NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F097834

Metagenome Family F097834

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097834
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 121 residues
Representative Sequence MHSPREALQAVLDAGALIYSVDMGKGQTSGSMFLRRVSEATGGRYFAVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYYYEPSGH
Number of Associated Samples 83
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.84 %
% of genes near scaffold ends (potentially truncated) 88.46 %
% of genes from short scaffolds (< 2000 bps) 86.54 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.269 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(28.846 % of family members)
Environment Ontology (ENVO) Unclassified
(70.192 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(60.577 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.58%    β-sheet: 16.90%    Coil/Unstructured: 53.52%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF01820Dala_Dala_lig_N 10.58
PF07478Dala_Dala_lig_C 7.69
PF00266Aminotran_5 3.85
PF01649Ribosomal_S20p 2.88
PF13519VWA_2 1.92
PF13290CHB_HEX_C_1 0.96
PF13414TPR_11 0.96
PF13557Phenol_MetA_deg 0.96
PF09286Pro-kuma_activ 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG1181D-alanine-D-alanine ligase or related ATP-grasp enzymeCell wall/membrane/envelope biogenesis [M] 10.58
COG0268Ribosomal protein S20Translation, ribosomal structure and biogenesis [J] 2.88
COG4934Serine protease, subtilase familyPosttranslational modification, protein turnover, chaperones [O] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.27 %
UnclassifiedrootN/A6.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004092|Ga0062389_102105727All Organisms → cellular organisms → Bacteria → Acidobacteria739Open in IMG/M
3300005471|Ga0070698_100970796All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300005995|Ga0066790_10522710All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300006052|Ga0075029_100014598All Organisms → cellular organisms → Bacteria4357Open in IMG/M
3300006052|Ga0075029_100058049All Organisms → cellular organisms → Bacteria → Acidobacteria2252Open in IMG/M
3300006052|Ga0075029_100058326All Organisms → cellular organisms → Bacteria → Acidobacteria2247Open in IMG/M
3300006102|Ga0075015_100119789All Organisms → cellular organisms → Bacteria → Acidobacteria1341Open in IMG/M
3300006162|Ga0075030_100421326All Organisms → cellular organisms → Bacteria → Acidobacteria1063Open in IMG/M
3300006174|Ga0075014_100877093All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300006354|Ga0075021_10159961All Organisms → cellular organisms → Bacteria → Acidobacteria1364Open in IMG/M
3300006640|Ga0075527_10146503All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300009518|Ga0116128_1169597All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300009519|Ga0116108_1166929All Organisms → cellular organisms → Bacteria → Acidobacteria651Open in IMG/M
3300009524|Ga0116225_1228803All Organisms → cellular organisms → Bacteria → Acidobacteria837Open in IMG/M
3300009525|Ga0116220_10598189All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300009525|Ga0116220_10617172All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300009552|Ga0116138_1045041All Organisms → cellular organisms → Bacteria → Acidobacteria1278Open in IMG/M
3300009552|Ga0116138_1114785All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300009623|Ga0116133_1024197All Organisms → cellular organisms → Bacteria → Acidobacteria1501Open in IMG/M
3300009624|Ga0116105_1116610All Organisms → cellular organisms → Bacteria → Acidobacteria682Open in IMG/M
3300009631|Ga0116115_1185738Not Available525Open in IMG/M
3300009632|Ga0116102_1006188All Organisms → cellular organisms → Bacteria4547Open in IMG/M
3300009634|Ga0116124_1070004All Organisms → cellular organisms → Bacteria → Acidobacteria1011Open in IMG/M
3300009634|Ga0116124_1240320All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300009643|Ga0116110_1077223All Organisms → cellular organisms → Bacteria → Acidobacteria1155Open in IMG/M
3300009645|Ga0116106_1186240All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300009646|Ga0116132_1256212Not Available532Open in IMG/M
3300009646|Ga0116132_1275712All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300009672|Ga0116215_1011310All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4337Open in IMG/M
3300009683|Ga0116224_10142976All Organisms → cellular organisms → Bacteria → Acidobacteria1153Open in IMG/M
3300009700|Ga0116217_10856777All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300009700|Ga0116217_10911677All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300009762|Ga0116130_1047862All Organisms → cellular organisms → Bacteria → Acidobacteria1358Open in IMG/M
3300009764|Ga0116134_1189309All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300009839|Ga0116223_10086387All Organisms → cellular organisms → Bacteria → Acidobacteria1999Open in IMG/M
3300009839|Ga0116223_10246798All Organisms → cellular organisms → Bacteria → Acidobacteria1078Open in IMG/M
3300009839|Ga0116223_10448716Not Available755Open in IMG/M
3300010339|Ga0074046_10544181All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300010341|Ga0074045_10397062All Organisms → cellular organisms → Bacteria → Acidobacteria894Open in IMG/M
3300010343|Ga0074044_10987778All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300010379|Ga0136449_103867305All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300014156|Ga0181518_10383724All Organisms → cellular organisms → Bacteria → Acidobacteria682Open in IMG/M
3300014165|Ga0181523_10285674All Organisms → cellular organisms → Bacteria → Acidobacteria934Open in IMG/M
3300014200|Ga0181526_10648869All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300014502|Ga0182021_10796064All Organisms → cellular organisms → Bacteria → Acidobacteria1135Open in IMG/M
3300017822|Ga0187802_10009999All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3043Open in IMG/M
3300017925|Ga0187856_1318521Not Available532Open in IMG/M
3300017933|Ga0187801_10142203All Organisms → cellular organisms → Bacteria → Acidobacteria931Open in IMG/M
3300017934|Ga0187803_10370451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300017940|Ga0187853_10180234All Organisms → cellular organisms → Bacteria → Acidobacteria998Open in IMG/M
3300017940|Ga0187853_10273706All Organisms → cellular organisms → Bacteria → Acidobacteria769Open in IMG/M
3300017941|Ga0187850_10164790All Organisms → cellular organisms → Bacteria → Acidobacteria1032Open in IMG/M
3300017946|Ga0187879_10377170All Organisms → cellular organisms → Bacteria → Acidobacteria786Open in IMG/M
3300017975|Ga0187782_10345607All Organisms → cellular organisms → Bacteria → Acidobacteria1126Open in IMG/M
3300017995|Ga0187816_10103394All Organisms → cellular organisms → Bacteria → Acidobacteria1223Open in IMG/M
3300018002|Ga0187868_1218505All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300018003|Ga0187876_1166867All Organisms → cellular organisms → Bacteria → Acidobacteria758Open in IMG/M
3300018005|Ga0187878_1228812All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300018006|Ga0187804_10154742All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300018006|Ga0187804_10465647All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300018008|Ga0187888_1260274All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300018009|Ga0187884_10257862All Organisms → cellular organisms → Bacteria → Acidobacteria709Open in IMG/M
3300018012|Ga0187810_10094283All Organisms → cellular organisms → Bacteria → Acidobacteria1170Open in IMG/M
3300018012|Ga0187810_10429961All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300018013|Ga0187873_1317865Not Available570Open in IMG/M
3300018016|Ga0187880_1146979All Organisms → cellular organisms → Bacteria → Acidobacteria1111Open in IMG/M
3300018017|Ga0187872_10009988All Organisms → cellular organisms → Bacteria → Acidobacteria6008Open in IMG/M
3300018018|Ga0187886_1187770All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium803Open in IMG/M
3300018018|Ga0187886_1208772All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300018020|Ga0187861_10193979All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300018022|Ga0187864_10456624All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300018025|Ga0187885_10303197All Organisms → cellular organisms → Bacteria → Acidobacteria723Open in IMG/M
3300018030|Ga0187869_10619663All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300018035|Ga0187875_10013501All Organisms → cellular organisms → Bacteria → Acidobacteria5078Open in IMG/M
3300018035|Ga0187875_10083017All Organisms → cellular organisms → Bacteria → Acidobacteria1836Open in IMG/M
3300018035|Ga0187875_10511572All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300018037|Ga0187883_10197453All Organisms → cellular organisms → Bacteria → Acidobacteria1032Open in IMG/M
3300018042|Ga0187871_10296636All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300018042|Ga0187871_10320410All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300018042|Ga0187871_10382640All Organisms → cellular organisms → Bacteria → Acidobacteria777Open in IMG/M
3300018043|Ga0187887_10054225All Organisms → cellular organisms → Bacteria → Acidobacteria2459Open in IMG/M
3300018043|Ga0187887_10714955All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300018044|Ga0187890_10100675All Organisms → cellular organisms → Bacteria → Acidobacteria1681Open in IMG/M
3300018086|Ga0187769_10234058All Organisms → cellular organisms → Bacteria → Acidobacteria1364Open in IMG/M
3300019082|Ga0187852_1345752All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300023090|Ga0224558_1046223All Organisms → cellular organisms → Bacteria → Acidobacteria1817Open in IMG/M
3300023091|Ga0224559_1176564All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300025454|Ga0208039_1015936All Organisms → cellular organisms → Bacteria → Acidobacteria1667Open in IMG/M
3300025553|Ga0208080_1073453All Organisms → cellular organisms → Bacteria → Acidobacteria780Open in IMG/M
3300025604|Ga0207930_1112968All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300025612|Ga0208691_1067897All Organisms → cellular organisms → Bacteria → Acidobacteria805Open in IMG/M
3300025854|Ga0209176_10114844All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300026294|Ga0209839_10277030All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300027645|Ga0209117_1080348All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300027854|Ga0209517_10088547All Organisms → cellular organisms → Bacteria → Acidobacteria2122Open in IMG/M
3300027911|Ga0209698_10117766All Organisms → cellular organisms → Bacteria → Acidobacteria2205Open in IMG/M
3300027911|Ga0209698_10460211All Organisms → cellular organisms → Bacteria → Acidobacteria988Open in IMG/M
3300027911|Ga0209698_10635359All Organisms → cellular organisms → Bacteria → Acidobacteria817Open in IMG/M
3300029817|Ga0247275_1179566All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300030011|Ga0302270_10393529All Organisms → cellular organisms → Bacteria → Acidobacteria740Open in IMG/M
3300030580|Ga0311355_10396856All Organisms → cellular organisms → Bacteria → Acidobacteria1352Open in IMG/M
3300033004|Ga0335084_10091544All Organisms → cellular organisms → Bacteria3156Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland28.85%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland18.27%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil11.54%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds9.62%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment7.69%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.85%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.85%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil2.88%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.92%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.92%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.96%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.96%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006640Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11BEnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009634Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009646Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018002Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40EnvironmentalOpen in IMG/M
3300018003Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018018Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150EnvironmentalOpen in IMG/M
3300018020Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018030Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300023090Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24EnvironmentalOpen in IMG/M
3300023091Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34EnvironmentalOpen in IMG/M
3300025454Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025553Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025854Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300029817Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25EnvironmentalOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062389_10210572713300004092Bog Forest SoilGALIYSVDMGKSENQSSHQPFGNQVSGSMFLRRVSEATGGRYFSFSRGPSGQNSAAEVLNAVLDDLRASYIVTYDPPSREAGFHSLRLLPTHNLNLTFHSRNGYDYAPGVR*
Ga0070698_10097079613300005471Corn, Switchgrass And Miscanthus RhizosphereREALEAVLEEGALIYSVDMGTSENQTSGSTFLRQASDATGGRYFSLRFSPQDGAAAILNAVLEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLRFHSRNGYNYEHSVR*
Ga0066790_1052271013300005995SoilFSDGYDTISLHSAGEALQAAQDAGALIYSVDMGRADTGKAENSSRGSGFLRQVSDATGGRYFSLSPRFSQQDTAQVLNAVLGDLRASYVVTYDLPSQEAGFHSLRLLPTHNLNLTFHNRNGYDYEPSGQ*
Ga0075029_10001459813300006052WatershedsEALQAAWGEGALIYSVDTGKSENPSSNQASGSNFLRNVSEATGGRYLSLSGGVNRKDGASGVLNAVLEDLRASYVVTYDLPSHEAGFHSLRLLPTHNLNLTFHSRTGYDYEPGVR*
Ga0075029_10005804913300006052WatershedsLQAVLDEGALVYSVDMGKSENQSSSQILENQASGSTFLRRVSQATGGRYFSSPRGSQQNGAAAVLNAVLEDLRASYVVTYPLPSHEAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0075029_10005832613300006052WatershedsLQAVLDEGALVYSVDMGKSENQSSSQILENQASGSTFLRRVSQATGGRYFSSPRGSQQNGAAAVLNTVLEDLRASYVVTYALPSHEPGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0075015_10011978913300006102WatershedsLVYSVDMGKSENQSSSQILENQASGSTFLRRVSQATGGRYFSSPRGSQQNGAAAVLNTVLEDLRASYVVTYALPSHEPGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0075030_10042132613300006162WatershedsPAVFCSSGCRVSDSMSKLLAVKSGGATPLFDGLVFAADFISQHRRSVDHSNVRPVLILFSDGYDTISLHSAREALQAVLDEGALIYCVDMGKSENQSPTQPWGNQTSGNQAPGSAFLRQVSEATGGRYFSVPRGNSRQNGAAAVLNAVLEDLRASYVVTYNLPSHEAGFHSLRLLPTHNLNLTFHSRNGYEYEPSSR*
Ga0075014_10087709313300006174WatershedsSVDMGKSENQSSSQILENQASGSTFLRRVSQATGGRYFSSPRGSQQNGAAAVLNTVLEDLRASYVVTYALPSHEPGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0075021_1015996113300006354WatershedsNDTISLHSPRDAFQSVLASGAVLYSVDMGQSTNASAGSRSLHQLSDATGGRYFSLGSSPQDNAAAVLTAVLEDLRASYVVTYDPPSRQAGFHSLRLLPTHNLNFTFRSRNGYYYAPEVR*
Ga0075527_1014650313300006640Arctic Peat SoilSAREALDTVVAGGALVYSVDTGKPANPSAGSMFLRQVSDATGGRYFSLQDGVANVMSAVLEDLRASYVVTYDLPSQQAGFHSLRLMPTHNVNLRFHSRNRYYDEPSLR*
Ga0116128_116959723300009518PeatlandIYSVDMGTPENRSSNQASNETMGSMFLRQVSDATGGRYFSLRSAHQDGAATVLNAVLEDLRASYVVTYDLPSHQTGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0116128_120317813300009518PeatlandMSKLLAMKSGGTTPLFDALIFAADFISQHRHAGGRGDARPVLILFSDGYDTISLHSAREALQAVLDEGALIYSVDMGKDQTSGTMFPRRVSEATGGRYFAFSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLHLTFHSRNGYDYEPSGH*
Ga0116108_116692923300009519PeatlandVRRCAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHNRTGYNYEPSGH*
Ga0116225_122880313300009524Peatlands SoilDAVVTGGALIYSVDTGKPADPSAGGMFLRQVSDASGGRYFALQDGVANVMSAVLEDLRASYVVTYDLPSHQAGFHSLRLMPTHNVNLRFHSRNRYYDEPSLR*
Ga0116220_1059818913300009525Peatlands SoilADFISQHRRAGVRPVMILFSDGDDTVSMHSPREALQAVLDAGALIYSVDMGKGQTSGSMFLRRVSEATGGRYFAVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDYEPGIR*
Ga0116220_1061717223300009525Peatlands SoilVLHEGALIYSLDLGTSENQPSDQTAGSMFLRWVSDATGGRYFSLRFSPNDGAATVLNTVLEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLTFHSRN
Ga0116138_104504113300009552PeatlandLHSARDALQAVLDGGALIYSVDIGTSESQSSGSMFLRQVSEATGGRYFSLGDGAATVLNAVLEDLRASYVVTYDLPSQQAGFHSLRLLPTHNLNLKFHSRNGYDYEPSGH*
Ga0116138_111478523300009552PeatlandLFSDGNDTISWHSPRQALEAVLDEGVLIYSVDMGTPENRSSNQASNETMGSMFLRQVSDATGGRYFSLRSAHQDGAATVLNAVLEDLRASYVVTYDLPSHQTGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0116133_102419713300009623PeatlandAADFISHHRRAGVRPVMILFSDGDDTISMHSPREALQAVLDEGAPIYSVDMGKDQTSGTLFLRQASDATGGRYFSARFSQHEGVATVLNAVLEDLRASYVVTYDLPSRHTGFHSLRLLPTRNLNLTFHSRNGYDYEPSGH*
Ga0116105_111661013300009624PeatlandGILRVAHIHGIDQGDRGAGRSEVRPVLLLFSDGCDTFSLHSAREAVQAALDAGALIYSVDMGNAQNPTAGSIFLRQVSSATGGRYFPLRTQHAPPEDSAAVLTAVLDDLRASYVVTYDLPSHQAGFHSLRLMPTHNLNLTFHSRGGYNYDPSDR*
Ga0116115_118573823300009631PeatlandLEAMQAAGALIYSVDLGTTENQSSDHTPNQNKGSIFLQQLSEATGGRYFFFSPRFSKSDGAATVLNAVLDDLRASYVVTYDVPSHQVGFHSLRLFPTHKLNLTFHSRNGYNYEPGGY*
Ga0116102_100618843300009632PeatlandVRRCAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0116124_107000423300009634PeatlandVRRCAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSLRFSQHDSAATVLDAVLEDLRASYVVTYDLPSRQAGFHSLRLLPTHNLNLTFHSRNGYEYEPGGHLMGDR*
Ga0116124_124032013300009634PeatlandGTTPLFDALIFAADFISHHRRAGARPVMILFSDGDDTISMHSPREALQAVLDDGALIYSVDMGKGQTSGTMFLRRVSQATGGRYFAYSLRPFQQDSAATVLNAVLEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLTFHSRNGYEYEPSGQ*
Ga0116110_107722313300009643PeatlandILFSDGNDTISLHSAGNALEAVLDGGALIYSVDIGTPRNPSSGSMFLRRVSEATGGRYFSLRDGAATVLNAVLEDLRASYVVTYALPSHQDGFHSLRLLPTHNLNLTFHSRNGYFYERSVR*
Ga0116106_118624023300009645PeatlandDDTISMHSPREALQAVLDEGALIYSVDMGKGQTSGTMFLRRVSQATGGRYFAYSLRPFQQDSAATVLNAVLEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0116132_125621213300009646PeatlandSWHSPRQALEAVLDEGVLIYSVDMGTPENRSSNQASNETMGSMFLRQVSDATGGRYFSLRSAHQDGAATVLNAVLEDLRASYVVTYDLPSHQTGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0116132_127571213300009646PeatlandLQAVLGAGALIYSVDMGARENQTRGSMFLRRVSEATGGRYFSLRFSQHDSAATVLDAVLEDLRASYVVTYDLPSRQAGFHSLRLLPTHNLNLTFHSRNGYEYEPGGHLMGDR*
Ga0116215_101131013300009672Peatlands SoilMHSPREALQAVLDAGALIYSVDMGKGQTSGSMFLRRVSEATGGRYFAVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYYYEPSGH*
Ga0116224_1014297613300009683Peatlands SoilISLHSPREALEAVVAGAALVYSVDMLTSEIQTSGSTFLRQVSDATGGRYFSLRFSQQDGAATVLNAVLEDLRASYVVAYDLPSHQAGFHALRLLPTHNLNLKFHSRNGYYYEPSGH*
Ga0116217_1085677723300009700Peatlands SoilMILFSDGDDTVSMHSPREALQAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFAFSLRPSQQDGAAAVLNAVLEDLSASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRTGYDYEPSGH*
Ga0116217_1091167723300009700Peatlands SoilMILFSDGDDTVSMHSPREALQAVLDAGALIYSVDMGKGQTSGSMFLRRVSEATGGRYFAVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYYYEPSGH*
Ga0116130_104786223300009762PeatlandVRRCAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYLYERSLP*
Ga0116134_118930913300009764PeatlandVHDAGAPIYSIDMGTADIGISSSELPGSMFLRQVSEATGGRYFSPACFQRFSRKDGAATVLNTVLDDLRASYVVTYALPSHHAGFHSLRLLPTHNLNLTFRSRNGYYYEPSGY*
Ga0116223_1008638733300009839Peatlands SoilVKSGGTTPLFDALIFASEFISHHRRAGARPVLILFSDGNDTISLHSAREALDAVVTGGALIYSVDTGKPADPSAGGMFLRQVSDASGGRYFALQDGVANVMSAVLEDLRASYVVTYDLPSHQAGFHSLRLMPTHNVNLRFHSRNRYYDEPSLR*
Ga0116223_1024679833300009839Peatlands SoilSLHSPREALEAVLDGGALIYSVDMGTSENQTSGSTFLRQASDATGGRYFSLRFSQQHGAAAVLNAVLEDLRASYVVAYDLPRHQDGFHALRLLPTHNLNLKFHSRNGYYYEPSGH*
Ga0116223_1044871613300009839Peatlands SoilMILFSDGDDTISLHSPREALQAVLDAGALIYSVDMGKGQTSGTMFLRRVSEATGGRYFAFSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPNYQAGFHSLRL
Ga0074046_1054418123300010339Bog Forest SoilILFSDGNDTISMHSPREALAAVLDEGALIYSVDMGTSGNQSSNQASNETTGSMFLRRVSDATGGRYFSLRFPRQDGAATVLNAVLEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGR*
Ga0074045_1039706213300010341Bog Forest SoilGGTTPLFDALIFGADFIAQHRRAGVRPVLILFSDDYDTISLHSAPEALQAVLDEGALIYSVDMGKSGNQSSNQGSGSMFLRRVSDATGGRYFSFSVGSSRQDDDAAVLNAVLEDLHASYVVTYDLPSHEAGFHSLRLLPTHNLNLTFHSRNGYYYEPNGR*
Ga0074044_1098777823300010343Bog Forest SoilIYAVDMGQSENRSAGSAFLRQVSGATGGRYFPLSARSSEQGAAAVLNAALEDLRASYVVTYDVPSHQAGFHSLRLLPTHNLNLTFHGRNGYNYDPRSIIEDR*
Ga0136449_10386730513300010379Peatlands SoilVRPVMILFSDGDDTVSMHSPREALQAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFAFSLRPSQQDGAAAVLNAVLEDLSASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRTGYDYEPSGH*
Ga0181518_1038372413300014156BogDGDDTISMHSPREALQAVLDEGALIYSVDIGKDQTAGTMFLRQASDATGGRYFSARFWHHEGAVTLLNAALEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH*
Ga0181538_1039303723300014162BogIFAADFISQRCHLSGRHDVRSVLILFSDGYDTISLHSAREALQAVLDEGALIYSVDTGKPDIQSSNQVSSNQATSNQASGSMFLRRVSEATGGRYFPYSPDPSRQDGTSAVLNAVLEDLRASYVVTYNPPTHEAGLHSLRLLPTHNLNLTFHSRNVYDYESGDH*
Ga0181523_1028567413300014165BogGALIYSVDTGTSANQASYHASNQTSGSTFLRQVSQATGGRYFSFTLRSSQQGGAAAVLDAVLEDLRASYVVTYDLPNHHDGFHALRLLPTHNLNLTFHSRNGYLYERSRP*
Ga0181526_1064886923300014200BogAREAVQAVLGEGALVYAVDMETSATAGSAFLWHLSEATGGRYFALRSQQNDAVTVLNAALEDLRASYVVTYELPSHEAGFHSLRLLPTHNLNLTFHSRNGYYYEPSAQ*
Ga0182021_1079606423300014502FenVLILFSDGIDTISLHSEREAQNAVLDGGALIYAVDIGASAHQTSGSTFLRQVSEATGGRYFSFSPRSSQPDDAATVLNAVLEDLRASYVVSYDLPSHQTGFHSLRLLPTHNLNLKFHSRNGYYYEPSGH*
Ga0187802_1000999913300017822Freshwater SedimentPREALQAVMDQGALIYSVDMGRPGNQTSGSVFLRRASQAAGGRYFSLRSPHQDGAATVLNAVLDDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGSLMGDH
Ga0187856_131852113300017925PeatlandALIFGADFISHHRRAGARPVIILFSDGNDTITLHSAGNALEAVLDEGAPIYSVDMGKDQTSGTLFLRQASDATGGRYFSARFSQHEGVATVLNAVLEDLRASYVVTYDLPSRHTGFHSLFAFCRLTTSTSHSIAETATTTNPAVTDGRPMIGDL
Ga0187801_1014220313300017933Freshwater SedimentDGNDTISLHSAREALEVVAGGALIYSVDMVKPDMVKPANPPAGSMFLRQVSDSSGGRYFPLQDGDVMNTVLEDLRASYVVTYDLPSQQAGFHSLRLMPTHNVNLRFHSRNRYYDEPSLR
Ga0187803_1037045123300017934Freshwater SedimentDGDDTISMHSPREALQAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSLRFSPNVDAATVLNAALEDLRASYVVTYDLPSHEVGFHSLCLMPTRNLNLTFHSRNGYYYEPSVR
Ga0187853_1018023413300017940PeatlandVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSLRFSQHDSAATVLDAVLEDLRASYVVTYDLPSRQAGFHSLRLLPTHNLNLTFHSRNGYEYEPGGHLMGDR
Ga0187853_1027370613300017940PeatlandQAAQDSGALIYSVDMGAAGGQTSPQTAGGAVLRQLSEATGGRYFSPRFSLNGGAASLLNTVLEDLRASYVVTYDLPSHRTGFHSLRVMPTHNLNLTFHSRNGYNYEPGGD
Ga0187850_1016479023300017941PeatlandLIYSVDMGKPENQSSNEPWGNQASGSMFLRRVSDATGGRYFFFSLGSSRPDGAASVLNAVIEDLRASYVVTYDLPSHQPGFHSLRLLPTHNLKLTFHSRTGYDYEPSGH
Ga0187879_1037717013300017946PeatlandSARDALQAVLDSGALIYSVDTGTSANQASYHASNQTSGSTFLRQVSQATGGRYFSFTLRSSQQGGAAAVLDAVLEDLRASYVVTYDLPNHHDGFHALRLLPTHNLNLTFHSRNGYLYERSRP
Ga0187782_1034560723300017975Tropical PeatlandGDDTISMHSPREALQAVLDGGALIYSVDMGKDQTSGTTFLRRVSEATGGRYFSLRSPHQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGQ
Ga0187816_1010339433300017995Freshwater SedimentPVLILFSDGNDTISLHSAREALDAVVAGGALIYSVDMVKPDMVKPANPPAGSMFLRQVSDSSGGRYFPLQDGDVMNTVLEDLRASYVVTYDLPSQQAGFHSLRLMPTHNVNLRFHSRNRYYDEPSLR
Ga0187868_121850523300018002PeatlandVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFAFSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0187876_116686723300018003PeatlandVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0187878_122881213300018005PeatlandIFGADFISHHRRAGARPVLILFSDGNDTISWHSPRQALEAVLDEGVLIYSVDMGTPENRSSNQASNETMGSMFLRQVSDATGGRYFSLRSAHQDGAATVLNAVLEDLRASYVVTYDLPSHQTGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0187804_1015474223300018006Freshwater SedimentRPVLILFSDGNDTISLHSAREALDAVVAGGALIYSVDMVKPDMVKPANPPAGSMFLRQVSDSSGGRYFPLQDGDVMNTVLEDLRASYVVTYDLPSQQAGFHSLRLMPTHNVNLRFHSRNRYYDEPSLR
Ga0187804_1046564723300018006Freshwater SedimentDDTISLHSAREALQAVLDQGALIYSVDMGKPENLSSNQASGAIFLRRVSEATGGRYFSFSHGSSRQGAAAAVLSDVLEDLRASYVVTYDLPSHEAGFHSVRLLPTHNLNLTFHSRSGYDYEPGDR
Ga0187888_126027423300018008PeatlandEALRAAQGAGTMIYAVDLGSSLTSGGKFLQRVADGTGGRYFSPRFSGNQGAAALLNTVFEDLRASYVVTYDLPSHQAGFHALRLLPTHNLNLTFHSRGGYNYEPSDR
Ga0187884_1025786213300018009PeatlandFDALIFAADFISHHRRAGVRPVMILFSDGDDTISMHSPREALQAVLDEGALIYSVDIGKDQTAGTMFLRQASDATGGRYFSARFWHHEGAVTLLNAALEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0187810_1009428313300018012Freshwater SedimentISLHSSREALEAALDGGVLIYSVDMGTSGNQTSGSAFLRQVSEATGGRYFSPRFSKNDGAATVLNAVLEDLRASYVVTYDLPSHQAGSHSLRLLPTHNLNLTFHSRNSYYYEPSGH
Ga0187810_1042996123300018012Freshwater SedimentAEGALIYSVDIGTPEKSSAGSVFLRQASDATGGRYFSARFSPREDASTLLNAVLEDLRASYVVTYDPPSHQAGFHSLRLLPTHNLNLTFHSRNGYYREPSVR
Ga0187873_131786513300018013PeatlandLFDALIFTADFIAQHRRAGARPVLILFSDGDDTISLHSARDALQAVLDSGALIYSVDTGTSANQASYHASNQTSGSTFLRQVSQATGGRYFSFTLRSSQQGGAAAVLDAVLEDLRASYVVTYDLPNHHDGFHALRLLPTHNLNLTFHSRNGYLYERSRP
Ga0187880_114697933300018016PeatlandYSVDTGTSANQASYRTAGSAFLRRVSEATGGRYFTFSPRSSQQDGAAAVLDAVLQDLRASYVVTYDLPNHHDGFHALRLLPTHNLNLTFHSRNGYLYERSLP
Ga0187872_1000998853300018017PeatlandVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDY
Ga0187886_118777013300018018PeatlandTISIHSAGEALEAMQAAGALIYSVDLGTTENQSSDHTPNQNKGSIFLQQLSEATGGRYFFFSPRFSKSDGAATVLNAVLDDLRASYVVTYDVPSHQVGFHSLRLFPTHKLNLTFHSRNGYNYEPGGY
Ga0187886_120877213300018018PeatlandLEAVLDAGALIYSVDMETSKNQASYQTSGSAFLRQVSEATGGRYFSLSSSLRSSQQDGAATVLNAMLEDLRASYLVTYALPSHQAGFHSLRLLPTHNLNLRFHSRNGYYYEPSVR
Ga0187861_1019397913300018020PeatlandVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRPSQQDGAATVLNAVLEDLRPSYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSG
Ga0187864_1045662413300018022PeatlandREALQAVLDAGALIYSVDMGKGQTLGSMFLRRVSEATGGRYFAFALRPSQQDGAATVLNAVLEDLHASYVVTYDLPSYQAGLHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0187885_1030319713300018025PeatlandVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRLSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYEYEPS
Ga0187869_1061966313300018030PeatlandARPVMILFSDGDDTISMHSPREALQAVLDAGALIYSVDMGKNQTSGTMFLRRVSEATGGRYFSVSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRNGYEYEPSGH
Ga0187875_1001350113300018035PeatlandVLGAGALIYSVDMGARENQTRGSMFLRRVSEATGGRYFSLRFSQHDSAATVLDAVLEDLRASYVVTYDLPSRQAGFHSLRLLPTHNLNLTFHSRNGYEYEPGGHLMGDR
Ga0187875_1008301733300018035PeatlandDFLSTHRRAGDGSTVRPVLLLFSDGCDTFSMHSAWEALQAALDAGALIYSVDMGNAQTPTAGSIFLRQVSSATGGRYFPLRTQHARPEDSAAVLTAVLDDLRASYVVTYDLPSHQAGFHSLRLMPTHNLNLTFHSRGGYNYDPSDR
Ga0187875_1051157213300018035PeatlandPREALQAVLDEGALIYSVDMGKGQTSGTMLLRRVSQATGGRYFAYSLRPFQQDSAATVLNAVLEDLRASYVVTYDLPSHQAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0187883_1019745333300018037PeatlandDAGALIYSVDMETSKNQASYQTSGSAFLRQVSEATGGRYFTFSPRSSQQDGAAAVLDAVLQDLRASYVVTYDLPNHHDGFHALRLLPTHNLNLTFHSRNGYLYERSLP
Ga0187871_1029663613300018042PeatlandEALQAVLGAGALIYSVDMGARENQTRGSMFLRRVSEATGGRYFSLRFSQHDSAATVLDAVLEDLRASYVVTYDLPSRQAGFHSLRLLPTHNLNLTFHSRNGYEYEPGGHLMGDR
Ga0187871_1032041023300018042PeatlandLFSDGMDTISLHSASEALQAVLATGALIYSADVGAPDTPTSGSVFLRRISTATGGRYFPPRFTLNENAAFLLNAVLEDLRASYVVTYDVPSHLTGFHALRLLPTHNLNLTFHSRSGYSYESADH
Ga0187871_1038264013300018042PeatlandSEALQAAQGTGALIYSVDMGRTEIPSPGSTFLRRLSEATGGRYFPLALRNSPQENAAAVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHKLNFTFHSRNGYDYEPGNR
Ga0187887_1005422533300018043PeatlandDVARLRAVKSGGATPLYDALIFATDFLSTHRRAGDGSTVRPVLLLFSDGCDTFSMHSAWEALQAALDAGALIYSVDMGNAQNPTAGSTFLRQVSSATGGRYFPLRTQHARPEDSAAVLTAVLDDLRASYVVTYDLPSHQAGFHSLRLMPTHNLNLTFHSRGGYNYDPSDR
Ga0187887_1071495523300018043PeatlandLIYSVDVVRTEIPSPRRIVLQLLSEATGGRYFPLALRNSPQENAAAVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHKLNFTFHSRNGYDYEPGNR
Ga0187890_1010067513300018044PeatlandQHSSREALQAVLGAGALIYSVDMGARENQTRGSMFLRRVSEATGGRYFSLRFSQHDSAATVLDAVLEDLRASYVVTYDLPSRQAGFHSLRLLPTHNLNLTFHSRNGYEYEPGGHLMGDR
Ga0187769_1023405833300018086Tropical PeatlandMHSPREALQAVQDEGALIYSVDMGKDQTSGTTFLRRVSEATGGRYFSLRSSHQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRSGYDYEPSGQ
Ga0187852_134575223300019082PeatlandGNDTISLHSARDALQAVLDGGALIYSVDIGTSESQSSGSMFLRQVSEATGGRYFSLGDGAATVLNAVLEDLRASYVVTYDLPSQQAGFHSLRLLPTHNLNLKFHSRNGYDYEPSGH
Ga0224558_104622333300023090SoilIYSVDMGTSAYQASYHASNETSGSTFLRQISRATGGRYFSFSPRSSQQDGAAAVLDAVLEDLRASYVVTYDLPNHQDGFHALRLLPTHNLNLTFHSRNGYLYERSRP
Ga0224559_117656423300023091SoilTISLHSAPEALQAVLDEGALIYSVDMGTSANQASYRISGSTFLRQLSEATGGRYFSFSLRSSQQDGAPATVLTTVLEDLRASYVVAYDLPQHQDGFHSLRLLPTHNLNLTFHSRNGYFYERSIR
Ga0208039_101593633300025454PeatlandLFSDGNDTISWHSPRQALEAVLDEGVLIYSVDMGTPENRSSNQASNETMGSMFLRQVSDATGGRYFSLRSAHQDGAATVLNAVLEDLRASYVVTYDLPSHQTGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0208080_107345313300025553Arctic Peat SoilRRAGVRPVLILFSDGNDTISLHSPREALDAVLAGGALIYSIDMGTSENQSTGGMFLRQVSEVTGGRYFSLRFSQQDGAATVLNAVLEDLRASYVVTYDLPSHQPGFHSLRLLPTHNLNLTFHSRNGYYYEHSVR
Ga0207930_111296823300025604Arctic Peat SoilRQVLILFSDGNDTISLHSPREALEALVDGGALIYSVDMGPSKNQTPIQTMGSMFLRQVSEATGERYFSLHSSKSGSAATVLNAVLEDLRASYVVTYDLPSHQVGFHSLRLLPTHNPNLKFHSRKGYHYEPSGQ
Ga0208691_106789723300025612PeatlandDTISLHSASEALQAVLEAGALIYSADVGTPDRPTSGSVFLQKISAATGGRYFSPRFTLNDGAAPLWNAVLEDLHASYVVTYDLPSHQAGFHSLRLMPTHNLNLTFHSRGGYNYDPSDR
Ga0209176_1011484423300025854Arctic Peat SoilDTVVAGGALVYSVDTGKPANPSAGSMFLRQVSDATGGRYFSLQDGVANVMSAVLEDLRASYVVTYDLPSQQAGFHSLRLMPTHNVNLRFHSRNRYYDEPSLR
Ga0209839_1027703013300026294SoilVLILFSDGYDTISLHSAGEALQAAQDAGALIYSVDMGRADTGKAENSSRGSGFLRQVSDATGGRYFSLSPRFSQQDTAQVLNAVLGDLRASYVVTYDLPSQEAGFHSLRLLPTHNLNLTFHNRNGYDYEPSGQ
Ga0209117_108034813300027645Forest SoilDAVVAGGALIYSVDMGKATNPSAGGMFLRQVSDASGGRYFPLQEGIANVLSAVLEDLRASYVVTYDLPSHQAGLHSLRLMPTHNLNLTFHSRNSYYYEPSLR
Ga0209517_1008854713300027854Peatlands SoilDTFSLHSPREALEAVLDGGALIYSVDMGTSENQTSGSTFLRQASDATGGRYFSLRFSQQHGAAAVLNAVLEDLRASYVVAYDLPRHQDGFHALRLLPTHNLNLKFHSRNGYYYEPSGH
Ga0209698_1011776613300027911WatershedsGALVYSVDMGKSENQSSSQILENQASGSTFLRRVSQATGGRYFSSPRGSQQNGAAAVLNTVLEDLRASYVVTYALPSHEPGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0209698_1046021123300027911WatershedsLIFAADFIAQHRGTGGRGGGRNDARPVVILFSDGYDTISLHSAREALQAVLDEGALIYCVDMGKSENQSPTQPWGNQTSGNQAPGSAFLRQVSEATGGRYFSVPRGNSRQNGAAAVLNAVLEDLRASYVVTYNLPSHEAGFHSLRLLPTHNLNLTFHSRNGYEYEPSSR
Ga0209698_1063535923300027911WatershedsGALVYSVDMGKSENQSSSQILENQASGSTFLRRVSQATGGRYFSSPRGSQQNGAAAVLNAVLEDLRASYVVTYPLPSHEAGFHSLRLLPTHNLNLTFHSRNGYDYEPSGH
Ga0247275_117956623300029817SoilREALQAVLDEGAPIYSVDMGKDQTSGTMFLRRVSEATGGRYFAFSLRPSQQDGAATVLNAVLEDLRASYVVTYDLPSYQAGFHSLRLLPTHNLNLTFHSRTGYDYEPSGH
Ga0302270_1039352913300030011BogSEALRAAQGAGTMIYAVDLGSSLTSGGKFLQRVADGTGGRYFYPRFSGNQGAAALLNTVFEDLRASYVVTYDLPSHQAGFHALRLLPTHNLNLTFHSRGGYNYEPSDR
Ga0311355_1039685633300030580PalsaLVYCVDMGKPDTGEVKNLNSGGGLLRQFSDATGGRYFSLSTKFSQPHAAPVLNAVLEDLRASYVVTYDLPTHETGFHSLRLLPTHNLNLAFHSRNGYEYEPSGR
Ga0335084_1009154413300033004SoilAIDAATSSGALLYAVDTGTPGSEGSAFLRRVSEATGGRYFVARDGAATVLKAVLDDLRSSYVVTYEPPGRQKGFHSLRLLPTRNLNLRFHSRNGYYYETRVR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.