Metagenome / Metatranscriptome Family F097859

Basic Information
Family ID	F097859
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	44 residues
Representative Sequence	MPFLLGVVVLILLLWAANAFSKADPKQAAKLLRYIGGGAAL
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.96 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	94.23 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (71.154 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (25.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.654 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.62% β-sheet: 0.00% Coil/Unstructured: 46.38%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF09140	MipZ	9.62
PF02569	Pantoate_ligase	1.92
PF00781	DAGK_cat	0.96
PF00291	PALP	0.96
PF13458	Peripla_BP_6	0.96
PF13519	VWA_2	0.96
PF01435	Peptidase_M48	0.96
PF03466	LysR_substrate	0.96
PF02673	BacA	0.96
PF00226	DnaJ	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	9.62
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	1.92
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.92
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.15 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.81 %
Unclassified	root	N/A	28.85 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.85 %
Unclassified	root	N/A	28.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22.12 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.85 %
Lichenihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenihabitantaceae	0.96 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.85 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	0.96 %
Lichenihabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenihabitantaceae → Lichenihabitans	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	3.85 %
Lichenihabitans psoromatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenihabitantaceae → Lichenihabitans → Lichenihabitans psoromatis	0.96 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.85 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3.85 %
Lichenihabitans psoromatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenihabitantaceae → Lichenihabitans → Lichenihabitans psoromatis	0.96 %
Burkholderiales bacterium 21-58-4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig26800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1113	Open in IMG/M
3300002245\|JGIcombinedJ26739_101209711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300004635\|Ga0062388_100460311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1126	Open in IMG/M
3300005332\|Ga0066388_104232223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300005347\|Ga0070668_102119524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300006174\|Ga0075014_100105025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1322	Open in IMG/M
3300006175\|Ga0070712_101968660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300006576\|Ga0074047_12038640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300009101\|Ga0105247_11422794	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300009522\|Ga0116218_1113418	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300009524\|Ga0116225_1238955	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300009672\|Ga0116215_1154774	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300009683\|Ga0116224_10560909	Not Available	545	Open in IMG/M
3300010343\|Ga0074044_10648257	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300010362\|Ga0126377_12948044	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300010362\|Ga0126377_13167279	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010373\|Ga0134128_10108425	Not Available	3154	Open in IMG/M
3300010376\|Ga0126381_100375630	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300010376\|Ga0126381_102651228	Not Available	717	Open in IMG/M
3300010379\|Ga0136449_103700965	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010401\|Ga0134121_12098584	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300014164\|Ga0181532_10138342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1477	Open in IMG/M
3300014199\|Ga0181535_10248755	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300014200\|Ga0181526_10105286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1803	Open in IMG/M
3300014654\|Ga0181525_10695487	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300014657\|Ga0181522_11018425	Not Available	513	Open in IMG/M
3300015371\|Ga0132258_11314870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1827	Open in IMG/M
3300016341\|Ga0182035_10938450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	765	Open in IMG/M
3300016445\|Ga0182038_10859456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300017823\|Ga0187818_10148952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Lichenihabitantaceae → Lichenihabitans → Lichenihabitans psoromatis	1018	Open in IMG/M
3300017933\|Ga0187801_10096177	Not Available	1121	Open in IMG/M
3300017943\|Ga0187819_10710611	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300017955\|Ga0187817_10066261	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300017970\|Ga0187783_11225798	Not Available	540	Open in IMG/M
3300017972\|Ga0187781_10359633	Not Available	1037	Open in IMG/M
3300017972\|Ga0187781_10963763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	623	Open in IMG/M
3300017974\|Ga0187777_11446155	Not Available	508	Open in IMG/M
3300017975\|Ga0187782_11262057	Not Available	579	Open in IMG/M
3300018001\|Ga0187815_10293582	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300018037\|Ga0187883_10253074	Not Available	901	Open in IMG/M
3300018060\|Ga0187765_10409148	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300018060\|Ga0187765_11015501	Not Available	570	Open in IMG/M
3300018062\|Ga0187784_10067729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2895	Open in IMG/M
3300018085\|Ga0187772_10648648	Not Available	754	Open in IMG/M
3300018090\|Ga0187770_11118573	Not Available	636	Open in IMG/M
3300020583\|Ga0210401_11038464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	678	Open in IMG/M
3300020583\|Ga0210401_11532116	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300021171\|Ga0210405_10910192	Not Available	668	Open in IMG/M
3300021384\|Ga0213876_10076162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1772	Open in IMG/M
3300021401\|Ga0210393_10954367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	695	Open in IMG/M
3300021403\|Ga0210397_10457624	Not Available	961	Open in IMG/M
3300021404\|Ga0210389_10104189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2186	Open in IMG/M
3300021420\|Ga0210394_11668246	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300021433\|Ga0210391_10897360	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300023088\|Ga0224555_1125425	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300023259\|Ga0224551_1044863	Not Available	769	Open in IMG/M
3300024225\|Ga0224572_1074823	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300025633\|Ga0208480_1011962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2756	Open in IMG/M
3300025903\|Ga0207680_10733125	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300025916\|Ga0207663_11152175	Not Available	624	Open in IMG/M
3300025936\|Ga0207670_10489605	Not Available	997	Open in IMG/M
3300027080\|Ga0208237_1012842	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300027432\|Ga0209421_1085076	Not Available	643	Open in IMG/M
3300027652\|Ga0209007_1173631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	531	Open in IMG/M
3300027660\|Ga0209736_1154250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 21-58-4	609	Open in IMG/M
3300027696\|Ga0208696_1254741	Not Available	544	Open in IMG/M
3300027795\|Ga0209139_10070080	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300027825\|Ga0209039_10263381	Not Available	685	Open in IMG/M
3300027854\|Ga0209517_10696105	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300027889\|Ga0209380_10463540	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300028906\|Ga0308309_11570540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	561	Open in IMG/M
3300030007\|Ga0311338_11629157	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300030057\|Ga0302176_10302231	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300030494\|Ga0310037_10211797	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300030677\|Ga0302317_10369672	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031524\|Ga0302320_11232028	Not Available	763	Open in IMG/M
3300031544\|Ga0318534_10568854	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031708\|Ga0310686_111895305	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300031715\|Ga0307476_11188141	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031724\|Ga0318500_10489386	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031744\|Ga0306918_11094072	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031771\|Ga0318546_11331827	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031781\|Ga0318547_10838987	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031833\|Ga0310917_10609991	Not Available	741	Open in IMG/M
3300031833\|Ga0310917_10653641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300031879\|Ga0306919_10716174	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300031879\|Ga0306919_11185070	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031910\|Ga0306923_11954749	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031912\|Ga0306921_11584009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300031942\|Ga0310916_10805873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	791	Open in IMG/M
3300031954\|Ga0306926_12589455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300031981\|Ga0318531_10361516	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300032076\|Ga0306924_10649153	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300032160\|Ga0311301_13005869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	507	Open in IMG/M
3300032180\|Ga0307471_102693315	Not Available	631	Open in IMG/M
3300032261\|Ga0306920_101268011	Not Available	1062	Open in IMG/M
3300032770\|Ga0335085_12432364	Not Available	521	Open in IMG/M
3300032783\|Ga0335079_11115743	Not Available	798	Open in IMG/M
3300032828\|Ga0335080_10087124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3464	Open in IMG/M
3300032828\|Ga0335080_11151466	Not Available	782	Open in IMG/M
3300032892\|Ga0335081_10630490	Not Available	1316	Open in IMG/M
3300032893\|Ga0335069_10462213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1478	Open in IMG/M
3300033407\|Ga0214472_11240558	Not Available	648	Open in IMG/M
3300034163\|Ga0370515_0161425	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	5.77%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.85%
Aquatic	Environmental → Aquatic	14.42%
Plants	Host-Associated → Plants	5.77%
Modeled	Engineered → Modeled	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.08%
Freshwater	Environmental → Aquatic → Freshwater	13.46%
Peat	Environmental → Terrestrial → Peat	5.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Sediment	Environmental → Aquatic → Sediment	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Roots	Host-Associated → Plants → Roots	0.96%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.46%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0800.00002030	2166559005	Simulated	MPALVLGVIVLILLLFAAYSFSKADPKQAVRVLRYIGGGAVLLFAVFLLFAVQSCRRFRL
JGIcombinedJ26739_1012097111	3300002245	Forest Soil	MPALLLGVVVLILLLWAVNAFSKADPKQAVRLLRYLGGGGALMLAA
Ga0062388_1004603112	3300004635	Bog Forest Soil	MPFILGVAILILLLWAGNAFSKADPKQAARLLRTLGGGAA
Ga0066388_1042322232	3300005332	Tropical Forest Soil	MPALALGVIVLILLLFAAYSFSKADPKQVARVLRYIGGAVALLFAIF
Ga0070668_1021195242	3300005347	Switchgrass Rhizosphere	MPALVLGVIVLILLLFAAYSFSKADPKNVVRVLQYIGGGA
Ga0075014_1001050251	3300006174	Watersheds	MPFLLGVVVLVLLLWAVKAFSKADPKQAARLIRSMG
Ga0070712_1019686602	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPALVLGVIVLILLLFAAHSFSKADPKQAVRVLRYIGGGA
Ga0074047_120386402	3300006576	Soil	MPFLLGVVALVLLLWAVKAFSKADPKQAARLIRSM
Ga0105247_114227942	3300009101	Switchgrass Rhizosphere	MPALILGVIVLSLLLFAAYSFSKADPKQVVRVVRYIGGGAALLFAVFLLVRGAIVPAV
Ga0116218_11134181	3300009522	Peatlands Soil	MPALLLGVVVLILLLFAGYSFSKADPKQAVRVLRYIGGGAALLFAV
Ga0116225_12389551	3300009524	Peatlands Soil	MPLLLGVAVLILLLWAVNAFSKADPKQAARLIRYLG
Ga0116215_11547742	3300009672	Peatlands Soil	MPALLLGVVVLILLLFAGYSFSKADPKQAVRVLRYIGGGAALLFAVFLLVRGAIGP
Ga0116224_105609092	3300009683	Peatlands Soil	MPEILLGVVVLVLGLWAVNAFSKADPKQAARVLRAIGGG
Ga0074044_106482571	3300010343	Bog Forest Soil	MPIILGVAVLILLLWAASAFSKADPKQAARLLRAIGGVGALLFAVF
Ga0126377_129480442	3300010362	Tropical Forest Soil	MPALVLGLVVLVLLFFAAKWFSKADPKQAARALRYVGGGAALLLAVFLLARG*
Ga0126377_131672792	3300010362	Tropical Forest Soil	MPALVLGVIVLILLLFAAYSFSKADPKQLALVLRYIGGGAALLFAIFL
Ga0134128_101084251	3300010373	Terrestrial Soil	MPFLLGVVVLLLLLWAMKAFAKADPKQAARLVRQIGGVAALLL
Ga0126381_1003756301	3300010376	Tropical Forest Soil	MPALFLGLVILVLLFFAAKWFSKADPKQAARVLRYLGG
Ga0126381_1026512281	3300010376	Tropical Forest Soil	MPEILLGLVVLLLLMWAASAFSKADPKQAARVVRAIGGGAAL
Ga0136449_1037009652	3300010379	Peatlands Soil	MPALLLGVVGLVLLFFAVKWFSKADPKQAARVLRYVGGGAALLLAGFLL
Ga0134121_120985841	3300010401	Terrestrial Soil	MPALVLGVIVLILLLFAAYSFSKADPKQAVRVLRYIGGGAA
Ga0181532_101383423	3300014164	Bog	MPEILLGVVVLVLGLWAVNAFSKADPKQAARVLRAIGGGAA
Ga0181535_102487553	3300014199	Bog	MPEILLGIVVLILGLWAVNAFSKADPKQAARLLRALGGGAA
Ga0181526_101052863	3300014200	Bog	MPFIFGVAVLILLLRAVNAFSKADPKQAARLLRVI
Ga0181525_106954871	3300014654	Bog	MPEIILGAAVLFLGLWAVNAFSKADPKQAARVLRGI
Ga0181522_110184251	3300014657	Bog	MPEILLGAAVLVLGLWAMNAFSKADPKRAARVVRGVGGVALVIF
Ga0132258_113148701	3300015371	Arabidopsis Rhizosphere	MPFLLGVVVLLLLLWAIKAFAKADPKQAARLVRQIGG
Ga0182035_109384501	3300016341	Soil	MIALILGIFVLILLLFAAKSFSSADPKQVARVLRYIGGGVTLLFAVFLLVRGQI
Ga0182038_108594561	3300016445	Soil	MVALILGVVVLILLLFATKSFSSADPKQVARALRYIAGGVTLLFAVFLLVRGQIGPAISVGLLGLGVLGY
Ga0187818_101489522	3300017823	Freshwater Sediment	MPTLFLGLVVLVLLFLAAKWFSKADSKQSARVLRYVGG
Ga0187801_100961771	3300017933	Freshwater Sediment	MPALVLGVIVLILLLFAAYSFSKADPKQAVRVLRYIGGPHHILD
Ga0187819_107106111	3300017943	Freshwater Sediment	MPALVLGVTVLILLLFAAYSFSKADPKQAVRVLRYIGG
Ga0187817_100662611	3300017955	Freshwater Sediment	MPTLFLGLVVLVLLFLAAKWFSKADSKQSARVLRYVG
Ga0187783_112257981	3300017970	Tropical Peatland	MPLILGVVVLILLLWAASAFAKADPKQAARLLRLIGGGAALLFAAFLAF
Ga0187781_103596332	3300017972	Tropical Peatland	MPEILLGLVVLLLLMWAASAFSKADPKQAARILRAIG
Ga0187781_109637631	3300017972	Tropical Peatland	MPLLLGVVVLILLLWAVNAFSKADPRQAALLLRYVGGGAALL
Ga0187777_114461551	3300017974	Tropical Peatland	MPEILLGLVVLLLLMWAANAFSKADPKQAARILRAIGGG
Ga0187782_112620571	3300017975	Tropical Peatland	MPLVLGAAVLILLLWAVSAFSKADPKQAARLLRALGGVGALIF
Ga0187815_102935821	3300018001	Freshwater Sediment	MPEILLGLVVLLLLMWAANAFAKADPKQAARILRAIGGAAALVLA
Ga0187883_102530741	3300018037	Peatland	MPEILLGVVVLVLGLWAVNSFSRADPKQAARVLRAIGGAGALIFAG
Ga0187765_104091482	3300018060	Tropical Peatland	MPAFALGIIVLILLLFAAYSFSKADPKQLARVLRYLGGGAALLF
Ga0187765_110155011	3300018060	Tropical Peatland	MAFLLGVAVLILLVWAASSFSKSDPKQAARLVRGAGGVGAL
Ga0187784_100677294	3300018062	Tropical Peatland	MPFLLGVAVLILLLWAVNAFSKADPKQAARLLRAMGGGAALLFA
Ga0187772_106486482	3300018085	Tropical Peatland	MPEILLGVVVLLLLLWAVNSFSKADPKQAARVLRMIGGG
Ga0187770_111185731	3300018090	Tropical Peatland	MPEILLGIVVLILGLWAVNAFSKADPKQAARLLRALGGGAALLLAPEPTTASK
Ga0210401_110384642	3300020583	Soil	MPLLLGVAVLILLLWAVNAFSKADPKQAARLIRYLGGC
Ga0210401_115321162	3300020583	Soil	MPLLLGVAVLILLLWAAKAFSKADPKQAARLIRYMGGCGA
Ga0210405_109101922	3300021171	Soil	MPALFLGLVVLVLLFFAAKWFSKADPKQAARVLRYIG
Ga0213876_100761621	3300021384	Plant Roots	MPFLLGVVVLLLLLWAINAFAKADPKQAARLIRSIGG
Ga0210393_109543671	3300021401	Soil	MPFLLGVVILLLLLWLGHSFTKADPKQVAKLIRRMGGGGALIFAAFLLLRGEIAV
Ga0210397_104576242	3300021403	Soil	MPALALGLIVLILLLFAAYSFSKADPKQAARVLRYIGGGAALLFAIFLLIRGAIMPAGA
Ga0210389_101041891	3300021404	Soil	MPALALGLIVLILLLFAAYSFSKADPKQAARVLRYIGGGTALLFAIFLLIRG
Ga0210394_116682461	3300021420	Soil	MPILLGAAVLILLLWAGSAFSKADPKQAARLVRYIGGGAALIASA
Ga0210391_108973602	3300021433	Soil	MPEIILGVVVLFLVLWGVNAFSKIDPKQAARLVRALG
Ga0224555_11254252	3300023088	Soil	MPFLLGVVVLILLLWAANAFSKADPKQAAKLLRYIGGGAAL
Ga0224551_10448632	3300023259	Soil	MPEILLGVVVLLLALWAVNAFSKADPKQAARMLRAIGGGAALIFAV
Ga0224572_10748232	3300024225	Rhizosphere	MLAFALGVIVLVLLLFAAYSFSKADPKQAVRVLRYIGGGAALLFAVFLLVD
Ga0208480_10119625	3300025633	Arctic Peat Soil	MPILLGVVVLVLLLWAGKSFSKADPKQAAKLLRTLGGGAALLFATF
Ga0207680_107331251	3300025903	Switchgrass Rhizosphere	MPFLLGVVVLLLLLWAIKAFAKADPKQAARLVRQIGGVAALLL
Ga0207663_111521752	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MALLLGVAVLVLLVWAAKSFAKSDPKQAAKLMRSLGGGAALLF
Ga0207670_104896052	3300025936	Switchgrass Rhizosphere	MPFLLGVVVLLLLLWAIKAFAKADPKQAARLVRQIGGVAALLLGA
Ga0208237_10128423	3300027080	Forest Soil	MPEILLGVVVLVLGLWAVNSFSKADPKQAARILRAIGGAAAL
Ga0209421_10850761	3300027432	Forest Soil	MPEILLGVVVLVLGLWAVNSFSKADPKQAARILRAIGGAAALIFA
Ga0209007_11736312	3300027652	Forest Soil	MPEIILGVVVLFLVLWGVNAFSKIDPKQAARLVRALGGVAAVLFAG
Ga0209736_11542503	3300027660	Forest Soil	MPAFVLGVIVLVLLLFAAYSFSKADPKQAVRVLRYMGGGAALLFALFLLVR
Ga0208696_12547411	3300027696	Peatlands Soil	MPEILLGVVVLVLGLWAVNAFSKADPKQAARVLRAIGGGG
Ga0209139_100700803	3300027795	Bog Forest Soil	MPIILGVAVLILLLWAASAFSKADPKQAARLLRAIGGVGALLFA
Ga0209039_102633812	3300027825	Bog Forest Soil	MPTLVLGVIVLILLLFAAYAFSKADPKQAARVLRYIGGGAALLLAL
Ga0209517_106961052	3300027854	Peatlands Soil	MPLLLGVAVLILLLWAANSFSKADPKQAARLLHLL
Ga0209380_104635401	3300027889	Soil	MPALALGLIVLILLLFAAYSFSKADPKQAARVSRYIGGGAALLFAIFLLIRGAIMP
Ga0308309_115705402	3300028906	Soil	MPEILLGVAVLILALWAVNAFSKLDPKLAARVLRGLGGGAALLFAAFLLFR
Ga0311338_116291572	3300030007	Palsa	MPEIILGVVVLFLVLWGGNAFSKIDPKQAARLVRALGGVAAV
Ga0302176_103022311	3300030057	Palsa	MPILLGAAVLILLLWAGSAFSKADPKQAARLVRYIGGGA
Ga0310037_102117971	3300030494	Peatlands Soil	MPFLLGVVVLVLLLWAVKAFSKADPKQAARLIRSMGGIA
Ga0302317_103696721	3300030677	Palsa	MPILLGAAVLILLLWAGSAFSKADPKQAARFVRYIGGGAALIASAFLLLK
Ga0302320_112320282	3300031524	Bog	MPEILLGIVVLVLGLWAVNAFSRADPKQAARLLRALGGGAALLFAAF
Ga0318534_105688542	3300031544	Soil	MPLLLGVVVLILLLWAAQAFSKADPKQAARLLRALGGGGAL
Ga0310686_1118953052	3300031708	Soil	MPILLGVVVLVLLLWAGKSFSKADPKQAAKLLRTLGGG
Ga0307476_111881412	3300031715	Hardwood Forest Soil	MPALFLGLVVLVLLFFAAKWFSKADPMQAARVLRYLPP
Ga0318500_104893861	3300031724	Soil	MPALFLGLVIFVLLFFAAKWFSKADPKQAARVLRYLGGGAALLLA
Ga0306918_110940722	3300031744	Soil	MVALILGVVVLILLLFATKSFSSADPKQVARALRYIAGGVTLLFAVFL
Ga0318546_113318272	3300031771	Soil	MPALFLGLVVLVLLFFAAKWFSKADPKQAARALRYVG
Ga0318547_108389872	3300031781	Soil	MAAFALGVIVLVLLLLAAYSFSKADPKQVARVLRYVGGGAALLFAA
Ga0310917_106099913	3300031833	Soil	MPALVLGVIVLILLLFAAYSFSKADPKQAARVLRYIG
Ga0310917_106536412	3300031833	Soil	MVALILGIVVLILLLFAAKSFSSADPKQVARVLRYIGGGVTLLFGVFLL
Ga0306919_107161742	3300031879	Soil	MVALILGIVVLILLLFAAKSFSSADPKQVARVLRYIGGGVTLLF
Ga0306919_111850701	3300031879	Soil	MPALALGILVLILLLFAAYSFSKADPQQLARVLRYIGGGVTLLFAIFLLVRGAIVPALSIGLIGLGLLG
Ga0306923_119547492	3300031910	Soil	MPALALGVIVLILLLFAVYSFSKADPKQVARVLRYIGG
Ga0306921_115840092	3300031912	Soil	MVALILGILVLILLLFAAKSFSSADPKQVARVLRYIGGGVTLLFGVFL
Ga0310916_108058731	3300031942	Soil	MVALILGIVILILLLFAAKSFSGADPKQVARVLRYIGGGVTLLFGVFLLVRGQIGPAISI
Ga0306926_125894552	3300031954	Soil	MPFLLGVAVLILLLWAADAFSKVDPKLAAPQPRVIGGILALLFAVLLLARGE
Ga0318531_103615162	3300031981	Soil	MPALFLGLVILVLLFFAAKWFSKADPKQAARALRY
Ga0306924_106491531	3300032076	Soil	MPALFLGLVVLVLLFFAAKWFSKADPKQAARVLRYVGG
Ga0311301_130058692	3300032160	Peatlands Soil	MPFLLGVVVLILLLWAVNAFSKSDPKQAARLLRFMGGGAALIFAVFLL
Ga0307471_1026933152	3300032180	Hardwood Forest Soil	MPEIILGVAALVLVLWAVNAFSKADPKQAARLLRAMGGVAALIFA
Ga0306920_1012680111	3300032261	Soil	MVALILGIVVLILLLFAAKSFSGADPKQVARVLRY
Ga0335085_124323642	3300032770	Soil	MPLLLGVVVLILLLWAANSFSRADPKQAAKLLRSLGGGVAVLFAVF
Ga0335079_111157432	3300032783	Soil	MPLLLGVVVLVLLLVAVGGFSKADPKQTARLVRLLGGA
Ga0335080_100871241	3300032828	Soil	MAFLLGVAVLILLVWAASSFSKADPRQAARLVRGAGGVAALIFAGFLL
Ga0335080_111514662	3300032828	Soil	MPEILLGVVVLILVLWAVNAFSKIDPKIAARVLRAVGG
Ga0335081_106304903	3300032892	Soil	MLAFVLGVIVLILLLFAAYSFSKADAKQAARVLRYVGAGTAL
Ga0335069_104622133	3300032893	Soil	MPFLLGVVVLLLLLWLGHSFTKADPKQVAKLIRRMGGG
Ga0214472_112405582	3300033407	Soil	MPTLLLGVLIFILLLWAIKSFSKADPKQLATVLKALGGV
Ga0370515_0161425_826_960	3300034163	Untreated Peat Soil	MPFLLGVVVLILLLWAGNAFSKADPKQAAKLLRYIGGGAALIFAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097859

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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