Metagenome / Metatranscriptome Family F097768

Basic Information
Family ID	F097768
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	51 residues
Representative Sequence	LRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Number of Associated Samples	92
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	98.08 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (71.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (35.577 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.269 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.75% β-sheet: 0.00% Coil/Unstructured: 51.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00440	TetR_N	25.96
PF08327	AHSA1	10.58
PF07690	MFS_1	4.81
PF14534	DUF4440	1.92
PF07883	Cupin_2	0.96
PF13432	TPR_16	0.96
PF00583	Acetyltransf_1	0.96
PF13474	SnoaL_3	0.96
PF00999	Na_H_Exchanger	0.96
PF13398	Peptidase_M50B	0.96
PF07885	Ion_trans_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.96
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.96
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.96
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.96
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.81 %
Unclassified	root	N/A	28.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.88 %
Unclassified	root	N/A	28.85 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	47.12 %
Unclassified	root	N/A	28.85 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	0.96 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	7.69 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.73 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	5.77 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.85 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	2.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.92 %
unclassified Candidatus Melainabacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.96 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	7.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.73 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	5.77 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	2.88 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Candidatus Melainabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	0.96 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Sagittula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sagittula	0.96 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	7.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.73 %
Planosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium	5.77 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	2.88 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.92 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples	0.96 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.96 %
Sagittula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sagittula → Sagittula stellata	0.96 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Candidatus Melainabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	7.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.73 %
Planosporangium flavigriseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium flavigriseum	5.77 %
Jatrophihabitans telluris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	2.88 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.92 %
Sagittula stellata E-37	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sagittula → Sagittula stellata → Sagittula stellata E-37	0.96 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	0.96 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.96 %
Saccharothrix syringae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix syringae	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Candidatus Melainabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01AOVPH	Not Available	511	Open in IMG/M
2189573001\|GZR05M102J0SRQ	Not Available	522	Open in IMG/M
2199352024\|deeps__Contig_196957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	604	Open in IMG/M
3300005330\|Ga0070690_100377399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	1036	Open in IMG/M
3300005332\|Ga0066388_100599418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1724	Open in IMG/M
3300005341\|Ga0070691_10885239	Not Available	550	Open in IMG/M
3300005436\|Ga0070713_101633943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	625	Open in IMG/M
3300005436\|Ga0070713_102145189	Not Available	541	Open in IMG/M
3300005437\|Ga0070710_10824056	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005471\|Ga0070698_101493630	Not Available	627	Open in IMG/M
3300005541\|Ga0070733_10775971	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005547\|Ga0070693_101666897	Not Available	502	Open in IMG/M
3300005614\|Ga0068856_100991645	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005616\|Ga0068852_100351987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	1438	Open in IMG/M
3300005719\|Ga0068861_101532845	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005764\|Ga0066903_102266401	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005764\|Ga0066903_103068412	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300005841\|Ga0068863_101175861	Not Available	772	Open in IMG/M
3300005842\|Ga0068858_102440798	Not Available	517	Open in IMG/M
3300006028\|Ga0070717_10816451	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300006028\|Ga0070717_11937755	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006046\|Ga0066652_101462673	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300006175\|Ga0070712_101533463	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300006575\|Ga0074053_12010545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	1108	Open in IMG/M
3300006954\|Ga0079219_10227716	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300007076\|Ga0075435_100997993	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300009012\|Ga0066710_103230386	Not Available	625	Open in IMG/M
3300009098\|Ga0105245_12713374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium flavigriseum	548	Open in IMG/M
3300009545\|Ga0105237_11077024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300010159\|Ga0099796_10305357	Not Available	675	Open in IMG/M
3300010322\|Ga0134084_10463699	Not Available	507	Open in IMG/M
3300010325\|Ga0134064_10481174	Not Available	512	Open in IMG/M
3300010361\|Ga0126378_10572944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1243	Open in IMG/M
3300010371\|Ga0134125_11177051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300010371\|Ga0134125_11749820	Not Available	676	Open in IMG/M
3300012199\|Ga0137383_10906139	Not Available	644	Open in IMG/M
3300012210\|Ga0137378_10457519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300012349\|Ga0137387_10625068	Not Available	780	Open in IMG/M
3300012356\|Ga0137371_11414118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	509	Open in IMG/M
3300012944\|Ga0137410_11012252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix syringae	708	Open in IMG/M
3300012971\|Ga0126369_12338617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300012985\|Ga0164308_11351130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	649	Open in IMG/M
3300013105\|Ga0157369_10803123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	967	Open in IMG/M
3300013105\|Ga0157369_12379992	Not Available	536	Open in IMG/M
3300013307\|Ga0157372_11294290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300014968\|Ga0157379_10415500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1238	Open in IMG/M
3300015242\|Ga0137412_10485391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	947	Open in IMG/M
3300015372\|Ga0132256_101775860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300020082\|Ga0206353_10543974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	815	Open in IMG/M
3300021168\|Ga0210406_10933300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	651	Open in IMG/M
3300021432\|Ga0210384_10617095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300021479\|Ga0210410_10198985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1794	Open in IMG/M
3300021559\|Ga0210409_10321558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1392	Open in IMG/M
3300021560\|Ga0126371_12929298	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300024222\|Ga0247691_1043005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	685	Open in IMG/M
3300025321\|Ga0207656_10304577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → Jatrophihabitans telluris	789	Open in IMG/M
3300025914\|Ga0207671_10887358	Not Available	705	Open in IMG/M
3300025916\|Ga0207663_10219245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	1383	Open in IMG/M
3300025916\|Ga0207663_10905077	Not Available	706	Open in IMG/M
3300025926\|Ga0207659_10458516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	1074	Open in IMG/M
3300025927\|Ga0207687_10472535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium flavigriseum	1043	Open in IMG/M
3300025927\|Ga0207687_11702479	Not Available	540	Open in IMG/M
3300025928\|Ga0207700_10107303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2240	Open in IMG/M
3300025929\|Ga0207664_10220010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1646	Open in IMG/M
3300026023\|Ga0207677_10581030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	981	Open in IMG/M
3300026088\|Ga0207641_10942841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300026118\|Ga0207675_101145227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium flavigriseum	798	Open in IMG/M
3300026121\|Ga0207683_10978856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300026121\|Ga0207683_11272728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium flavigriseum	681	Open in IMG/M
3300026316\|Ga0209155_1209925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300027523\|Ga0208890_1004130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sagittula → Sagittula stellata → Sagittula stellata E-37	1680	Open in IMG/M
3300027765\|Ga0209073_10064549	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300028799\|Ga0307284_10149330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	901	Open in IMG/M
3300029636\|Ga0222749_10665343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300031543\|Ga0318516_10813257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300031572\|Ga0318515_10600757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300031713\|Ga0318496_10575269	Not Available	623	Open in IMG/M
3300031736\|Ga0318501_10303119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300031736\|Ga0318501_10555655	Not Available	628	Open in IMG/M
3300031744\|Ga0306918_10271432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300031777\|Ga0318543_10414603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300031779\|Ga0318566_10212742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	960	Open in IMG/M
3300031793\|Ga0318548_10557987	Not Available	558	Open in IMG/M
3300031846\|Ga0318512_10626096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300031846\|Ga0318512_10702376	Not Available	518	Open in IMG/M
3300031896\|Ga0318551_10759001	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031912\|Ga0306921_11025889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300031938\|Ga0308175_100411691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1415	Open in IMG/M
3300031946\|Ga0310910_10853019	Not Available	716	Open in IMG/M
3300032039\|Ga0318559_10359949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300032044\|Ga0318558_10500574	Not Available	606	Open in IMG/M
3300032067\|Ga0318524_10494746	Not Available	641	Open in IMG/M
3300032090\|Ga0318518_10378253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300032174\|Ga0307470_11014337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium flavigriseum	661	Open in IMG/M
3300032261\|Ga0306920_103110283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300032770\|Ga0335085_10019723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9656	Open in IMG/M
3300032805\|Ga0335078_12096065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300032829\|Ga0335070_12054110	Not Available	513	Open in IMG/M
3300033004\|Ga0335084_10916276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300033134\|Ga0335073_11543974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Planosporangium → Planosporangium flavigriseum	637	Open in IMG/M
3300033290\|Ga0318519_10702207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300033290\|Ga0318519_10714757	Not Available	613	Open in IMG/M
3300033290\|Ga0318519_10912106	Not Available	543	Open in IMG/M
3300033803\|Ga0314862_0138584	Not Available	584	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.88%
Host-Associated	Host-Associated	22.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.88%
Plants	Host-Associated → Plants	22.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.81%
Loam	Environmental → Terrestrial → Soil → Loam	17.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.77%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097768

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_1030360	2040502001	Soil	RRRNLRGRDAVVRLYQAWDPVVSELFDRYPFPKLMVPDPHHDWPASLRAICAAVRP
FD2_01309530	2189573001	Grass Soil	VRLYQAWEPVVGELYDRYPFPKLMVPDPQHDWPAAMRSIRAAIRP
deeps_03764380	2199352024	Soil	VGPPPRLRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPAAL
Ga0070690_1003773994	3300005330	Switchgrass Rhizosphere	AWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0066388_1005994181	3300005332	Tropical Forest Soil	YQAWEPVVSQLYDRYPFGKLMVPDPRHDWPAALQTIYAAVRP*
Ga0070691_108852393	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	DSPWARRRGLRGRDAVVGLYQAWEPVAVELFDRYPFGKLMLPDPQHDWPSALRAVRAAVRP*
Ga0070713_1016339433	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LYRAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0070713_1021451891	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	WARRRGLRGRDAVVGLYQAWEPVAVELFDRYPFGKLMLPDPQHDWPSALRAVRAAVRP*
Ga0070710_108240563	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RRGLRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0070698_1014936301	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	YQAWDPVVRELFDRYPFPKLMVPNPHHDWPGSLHAICTALRP*
Ga0070733_107759711	3300005541	Surface Soil	HDAVVRLYQAWEPVVTRLYRRYPFPKITVTDPQRDWPEALARICAAVRPSAANPS*
Ga0070693_1016668971	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	NLRGRDAVVRLYQAWDPVVSELFDRYPFPKLMVPDPHHDWPASLRAICAAVRP*
Ga0068856_1009916452	3300005614	Corn Rhizosphere	RRRGLRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0068852_1003519871	3300005616	Corn Rhizosphere	YRAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0068861_1015328451	3300005719	Switchgrass Rhizosphere	LRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0066903_1022664013	3300005764	Tropical Forest Soil	HRNLRGRDAVVRLYQAWEPVVSQLYGRYPFGKLMVPDPQHDWQAALRAICAAVRP*
Ga0066903_1030684122	3300005764	Tropical Forest Soil	AFVENSPWARRRNLRGRDAVVRLYQAWEPMVSQLYDRYPFGKLMVFDPRHDWPAALQTIYAAVRP*
Ga0068863_1011758612	3300005841	Switchgrass Rhizosphere	AFVQDSPWARRRDLRGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0068858_1024407982	3300005842	Switchgrass Rhizosphere	AWEPVAAELFDRYPFGKLMVPDPQHDWSSALRAIRAAVRP*
Ga0070717_108164511	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LRGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0070717_119377553	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0066652_1014626731	3300006046	Soil	PWARRRDLRGRDAVVGLYQAWEPVAAGLFDRYPFGKLMLPDPQHDWPAALRALRAAVRP*
Ga0070712_1015334633	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AFVQDSPWARRRDLRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRTAVRP*
Ga0074053_120105453	3300006575	Soil	VGLYQAWEPVAARLFDQYPFGKLMVPDPQHDWPATLRVIRAAVRP*
Ga0079219_102277162	3300006954	Agricultural Soil	VQDSPWARCRGLRGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0075435_1009979931	3300007076	Populus Rhizosphere	DAVVGLYQAWEPLAAELFDRYPFGKLMLSDPQHDWPAALRAVRAAVRP*
Ga0066710_1032303862	3300009012	Grasslands Soil	AVVQLYQAWEPVVSRLYDRYPFPKLMVPDPQHDWPAALRNICAAVRP
Ga0105245_127133743	3300009098	Miscanthus Rhizosphere	VGLYRAWEPVAVELFDRYPFGKLMLPDPQHDWPSALRAVRAAVRP*
Ga0105237_110770242	3300009545	Corn Rhizosphere	AWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0099796_103053571	3300010159	Vadose Zone Soil	DCLWARRRNLRGRDAVVQLYQAWEPVATRLYDRYPFPKLMVPDPQHDWPAALRAIRTAVRP*
Ga0134084_104636991	3300010322	Grasslands Soil	LHQAWEPVASQLYDRYPFGKLVVPDPHHDWPAALRTIRAAVRS*
Ga0134064_104811741	3300010325	Grasslands Soil	LRGRDAVVQLHQAWEPVASQLYDRYPFGKLVVPDPHHDWPAALRTIRAAVRS*
Ga0126378_105729442	3300010361	Tropical Forest Soil	VQLYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATLRVICAAVRP*
Ga0134125_111770511	3300010371	Terrestrial Soil	VGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0134125_117498201	3300010371	Terrestrial Soil	RRHGLRGRDAVVGLYQAWEPAAARLYDRYPFGKLMVPDPQHDWPAALRAIRTAVRP*
Ga0137383_109061392	3300012199	Vadose Zone Soil	AVVRLYQAWEPVVSELYIQYPFPKLMVRDPHHDWPASLHHICAAVRP*
Ga0137378_104575191	3300012210	Vadose Zone Soil	SRNVAFVENSRWARCRNLRGQDAVAQLYQAWEAVVSQLYGRYSFPKLLVTDPQDDWPAAMTRICAAVRP*
Ga0137387_106250682	3300012349	Vadose Zone Soil	LRGRDAVVRLYQAWEPMVSRLYDRYPFPKLMVPDPQHDWPAALRAICAAVRP*
Ga0137371_114141181	3300012356	Vadose Zone Soil	LRGRDAVVQLYQAWEPVVSRLYDRYPFPKLMVPDPQHDWPAALRNICAAVRP*
Ga0137410_110122522	3300012944	Vadose Zone Soil	VSELFDRYPFPKLMVPDPHHDWPASLRAICAAVRP*
Ga0126369_123386171	3300012971	Tropical Forest Soil	VVRLYQAWEPVVSQLYDRYPFGKLVVPDPQLNWPAALHTICAAARP*
Ga0164308_113511301	3300012985	Soil	AVIALYQAWEDVVNLLYDQYPFGKLMLTDPQHDWPAALTRIGAAVRP*
Ga0157369_108031232	3300013105	Corn Rhizosphere	RGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0157369_123799921	3300013105	Corn Rhizosphere	RDAVVRLYQAWNPVVSELFDRYPFPKLMVPDPHHDWPASLRAICAALRP*
Ga0157372_112942902	3300013307	Corn Rhizosphere	LYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP*
Ga0157379_104155004	3300014968	Switchgrass Rhizosphere	WEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0137412_104853912	3300015242	Vadose Zone Soil	VQDSPWARRRDLRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP*
Ga0132256_1017758601	3300015372	Arabidopsis Rhizosphere	VVSQLYDRYPFGKLMVPDPQHDWTAALLAIYAAVRP*
Ga0206353_105439741	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	RDLRGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Ga0210406_109333001	3300021168	Soil	LRGLDAVVRLYQAWEPVVGELYDRYPFPRLMVPDPHHDWPAALRAIRAAVRP
Ga0210384_106170951	3300021432	Soil	RNLRGRDAVIRLYQAWEPVASQLYDRYPFPKLMVPDPHHDWPAALHRICTAVRP
Ga0210410_101989853	3300021479	Soil	RRRNLRGRDAVVRLYQAWDPVVSELFDRYPFGKLMVPDPHHDWPASLRAICAAVRP
Ga0210409_103215581	3300021559	Soil	RGRDAVVRLYQAWDPVASELFDRYPFGKLMVPDPHHDWPASLRAICTAVRP
Ga0126371_129292981	3300021560	Tropical Forest Soil	QDAVVGLYRQWEAVVSQLYGRYPFPKLMLTDPQDDWPAALTRICAAVRP
Ga0247691_10430053	3300024222	Soil	AWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Ga0207656_103045773	3300025321	Corn Rhizosphere	WEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Ga0207671_108873581	3300025914	Corn Rhizosphere	RGLRGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP
Ga0207663_102192451	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	YQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Ga0207663_109050772	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RLYQAWDPVVSELFDRYPFPKLMVPDPHHDWPASLRAICAAVRP
Ga0207659_104585163	3300025926	Miscanthus Rhizosphere	AVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRTAVRP
Ga0207687_104725351	3300025927	Miscanthus Rhizosphere	RGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRTAVRP
Ga0207687_117024793	3300025927	Miscanthus Rhizosphere	AFVQDSPWARRRDLRGRAAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Ga0207700_101073033	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AVVRLYQAWYPVASELFDRYPFGKLMVPDPHHDWPASLRAICAAVRP
Ga0207664_102200101	3300025929	Agricultural Soil	GLRGRDAVVGLYQAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Ga0207677_105810304	3300026023	Miscanthus Rhizosphere	RRGLRGRDAVVGLYQAWEPVAVELFDRYPFGKLMLPDPQHDWPSALRAIRAAVRP
Ga0207641_109428411	3300026088	Switchgrass Rhizosphere	LRGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP
Ga0207675_1011452274	3300026118	Switchgrass Rhizosphere	DSPWARRRGLRGRDAVVGLYQAWEPVAVELFDRYPFGKLMLPDPQHDWPSALRAIRAAVR
Ga0207683_109788561	3300026121	Miscanthus Rhizosphere	RDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPHYDWPSALRAIRAAVRP
Ga0207683_112727283	3300026121	Miscanthus Rhizosphere	RDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVRP
Ga0209155_12099252	3300026316	Soil	LRGRDAVVRLYQAWDPVASELFDRYPFGKLMVPDPHHDWLASLRAICTAVRP
Ga0208890_10041302	3300027523	Soil	LYQAWEPVAARLFDQYPFGKLMVPDPQRDWPAALRAIRAAVRP
Ga0209073_100645491	3300027765	Agricultural Soil	LAFVQDSPWARRHGLRGRDAVVGLYQAWEPVAARLFDQYPFGKLMLPDPQHDWPAALQAIRTAIRP
Ga0307284_101493301	3300028799	Soil	VQDSPWARRRDLRGRDAVVGLYQAWEPVAVELFDRYPFGKLMVPDPQHDWPAALRAIRAAVRP
Ga0222749_106653431	3300029636	Soil	RNLRRRDAVIRLYQAWEPVATQLYDRYPFPKLMVPDPQHDWPAALPCPSAARRTIRSPVR
Ga0318516_108132571	3300031543	Soil	DAVVGLYQAWEPVAARLYDRYPFGKLMVPDPQQDWPAAVRRICAAVRP
Ga0318515_106007571	3300031572	Soil	PVAARLYDRYPFGKLMVPDPQQDWPAAVRRICAAVRP
Ga0318496_105752692	3300031713	Soil	AWEPVVSQLYLRYPFGKLMVPDPQLDWPAALQRICAAVRP
Ga0318501_103031192	3300031736	Soil	PWARHRNLRGRDAVVGLYQAWEPVAARLYDRYPFGKLMVPDPQQDWPAAVRRICAAVRP
Ga0318501_105556551	3300031736	Soil	RHRNLRGLDAVVQLYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0306918_102714321	3300031744	Soil	YQAWEPVAARLYDRYPFGKLMVPDPQQDWPAAVRRICAAVRP
Ga0318543_104146033	3300031777	Soil	VVQLYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0318566_102127422	3300031779	Soil	WARRRNLHGRTAVVRLYQAWEPVVSQLYLRYPFGKLMVPDPQLDWPAALQRICAAVRP
Ga0318548_105579873	3300031793	Soil	LYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0318512_106260961	3300031846	Soil	AWEPVAARLYDRYPFGKLMVPDPQQDWPAAVRRICAAVRP
Ga0318512_107023761	3300031846	Soil	YQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0318551_107590011	3300031896	Soil	VGLYRQWEAVVSQLYGRYPFSKLMLTDPQDDWPAALTRICAAVRP
Ga0306921_110258893	3300031912	Soil	PWARHRNLRGLDAVVQLYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0308175_1004116911	3300031938	Soil	EPVAAGLFDRYPFGKVMVPDPQHDWPAALRVIRAAVRP
Ga0310910_108530191	3300031946	Soil	AWEPVAARLYDRYRFGKLMVPDPQHDWPAALRRICATVRP
Ga0318559_103599493	3300032039	Soil	SPRNLAFVEDSPWARHRNLRGLDAVVQLYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0318558_105005743	3300032044	Soil	RTLRGLDAVVQLYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0318524_104947461	3300032067	Soil	SPWARHRNLRGLDAVVQLYQAWEPVVSQLYDGYPFPKLTVPDPHHDWPATVRVICAAVRP
Ga0318518_103782532	3300032090	Soil	QAWEPVVSQLYLRYPFGKLMVPDPQLDWPAALQRICAAVRP
Ga0307470_110143371	3300032174	Hardwood Forest Soil	DSPWARRRGLRGRDAVVGLYRAWEPVAAELFDRYPFGKLMVPDPQHDWPSALRAIRAAVR
Ga0306920_1031102832	3300032261	Soil	WARHRNLRGRDAVVGLYQAWEPVAARLYDRYPFGKLMVPDPQQDWPAAVRRICAAVRP
Ga0335085_1001972312	3300032770	Soil	RDAVIRLYQAWEPVVSQLYDRYPFGKLIVPDPQRDWPAALQTIYAAVRP
Ga0335078_120960652	3300032805	Soil	QLYQAWEPVAVRLYRQYPFPKLMVPDPQRDWPTALRNICAAVRP
Ga0335070_120541102	3300032829	Soil	LRGRDAVVRLYQAWEPVVSQLYRRYPFGKLMVPDPQRDWPSALRTICAAVRP
Ga0335084_109162762	3300033004	Soil	RGRDAVIRLYQAWEPVVSQLYDRYPFGKLIVPDPQRDWPAALQTIYAAVRP
Ga0335073_115439742	3300033134	Soil	DSPWARRHGLRGRDAVVGLYQAWEPVAAGLFDRYPFGKLMVPDPQHDWPSALRAVRAAVR
Ga0318519_107022072	3300033290	Soil	GRDAVVGLYQAWEPVAARLYDRYPFGKLMVPDPQQDWPAAVRRICAAVRP
Ga0318519_107147572	3300033290	Soil	AVVRLYQAWEPVVSQLYERYPFGKLMVPDPRHDWPAALQTIYAAVRP
Ga0318519_109121061	3300033290	Soil	RNLRGREAVVRLYQAWEPVAGELYDRYLFPKLMVPDPQLDWPSALQAICAAVRP
Ga0314862_0138584_19_210	3300033803	Peatland	VENSPWARRRNLRGREAVIRLYQAWEPVASELYDRYPFAKLMVPDPRHDWPAALRAICAAVRP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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