Metagenome / Metatranscriptome Family F097841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097841
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	57 residues
Representative Sequence	MNENELNELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIERHPVGPK
Number of Associated Samples	65
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.38 %
% of genes near scaffold ends (potentially truncated)	13.46 %
% of genes from short scaffolds (< 2000 bps)	73.08 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.231 % of family members)
Environment Ontology (ENVO)	Unclassified (56.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.22% β-sheet: 0.00% Coil/Unstructured: 48.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.2.6.1: HR1 repeat	d1cxzb_	1cxz	0.87415
a.29.6.0: automated matches	d1xg2b1	1xg2	0.87067
a.246.1.1: Hyaluronidase post-catalytic domain-like	d2choa1	2cho	0.87037
e.8.1.0: automated matches	d4ahca2	4ahc	0.86475
a.25.1.3: Manganese catalase (T-catalase)	d1o9ia_	1o9i	0.86268

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13545	HTH_Crp_2	12.50
PF00027	cNMP_binding	3.85
PF00011	HSP20	3.85
PF07238	PilZ	2.88
PF08281	Sigma70_r4_2	1.92
PF13620	CarboxypepD_reg	1.92
PF01740	STAS	1.92
PF02401	LYTB	1.92
PF00072	Response_reg	0.96
PF00989	PAS	0.96
PF00196	GerE	0.96
PF04055	Radical_SAM	0.96
PF13276	HTH_21	0.96
PF14566	PTPlike_phytase	0.96
PF04831	Popeye	0.96
PF01264	Chorismate_synt	0.96
PF13360	PQQ_2	0.96
PF03471	CorC_HlyC	0.96
PF02405	MlaE	0.96
PF04909	Amidohydro_2	0.96
PF00990	GGDEF	0.96
PF12088	DUF3565	0.96
PF12704	MacB_PCD	0.96
PF13419	HAD_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	3.85
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	3.85
COG0082	Chorismate synthase	Amino acid transport and metabolism [E]	0.96
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.81 %
Unclassified	root	N/A	14.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.27 %
Unclassified	root	N/A	14.42 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.27 %
Unclassified	root	N/A	14.42 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.92 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.27 %
Unclassified	root	N/A	14.42 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.27 %
Unclassified	root	N/A	14.42 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.27 %
Unclassified	root	N/A	14.42 %
Microcoleaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.27 %
Unclassified	root	N/A	14.42 %
Microcoleus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.27 %
Unclassified	root	N/A	14.42 %
Microcoleus vaginatus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → Microcoleus vaginatus	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10209232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300001593\|JGI12635J15846_10577836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300002245\|JGIcombinedJ26739_100035348	All Organisms → cellular organisms → Bacteria	4460	Open in IMG/M
3300002245\|JGIcombinedJ26739_100594913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300002245\|JGIcombinedJ26739_100811267	Not Available	816	Open in IMG/M
3300002245\|JGIcombinedJ26739_101020681	Not Available	712	Open in IMG/M
3300002245\|JGIcombinedJ26739_101090099	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300002671\|Ga0005481J37269_105953	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300004080\|Ga0062385_11118526	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300004082\|Ga0062384_100222379	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300004091\|Ga0062387_101781376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → Microcoleus vaginatus	502	Open in IMG/M
3300004104\|Ga0058891_1015412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300004631\|Ga0058899_10187863	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300005437\|Ga0070710_10960223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005602\|Ga0070762_10168103	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300006174\|Ga0075014_100621468	Not Available	620	Open in IMG/M
3300006176\|Ga0070765_100218566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1736	Open in IMG/M
3300006176\|Ga0070765_102283089	Not Available	504	Open in IMG/M
3300009090\|Ga0099827_10303786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1350	Open in IMG/M
3300010343\|Ga0074044_10011543	All Organisms → cellular organisms → Bacteria	6665	Open in IMG/M
3300010343\|Ga0074044_11070966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300010876\|Ga0126361_10391345	All Organisms → cellular organisms → Bacteria	2916	Open in IMG/M
3300011120\|Ga0150983_10126484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300011120\|Ga0150983_13411293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1066	Open in IMG/M
3300011120\|Ga0150983_16057689	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300011270\|Ga0137391_10039805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3981	Open in IMG/M
3300012096\|Ga0137389_10078551	Not Available	2572	Open in IMG/M
3300012202\|Ga0137363_10031309	All Organisms → cellular organisms → Bacteria → Acidobacteria	3678	Open in IMG/M
3300012203\|Ga0137399_10625980	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300012918\|Ga0137396_10327620	Not Available	1133	Open in IMG/M
3300012925\|Ga0137419_10219697	Not Available	1417	Open in IMG/M
3300012925\|Ga0137419_11383508	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300014501\|Ga0182024_10035140	All Organisms → cellular organisms → Bacteria	8439	Open in IMG/M
3300019885\|Ga0193747_1000431	All Organisms → cellular organisms → Bacteria	14195	Open in IMG/M
3300020004\|Ga0193755_1044222	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300020579\|Ga0210407_10000615	All Organisms → cellular organisms → Bacteria	38728	Open in IMG/M
3300020579\|Ga0210407_10104273	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300020579\|Ga0210407_10240852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300020579\|Ga0210407_10370209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300020579\|Ga0210407_10588956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300020579\|Ga0210407_10848760	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300020580\|Ga0210403_10001445	All Organisms → cellular organisms → Bacteria → Acidobacteria	22504	Open in IMG/M
3300020580\|Ga0210403_10082077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2599	Open in IMG/M
3300020580\|Ga0210403_10195634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1658	Open in IMG/M
3300020580\|Ga0210403_10360346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300020580\|Ga0210403_11132010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300020581\|Ga0210399_10007480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8532	Open in IMG/M
3300020581\|Ga0210399_10344601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300020581\|Ga0210399_10420317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300020581\|Ga0210399_10525415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300020583\|Ga0210401_10260459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1594	Open in IMG/M
3300021088\|Ga0210404_10220281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300021168\|Ga0210406_10316382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1266	Open in IMG/M
3300021170\|Ga0210400_10014638	All Organisms → cellular organisms → Bacteria	6222	Open in IMG/M
3300021170\|Ga0210400_10981548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300021171\|Ga0210405_10020477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5372	Open in IMG/M
3300021180\|Ga0210396_10075742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3058	Open in IMG/M
3300021181\|Ga0210388_10523158	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300021403\|Ga0210397_10572629	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300021405\|Ga0210387_10820172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300021420\|Ga0210394_10024529	All Organisms → cellular organisms → Bacteria	5504	Open in IMG/M
3300021420\|Ga0210394_10307341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1392	Open in IMG/M
3300021432\|Ga0210384_10047452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3914	Open in IMG/M
3300021432\|Ga0210384_10332952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1367	Open in IMG/M
3300021433\|Ga0210391_10011382	All Organisms → cellular organisms → Bacteria → Acidobacteria	7200	Open in IMG/M
3300021433\|Ga0210391_10374538	Not Available	1117	Open in IMG/M
3300021433\|Ga0210391_10734760	Not Available	773	Open in IMG/M
3300021433\|Ga0210391_11526229	Not Available	512	Open in IMG/M
3300021474\|Ga0210390_11484885	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300021478\|Ga0210402_10005429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	11416	Open in IMG/M
3300021478\|Ga0210402_10156514	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300021478\|Ga0210402_10785098	All Organisms → cellular organisms → Bacteria → Acidobacteria	877	Open in IMG/M
3300021479\|Ga0210410_10000707	All Organisms → cellular organisms → Bacteria	34407	Open in IMG/M
3300021479\|Ga0210410_10013841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6952	Open in IMG/M
3300021479\|Ga0210410_10410231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300021479\|Ga0210410_11708602	Not Available	523	Open in IMG/M
3300022533\|Ga0242662_10176635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300022533\|Ga0242662_10317076	Not Available	524	Open in IMG/M
3300026374\|Ga0257146_1033569	Not Available	833	Open in IMG/M
3300026490\|Ga0257153_1006246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2341	Open in IMG/M
3300027562\|Ga0209735_1073936	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300027575\|Ga0209525_1006720	All Organisms → cellular organisms → Bacteria → Acidobacteria	2677	Open in IMG/M
3300027635\|Ga0209625_1000302	All Organisms → cellular organisms → Bacteria	12638	Open in IMG/M
3300027645\|Ga0209117_1038076	Not Available	1472	Open in IMG/M
3300027645\|Ga0209117_1064092	Not Available	1059	Open in IMG/M
3300027645\|Ga0209117_1119983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300027674\|Ga0209118_1126097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300027684\|Ga0209626_1062239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300027701\|Ga0209447_10127431	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027884\|Ga0209275_10290438	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300027889\|Ga0209380_10138619	All Organisms → cellular organisms → Bacteria → Acidobacteria	1419	Open in IMG/M
3300028013\|Ga0265350_105439	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300028047\|Ga0209526_10067668	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300028047\|Ga0209526_10113501	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300028536\|Ga0137415_10397005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300028906\|Ga0308309_10208207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1615	Open in IMG/M
3300030589\|Ga0210255_10636506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300031122\|Ga0170822_12709879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300031708\|Ga0310686_106968326	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300031720\|Ga0307469_11118339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300031820\|Ga0307473_11539853	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300032180\|Ga0307471_100120496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2442	Open in IMG/M
3300032180\|Ga0307471_101267996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300032180\|Ga0307471_101868894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.19%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.19%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.46%
Loam	Environmental → Terrestrial → Soil → Loam	28.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	22.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002671	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF130 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028013	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE2	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030589	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_102092323	3300001593	Forest Soil	MTENKQCELAELLVELEQTLLRLKVTKDLERRRLLLRKMTRLFAEIERNPTLPV*
JGI12635J15846_105778363	3300001593	Forest Soil	MTEKELCELAELLAELEQTLLRLKVTKDLERRRLLLRKMTRLFAEIERNPIAPK*
JGIcombinedJ26739_1000353483	3300002245	Forest Soil	MTEKELCELAELLAELEQSLLRLKVTKDLERRRLLLCKVSRLFAESERNPIAPK*
JGIcombinedJ26739_1005949131	3300002245	Forest Soil	MYKNKLIELAELLRELEQTLLTLKATEEPARRRLLVRKISRLFTQIERNPIASIMSRYLPIHLK*
JGIcombinedJ26739_1008112672	3300002245	Forest Soil	MNENELKKLAELLRKLEETLLTLQVTENPERRRLLVCKISRLFAEIELYPIGPI*
JGIcombinedJ26739_1010206812	3300002245	Forest Soil	MPEKELSTLAELLRELEESLLTLKATEDPERRRMLLRKMRRLFAEIELHPIAPK*
JGIcombinedJ26739_1010900992	3300002245	Forest Soil	MRFPKKELAKLADLLRELEQTLLILKAEEDTEQRRLLVRKMSSLIAEIDRAPIALK*
Ga0005481J37269_1059532	3300002671	Forest Soil	MYENELIELAELLRELEQTLETLKVTEEPARRRLLVRKISRLFTQIEGNPIASNMSRYPPIHLE*
Ga0062385_111185261	3300004080	Bog Forest Soil	MNENELTELAELLRELELTLLTLKAMEDLEQRRLLLRKMSRLFAEIERKPIAPK*
Ga0062384_1002223791	3300004082	Bog Forest Soil	MVSACMNENELTELAELLRELELTLLTLKAMEDLEQRRLLLRKMSRLFAEIERKPIAPK*
Ga0062387_1017813761	3300004091	Bog Forest Soil	MARNKLNELAELVAELEQTLLRLKATKDTERRQLLLRKMRRLLAEIERNPISPI*
Ga0058891_10154121	3300004104	Forest Soil	MYENELIELAELLRELEQTLETLKVTEEPARRRLLVRKISRLFTQIEGNPIASNMSRYP
Ga0058899_101878631	3300004631	Forest Soil	MTNSHGLGLMNENELNELAELLRELEETLLTLQATENPERRRLLVCKISRLFAEIELHPLGPK*
Ga0070710_109602231	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MVLVCMNENELIKLAELLRELEETLLTLQATKGPERRRLLVCKISR
Ga0070762_101681033	3300005602	Soil	MVSVCTYEDELIELAELLRELEQTLQTLKATEEPARRRLLVRKISRLFTQIEGKPIASNMSRYPPIHLE*
Ga0075014_1006214681	3300006174	Watersheds	MYESELIELAELLRELEQTLLTLKATEEPARRRLLVRKISRLFTQIGRNPIAPNMIRYPPIHPG*
Ga0070765_1002185664	3300006176	Soil	MVLVCMNENELNELAELLRELEETLLTLQATKNPERRRLLVCEISRLFAEIELHPIGPTPD*
Ga0070765_1022830892	3300006176	Soil	MAENELNELAELLRELEETLVTLKVTEDPERRRLLLRKMSRLLAEIERNPIAPK*
Ga0099827_103037861	3300009090	Vadose Zone Soil	MPEKELANLAELLQELEETLLTLKATEDPERRRMLLRKMRRLFAEIELNQIAPNE*
Ga0074044_100115438	3300010343	Bog Forest Soil	VAEKKSNELAELLRELEETLSTLKATEDPERRRLLLRKMSRLFAEIDRKHIAPK*
Ga0074044_110709661	3300010343	Bog Forest Soil	ISVVSVCMNENELNELAELLRELEETLSTLQATKNPECRRLLVRKISRLFAAIERIPIAPKMSHHPSILVSL*
Ga0126361_103913452	3300010876	Boreal Forest Soil	MAEKELAELLRDLVQILVTLKATKDPGRRRLLLRKMRQLFAEIERNPIAPI*
Ga0150983_101264842	3300011120	Forest Soil	MTENELRELSELLRELEETLAMLKVAKDPERRRLLVRKMSRLFAEIEPNPIAPN*
Ga0150983_134112931	3300011120	Forest Soil	MVLVYMNDNELKELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIELHPVGPK*
Ga0150983_160576892	3300011120	Forest Soil	MTEKELCELAELLAKLEQTLLRLKMTKDLERRRLLLRKVSRLFAEIERNPIAPK*
Ga0137391_100398053	3300011270	Vadose Zone Soil	MVLVRMNENELNELAELLRELEETLLTLQKTKNPERRCPLVCKISRLVAEIELHTVVPK*
Ga0137389_100785514	3300012096	Vadose Zone Soil	MVLVRMNENELNELAELLRELEETLLTLQKTKNPEPRCPLVCKINRLVAEIELHTVVPK*
Ga0137363_100313092	3300012202	Vadose Zone Soil	MTENELTELAELLAKLEQTLLSLKATRDPERRRLLIRKMSRLFTEIERNPVGPK*
Ga0137399_106259803	3300012203	Vadose Zone Soil	MAEKELNKLAELLAELEQTLLSLQATKGHERRRLLLRKISRLFEEIERNPIAPRLVTPDWRAGGK*
Ga0137396_103276202	3300012918	Vadose Zone Soil	MAEKELNKLAELLAELEQTLLSLQATKGRERRRLLLRKISRLFEEIERNPIAPRLVTPDWRAGGK*
Ga0137419_102196972	3300012925	Vadose Zone Soil	MAEKELNKLAELLAELEQTLLSLQATKGHERRRLLLRKISRLFEEIERNPIAPRLATPDWRAGGK*
Ga0137419_113835082	3300012925	Vadose Zone Soil	MTENELRELAQLLAELEQTLLRLKVKKDLERRRLLLRKMSRLFAEIERNPIAAK*
Ga0182024_100351407	3300014501	Permafrost	MALNELAELLGELEQTLLTLKETKEPERRRLLVCKMSRLFAEIDRNPAHAEISH*
Ga0193747_10004315	3300019885	Soil	MIEKDLCELAELLAELEQTLLRLKVTKDLERRRLLLRKMSRLFAEIERNPIVPK
Ga0193755_10442222	3300020004	Soil	MAENELNELAELLAELEQTLLSLQATRHPERRRLLIRKISRLFEEMECNPIAPRLVTPD
Ga0210407_1000061533	3300020579	Soil	MNENELNELAELLRELEETLLTLQATKNPEHRRLLVSKISRLFAEIELHPVEPK
Ga0210407_101042733	3300020579	Soil	MKRHRPTMAESELSKLAERLRRLEQTLLTLKETNDVERRRLLLRKISRLFAQIDRHHIEQ
Ga0210407_102408522	3300020579	Soil	MVLVYMNDNELKELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIGLHPVGPK
Ga0210407_103702092	3300020579	Soil	MYENELIELAELLRELEQTLETLKVTEEPARRRLLVRKISRLFTQIEGNPIASNMSRYPPFHLE
Ga0210407_105889562	3300020579	Soil	MVLVCMNENELKELAELLLELEETLLTLQATKSPERRRLLVCKISRLFAEIERQPVGPK
Ga0210407_108487602	3300020579	Soil	MEPIALNELAELLGDLEQTLLTLKVTKDLARRRLLVRKISQLFAEIERNPCHAEMSH
Ga0210403_1000144516	3300020580	Soil	MYEDELIELAELLRELEQTLQTLKVTEEPARRRLLVRKISRLFTQIEGNPIASNMSRYPPFHLE
Ga0210403_100820771	3300020580	Soil	MDENELNELAELLRELEETLLTLQATENPESRRLLVCKISRLFAEIERHPLGPI
Ga0210403_101956343	3300020580	Soil	MNENELNKLAELLRELEETLLTLQATENPERRRLLVCKISRLFAEIELHPIEPK
Ga0210403_103603463	3300020580	Soil	MNENELNELAELLRELEETLLTLQATKNPERRRLLVCEISQLFAEIELHPIGPTPD
Ga0210403_111320101	3300020580	Soil	MNENELKELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIELRPVGPKWVTPGQSLILV
Ga0210399_100074805	3300020581	Soil	MNENELNELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIERHPVGPK
Ga0210399_103446013	3300020581	Soil	MYENELIELAELLRELEETLQTLKVTEEPARRRLLVRKISRLFTQIEGNPIASNMSRYPPFHLE
Ga0210399_104203172	3300020581	Soil	MYENELIELAELLRELEQTLLTLQATKSPGRRLLLVRKIDRLFAEIDRNPIAPK
Ga0210399_105254151	3300020581	Soil	MVLVYMNDNELKELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIGLHPVRPK
Ga0210401_102604592	3300020583	Soil	MNENELKELAELLLELEETLLTLQATKSPERRRLLVCKISRLFAEIERQPVGPK
Ga0210404_102202813	3300021088	Soil	MNENELKELAELLRELEETLLALQATKNPERRRLLVCKISRLFAEIELHPVGPK
Ga0210406_103163822	3300021168	Soil	MYENELIELAELLRELEQTLETLKVTEEPARRRLLVRKISRLFTQIEGNPIASNMSRYPPIHLE
Ga0210400_100146381	3300021170	Soil	MNENELSELAELLRELEETLLTLQATKNPERRRLLVCEISRLFAEIELHPIGPTPD
Ga0210400_109815483	3300021170	Soil	MDENELKELAELLRELEETLLTLQATKNPERRRLLVCKISQLFAEIELHPVRPK
Ga0210405_100204777	3300021171	Soil	MAEKELNELVELLRELEETLVRLKTMKNLERRRRLLRKISCLFEEIERNPISPN
Ga0210396_100757424	3300021180	Soil	MNENELNELAELLRELEETLLTLQATENPERRRLLVCKISRLFAEIELHPLGPK
Ga0210388_105231582	3300021181	Soil	PHSDCMAENESNELAELLRELEQTLLTLKTTKDPERRRLLLRKMSRLFALIDGNHIEQN
Ga0210397_105726291	3300021403	Soil	RTVLVCMNENELNELAELLRELEETLLTLQATENPERRRLLVCKISRLFAEIELHPLGPK
Ga0210387_108201723	3300021405	Soil	MVLVYMNDNELKELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIGLHPIGPK
Ga0210394_100245294	3300021420	Soil	MAENELNELAELLRDLEQTLLTLKAMEDPERRRLLLRKMSRLFSQIERNPIAPK
Ga0210394_103073413	3300021420	Soil	MYEDELIELAELLRELEETLQTLKATEEPAHRRLLVRKISRLFTQIEGNPIASNMSRYPPIHVE
Ga0210384_100474523	3300021432	Soil	MVLVCMNENELKELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIELQPVGPK
Ga0210384_103329523	3300021432	Soil	MTENELRELSELLRELEETLAMLKVAKDPERRRLLVRKMSRLFAEIEPNPIAPN
Ga0210391_100113827	3300021433	Soil	MAENELNELAELLRELEETLVTLKVTEDPERRRLLLRKMSRLLAEIERNPIAPK
Ga0210391_103745382	3300021433	Soil	MAENELNELAELLRDLEQTLLTLKATEDPERRRLLLRKMSRLFSQIERNPIAPK
Ga0210391_107347602	3300021433	Soil	MESMALNELAALLGELEQTLLMLKVTKDPGRRRLLVRKMSRSFAEIERNPNTRNANDQ
Ga0210391_115262291	3300021433	Soil	MNENELNELAELLRELEETLLTLQATKNPERRRLLVCEISRLFAEIE
Ga0210390_114848851	3300021474	Soil	MESMALNELAELLGELEQTLLTLKVTKDPGRRRLLVRKMSRLFAEIERNPCHAQMS
Ga0210402_100054299	3300021478	Soil	MVLVCMNENELNELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIERNPIAPK
Ga0210402_101565143	3300021478	Soil	MVIVLSRKADNELEELAKLLRELELTLLRLNVTEDVRSRQVFIRKMCRLFSEIERYPIEP
Ga0210402_107850983	3300021478	Soil	MTENELRELSELLRELEETLAMLKVAKDPERRRLLVRKMSRLFAE
Ga0210410_1000070728	3300021479	Soil	MAEKELNELVELLRELEETLVRLKTIKSLARRRLLVRKISRLFEEIERNPVSPN
Ga0210410_100138412	3300021479	Soil	MNENELKELAELLRELEETLLTLQATKNPGRRRLLVCKISRLFAEIELHPVGPK
Ga0210410_104102312	3300021479	Soil	MYENELIELAELLRELEETLQTLKVTEEPARRRLLVRKISRLFTQIEGNPIASNMSRYPPIHLE
Ga0210410_117086022	3300021479	Soil	IRVVLVCMNENELKELAELLRELEETLLTLQATENLERRRLLVCKISRLFTEIELYPVEP
Ga0242662_101766351	3300022533	Soil	MVLVYMNDNELKELAELLRELEETLLTLQATKNPEHRRLLVSKISRLFAEIELHPVEPK
Ga0242662_103170761	3300022533	Soil	MVLVCMNENELNELAELLRELEETLLTLQATENPERRRLLVCKISRLFAEIELHPIGPTP
Ga0257146_10335692	3300026374	Soil	VNEKELNELAELLRELEETLARLKVAKDPERRRLLVRKMSRLFAEIELNPIAPN
Ga0257153_10062462	3300026490	Soil	MVLVCMNQNELKKLAELLRELEETLLTLQATKNPDRRRLLICKISRLFAEIELHPVGPTL
Ga0209735_10739362	3300027562	Forest Soil	MTEKELCELAELLAELEQSLLRLKVTKDLERRRLLLCKVSRLFAESERNPIAPK
Ga0209525_10067205	3300027575	Forest Soil	MAENELNELAELLRELEQTLLTLKVTEDLERRRLLLRKMSRLFAEIERNPIAPK
Ga0209625_100030212	3300027635	Forest Soil	MTEKELCELAELLAELEQSLLRLKVTKDLERRRLLLCKVSRLFAEIERNPIAPK
Ga0209117_10380763	3300027645	Forest Soil	MPEKELANLAELLRQLEESLLTLKATNDPEHRRELLRKMRRLFAEIERNQIAPG
Ga0209117_10640922	3300027645	Forest Soil	LIEKLSVNEKELNELTELLRELEETLARLKVAKDPERRRLLVRKMSRLFAEIELNPIAPN
Ga0209117_11199831	3300027645	Forest Soil	MTEKELCELAELLAELEQTLLRLKVTKDLERRRLLLRKMTRLFAEIERNPTLPV
Ga0209118_11260971	3300027674	Forest Soil	MTEKELCELAALLAELEQTLLRLKVTKDLERRRLLLRKMTRLFAEIERNPIAPK
Ga0209626_10622393	3300027684	Forest Soil	MNENELKKLAELLRKLEETLLTLQVTENPERRRLLVCKISRLFAEIELYPIGPI
Ga0209447_101274313	3300027701	Bog Forest Soil	MNENELTELAELLRELELTLLTLKAMEDLEQRRLLLRKMSRLFAEIERKPIAPK
Ga0209275_102904382	3300027884	Soil	MVSVCTYEDELIELAELLRELEQTLQTLKATEEPARRRLLVRKISRLFTQIEGKPIASNMSRYPPIHLE
Ga0209380_101386191	3300027889	Soil	MGENELNELAELLRELEQTLLTLKETEDPERRRLLLRKISRLFAQIDRNHIEKK
Ga0265350_1054392	3300028013	Soil	MYENELIELAELLRELEQTLLTLKATEEPARRRLLVRKISRLFTQIEGNPIASNMGRYPPIHLE
Ga0209526_100676684	3300028047	Forest Soil	MTEKELCELAELLAELEQTLLRLKVTKDLERRRLLLRKMTRLFAEIERNPIAPK
Ga0209526_101135012	3300028047	Forest Soil	MYKNKLIELAELLRELEQTLLTLKATEEPARRRLLVRKISRLFTQIERNPIASIMSRYLPIHLK
Ga0137415_103970051	3300028536	Vadose Zone Soil	MAEKELNKLAELLAELEQTLLSLQATKGHERRRLLLRKISRLFEEIERNPIAPRLVTPDWRAGGK
Ga0308309_102082074	3300028906	Soil	MVLVCMNENELNELAELLRELEETLLTLQATKNPERRRLLVCEISRLFAEIELHPIGPTP
Ga0210255_106365061	3300030589	Soil	MTENELNELAELLRDLEQTLLTLKATKDAERRRLLLRKMSRLFAQIDHDQIEKK
Ga0170822_127098791	3300031122	Forest Soil	MVLVSMNENELNKLAELLRELEETLLTLQATKSPERRRLLVCKISRLFAEIEL
Ga0310686_1069683261	3300031708	Soil	MVSACMNENELNELAELLRELEETLITLKATEDPERRRLLLRKMSRLFAQIDRS
Ga0307469_111183391	3300031720	Hardwood Forest Soil	MVIILSRKAENELEELAELLRELQQTLLRLNVTKDLKSRQVVIRKMSRLFAEIERNPIAP
Ga0307473_115398531	3300031820	Hardwood Forest Soil	MVIILSRKAENELEELAELLRELQQTLLMLNATKDVKSRQVVIRKMSRLFAEIERNPIAP
Ga0307471_1001204964	3300032180	Hardwood Forest Soil	MDESELKELAELLRELEETLLTLQATKNPERRRLLVCKISRLFAEIELYPVELK
Ga0307471_1012679962	3300032180	Hardwood Forest Soil	VNEKELNELAELLRELEETLARLKVAKDPERRRLLVLKMSRLFAEIEPNSIALN
Ga0307471_1018688943	3300032180	Hardwood Forest Soil	MNENELKELAELLRELEETLLTLQATENLERRRLLVCKISRLFTEIELYPVEPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences