sulfur Acid Spring	MVHIFMIWFAAALVLATTALGWIMLCGVTAHWGEKEGLPFKKTFALSVVLTPLAGALLILSFKPPRTTRSLAETASRG*
Ga0074045_103117182	3300010341	Bog Forest Soil	MFHVILIWMVGWLVLGIVAVAWTMLCGATAHWGEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSFAETAGRG*
Ga0126361_108214922	3300010876	Boreal Forest Soil	MVHIFLIWFAAALVLTTTALGWIMLCGVTAHWGEKEGLPFKKTFALSVVLTPLAGALLILSLKPPRTTRSLAETASRG*
Ga0150983_117438521	3300011120	Forest Soil	SRAWIHLGDTMLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLAFWKTFTLSFFLTPLAGALMVLSFKPPRPARSLAETASRG*
Ga0182018_100036087	3300014489	Palsa	MFHVILIWMVGWLVLGIAAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG*
Ga0182018_105423732	3300014489	Palsa	MFHVILIWMVVWLALGIAAVAWTMLCGATAHWGEKEGLAFWQTFTLCLLLTPLAGALVVLAFKPPRSGRSLA
Ga0182015_100015757	3300014495	Palsa	MLHIFLVWLAAGLVLAIAALAWIMLCGATAHWGEKEGLAFWKTFALSFFLTPLAGALMVLSFKPPRTARSLAETASRG*
Ga0182015_100561532	3300014495	Palsa	MFHVILIWMVGWLVLGIAAVGWTMLCGVTAHWGEKEGLSFWQTFALCLFLTPLAGAVVVLTFKPPRSGRSLAETASRG*
Ga0187863_1000051922	3300018034	Peatland	MFHVILIWMVGWLVLGIAAVGWAMLCGVTAHWGEKEGLSFWQTFALCLFLTPLAGAVVVLAFKPPRSGRSLAETASRG
Ga0187863_100419205	3300018034	Peatland	MISQVHFVWILGCLLLATAGLVWVMICGVTAQWGEKEGLAFWKTFTLSFLLSPLAGLLLVLAFRSPRTGRSLAETASRG
Ga0187871_103417352	3300018042	Peatland	MFHVILIWMVVWLALGIAAVAWTMLCGATAHWGEKEGLAFWHTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG
Ga0181504_15118031	3300019258	Peatland	VLESPEGTWGKGMFHVILIWMVGWLVLGIVAVAWTMLCGATAHWGEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSFAETAGRG
Ga0210407_105093152	3300020579	Soil	MVHIFLIWFAAALVLTTTALGWIMLCGVTAHWGEKEGLPFKKTFALSVVLTPLAGALLILSFKPPRTTRSLAETASRG
Ga0210403_100314333	3300020580	Soil	MVHAFLVWFAAALVLTTAGLIWIMLCGVTAQWGEKEGLPFKKTFALCLALTPLAGALLILSFKPPRTARSLAETASRG
Ga0210395_108646282	3300020582	Soil	RIHLGDTMVHVFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0210401_100559112	3300020583	Soil	MVHIFLIWFAVALVLTTTALGWIMLCGVTAHWGEKEGLPFRKTFALSVVLTPIAGALLILSFKPPRTARSLAETATRG
Ga0210404_100793683	3300021088	Soil	MVHVFLIWFAAALVLTTAALVWIMLCGVTAQWGEREGLPFKKTFALCLLLTPLAGALLILSFKPPRTARSLAETASRG
Ga0210388_100262954	3300021181	Soil	MVHVFLVWLAAGLVLATVALSWIMLCGLTAHWGEKEGLAFWKTFALSFFLTPLAGGLLILSFKPPRATRSLAETASRG
Ga0210393_100099024	3300021401	Soil	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0210393_108062291	3300021401	Soil	MLHSFLIWFAAVLLMGSAALIWIMFCGATAHWGQKEGLTFWKTFTLSFLLTPLAGALVVLAFKPSRTGRTLAHTASRG
Ga0210393_110744802	3300021401	Soil	MVHIFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0210385_103706042	3300021402	Soil	MLHIFLIWFAAVLVLATAALAWIMVCGAIAQWAEKEGLAFWKTFALSFFLTPLAGALMVLSFKPPRTTRSLAETASRG
Ga0210394_1000223019	3300021420	Soil	MLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLPFWKTFTLSFFLTPLAGALMVLSFKPPRPARSLAETASRG
Ga0210394_107886162	3300021420	Soil	MVHIFLIWFAAALLLTTAALGWIMLCGATAQWGEKEGLPFKKTFALSLVLTPLAGALLILSFKPPRAARSLAETASRG
Ga0210384_105958492	3300021432	Soil	MVHIFLIWFAAALVLTTTALGWIMLCGVTAHWGEKEGLPFRKTFALSVVLTPIAGALLILSFKPPRTARSLAETATRG
Ga0210398_101361422	3300021477	Soil	MLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLAFWKTFTLSFFLTPLAGALMVLSFKPPRPARSLAETASRG
Ga0210402_115345621	3300021478	Soil	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFNKTFALCLLLTPLAGALLILSFKPPRTARSLTETASRG
Ga0224548_10127182	3300022518	Soil	MFHVILIWMVGWLVLGIAAVGWTMLCGVTAHWGEKEGLSFWQTFALCLFLTPLAGAVVVLTFKPPRSGRSLAETASRG
Ga0224541_10000773	3300022521	Soil	MFHVILIWMVVWLALGIAAVAWTMLCGATAHWGEKEGLAFWQTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG
Ga0212123_100152975	3300022557	Iron-Sulfur Acid Spring	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFRKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0212123_100178827	3300022557	Iron-Sulfur Acid Spring	MVHIFMIWFAAALVLATTALGWIMLCGVTAHWGEKEGLPFKKTFALSVVLTPLAGALLILSFKPPRTTRSLAETASRG
Ga0212123_100348654	3300022557	Iron-Sulfur Acid Spring	MLHIFLIWLAAGLVLATAALAWIMVCGATAHWGEREGIAFWKTFALSYFLSPLAGALLVLSFKPPRTARSLAETASRG
Ga0212123_103601912	3300022557	Iron-Sulfur Acid Spring	MVHIFLIWFAAALVVTTVGLVWIMLCGVTAQWGEREGLPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0209838_10435262	3300026214	Soil	FHVILIWMVGWLVLGIVAVAWTILCGATAHWAEKEGFAFWQNFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0209529_10177531	3300027334	Forest Soil	MLHIFLVWLAAGLVLATAALAWIMVCGATANWAEKEGLAFWKTFAFSFFLTPLAGVLMVLSF
Ga0209008_10028921	3300027545	Forest Soil	TMVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFRKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0209115_10689221	3300027567	Forest Soil	MLHIFLVWLAAGLVLATAALAWIMVCGATANWAEKEGLAFWKTFAFSFFLTPLAGVLMVLSFKPPRAARSLAETASRG
Ga0209116_10251953	3300027590	Forest Soil	MFHVILIWMVVWLVLGIAAVAWTMLCGATAHWGEKEGLAFWQTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG
Ga0209330_10004175	3300027619	Forest Soil	MFQSFLAWTAAWFVLGIAALAWTLLCGVVAHWGEKEGLAFWRTFGLCILLTPLAGALVVLTFKPPRTGRSMAQTASRG
Ga0209420_100007118	3300027648	Forest Soil	MLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLTFWKTFTLSFFLTPLAGALMVLSFKPPRTARSLAETTSRG
Ga0209007_100007658	3300027652	Forest Soil	MLHIFLVWFAAGLVLATIALSWIMLCVATAHWGEKEGLAFWKTFALSFFLTPLAGTLMVLSFKPPRAARSLAETASRG
Ga0209009_10167602	3300027667	Forest Soil	MVHIFLIWLAAALLLTTAALGWIMLCGATAQWGEKEGLPFKKTFALSLVLTPLAGALVVLAFKPSRTGRTLAHTASRG
Ga0209626_10362902	3300027684	Forest Soil	MLTTAALVWIMLCGVTAQWGEKEGLPFNKTFALCLALTPLAGALLILSFRPPRNARSLAETASRG
Ga0209655_100075124	3300027767	Bog Forest Soil	MFHVILIWLVGWLVLGIAAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0209655_100371452	3300027767	Bog Forest Soil	MISQVHFVWILGCLLLATAGLVWIMLCGVTAQWGEKEGLGFWKTFTLSFLLSPLAGLLVVVAFRSPRTGRSLAETASRG
Ga0209274_104842122	3300027853	Soil	MLHIFLIWFAAVLVLATAALAWIMVCGAIAQWAEKEGLTFWKTFTLSFFLTPLAGALMVLSFKPPRATRSLAETASRG
Ga0209006_100349663	3300027908	Forest Soil	MVHVFLIWFAAALVLTTAGLLWIMLCGVTAQWGEKEGLPFKKTFAPCLVLTPLAGALLILSFKPPRTARPLAETASRG
Ga0209006_100614513	3300027908	Forest Soil	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLSFKKTFALCLVLTPLAGALLILSFKPSRTARSLAETASRG
Ga0209006_100785223	3300027908	Forest Soil	MVHIFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLLLTPLAGALLILSFKPPRTARSLAETASRG
Ga0209006_101000133	3300027908	Forest Soil	MVHTFLVWFAAALVLTTTALVWIMLCGVTAQWGEKEGLPFKKTFALCLLLTPLAGALLILSFKPPRTARSLAETASRG
Ga0265354_10240642	3300028016	Rhizosphere	MVHTFLIWFAAALVLTTAALIWIMLCGVTAQWGEKEGLPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0302301_10394242	3300028731	Palsa	MFHVILIWMVGWLVLGIAAVGWTMLCGVTAHWGEKEGLSFWQTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG
Ga0302231_103118692	3300028775	Palsa	HVILIWMVGWLVLGIVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0302303_100949752	3300028776	Palsa	MFHVILIWMVGWLVLGIVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0302226_101967572	3300028801	Palsa	SSPERKRFNGHGGRGEQMISQVHFVWILGCLLLATAGLVWVMICGVTAQWGEKEGLAFWKTFTLSFLLSPLAGLLLVLAFRSPRTGRSLAETASRG
Ga0302230_101933051	3300028871	Palsa	TKAGFESPEGAWGKGMFHVILIWMVGWLVLGIVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0308309_100013858	3300028906	Soil	MLHSFLIWFAAVLVMGSAALIWVMLCGATAHWGEKEGLTFWKTFTLSFLLTPLAGALAVLAFKPSRTGRTLAHTASRG
Ga0308309_100083876	3300028906	Soil	MLHIFLVWLAAGLLLATVTLLWIMFCGATAHWGEKEGLAFWKTFALSFFLTPLAGALMVLSFKPPRATRSLAETASRG
Ga0311340_107590042	3300029943	Palsa	VGWLVLGLVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0302306_100219404	3300030043	Palsa	GRGKRMFHVILIWMVVWLALGIAAVAWTMLCGATAHWGEKEGLAFWQTFTLCLLLTPLAGALVVLAFKPPRSGRSLAETASRG
Ga0265762_10385091	3300030760	Soil	MVHIFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALSLALTPLAGALLILSFRPPRTARSLAETASRG
Ga0265753_10206642	3300030862	Soil	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGVPFKKTFALCLLLTPLAGALLILSFKPPRTTRSLAETASRG
Ga0265765_10573681	3300030879	Soil	GRKARIHLGDTMVHIFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGLPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0302325_126203762	3300031234	Palsa	RKAHGGKGMFHVILIWMVGWLVLGLVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0302324_1017206502	3300031236	Palsa	IWMVGWLVLGLVAVAWTMLCGATAHWAEKEGLAFWQTFALCLLLTPLAGALLVLAFRPPRTGRSLAETAGRG
Ga0310686_1012101342	3300031708	Soil	MVHTFLIWFAAALVLTTAALVWIMLCGVTAQWGEKEGVPFKKTFALCLVLTPLAGALLILSFKPPRTARSLAETASRG
Ga0310686_1028296626	3300031708	Soil	MLHIFLVWLAAGLVLATAALAWIMLCGATAHWAEKEGLTFWKTFTLSFFLTPLAGALMVLSFKPPRPARSLAETASRG
Ga0310686_1049160466	3300031708	Soil	MLHSFLIWFAAALLMGSAALIWIMLCGATAHWGEKEGLTFWKTFTLSFLLTPLAGALAVLAFKPSRTGRTLAHTASRG
Ga0310686_1061801145	3300031708	Soil	MISQLHFVWILGCLLLATAALVWIMICGVTAHWGEKEGLGFWKTFTLSFLLSPLAGMLVVLAFKPPRTGRSLAENASRG
Ga0310686_1120721902	3300031708	Soil	MGERMFQSLFVWMEGWLVLSIAALAWSMLCGVTAHWGEKEGLGFWRTFALCILLTPLAGALVVLAFK
Ga0310686_1173747241	3300031708	Soil	MHHVSFLSVVGWLVLSIAALVWTMLSGVTAHWGEKEGNAFWRTFALCMLLSPLAGALVVLAFKPPRTRRSLAETASRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097752

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences