Metagenome / Metatranscriptome Family F097857

Basic Information
Family ID	F097857
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	104 residues
Representative Sequence	AVPAVDGSLLGAACLISDRSEFERIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSTADTGTRASAAGKVI
Number of Associated Samples	101
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	98.08 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (98.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.577 % of family members)
Environment Ontology (ENVO)	Unclassified (27.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.71% β-sheet: 0.00% Coil/Unstructured: 35.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF12867	DinB_2	7.69
PF07606	DUF1569	7.69
PF00512	HisKA	2.88
PF13305	TetR_C_33	0.96
PF14559	TPR_19	0.96
PF12704	MacB_PCD	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.19 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.88 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.88 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.88 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Unclassified	root	N/A	1.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.54 %
Unclassified	root	N/A	1.92 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1025686	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300001471\|JGI12712J15308_10057922	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300004092\|Ga0062389_101769227	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300004635\|Ga0062388_101341670	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005434\|Ga0070709_11566601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300005533\|Ga0070734_10459081	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005538\|Ga0070731_10076695	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300005538\|Ga0070731_10557863	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300005541\|Ga0070733_10862415	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005591\|Ga0070761_10372236	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005602\|Ga0070762_10192502	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300005921\|Ga0070766_10671165	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006086\|Ga0075019_11008983	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006174\|Ga0075014_100126591	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300006860\|Ga0063829_1286515	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300009524\|Ga0116225_1498242	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300009621\|Ga0116116_1197105	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300009762\|Ga0116130_1297565	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010048\|Ga0126373_11080369	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300010048\|Ga0126373_12327842	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010343\|Ga0074044_10041510	All Organisms → cellular organisms → Bacteria	3193	Open in IMG/M
3300010358\|Ga0126370_12267250	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300010366\|Ga0126379_13220559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300010398\|Ga0126383_10848252	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300011090\|Ga0138579_1175694	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300012989\|Ga0164305_10717833	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300014165\|Ga0181523_10374260	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300014199\|Ga0181535_10740016	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300014200\|Ga0181526_10213584	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300014489\|Ga0182018_10727712	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300014501\|Ga0182024_10096620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4322	Open in IMG/M
3300015193\|Ga0167668_1011792	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300015372\|Ga0132256_100530376	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300015374\|Ga0132255_105219254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300016371\|Ga0182034_10907690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300016445\|Ga0182038_10941365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300016702\|Ga0181511_1316894	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300016750\|Ga0181505_10605413	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300017822\|Ga0187802_10058824	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300017943\|Ga0187819_10176589	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300017946\|Ga0187879_10004266	All Organisms → cellular organisms → Bacteria	9551	Open in IMG/M
3300017948\|Ga0187847_10172475	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300017955\|Ga0187817_10027916	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300017961\|Ga0187778_10531283	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300017975\|Ga0187782_10126890	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300018004\|Ga0187865_1316846	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300018008\|Ga0187888_1098373	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300018009\|Ga0187884_10174606	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300018025\|Ga0187885_10030989	All Organisms → cellular organisms → Bacteria	2904	Open in IMG/M
3300018042\|Ga0187871_10619307	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300018047\|Ga0187859_10525478	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300019786\|Ga0182025_1314193	Not Available	602	Open in IMG/M
3300020580\|Ga0210403_11346610	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300020582\|Ga0210395_10212033	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300021181\|Ga0210388_11688442	Not Available	524	Open in IMG/M
3300021401\|Ga0210393_11389134	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300021402\|Ga0210385_10582837	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300021402\|Ga0210385_11237192	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300021474\|Ga0210390_11034169	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300021475\|Ga0210392_10744567	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300021477\|Ga0210398_11172841	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300022518\|Ga0224548_1042348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300022557\|Ga0212123_10682821	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300022728\|Ga0224566_101342	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300022731\|Ga0224563_1026222	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300022733\|Ga0224562_1005806	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300023019\|Ga0224560_102042	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300024271\|Ga0224564_1074465	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300025501\|Ga0208563_1104349	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300025812\|Ga0208457_1107853	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300025906\|Ga0207699_10902686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300027660\|Ga0209736_1161173	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300027667\|Ga0209009_1074500	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300027745\|Ga0209908_10018564	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300027812\|Ga0209656_10062046	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300027825\|Ga0209039_10329244	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300027826\|Ga0209060_10305174	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300027855\|Ga0209693_10542058	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027869\|Ga0209579_10111001	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300027884\|Ga0209275_10215820	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300027889\|Ga0209380_10504660	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300027895\|Ga0209624_10000575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	32473	Open in IMG/M
3300028450\|Ga0189898_1039795	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300028776\|Ga0302303_10247441	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300028798\|Ga0302222_10068364	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300028806\|Ga0302221_10364470	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300028808\|Ga0302228_10149435	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300028866\|Ga0302278_10125172	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300029636\|Ga0222749_10295596	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300030041\|Ga0302274_10530879	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300030618\|Ga0311354_10053751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4671	Open in IMG/M
3300030706\|Ga0310039_10163021	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300031236\|Ga0302324_102002961	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300031238\|Ga0265332_10417996	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031241\|Ga0265325_10212162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300031344\|Ga0265316_10142361	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300031708\|Ga0310686_101516201	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300031715\|Ga0307476_10615297	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300031945\|Ga0310913_10839411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300031954\|Ga0306926_10412383	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300032770\|Ga0335085_11683655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300032783\|Ga0335079_11451015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300032828\|Ga0335080_12115615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300034124\|Ga0370483_0135404	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Host-Associated	Host-Associated	4.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.23%
Aquatic	Environmental → Aquatic	25.96%
Plants	Host-Associated → Plants	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.62%
Freshwater	Environmental → Aquatic → Freshwater	23.08%
Peat	Environmental → Terrestrial → Peat	8.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Sediment	Environmental → Aquatic → Sediment	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.08%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.58%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022728	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028450	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12649J13570_10256861	3300001175	Forest Soil	CLISDRSEFEHIRRQQQLDGEISAEMALQLRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLVEKRTVDARDITTTERIKL*
JGI12712J15308_100579222	3300001471	Forest Soil	PAVDGSLLGVACLISDRSEFERIRRQQQLHCEISAEMALELRTSLTTIAGYAQQLASTRDGDLARQLAADISGEAASLDRRIGGFLAEKSTAAKAGT*
Ga0062389_1017692272	3300004092	Bog Forest Soil	RSEFERIRHQQELHGEISAEMALELRTSLATIAGYAQQLARNRDPELAPQLAADIAGEAARLDRNIGGFLAAKRGTAGMASRASAAGHKI*
Ga0062388_1013416702	3300004635	Bog Forest Soil	DRSEVKRNLRQQELHGEISAEMALELRTSLATIAGYAQQLAKNRDLNVAPQLAEDIASEAARLDHRIGGFLVEKRIPSAPDMRARAAGKV*
Ga0070709_115666011	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SPKGVKRSLQITVSRIPTLDGGLLGIACLINDLSEIEGIRRQQELRGEISAEMALQLRNSLTTIAGFAQQLANNRDPELAKDIATDIAQEAAQLDRTIGGFLTAERAAAHAAK*
Ga0070734_104590812	3300005533	Surface Soil	ISRVPASDGGLLGVACVINDLSELERIRRQQELHGEISAEMALQLRTSLTTISGFAQQLANNRDPDMAKELATDIAQEAAQLDRSIGGFLTAKRPASVAVGHAAK*
Ga0070731_100766951	3300005538	Surface Soil	EADYCTPSGQSRRIALTISQVPSVDGNLIGAACLVSDRTELEQIRRQQELQGEISAEMALELRTSLTTIAEYARQIARNGDPARAPQLAADIASETARLDRHIGGFLAAKGTASGK*
Ga0070731_105578631	3300005538	Surface Soil	SPAGEKRFLRMTISRVPAVDGGLLGVACVINDLSEMERIRQQQELHGEISAEMALQLRTSLTTISGFAQQLANNRDPELAKEIATDIAQEAAQLDRTIGGFLTTRGPASLAIGHVAK*
Ga0070733_108624151	3300005541	Surface Soil	AACLISDRSEFESIRHQQQLHGEISAEMALELRTSLATIAGYAQQLARNRDPELAPELAADIATEAARLDRRIGGFLATERNTEVTATRARAAGNKS*
Ga0070761_103722362	3300005591	Soil	TVSAVPAVDGSLLGVACLVSDRSEFEHIRRQQQLHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSAADSGARASTAGRTT*
Ga0070762_101925021	3300005602	Soil	LHLAVTVSAVPAVDGSLLGVACLIVDRSEFEQIRRQQQLHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLASQFAADIAGEAAGLDRRIGGFLAKKRNAEDAGTRANPATLSKSER*
Ga0070766_106711652	3300005921	Soil	SPVPAVDGSLLGVACLISDRTEFQRSRLQIELQGEISAEMALELRTSLTTIAGYAQQLAANEDPGLAPQLADDIVSEATRLDRHIGGFLAEKCAVLATRAQAASKVL*
Ga0075019_110089832	3300006086	Watersheds	LIDDLSAFEDIRRQQQLQGQISAELALDLRTSLATIAGYAQQLASNRDPDLSRQLAEDISAEAARLDRHIGGFLTGKSSHAITSAAAGGTL*
Ga0075014_1001265911	3300006174	Watersheds	SQVLAVDGSLLGVTCLINDLSELANIRRQQELQGEISAEMALQLRTSLTTISGFAQQLANNRDPEMAEEIATDIAHEAAQLDRTIGGFLTAKRATAGSSH*
Ga0063829_12865152	3300006860	Peatlands Soil	DGGLLGVACLINDLSELERIRRQQQLQGEISAGMALQLRASLATIAGFAQQLANNRDPELAEQLAADIAQEAAQLDRSIGGFLTEKGTAQAAGSRA*
Ga0116225_14982421	3300009524	Peatlands Soil	PAVDGSLLGVACLISDRSEFESIRRQQQLHGEISAEMALQLRTSLTTIAGYAQQLARNHDPDLAAQLAADIAGEAASLDRRIGGFLAEKRNAADAGPRASAAGRTT*
Ga0116116_11971052	3300009621	Peatland	DGSLLGAACLISDRSEFEHIRRQQQLHGEISAEMALELRTSLSTIAGYAQQLARNRDPDLTPQLAADIAGEAASLDRRIGGFLAAKRTVDAGTRANTAARIT*
Ga0116130_12975652	3300009762	Peatland	AVPAVDGSLLGAACLISDRSEFERIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSTADTGTRASAAGKVI*
Ga0126373_110803691	3300010048	Tropical Forest Soil	SGEKRFLRITISRVLAAASGLLGVACVINDLSEMERIRREQELHGEISAEMALQLRSSLTTISGFAQQLANNHDPELAKEIATDIAQEAVQLDRTIGGFLTSKDSSSLAKGHSAK*
Ga0126373_123278421	3300010048	Tropical Forest Soil	TVSQVPAMDGGLLGVTCLINDLSELENIRQQQELQGEISAEMALQLRTSLTTIAGFAQQLANNRDPELAKDLAGDIAQEAAQLDRSIGGFLTAKHALAGSVSK*
Ga0074044_100415101	3300010343	Bog Forest Soil	KRFLAVTVSPIPAEDGGLLGVACLINDLSEREHTRRQQELQGEISAEMALQLRASLTTIAGYAQHLANNRDPELAQQLAADIAHEASDLDRRIGGFLTEKRAAQSAAAGASSRK*
Ga0126370_122672502	3300010358	Tropical Forest Soil	GEKRFLTITVSRVPAADGGLLGVACVINDLSEIERIRRQQEVHREISAEMALQLRTSLTTISGFAQQLANNRDPELAKEIATDIAQQAVQLDRTIGGFLTSKDSSSLAIGHSAK*
Ga0126379_132205592	3300010366	Tropical Forest Soil	FIEVTISPVMATEGALLGVACLINDLSELESIRRQQALLGEISAEMALQLRTSLTTISGFAQQLANNRDPELAKELATDIAHEAAQLDRSIGGFLLAKHSEKKAAAGSRVN*
Ga0126383_108482521	3300010398	Tropical Forest Soil	ADYESPSGEKRFLRMTISRVPAADGGLLGVACVINDLSEMERMRRQQELHGEISAEMALQLRSSLTTISGFAQQLANNRDPELAREIATDIAQEAVQLDRTIGGFLTSKDSSSLALRHSAK*
Ga0138579_11756941	3300011090	Peatlands Soil	GGLLGVACLINDLSELERIRRQQQLQGEISAGMALQLRASLATIAGFAQQLANNRDPELAEQLAADIAQEAAQLDRSIGGFLTEKGTAQAAGSRA*
Ga0164305_107178331	3300012989	Soil	PAGEKRFLRMTISRVPAVDGSLLGVACLINDVSELENIRRQQELQGEISAEMALQLRNSLTTISGFAQQLANSRDAEFAKELATDIAHEAAQLDRTLGGFLTTKRPVGLAAGHSAK*
Ga0181523_103742601	3300014165	Bog	LGAACLINDRSEFEQIRRQEQLHGEISAEMALELRTSLTTIAGYAQHLAQNRNPDLSPQLAADIAEEAANLDRRIGGFLAQKRTPTEVGSRAASAGRTK*
Ga0181535_107400161	3300014199	Bog	EKLHIAVTVSAVPAVDGSLLGAACLISDRSEFEHIRRQQQLHGEISAEMALELRTSLSTIAGYAQQLARNRDPDLTPQLAADIAGEAASLDRRIGGFLAAKRTVDAGTRANTAARIT*
Ga0181526_102135843	3300014200	Bog	AADGSLLGAACLINDRSEFEQIRRQEQLHGEISAEMALELRTSLTTIAGYAQHLAQNRNPDLSPQLAADIAEEAANLDRRIGGFLAQKRTPTEVGSRAASAGRTK*
Ga0182018_107277122	3300014489	Palsa	VPAVDGSVLGAACLISDRSEFERIRHQQQLHGEISAEMALELRTSLATIAGYAQQLARNGDPELAPELAADIANEAARLDRHIGGFLATERTTAVTATRARAAGNKN*
Ga0182024_100966201	3300014501	Permafrost	ISDRSEFEHIRLQQQLHNELSAEMALELRTSLATIAGYAQQLARNREPDLALQLAADIASEAASLDRRIGGFLAEKRSAADSGSRAAAVSRAT*
Ga0167668_10117921	3300015193	Glacier Forefield Soil	EYETPAGEKRFIAVTISPVPAADGGLLGIACLINDRSEMEAMRCQQQLQAELSAEMALQLRTSLTTISGFAGQLASSHDAELAKQLAADIAHEAAQLERNIGGFLTRKDTAQGAAVGSTGN*
Ga0132256_1005303761	3300015372	Arabidopsis Rhizosphere	VPAADGSLLGVACLINDLTEVDSRRRRQELHGEISAEMALQLRTSLTTISGFAQQLANNRDPDMAREIATDIAHEAAQLDRTIGGFLTSKQAAIRQALHIEN*
Ga0132255_1052192541	3300015374	Arabidopsis Rhizosphere	CKRRDVKADYEGPSGQKRTIQVTVSRIPTVDGGLLGVACLINDLSEIEDIRRKQELRGEISAEMALQLRTSLTTIAGFAQQLANNRDPDFAQDLAKDIAQEAAQLDRTIGGFLTAERASAHAAK*
Ga0182034_109076902	3300016371	Soil	GEKRFLSMTISQVPGPDDSLLGVTCLINDLTELESIRRQQELQGEISAEMALQLRTSLTTISGFAQQLAENRDAEMAKEIATDIAHEAAQLDRTIGGFLTRRPMANASSAGSK
Ga0182038_109413651	3300016445	Soil	VPGPDDSLLGVTCLINDLTELESIRRQQELQGEISAEMALQLRTSLTTISGFAQQLAENRDAEMAKEIATDIAHEAAQLDRTIGGFLTRRPMANASSAGSK
Ga0181511_13168941	3300016702	Peatland	AVPAVDGSLLGAACLISDRSEFEHIRRQQQLHGEISAEMALELRTSLSTIAGYAQQLARNRDPDLTPQLAADIAGEAASLDRRIGGFLAAKRTVDAGTRANTAARIT
Ga0181505_106054131	3300016750	Peatland	DYSTPAGEKIRVAVTVSAVPAIDGSLLGAACLISDRSEFEHIRHEQQLQGEISAEMALQLRTSLTTIAGYAQHLARNRDPDLAPQLAADIASEAASLDRRIGGFLAEKRNAPSMDARASAAGRAK
Ga0187802_100588243	3300017822	Freshwater Sediment	GSLLGAACLISDRSEFEQIRVQQQMDGEISAEMALELRTSLATIAGYAQQLARNRDPDLAPQLAADIASEAASLDRRIGGFLVEKRREVGSRAGAASGAS
Ga0187819_101765893	3300017943	Freshwater Sediment	VDGSLLGVACLINDLSELERIRRQQQLQGEISAEMALQLRTSLTTIAGFAQQLANNRDPELAQQLAADIAQEAAQLDRSIGGFLTHERTEQSTARGVGVAH
Ga0187879_1000426610	3300017946	Peatland	CLISDRSEFERIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSTADTGTRASAAGKVM
Ga0187847_101724753	3300017948	Peatland	CLISDRSEFERIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSTADTGTRASAAGKVI
Ga0187817_100279166	3300017955	Freshwater Sediment	AVDGSLLGVTCLINDLSELESIRRQQELQGEISAEMALQLRTSLATIAGFAQQLANNRDPEMAGELASDIAHEAAQLDRTIGGFLTARHAAGAS
Ga0187778_105312831	3300017961	Tropical Peatland	AGEEGLLGVTCLINDLSELEQIRRQQELHGEISAEMALQLRTSLTTIAGYAQQLANNRDPELAKQLAADIAAEAAQLDRSIGGFLTEKRAQSAAAGQSD
Ga0187782_101268901	3300017975	Tropical Peatland	VPGADGNLLGAACLINDLSELESIRRQQAQYGEISAEMALQLRSSLTQIAGYAQQLASTRDPELARQLAADIAEEALRLDRSIGGFLTARRAPHSAGAKAGSVG
Ga0187865_13168462	3300018004	Peatland	RRQQQLHGEISAEMALELRTSLSTIAGYAQQLARNRDPDLAEQLAADIAGEAANLDRRIGGFLAEKRNAVRPNPRASTVGRAT
Ga0187888_10983731	3300018008	Peatland	SLLGVACLIGDRSEFESIRRQQQLHGEISAEMALELRTSLSTIAGYAQQLARNRDPDLAAQLAADIAGEAANLDRRIGGFLAEKRNAVRPNPRASTVGRAT
Ga0187884_101746062	3300018009	Peatland	FEEIRRQQELQGEVSAEMALELRTSLTTIAGYAQQLARTRDPDLAPQLAADIAGEATSLDRRIGGFLAEKQSAADCGTRARAAGRNT
Ga0187885_100309891	3300018025	Peatland	RSEFEHIRHEQQLQGEISAEMALQLRTSLTTIAGYAQHLARNRDPDLAPQLAADIASEAASLDRRIGGFLAEKRNAPSMDARASAAGRAK
Ga0187871_106193071	3300018042	Peatland	RSEFENIRRQQELHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAANLDRRIGGFLAEERSAADSGTRAKAAGRSS
Ga0187859_105254782	3300018047	Peatland	VTVSPVPAVDGSLLGAACLITDLSAFEQIRVQQEMRALELRTSLTTISGYAQQLAKNRDPELAHQLAADIAEEAARLDRSLGGFLTEKSSTGSGTAQAASASQS
Ga0182025_13141931	3300019786	Permafrost	VRTIRLQQQLHNELSAEMALELAHLLGYIAGYANSWARNREPEFWPCNWLPTLASEAASLDRRSGGFLAETPPAADSGSRAAGSEPSHLRC
Ga0210403_113466102	3300020580	Soil	SDFENIRRQQQLHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLASDIANEAASLDRRIGGFLAEKHSTVDSGVRASSASPAT
Ga0210395_102120333	3300020582	Soil	DRSDFENIRRQQQLHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLASDIANEAASLDRRIGGFLAEKHSTVDSGVRASSASPAT
Ga0210388_116884421	3300021181	Soil	CLISDRSEFERVRRQQQMQGEVSAEMALQLRTSLTSIAGYAQQLAHNREPGLASQLAADIANEAASLDRRIGGFLVQKPADSVCTEAKS
Ga0210393_113891342	3300021401	Soil	VDGSLLGVACLVSDRSEFEHIRRQQQLYGELSAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSAADSGARASTAARVT
Ga0210385_105828372	3300021402	Soil	VDGSLLGAACLISDRSEFERIRHQQELHGEISAEMALELRTSLATIAGYAQQLARNRDPELASQLAADIATEASRLDRHIGGFLSDKRSAAAKATRASAAGQNI
Ga0210385_112371921	3300021402	Soil	LLGVACLISDRSDFENIRRQQQLHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLASDIANEAASLDRRIGGFLAEKHSTVDSGVRAGSASPAT
Ga0210390_110341691	3300021474	Soil	CLITDRSEFERLRNQQELHGEISAEMALELRTSLTTISGYAQQLARNQDPDLAPQLAADIANEAARLDRNIGGFLAAKPPTAERATRASAAGRDI
Ga0210392_107445671	3300021475	Soil	SAVPSIDGSLLGVACLISDRSDFENIRRQQQLHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLASDIANEAASLDRRIGGFLAEKHSTVDSGVRASSASPAT
Ga0210398_111728412	3300021477	Soil	AVTVSPVPAVDGSLLGAACLITDLSAFEQIRVQQEMRALELRTSLTTISGYAQQLARNRDPELAQQLAADIAQEAVRLDRSVGGFLTEKSGISGGTAQAASASKS
Ga0224548_10423481	3300022518	Soil	IAVTVSAIPALDSSLLGVACLINDRTEMDEIRRQQELQGEISAEMALQLRTSLTTIYGYAQQLASSRDPELARQLAIDIAHEAAQLDHSIGGFLSKKRAAHAAAVGTD
Ga0212123_106828211	3300022557	Iron-Sulfur Acid Spring	PAVDGGLLGAACLINDRTEMEEMRRQQELQTELSAEMALQLRNSLTTISGYALQLADSRDADLAKQLAIDIAHEAAQLDHSIGGFLNRKHAAQGAAAGSTF
Ga0224566_1013421	3300022728	Plant Litter	EFEEIRRQQELQGEISAEMALQLRTSLATIAGYAQQLSRNTDPTLAPQLAADIASEAAGLDRRMGGFLTEKRNAFGASVHASAVGRAV
Ga0224563_10262222	3300022731	Soil	ACLISDRSEFEQIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAERRSAARTGARANAAGKVI
Ga0224562_10058062	3300022733	Soil	AGEKLHIAVTVSAVPAVDGSLLGAACLISDRSEFEQIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAERRSAARTGARASAAGKVI
Ga0224560_1020421	3300023019	Soil	DGSLLGAACLISDRSEFEQIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAERRSAARTGARASAAGKVI
Ga0224564_10744651	3300024271	Soil	VTVSAVPAVDGSLLGAACLISDRSEFEQIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAERRSAARTGARASAAGKVI
Ga0208563_11043492	3300025501	Peatland	FESIRRQQQLHGEISAEMALELRTSLSTIAGYAQQLARNRDPDLAEQLAADIAGEAANLDRRIGGFLAEKRNAVRPNPRASTVGRAT
Ga0208457_11078532	3300025812	Peatland	DGSLLGAACLISDRSEFEHIRRQQQLHGEISAEMALELRTSLSTIAGYAQQLARNRDPDLTPQLAADIAGEAASLDRRIGGFLAAKRTVDAGTRANTAARIT
Ga0207699_109026862	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	NKRSLSMTISQVPAADGGLLGVTCLINDLTELDNIRRQQELHGEISAEMALQLRTSLTTISGFAQQLANNRDPEMAKEIATDIAHEAAQLDRTIGGFLTSKQAAAKKGASH
Ga0209736_11611731	3300027660	Forest Soil	PTGQKRFITVTISAVPAVDGSLLGVACVINDRSEVEEIRSQQQMQAEISTEMALRLRNSLTTISGYAVQLANSHDADLAKQLATDIAHEAAQLDHNIGGFLTRKRSPRGVAVGSAV
Ga0209009_10745001	3300027667	Forest Soil	VPAVDGSLLGVACLIIDRSEFEQIRRQQQLHVELSAEMALELRTSLTTIAGYAQQLARNRDPDLASQLAADIAGEAAGLDRRIGGFLAKKRNAEEAGTRANAATLSKRER
Ga0209908_100185641	3300027745	Thawing Permafrost	VPAVDGTLLGAACLVSDRSEFEQIRRQQELQGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAAQLAADIAGEAASLDRRIGGFLAEKRSSADAGARASTEAKVT
Ga0209656_100620464	3300027812	Bog Forest Soil	TVSPVPAADGSLLAVACLINDLSELEDIRRQQAQRGEISAEMALRLRTSLTSISNYAQALAAAGEPAEARQLAADIAHEAEDLDRSIGGFLTGKCAGVASGVASVD
Ga0209039_103292441	3300027825	Bog Forest Soil	SAIPAVDGSLLGVACLISDRTEFERIRDQQQLQGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAANLDRRIGGFLVEKRNAVRVEPRASTAGRAI
Ga0209060_103051742	3300027826	Surface Soil	ISRVPASDGGLLGVACVINDLSELERIRRQQELHGEISAEMALQLRTSLTTISGFAQQLANNRDPDMAKELATDIAQEAAQLDRSIGGFLTAKRPASVAVGHAAK
Ga0209693_105420582	3300027855	Soil	VPAVDGNLLGAACLITDLSAFEQIRVQQEMRALELRTSLTTISGYAQQLARNRDPELAQQLAADIAQEAVRLDRSVGGFLTEKSGIGGGTAQAASASKS
Ga0209579_101110011	3300027869	Surface Soil	LTISQVPSVDGNLIGAACLVSDRTELEQIRRQQELQGEISAEMALELRTSLTTIAEYARQIARNGDPARAPQLAADIASETARLDRHIGGFLAAKGTASGK
Ga0209275_102158202	3300027884	Soil	GQKLHLAVTLSPIPCVDGSLLGMACLISDRSEFERVRRQQQMQGEVSAEMALQLRTSLTSIAGYAQQLAHNREPGLASQLAADIANEAASLDRRIGGFLVQKPADSVCTEAKS
Ga0209380_105046602	3300027889	Soil	SPVPAVDGSLLGVACLISDRTEFQRSRLQIELQGEISAEMALELRTSLTTIAGYAQQLAANEDPGLAPQLADDIVSEATRLDRHIGGFLAEKCAVLATRAQAASKVL
Ga0209624_100005751	3300027895	Forest Soil	VPAVDGSLLGVTCLINDLSEFEKIRRQQELHGELSAEMALQLRVSLTTIAGYAQQLANNRDPELAQQIAIDIAQEAAQLERSLGGFLMAKPAAQKSAAAAAGR
Ga0189898_10397952	3300028450	Peatlands Soil	DGGLLGVACLINDLSELERIRRQQQLQGEISAGMALQLRASLATIAGFAQQLANNRDPELAEQLAADIAQEAAQLDRSIGGFLTEKGTAQAAGSRA
Ga0302303_102474411	3300028776	Palsa	ISDRSEFERIRSQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLASQLAADIAGEAASLDRRIGGFLAEKRSVADGVRASAAGKVI
Ga0302222_100683641	3300028798	Palsa	RSEFQRSRRQLELQSEISAEMALELRTSLTTIAGFAQQLAKNRDPDLALQLADDIAGEAARLDRRFGGFLAEKHTATVPGARAQAATKVT
Ga0302221_103644701	3300028806	Palsa	GEELRIAVTISPVPAVDGSLIGVACLISDRSEFQRSRRQLELQSEISAEMALELRTSLTTIAGFAQQLAKNRDPDLALQLADDIAGEAARLDRRFGGFLAEKHTATVPGARAQAATKVT
Ga0302228_101494352	3300028808	Palsa	LISDRSEFERIRHEQELHGEVSAEMALELRTSLATISGYAQQLARNRDPELAPALAADIAAEASRLDRHIGGFLIAKDAAKSAGTATHANAAGKVV
Ga0302278_101251721	3300028866	Bog	KLHIAVTVSAVPAVDGSLLGAACLISDRSEFERIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSTADTGTRASAAGKVI
Ga0222749_102955962	3300029636	Soil	VPAVDGSLLGVACLIIDRSEFEQIRRQQQLHGELSAEMALELRTSLTTIAGYAQQLARNRDPDLASQLAADIAGEAAGLDRRIGGFLAKKRNAADAGTRINAATLSKSER
Ga0302274_105308791	3300030041	Bog	AVPAVDGSLLGAACLISDRSEFERIRRQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSTADTGTRASAAGKVI
Ga0311354_100537518	3300030618	Palsa	AVDGSLLGAACLISDRSEFERIRSQQQLHGEISAEMALELRTSLTTIAGYAQQLARNRDPDLASQLAADIAGEAASLDRRIGGFLAEKRSVADGVRASAAGKVI
Ga0310039_101630211	3300030706	Peatlands Soil	SEFESIRRQQQLHGEISAEMALQLRTSLTTIAGYAQQLARNHDPDLAAQLAADIAGEAASLDRRIGGFLAEKRNAADAGPRASAAGRTT
Ga0302324_1020029611	3300031236	Palsa	EKLRIAVTVSAVPAVDGTLLGAACLVSDRSEFEQIRRQQELQGEISAEMALELRTSLTTIAGYAQQLARNRDPDLAAQLAADIAGEAASLDRRIGGFLAEKRSSADAGARASTEAKVT
Ga0265332_104179962	3300031238	Rhizosphere	ADYEGPTGQKRTIQVIVSRIPAVDGGLIGVACLISDLSEIEDIRRKQELRGEISAEMALQLRTSLTTIAGFAQQLANNRDPEFAQDLAKDIAQEAAQLDRTIGGFLTAERAAAQAAK
Ga0265325_102121621	3300031241	Rhizosphere	EKRFIAVTVSPVPAAGGGLLGVTCLINDLSELEQIRRQQELHGEISAEMALQLRTSLTTISGFAQQLANSRDAEHSLQLASDIAHEAAQLDRSIGGFLTTKRAAQGVAAGSSAD
Ga0265316_101423613	3300031344	Rhizosphere	RFIAVTVSPVPAAGGGLLGVTCLINDLSELEQIRRQQELHGEISAEMALQLRTSLTTISGFAQQLANSRDAEHSLQLASDIAHEAAQLDRSIGGFLTTKRAAQGVAAGSSAD
Ga0310686_1015162014	3300031708	Soil	PAVDGSLLGAACLISDRSEFEEIWRQQESHGEVSAEMALALRTSLTTIAGYAQQLARNRDPDLAPQLAADIAGEAASLDRRIGGFLAEKRSVARTGNQMSVAAGKVIQ
Ga0307476_106152971	3300031715	Hardwood Forest Soil	LRMTISRVPAADGGLLGVACVINDLSELEHIRQQRELHGEISAEMALQLRSSLTTISGFAQQLANNRDPELAKDLATDIAQEAAQLDRTIGGFLTAKDPANLAKGHAAK
Ga0310913_108394112	3300031945	Soil	LIEADYKAPSGEKRFLSMTISQVPGPDDSLLGVTCLINDLTELESIRRQQELQGEISAEMALQLRTSLTTISGFAQQLAENRDAEMAKEIATDIAHEAAQLDRTIGGFLTRRPMANASSAGSK
Ga0306926_104123833	3300031954	Soil	DYKAPSGEKRFLSMTISQVPGPDDSLLGVTCLINDLTELESIRRQQELQGEISAEMALQLRTSLTTISGFAQQLAENRDAEMAKEIATDIAHEAAQLDRTIGGFLTRRPMANASSAGSK
Ga0335085_116836552	3300032770	Soil	RFLSMTISRVPTADGSLLGVTCLINDLSELESIRRQQALQGEISAEMALQLRTSLTTISGFAQQLANNRDPELAKELATDIAHEAAQLDRSIGGFLLAKHAEKKAMAGGSLK
Ga0335079_114510152	3300032783	Soil	GYETPAGEKRFLSITVSQVPAPDDSLLGVTCVINDLSELESIRRQQELQGELSAEMALQLRTSLTTIAGFAQQLANNRDPELAKDLATDIAQEAAQLDRSIGGFLTAKRQSASAASSTAK
Ga0335080_121156152	3300032828	Soil	RVPTADGSLLGVTCLINDLSDRESIRRQLALQGEISADMALQLRTSLTTISGFAQQLANNRDPELAKELATDIAHEAAQLDRSIGGFLLAKHAEKKAMAGGSLK
Ga0370483_0135404_505_789	3300034124	Untreated Peat Soil	LISDRTEFEQIRRQQQLQGEISAEMALELRTSLTMIAGYAQQLARNSAPDLLPQLAADIASEAASLDRRMGEFLAEKQTSAQSIVRPSKATHAI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097857

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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